cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK109604     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0108800 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 466286 -  467753  ( + ) ;   1468(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 466286 -  467753 ( + ) ;   1468 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os07g0108800 Os07t0108800-01 002137F01 112458 002137F01 18816 LOC_Os07g01810.1 AK109604 27536 AP008213.2 255677434 BAF20633.1 113610255 NC_008400.2 297607852 NM_001065254.1 115470240 NP_001058719.1 115470241 Q8LIN5 KCO2_ORYSJ


Chromosome: 7 ,  position: 466,286 - 467,753 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aatccaacac agacacacct ctatctcctt tgtttctgtt cccaatttct atttcacaca 
000061 catcgatgat cgatcgatcg ctgcacctct gaatcttagc tcaaattcca cctcaattat 
000121 caccaaatca atggcggccc tcgaccaaca accgctgctt cacgacggcg gcgaccagaa 
000181 gccgccgccg gaaggagcgg caagaaggtt ccggcgatgc aggacggcgc cctcctccga 
000241 gcctccgccc acggacaagg acaactcctc ggcggccgac gcgcctccca agacgctctt 
000301 caccggcggc ggccgcccca gcttccggct cgtcggcctc ctcctcgtcg cgtacctcct 
000361 cctcggcacc attgccttct acctcgccat ggaccacatg tccggcaccc gcaccacccg 
000421 cgccctcgac gccctctact tctgcgtcgt caccatgacc accgtcggct acggcgacct 
000481 cgtccccgcc agcgacgccg ccaagctcct cgcctgcgcc ttcgtcttcg ccggcgtcgc 
000541 cgtcgtcggc accttcctca gcaaggccgc cgactacctc gtcgagaagc aggaggcgct 
000601 cctcttccgc gcgctgcact cgcacacgat ggtgcgcgcc atggagatga acaaggtgag 
000661 gtacaagctc tacacggcgg ggctgctgct ggtggcggcg gtggcgtcag ggacggtggt 
000721 gctgtggaag gtggagggga tgcgggcggt ggacgcgttc tactgcgtgt gcgcgacggt 
000781 gacgacgctg gggtacggcg accggagctt ctcgtcggag ggggggcgcg cgttcgcggt 
000841 ggcgtggatc acggtgagca cggtggtggt ggcgctcttc ttcctgtacg cggcggagct 
000901 gtacacggag cggcggcaga gggagctggc gaggtgggtg ctgcggcgcc ggaccaccaa 
000961 catggacctg gaggcggcgg acctcgacgg cgaccaccgc gtcggggccg ccgacttcgt 
001021 gctgtacaag ctcaaggagc tcggcaagat cagccaggag gacatatcgg agttcctcga 
001081 cgagttcgac aacctcgacg ccgatcactc cggcaccctc tcccccgccg acctcgccgc 
001141 cgcccagcct actccggacc cgccgccttc cctgcgttag acatttcatt tcaccgccat 
001201 ttttctttct ttctttcttg gaaatactcc tccaagagtt agtcctactg tacatttact 
001261 gatgtaaatt actcaattga aattagtagt tgtccaaatt gaagcctgta taacattttc 
001321 tttgtctaaa attatatgta taacctattt tgcctttttt ttttactagg taggagtagg 
001381 acttgttagg agtactatac taaactgata tagtagcatg taaaaattac tccactaatg 
001441 tgaaattttt gtgttacatg tttcttct

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
BJ471848 baal28a18 357
more... (Total Hit Count: 2 )
Hit Wheat ESTs  
Acc. No. Clone Name Length
CJ947902 whchul21c18 371 view details
/rice/oryzabase