cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK122176
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0729300
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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31946078 -
31954367
( + )
;
8290(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
31946078 -
31946293
( + )
;
216 (bp)
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Exon 2
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Location |
31947879 -
31948511
( + )
;
633 (bp)
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Exon 3
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Location |
31948610 -
31948818
( + )
;
209 (bp)
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Exon 4
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Location |
31948909 -
31949058
( + )
;
150 (bp)
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Exon 5
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Location |
31949157 -
31949290
( + )
;
134 (bp)
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Exon 6
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Location |
31949755 -
31949864
( + )
;
110 (bp)
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Exon 7
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Location |
31950119 -
31950225
( + )
;
107 (bp)
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Exon 8
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Location |
31950346 -
31950484
( + )
;
139 (bp)
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Exon 9
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Location |
31950608 -
31950724
( + )
;
117 (bp)
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Exon 10
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Location |
31950821 -
31950928
( + )
;
108 (bp)
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Exon 11
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Location |
31951124 -
31951195
( + )
;
72 (bp)
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Exon 12
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Location |
31951432 -
31951553
( + )
;
122 (bp)
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Exon 13
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Location |
31951685 -
31951851
( + )
;
167 (bp)
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Exon 14
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Location |
31951947 -
31952068
( + )
;
122 (bp)
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Exon 15
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Location |
31952148 -
31952285
( + )
;
138 (bp)
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Exon 16
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Location |
31952365 -
31952507
( + )
;
143 (bp)
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Exon 17
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Location |
31952602 -
31952664
( + )
;
63 (bp)
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Exon 18
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Location |
31953010 -
31953073
( + )
;
64 (bp)
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Exon 19
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Location |
31953141 -
31953276
( + )
;
136 (bp)
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Exon 20
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Location |
31953381 -
31953454
( + )
;
74 (bp)
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Exon 21
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Location |
31953543 -
31953637
( + )
;
95 (bp)
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Exon 22
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Location |
31953732 -
31953763
( + )
;
32 (bp)
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Exon 23
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Location |
31953876 -
31954367
( + )
;
492 (bp)
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Chromosome: 6
, position: 31,946,078
- 31,954,367
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ggtagaagca gaggtaagca gggcagagag tagaaacagg agcactgcat tactggtagt
000061 gggagcgtaa agctctctcc tctcttcttc ttcttcttct tggcgttttc cctcatctcc
000121 ttctactagt actagtacat caccctccca ctcttcttca tcttccgccc agcgaggttc
000181 gtctggatgt gagctgaatc tctccgtctg cccaaggtga tcgccagttc ttagctcctc
000241 cctcctacca tccaagatgc ttcgatctgt tttctctttc ttcatttctt tccttcagtt
000301 ggtttcccgc tatcctgcaa cttctttctc gacttccctt actttcaaac aagaaaaata
000361 tctcgagttt cttgtgcttt gattactgat tccttcgctt ctccctttct gtttgcttat
000421 cgtccaacaa tgtaatgtgt tcgagttgat ttgcaacacc gacttgcata tgaaatgcgc
000481 ctctttctgt ttattttctt ctttctttgc tttcttcttt tgagttgatg ctatctttct
000541 ttacttacat gctgcgattt ttctttttaa tcgacgtctg tgagactacc taaaaatatc
000601 ccggtttgtg agttgttttg ttgggaaaag gttgggcctt tcccttctat gcgcagtgtt
000661 cagttttcag gatgttcctg ttcttccgtt atcctttatt ctatggcaac ataaacatat
000721 ctatgcacac aggacctcac gtgtagacac gtgcacatca actaaaaaat gtcaccaaaa
000781 aatctagaaa aaatcataca catactttca attgtattac acctagggtt aaaatcttaa
000841 catcaaattc attatatttt agccgtaaca aaaaatctga cagttttaag gttgcaattt
000901 tgtcagaatt ttatcttttt tgttattctc tatgtagaat gaatttgaag atgcaatttt
000961 gcacgtagat gtaatactat taaaagtaca tgaatgaatt tttctagaat tttttatgat
001021 aatttttagt tggtgtacac ggtgtgtata cgcgagtgcc tatgtgcatg ggatacgctc
001081 ccttgttcta tccctgctaa taccctagtg gtaaaacgca ttgatatgcg gaaatgttcc
001141 acatttttat tgttttttct atgaaagacg tgatcttcgg cgtttaaaag ccctgcctta
001201 tctggttctt acttttctta tatactctat tttcccaaca taacagtgtt cttcgatctc
001261 ttcacatgtt tgagccattg gtaaaactga atgtacttga gtgtttaatt tggctagttc
001321 aatatgcaga actctcttgt ttgatcttaa aaaaagctcg atcagtttgt taggtttgct
001381 tctttctctc tctggtttta agccatttgg tgggtgtgtg ctttatggtg agcctactgt
001441 cgtgttctcc acttcttcaa ctcctgtttt aatttgttta cctttaccat cctgttagtt
001501 cctctgtaaa ttgtttctat tcctgattaa ttagttcatg ctccgtgcgt ccgaagcata
001561 tatattctcc gatgctatcc gagctaagtc tagatagatg gtatatattc ttacaaacaa
001621 caccgtgttg aacctaaaca ctggagtaat aaacaagtag tatttgatat tgacctcgtt
001681 agcttgcctt tgtaatttac caacaacctg tataatgtct ggactgcagc tgtatagatt
001741 ttgtgaatat gaagttgtct ggattatggt aagaagtcaa cttaactctc ctttgtggca
001801 gttgattgag ttggtcgact gaatgggatc aaggagacca agactgcctg ggtttggtga
001861 ggactgtgag cctcgtggtg gtgggagagg aggaggtggc cgtggccgtg gcagctacta
001921 cccacaggca cagcaatacc acccacaagg acatggtggc cgtggaggag caggctacta
001981 ccatggtgct gctcctcaac ctcgcggcgc aatggtggtg cagcaatggc gtcctgctac
002041 tgctgctgct gagcatttgg gccatcaaca gccctacaac agcagtgtga gaccacagca
002101 ctattatggt ccgtctgcca tagctcccga gctgctccaa gcaatggatg ctccacatga
002161 gcctcctgcc aatgtctcct caccagaagc agcctctccg gaggcatcat caccacggtc
002221 tcttgctctt gaggtcacag agcagcttca ggacttgtct gtgcagtacc aattaagtga
002281 gagccaggaa gagattgtcc aacatgttcc tgtgtccacc aaatcattta aatttcctca
002341 ccgccctgga agtgggagta ttggaaccag atgtttagtg aaggcgaatc acttctttgc
002401 tcaactgcca gacaaggatc ttcatcagta tgacgtgcgt ttgtttttcc atgccacatt
002461 cctccttgct cctcctacat gtttttcaat ctctcagttt ttatttgcca ccttgtggtt
002521 catctttgac aggtttcaat caccccggag cttacatcac gaattcggag ccgtgctgtg
002581 atggaagagt tggtgagact gcacaagatg tcatacttgg gaggacgtct tccagcctat
002641 gatggtagga agagccttta cacggccggt ccattgccgt ttacttcaaa agaatttcgc
002701 atctctttgc ttgaggaaga tgatggttct ggttcggaga ggtgtgcccc tattcctttt
002761 ttgatcacca tgatattcta gtaccagggc aaatcatctt gtatattctg actcttcttt
002821 ctatgatcta ggcgtcagaa aacatataac gtggtgatta agtttgctgc aagagctgat
002881 cttcaccgtc ttgagcaatt tctagctgga aggcaggcag aggctcccca ggaggccttg
002941 caagttcttg atattgtctt gcgagagttg ccaacagcaa ggtagatttc tttgaaacat
003001 tacgtagaat gtatattcag ataataggag aatcaatcca aactattgag tcatccttcc
003061 aatcccattt ttcttacaga tatgcaccct ttggtcgatc cttcttctct cctgacctgg
003121 ggaggagacg atccctcggt gagggactag aaacctggcg tgggttttat cagagcattc
003181 gtcctactca aatgggcttg tcactgaata ttggtaaaac tctctctgtt tctgtcgcat
003241 gatctttctc atgaatcatg aatatgggta tgatcttgtg catatgtgca tttatgtttg
003301 tatgtaataa tacattgaag accccagtca aaaaaaaaac attgaagact catggaacca
003361 gcaataaagt agcctggttt tcataaatcc tttgccttaa aacatcaggc tgaggccaac
003421 tggtctgtcc aatttttttt atcctatcac caatgccatg tttgctgcac atttctgaat
003481 ttgaaaaact tagctttgat ttttttcccc aggcttatga tcatgtcatg aaggatctca
003541 tgtacataaa atttacatgt taactcataa atatcaatct tgaactttaa acagagatgc
003601 ctttgtatat tagtactctt actttttgaa cattttgccc tcaatttata tcttcttttc
003661 ttttcctgcc ttttcagata tgtcggcaac tgctttcttt gagccgttac cagtcataga
003721 ttttgtcata cagcttttaa atactgacat ccgctcgagg cccttatcag atgctgagcg
003781 tgtcaaggta tgctggtgat cctgttttac tcatctttac cttttatttc attggaagag
003841 ctattcctca aatgaactca gtatatttgt tgtaatacag aagatataca gataattatt
003901 gcatctgttc ccaatgatta atctttagtt tcaacggctt tgttttgtct tatgtttttg
003961 aatcatatgt ctagcttatt tgtatatcat ttttgtcaac taattaaata acgaatttta
004021 tgttattatg caacacccta gatcaagaag gccttaagag gagtgaaggt aggagttact
004081 caccgtggca acatgcgccg gaagtatcgg atatctggtt tgacatctca ggcaactcgg
004141 gaactgacgt attgatctct ctctcttttt gttcataaca aatgctattt gccttttaag
004201 tcactagtag atggcaatcc tatgccacta ttattgtctt cctgaaatta atgttcattt
004261 tgccacagtt ttcctgttga tcaaggaggc acagtgaaat ctgttgtaca atattttcaa
004321 gagacatatg gatttgcgat ccagcatacc tatcttcctt gtctgcaagt tggcaatcag
004381 cagcgtccaa attacctacc aatggaggtt agctagcaaa gctctatgat attgttctgt
004441 ttccttgttt aacttgtcct gccaaaattt tcaattctat tttttttttg gaaggggggg
004501 ggtgcatact taacttttat gcttattcag gtctgcaaaa tagtggaagg acagaggtac
004561 tccaagagac tgaaccagaa tcagataagg gctcttttag aggagacatg tcagcgccca
004621 cacgataggg agcgtgacat aattcaggta tgtcacacct tgcatagaat tatgacgctc
004681 taccattgta cgtgtaagtt cacatgctta cataaaaaaa cattttcttt tgtgtgtatg
004741 cagatggtga atcacaactc ctaccatgaa gatccttatg caaaggagtt tggcattaag
004801 atcagcgagc gtctggcctt ggttgaggca cggattttac ctgcccctcg ggtaggtgga
004861 aaccaattca tgtagaaaca atggtttttc aagttcattt ttatcatgtt gtcacccttt
004921 tctggatgga tgaagcatag cttcaatggt caaatgagaa ggcacataaa aaaattggat
004981 gattaacatc gcttcaaact ccttttaaca tttttaacct cgcaatcctc ctatttgttc
005041 atgcagctca agtataatga gactggcaga gagaaggatt gcttgcctag agttggtcag
005101 tggaatatga tgaacaaggt agtgataata cttaatgcat aagtagtggc tagtttttac
005161 aaatcattat gttcagtttt ttttacagct tttgaacttt gtctgcattg cacatacttt
005221 atgacactca tatggcaatg ttgattgtgc ttactctagt cctagctatt atattttgtt
005281 tcttaagttt ggttaatcaa ataggtgttc ctgttttatc tcaaacctta tcattttcat
005341 ttctcgctat ccagaaaatg gtaaatggtg gtagagtcag gagctggata tgtgtcaatt
005401 ttgctcgaaa tgtgcaagag agtgttgcta gtggattttg tcgtgaactg gcccgcatgt
005461 gccaggcctc aggaatggca agtatccctt aatgcttcca gatgcatttg cccattgaca
005521 tacagaagca tctatatagt gcattcaatt ttacatcatt tagacattta cttgtgtaca
005581 gtagtaactg ttttacaagc aattgtagga ctttgctttg gagcctgttc ttccatctat
005641 gtatgcacgt cctgatcaag tggaacgagc tctgaaagcc aggttccatg atgcaatgaa
005701 catacttggg ccacagcaca aggagctcga tttacttatc ggactgcttc ctgataacaa
005761 tggttctctt tatggtatat aaatttgcaa ctctgaatgg ttaacttgta ttgatttatg
005821 tcctattgtg ctcaaaattc aagtcaaatg ctgactctgt tggtatcagg tgatttgaag
005881 cgtatatgcg aaattgacct tggattggtt tcccagtgct gttgcacaaa gcaagtgttt
005941 aaaatgaaca aacaaatcct agcaaatctt gctctgaaga taaatgtgaa ggttggtggt
006001 ctagtgatat ctctactcat ctttgtatgg attccttcag gttttgtgta acataaattt
006061 tatcttatag gttgggggaa ggaacactgt actggttgat gcagtgtcga gacgcattcc
006121 gttggtaact gacaggccta ctattatatt cggtgctgat gtcacccatc ctcaccctgg
006181 cgaagatagc agcccatcca ttgctgctgt aagttgaaca agctaatgct ttatatttag
006241 tgaccattct tgtcaaaatc tgcgaacaaa tgtatgttgc cctgcaggtt gtggcctccc
006301 aagattggcc tgaagtgaca aagtatgctg gtttagtttc tgctcaatct cacagacaag
006361 agttaataga tgatctgtat aacatcacgc atgatcctca tagagggccc atctgcggtg
006421 gaatggtcag gtatatgccc atgccacact caacatctct cctctctgtg tccttctatt
006481 tctttttagc acaaagtatt aattggtgat gtccacattt tcagggaact tcttatatcc
006541 ttcaaaagat caactggtca aaagcctcaa cggataatat tctataggta tgttcttgca
006601 taaattacca ctcaagcttg tctgagccaa gctgattctt caaatactta gcggtttcag
006661 gctgactact ggaaatcctt ggcggtagta ggttgttgaa tctcagcagt ctttgatgct
006721 tgactgagcc aatatgattc ttgacatttt attatttgag gctcactgga gccatgaaat
006781 caaaacaagt taatttccct atgcagaaaa cttgagctga aggccatgtt tgttttctgg
006841 ttgattttta tcatggagtt tagggttgag tttgattaga aaagccgcat cagtacactt
006901 aagtataaag ctgaagtttt gccttttcac agggatggtg ttagtgaagg gcaattttac
006961 caggttctat tgcatgagct tgatgcaatc cgaaaggtaa aactttcccc tatttttcag
007021 actttatgac ttctcttaat ctttgtgtct tgctccctct caggcttgtg catcactcga
007081 agcaaattac caaccgcagg tgactttcat tgtggttcag aagcgccacc acacgagatt
007141 atttgcacac aaccacaatg atcagaattc agtcgacagg agtgggaaca tattgcctgg
007201 tgagtattgt tcttctgtcg ttattatgca ggttggctat agcttcgggt ttgctagtgt
007261 cgctgtttat ggagttgtcg ttgattcttc atttgcattg caggtactgt tgttgactcc
007321 aagatttgcc atcctacgga gtttgacttc ttcttgtgca gccatgctgg aatcaaggta
007381 aacaacaatg agagacattc taccatctat catcataata tacacaagtt gagaattgaa
007441 atgatgaact cccatctctc cgtagggcac aagccgtccc gctcattacc acgtcctgtg
007501 ggatgaaaac aacttcacag ctgatgcgtt gcagaccctc accaacaacc tctgttacac
007561 gtaagttttt ctttacccca tgatcagttg ttctcagggg cttgaacgag gaacagtctc
007621 tctctctctt aacttgcaat cacttgttgt gcagttatgc gaggtgcaca cgatccgtat
007681 ctattggtaa gtgacagttg ctgcgaaatc ttttccatgc ataattagtt aataaataaa
007741 tatgttggga gtaagagatt tgtggtggct gaattaacaa ccaattttgc tgttgcagtt
007801 ccaccagcat actatgctca tctggcggcg ttcagagccc gtttctacat ggagtcagat
007861 agctcggaca gtggttcaat ggcgagtggt cgtggaggag gttcgtctac atcgcgcagc
007921 actcgtgctg caggtggtgg agccgtcagg ccccttcctg cactcaagga cagcgtcaag
007981 aatgtcatgt tctactgtta gaattctact actgcttcgc ttggctacta ctatcagtta
008041 gcctttaaat tgcctcccat ttgattgcac ttagttgttc atcatgggaa gcctcaaata
008101 agaagtatgc aagacttctg aagccacatg ctatcatgtt gtgtgtttct gggacacacc
008161 attctatttc acattatctg tagactctat cccactattt cataaaagct gggcttcccc
008221 tggctctatt tgtactctaa ttcgtatgga cctgtttcat catttcaaaa tggtcaattg
008281 tcttgtttgc
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
