cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
|
RAP - Accession No.
|
AK099993
Link to RAP-DB
(
IRGSP 1.0
)
|
RAP ID
|
Os06g0527100
(
IRGSP 1.0
)
|
RAP - Chromosome No.
|
6
|
RAP - Location, Length
|
20421603 -
20430009
( + )
;
8407(bp)
|
Exon (Data source : RAP-DB)
|
Exon 1
|
Location |
20421603 -
20421768
( + )
;
166 (bp)
|
Exon 2
|
Location |
20423036 -
20423156
( + )
;
121 (bp)
|
Exon 3
|
Location |
20424041 -
20424557
( + )
;
517 (bp)
|
Exon 4
|
Location |
20424994 -
20425206
( + )
;
213 (bp)
|
Exon 5
|
Location |
20426494 -
20426768
( + )
;
275 (bp)
|
Exon 6
|
Location |
20426864 -
20426975
( + )
;
112 (bp)
|
Exon 7
|
Location |
20427550 -
20427786
( + )
;
237 (bp)
|
Exon 8
|
Location |
20428950 -
20430009
( + )
;
1060 (bp)
|
Chromosome: 6
, position: 20,421,603
- 20,430,009
bp
|
|
|
Now loading
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 acccgttttc gtcctccgct ttccatcgct ccctccacct ccaccgcact accaccacca
000061 ccaccaccaa ccgccgtgcg gacgccgccg gcttcccggc cgcgacgcgg aggaggaccg
000121 aattcccccc cacccctccg tccaatccgc gcgcaccacc tccgaggtaa agcctctgcg
000181 ctccccctgc tccgtcgcgc ggcgggttct ccctccacag ccagccgagg ggggcggtgg
000241 cgtcatgcga ggcagaggga gggaggccgc ctgagggggg caaggcgccg cctcaggccg
000301 gacttaattt gttactgctt cttcgctacg atgccctgct tgctttctct tagcgaattt
000361 ttgtggtctc gtgtgtctag aataggtagc gcggcgtcag caggttttgg gggtttggtt
000421 tgcggctgcg gagttttcag cctttcaggc caagccatgg ttataactgg gtgggttaga
000481 atttttttag ttgcttgatc ggttgctttt acctatcatc acagggaaca aataggtcac
000541 aattggtaat tctaatcatt tgttaatcgg aacgactatg ggcactggtg gtaattgatg
000601 tttcatatac taactgtcac tttcctgctt atctgttcat cggggtgaaa ttggtgtgac
000661 actttgggag ttgagatact cggcagccat accttatcta tgctttgcaa agtttaacca
000721 ccatgtattt gatggcgact ccctccgaaa taacagagag ggatagaaat acagagttat
000781 atatgttaag gctaggctag gctaggtttg ctgtggaaat gattcttata agctatagct
000841 gtttagttta ttttatggga tcaatcaaat tatagtttga taaaatatat catccaactt
000901 tcatgtctct cctaattatt tcatattttc acaacataat aatattatca tttagaacat
000961 ctttgtatta tagtgggaag ctgattttaa catgattact aaaaagaagt aataagctct
001021 atctgaatta aaaaatagtc ataatttgaa actcaaaatt aacttttgat ttaaatacaa
001081 gcattttacc aaacactgga atacccaaaa agctgttgcc ctaaatgaaa cacagtccgc
001141 cgcaatacca aatggagcct gcctacacga gggaaacacc aaatcaccac ttcagcattc
001201 tatctattgt ccagttagct aaatgcaatc attcaatatt caacaatcaa atggacattt
001261 cctgtcaggt gtgatgagtg attgtccatg cacaaaatct aagctgactg ttgtgacata
001321 acaaagttaa atttactgtt tccatttgat tatgttgctg ttctttgttc tgtgtccata
001381 ttcatgtgca tacgcgttac ttcccttact caattatgct tgataatcat cagggaactc
001441 catgtatgca aatgtcgcca cccttgtaga atcaataaag ctgttctagc agctaacctt
001501 tggtttggtg gatttttgga aaatgatgat gggaagagag gacaaatatg tgaggtcagt
001561 ttcctccatc accagttgtt tgaaatagtt tacaaagaat aaaggcttgt caaatgtctt
001621 gtgtcataac ttatagtaac aagtttagga catgaaacat ggagagggtt tggtgatttc
001681 taaagagcaa tggtaatttg gtggttctac actagtgtgg tggatgtgat ccaagctgtc
001741 aataatgagg ccacactttg gtgtttggcg ggagcttcga aactccaaaa gctgttgtct
001801 aaggcagtag ttcttgcacc ctagggaggt cggcttgagt ttcttcggtt ttagagtggg
001861 tgtgtgttgt gttctgtaag actttcgatg ggtgggtgtc agggtttgtt taaatcttgc
001921 atccctcgca tttctttctc tcttaatgaa atgatacgca tatctcctgc gtgttcgaaa
001981 aaaaaatcga tgcttctact ttcatcacat gatggttttg gacattttgg cctctgagag
002041 accctggcat ggattgactt gttggaacga ttgttactgc tcatttcctt gtcttttgca
002101 gcatataaac atgaatgcaa taatttctct ccaatttttc caaaatagaa atctagcttc
002161 ggttcaagat catcaagaag tctgacatat aaatgtatgg aaatgacaac accagtatct
002221 gattaaattt ttgagtaaat aatgaagact gctggtaaaa ataacgtagt tgaagtaaga
002281 gagaagagag aagagagaaa aaaagtttgg gtctctaggg acctgatcaa tgaatattaa
002341 agtcctggga cccattaaag ttttgagtaa atattgaaaa caactactga aaactcgatg
002401 taataattat tctgtatttt ttttaaccat gtatgcagat ttgaggactg gagatctgag
002461 cagtcagtta tgtcaccacg gaggcataat gctttaagtt cacttaaaga aagaactgct
002521 ggagtttttg cattcctagg aaaccttgtg cattctgaaa ccttaaagag attggtgctg
002581 catgaaagga agttgacaac tagaactctt catcctcagg gaccatttct gcaaagctgg
002641 aacaagatat ttgttttgtc atgtatcttt gcagtttctg tggacccatt gttcttctat
002701 attccggtta tcaatgacaa caacacatgc tggtatttgg ataaaaagtt ggaaatcaca
002761 gcaagtgtcc tgcgcttttt cacagatatc ttctatatac tccatatcat atttcagttc
002821 aggacaggtt atattgcgtc ttctcttaca acttttggtc ggggtgtctt ggttgaggat
002881 agatatgcaa tagcaaagcg atacttgtca acatattttc tgatcgatgt ctttgctgtt
002941 ctacccctcc ctcaggtact ccgcatacca tgtacttagt taagctcagt atggaactat
003001 ttcatagtat agttcacatg attctttaga attatgatgg tatgttggtg atatacatat
003061 aaattatgat tagtggatgc acctttgata gtccctacat gagaaaaata atagatattc
003121 acctctttta tgatttataa tgatataatg gaattcacat attggtatca tgggatgatt
003181 agtaaggatg cacttttggt agataccaca tcagaaaaat aaaagatttt gattttactc
003241 tgatacatgc aattcacatg ttagaaaaat ggggtcatat acaaagagct ctgtctgttt
003301 cttctatgac tttgcagtct taatagtgca ctaagttatg cgcctttgat ttctcagtca
003361 agcttgtaag catggtcaat tttgttacca ggtggttatt ttggttgtgc tacctaatct
003421 tggaggctca gaggttacaa aagccaaaaa tatcttgatg tttatagtta tatgccaata
003481 tgtgcctcgg ctgatccgaa taaggccact gtatctccaa atcacaaggt ctgctggggt
003541 aattacagag acaccatggg ctggtgctgt tttgaacctt ttaatttact tgctcgccag
003601 tcatgtaagt attctattca ataactctgg atagtcaaca atgccaaatc aactgtcctt
003661 tgctagagca atatttaact gcaatagtgg aaagctgaaa acatgatcaa tttcctgtaa
003721 agattacatg aatttattat tgatcaaaat aaattcggct aacctggttg atgtgtggta
003781 tgggtggaat agcacttgtg tagtctcatt tttttttatt ttttgccaaa ccagagccat
003841 aaacacctct tgttttgtgg ttttcatcag caaagttgtc taaatttgta tacagaaagc
003901 aatggtgtaa cctttaaagg tttattttac ttaagttaca taagtattat aaggaaaagg
003961 attttgtcca acattttctc gatccatttc tctgcgagag aaacaaaatt ttagtttgtc
004021 caatctgaaa tacactctaa ttgtaacagt ataaattatt agtttatatc agctatcatg
004081 taccaaatat tttcaatgaa atttgatact tagcgcttag tagttcatcc tgtttctcgt
004141 gggtcaattc tcaagagata ttctatcaca tatacaccaa tttcaatgtc atcaatgcat
004201 atttgtaaca atgttgtcca atttttctat gattctattt acatgcttta ttggctctat
004261 atctgtttcc tgatgggtgt catttaggaa gtcataacag tcaagattta caaaataaaa
004321 gtcgtaatat tggtaagaaa ataatatgca tggattttgt tttctgtaaa aaaaatggct
004381 ataatatcct tatgggtaac aacactttgg tctctcaagt tttgcttgag gctcctgttg
004441 ggctctgatg tatcatccag atgtgtgtgt gtcctcaaat tttcctcatt aaaaattaaa
004501 attggatcca ccgggagcag cgcctgtaca ggactaatcg gtgttgaccc ttgatctctt
004561 ggcttggcca attcgtttga tatgcatgtc cttgtagtgc ttcaactggt tcaaaggagt
004621 aaggacaatc atgacccata gtcggaaaac ttggaggact gggtggataa attggaatgt
004681 catggacaat cacaaccaaa gaatggccta tgaaacttga cttcatacta ctaaattggc
004741 aaataattaa aatattagtg gcccatgcaa ccatctagtt gacttcattc ataagtggga
004801 tacttttgca actgcagtgc cactaaattg gatataatta aatatttcca tgcaccttat
004861 atatttatga caaatctttg aactgctgca ggtccttgga gcactctggt acttgctttc
004921 cattgaacgc aaagatgcct gctggagaga catgtgtagt aataatagta cagtctgtaa
004981 tcaggcatat ttgtactgtg gggataagga aaactcgatc ttacggactg cttgccttcc
005041 aatcgactca aacgatatag atccgaactt tggaatttat gtgccagctc taaataatgt
005101 ctcgcaatca actaattttt tggcaaaact attctattgt gtttggtggg gtctgcaaaa
005161 tcttaggttt gtgcaaaaca gaaacattta aagtattttc tgcttgaacc aataaacttc
005221 tctatgccac ctatatttat gtgttggtct atttaatgca gctctctggg ccaaaacctt
005281 aagacaagca cttatgcatg ggagaatctg tttgcagttt ttgtctcaat atcaggcttg
005341 gttctgtttg cactgctaat tggtaatgtg caggtacgca tatttagctt cattggctat
005401 taattttaca agtcattttc ttgatttatg ttattattca agcttttcat aatagaactt
005461 gcattgcaaa tcagaaatat gctaaaattt taagtgtgtt atgtgtctaa tgcctacata
005521 atcaattgaa gagaacatga atgctatata ctgctgctaa agatataccc cagaacaaca
005581 gagaatattt ttatgagtga attatggaaa acttaaaaat aataaatcaa attaattctg
005641 agaaaaatga gtccaactta ttttatctcc tagggatatg aaactaaaga tatggaacct
005701 tgtgctaggt ttcgagtgtt cattccaata ccatttggag ataagactag cataatcttg
005761 gtaggaataa gatcatcagt ccttatttgc aacagtagtc tttgtacaaa atggttcagg
005821 tcttgtacta caaagaatgt ttcacaggat ccctgacatt gaatgaaatt aggtgttttt
005881 gctgcgtaat gataaatgcg taatttgggt agctaactca tccttccatt ttttgtgact
005941 tctacagacc tatttgcagt cagcccatct gagagaagaa gaaatgagag tgaaaagccg
006001 tgatacagat caatggatgt catatcgact gcttcctgag aatctcaagg aacgaatacg
006061 tcgtcatgaa aaatatagat ggcaccagac gagcggggtt gatgaagaac tcttgcttat
006121 gaacctcccc aaggatctta ggagggctat aaaacggcat ctttgcttat cacttcttat
006181 gagggtatgt tctcacaagc ttcttttgca gagtaacctg ctgtagtagt cttatttttg
006241 tgtcttatcc aattgcagaa aatatgttgg ttaagtaaat aatttggcca ttttcacgta
006301 gctcagccaa atctagttac agtagcagac ccaagaaata tgatctgaga tttggctgag
006361 caccatttgt tttctactta ttgtagcata atattttcag tccatgcagc tcatcatgct
006421 atattgttta aaaccggaat tgcatcttcc tcacaattgc tgatgacata aaagtatcct
006481 ggttgttcaa gaatgacaaa gaccatgttc caaaaggcac ataaatgaaa gcttaaggct
006541 tcttttacct tcttttcaat agttgtagag ttgcttatgt gttgcaaggt gtcattgttt
006601 cttgctctga acctaagcca attacctcta aagtggtgat gtaggtcttc caatagtcgc
006661 gtgctttagg tgcacaccag taatctagca tgaaattttc agtgcatgaa atgtgtttga
006721 ggtactcacg tagaaactgg aaaattaagt aatgtaaaac cattggcgta ctagttatgg
006781 gtcatctttt cacattttaa ggttctgggt tcagacatca gaaagcatta ctaaactggg
006841 aagcagtggg aagggtgtaa aggacgaggg tcactggggt ttacatggtg aatcggaaat
006901 cagctccatc atccaacttc tgtagtttct atgcatctga aatgctcttc atttacgctt
006961 ataggcatct tttttcacag cattggattt agtagcacca tagcaagtca tcagtttggc
007021 tgtggctttg aaggtcacgt gtttatttct tttttttgga tgtataaaat tttgttggag
007081 cattaatggc aaaatcgtac tggaattagt aaataactct tctaactaac taggagtaaa
007141 ttaaacagga caacaatgcc aaacggagcc ataatctagg gaggttcttt ggggacatgt
007201 tccagggaaa ccttgaatct gttgcagcag taaccgttgt gttaatatct tttgtgtgtg
007261 aatgtagatc atttatctcc ctgctatgga tggacataga ccatctcccc ccgttatgat
007321 attacaattc ttttttcttt gcttcaggtt ccaatgtttg aaaacatgga tgatcaactc
007381 ttgaatgcct tgtgcgaccg cctaaagcct gttctttata cagaaggtag ctgcataatt
007441 cgtgaagagg atccagtaaa tgaaatgctg ttcatcatga gaggtaatct catgagtatg
007501 acaacgaatg gtggaagaac tggcttcttc aactctgatg ttttgaaagg tggagatttc
007561 tgtggcgaag agctcctgac ctgggctctt gaccccacgt cagtttccag cctccctagc
007621 tcaaccagga cagtgaagac gatgtccgaa gtcgaagctt ttgccctgag ggctgaagac
007681 ttgaagtttg tggccaccca gttccgacgg ctacacagca aacagctcca gcacacgttt
007741 aagttctact cgcagcattg gagaacctgg gcagcctgtt tcatacaagc agcctggcat
007801 aggtactgca gaaagaagat cgaagactct ctacgcgaga aggagaagag gttgcagttc
007861 gcaatcgtta atgacggtgc tacaactctc agcttcaggg cagcgatata tgcttcgcgt
007921 ttcgctggca acatgatgcg gatcttgagg agaaatgcca cccgcaaggc tcggttgaag
007981 gaaagtgtgc ctgcaaggtt gttacaaaaa ccagcagaac ccaactttgc tgcagaagag
008041 cagtagttct gtttaccacg aatgcgtaag gaattttttg tgcatggctt gtgcattttt
008101 tacttgctga tgtttttgct ttcagttgac actagaccta caaattaagg agaggaaaaa
008161 atcgcaatag gtgtctgtat ctttctgtaa gatctgtata tgtgttcgtg tatgataata
008221 ggtgatacgt gtaattatta ttcatcaggt gtttatatac aaattgtgtt tatagtagtg
008281 tagtgagcat tccatcccgt gttcccatca ggctcttgaa gtccaggcac ggagcaagat
008341 cacattgtaa cggagacact tgttttaact cacatatatt gacatgatat agaattaatg
008401 gattgtt
|
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。