cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
|
RAP - Accession No.
|
AK064330
Link to RAP-DB
(
IRGSP 1.0
)
|
RAP ID
|
Os06g0487900
(
IRGSP 1.0
)
|
RAP - Chromosome No.
|
6
|
RAP - Location, Length
|
17609929 -
17622664
( - );
12736(bp)
|
Exon (Data source : RAP-DB)
|
Exon 1
|
Location |
17609929 -
17610695
( - );
767 (bp)
|
Exon 2
|
Location |
17610816 -
17610926
( - );
111 (bp)
|
Exon 3
|
Location |
17613214 -
17613328
( - );
115 (bp)
|
Exon 4
|
Location |
17613652 -
17613774
( - );
123 (bp)
|
Exon 5
|
Location |
17613967 -
17614061
( - );
95 (bp)
|
Exon 6
|
Location |
17615063 -
17615162
( - );
100 (bp)
|
Exon 7
|
Location |
17616316 -
17616411
( - );
96 (bp)
|
Exon 8
|
Location |
17616498 -
17616527
( - );
30 (bp)
|
Exon 9
|
Location |
17617423 -
17617496
( - );
74 (bp)
|
Exon 10
|
Location |
17619728 -
17619776
( - );
49 (bp)
|
Exon 11
|
Location |
17620561 -
17620799
( - );
239 (bp)
|
Exon 12
|
Location |
17620868 -
17620926
( - );
59 (bp)
|
Exon 13
|
Location |
17621780 -
17621831
( - );
52 (bp)
|
Exon 14
|
Location |
17622346 -
17622664
( - );
319 (bp)
|
Chromosome: 6
, position: 17,609,929
- 17,622,664
bp
|
|
|
Now loading
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 agcactgcac gcgttcctgc tccttgtgtt cctctctcct ctcctctcct ccgcgtaggg
000061 ggtagagtag gggaatccgc gccgcctcct gctcctggcc gccgtgaatg ctatggccgg
000121 cggcgaggac ggggccgacg gcgtcggaga tgacaccgag cttcgcaggt tctcagacgt
000181 ggagctgctg gagaagtcgc ggcgcattca gggggagctc agtgggggta tcgagcgaag
000241 gctcaaggac cgcggggcca agtttcgccg cttgctagac gccatcgtcc gcgagattga
000301 tcgccgtaag gcagcaacgg tgagattctt cttctcttct ttttttttta tgctgtaagt
000361 tattttcttg gtgtgcggtg aggggattaa agattcaatc cttgcccggt gcgcttcaat
000421 tagggcatga ttgaagggat ggggaatctt gatttttgtt atgcttctgt tcgatgatat
000481 gcctgccgcg catacccaac tgtaataatc cagtgttgac aacttcaatg tactgtaagg
000541 ctcttgttat ctttggtgtg aggatggtga ttactggaga aaatgatatt atgttatcaa
000601 tgtactccta tattctaagg gaatgctggc caatgctaat cacttgataa gttgatattg
000661 tgaattttct tgtgtctgat ctctaaaata ggtaacaaaa gagcgcctca cacaatatat
000721 gaagtagatg ttaggcaacc aatccgttaa atgctacagc tatttacata tacattagtt
000781 attaagggtg gataaggtct ttgtaagact gatcatcgta tgttctcttg caggatgatg
000841 acagatgcgc aagggtagtt caatcgggat gtgcagaatc atcaggtatg ggattgattt
000901 gtgttaagat attggttgat ttatggttgg tagcatggat catttatgac tgggacttat
000961 agtacacgtg ttctcgttca tgacttcaag tattgatttg cttgctgttc tattgaacgc
001021 ttgttactca ctgcggtgcc agtgttgtgt gatagatgct gtaacttact gaagataact
001081 taatatgtcc tttgcttctg tcctctctta agatatgggc aagctgtcta tttcattctt
001141 cataccttaa acgctttgct ttgtagtaga tttacatgca tgaaaatgca gtataggttt
001201 tcttagttca aatgatacat ataataaaat aatgtggaag agtaatacaa ttttactaca
001261 gttagttcct gatttgagct gttggttcac atttttcttc aatatttgat gatctaaggt
001321 gagccactcc tatgtcatgt gacttcccat ttgttgagta aaatgttgat aaaatccaga
001381 attagctgat gcccaaagct cttttcaaag gaattaatta gtttcaaaat tgtgtgatgc
001441 tcagtaacag gtcacgatga acatgtatct gttaaaagaa gaaatcacca ctttctagta
001501 attttactcc aagagtatat tagcacacaa ttcgagatta tatgagcaag ctactgctag
001561 tctgctacta tatcaattgg gcagacaaaa accttgctag ttttcagatc atatttcttt
001621 gtttcataat agttggccat ttttttacca tgtgtttctt ttatagtgat atctacaatt
001681 ggttactatt ctatctgaat tttattccat gccaacctgt tggttttatt aatgtcagtt
001741 aaacaacaag cagtaaccat atcagatttt cggtcctcct ttgggataga tgaagaggta
001801 actattttga tctttgttat ataaacccag tattttgtgc aagtgtttta tttcctttac
001861 attaggcagg cgttgatgta tctcatttgg aaacaagtgc atgcattggc gacccaaaaa
001921 cttcaacaga taatgagggg atcttgtgtg aagaggaaga ttcctgtaag tgtaaaccct
001981 ctacgtctca aaaggcatca tatgttgata ggtcaactta tatggaaaat atagatgctg
002041 ctgatgatgg caaggataat ggctacagta ggatatgcaa agatgcccac acttctagga
002101 aaaggttagt atacacaaac tcttgtattg cagagtctca agccgaacat ccattttctt
002161 tgttatggga atgttaacag ttaacttgtt ctaaaatcat gcatcatttc atgagatgca
002221 taaccctatc aaaattcttg gtgttcatac cttatagata ttaaagcatc aagggaaatg
002281 caaaacattc gtttagataa cttatttttt tacaatttag aattatgaag catggagatg
002341 taggtttcca tcaaacactg attttttaat tgaatcaaac gcatccaaga caatgcaaaa
002401 catagaaaaa aaagaagcaa tcttacagtt gcaatgattt atataaaagt tgtactccct
002461 ccatttttta atatatgacg ccgttgactt tttttagata cgtttgacca tttatcttat
002521 tcaaaaaaat atgtaattat catttatttt aatgtgactt gatttatcat caaatgttct
002581 ttaagcatgt cgtcagtttt tttatatttg cacaaaatta tattaaaaaa acggtggtag
002641 tactttttat atggtgcaaa tttaggctaa gcattgtgac tgttagataa agcaaatcag
002701 ttgacaaaca aatagcaata ctgctattat atataccatg tcttgtgcat ctgttagact
002761 gttagattgt tgtatatctc accagttcta aacttgtaac tgcatatatg tattgatcaa
002821 tgaatatgtt ttgttaatct gtaacttatt agttattgta ttgaattatg ttatctgtcc
002881 tctactagga atggagaatt ttcacctacc ttttcaatgc gattgcgatc aagaaaggtt
002941 agtatgtaca ttttcctttc caaacatcgt gacatggtat actagtagta atttttatgt
003001 tgaatactaa agttctagta atacagttgg cagaggtcca ccacccctat tattgccagt
003061 acataaatta gttgatttgt tttttgacta tctgttatgg tggtcaataa catggaaaga
003121 ttaattatat tttctaactg ggaaaaagga aatatttatt tgcaatgata ttatcatctt
003181 ctcgctcact atcaaagaat gaaccttact gccctaaagg ctcctccttt taactgaatt
003241 gtgataaatt tgtgaagttc cgtttgctga tgtgtggttg attctgttat taccaagctt
003301 gatgataaat tgttgattag atgattgtac acgctgtgtt ttatcttcgt gtcaagtgaa
003361 ttgttatttt tcatgcatgc tcattgagtt ttttatactt tgaccatttt cgcattcctt
003421 catttcacaa atacatgcca tttcagatgt taccatagtt tctaatctac agctttgtgt
003481 actaatttca gtagtaatat gctggtaaaa actataagat atgttactac aaaatgtatt
003541 ccttttgaga atctattaat attatttcca tataaactga ttagatacct ttttttgtta
003601 taacattggt gctgatttct agtatgcaac tatgcattac taaaattgga atttatttgt
003661 aatatgtgac atttagaagg aaagacatag aaaaccggtt attttctaag taactacgat
003721 tagaataagg attctgctcc aattagaatc aagatggacc ctgtacaaca tggttctatg
003781 gtaacaatag agtcctagga ttgtactatt aaaagccttt ttttgaacct tgtggcaaca
003841 aggggttcgg gggattatgt aaacaaaaag gcaggagggg tggtcgaaca gagacgaaag
003901 tcggccatag tgatccggga gtcccgtgtg gaagggctct cgctcaacgg atcaaaggta
003961 cgccggggat aacaggctga tgactcccaa gagctcttat cgacggagtt gtttggcacc
004021 tcgatgtcga ctcatcacat cctggggttg aagaaggtcc caagggttcg gtctcttagt
004081 tgaggagtgg tggcatggga tctctaattc tcccccatgt tcatgcatat ggggcatttt
004141 gagtttgttc tgtggtgtga acgttttttt gctcttattt ttcttaacaa acaacaaaat
004201 tttctgggtt tttaaatctt gcacatattg actttgctgc ttataaaggc attaatgttt
004261 tatagtttat aaatatcttt ccaccaattg ttacacccaa accatgatgg attccaattc
004321 catagctata ctgttagtag agatataaaa ggtgtgctga atgtttcatt tgtgatgtta
004381 tttgtctctg aactttacac tgtctaatat ctggttaaat attcataaat tgtattctta
004441 tctgatctaa ttataactat cctaattcat atttatatcc aactcctgat atgtaaaaat
004501 gatataatat ggtaagatca cctttgatct tgttttcatc cctacggtta gaacataaga
004561 caactattga gtatatttgt ctacgcatcg aacatgtgaa ttgcgatttg ctactgctga
004621 taaggggtat acccacttca gccgtctgca ttgaagatgg catgaaaatt tcttacatat
004681 caaaatatcc aaaattttat ggcatattgg tattagtaac atgagtacat aatgcttttg
004741 tacaatttaa aatgaaactt caggtcggca gatataccca ttaaaaacat attttgtgaa
004801 cccagtatga ctaatagatg ggaagttttg atttttgatg catatttcat cccttcattg
004861 tgatttatat gggaatgtgg gggtgggggg ttgttttttt atggactgta ccaggaaaat
004921 agaaaaaacc tgggcagctt ttgattcttc ggtagtttat gatcagtttt cagttccctg
004981 tcccatacag taattgcaac gatccacaga atgaaagtga aattaatttg cctcttgttg
005041 ggttattgat aaactgcaca gtacctgtta ttatagatgt actcatcaca gcttctagaa
005101 ctatctatgc tagttagttt gctttaggtt actcttttta caaagcttat tctgatattt
005161 ctattcaggt ggttgaagag gtggttctac tcgatggaga tacttgcatt tcagactctg
005221 cagaaaaaac atcctctgca tggtaaatga gtttatgatt tgtcatttgg ccacttgtgt
005281 tcttccatat gtgtatacca tcttaaccta tgtcgttggt cggtgtctaa gtgagtttgt
005341 gcacaaactt gtgtggtggt tgcaaatagg tataacaacc tgcaaatcgt ttgctctggt
005401 gcaacaactt gcttagtctg tgcaaacctg ggacaaaagt ccacgcaagc ggaaactaat
005461 ctgaggtggc cctcattgat gatacatata ggcctgcagt acacacataa gttccaggct
005521 agactaaagc tacttaattc agatattgaa ccacttgctt gtgttctgca ctatagcaaa
005581 ctgaattaga gcaagcagga aaacaaaatc ccttggatgc tattgtgttc tgacattgaa
005641 ccagtatcaa agctatttgc ttgattttaa ttcttcagta tttgaagttt tgaaccaccg
005701 taaataactg ctaaaacaat gtatagaggc cgtcacagta atctaatcct tctactacat
005761 tgttgcacaa agctactgca attctgctcc ttgcccatca acatcttata agcaacaaca
005821 taaaagttct cccatattca ttacacaacg gttaactatt ggtgagcctt ggtcgagata
005881 tgtccgtact acaggcctac acgtcatcaa tgagtgccac atcaaatcat ttttgcttct
005941 gtggattgtt ttgtcctggg tttgcacggg ctaggcaagt tgttgcactg aagtgaacaa
006001 tttgcaagtt gctgtaccta cttacaccca ctgtgcaagt ttgtgtaccg aaagtgcaat
006061 ttacttatta tattttacgt ctagtatttt ttctgtgatt ttttcactac tgttgactaa
006121 tgctggcact tctacagtga tgcaatgaag atacactatc cttcatggtt ggtctttgaa
006181 ctaacataat tatttgagct tactctgttt tatatacagt tgatggttaa ttttgttttt
006241 ctgttctctg cagggacacc cctaattcta ttgagctttc ttattctgac atgaagtgtc
006301 ttgagcctga atcattgttg tcctcaccta tactgaactt ctacattatg taagtgtttg
006361 tggagaagga tgtgcatcat agactcatag tttcatgaaa caagggcatt gttttaggag
006421 aaaaatatgt attcatcacg gaaaacaatt aataataaag atcacttcat taacatagac
006481 cataaaaaga tccatggctc attctagcag cctattttca catttttcat gttgatatgt
006541 aaaacatggt gatcaaggtg atatctgggt gtcatttagg caatagttag gcactgagat
006601 tgtccggtgt ggtcaagatg actgactggc tgtctcctaa aacattgagc aacaaattaa
006661 aatggaaggg aggcagattg agagcctgct gccgtgttgc cacaactgct gtttttgttc
006721 accattgtcg ttgctgtatt catgcaacag ctgggtcagg ttgatttctc aagttgtatt
006781 tcccttttta cttcttttgc attttcccta taaatcctgc tgcatgctag ttttatggca
006841 tcatctaggc tttcagacag tctttctcta acaccttaca ccttttcttc tctatcttaa
006901 tgaaatgata cacagatctt ctgcatgttc taaaaaaaaa tctaggcttt cagacagtgc
006961 gtcattgcct cttgtcacgt tgtcattgcc tcttgatggt tcatgttctg ttcacatcat
007021 gcatgctata tatttgagat ggagtgacac accagtgtag agctactgtt gtatgccccc
007081 cactttatcc tggctttaca ccttcaacta attaatcaat aagcatttga acattatcca
007141 ttcaatgatt tgaacagaca caatgaagca aacaaaaaat atgaaactcc tgttgtagat
007201 gccaacataa atttctcatt taaacaagaa ataagtgatc ttgtccttta ggcttgaatt
007261 gcctttaatg gacattggag ctcgatagca atccatagac cacgtttcag atgttagcat
007321 ttgttttgcg tgctctattg cctttgtgta atggtgatgc aaaatatatc tcagcaacat
007381 cttttggtat ctgttggtgt tattaacact tgattattta tacttttgtt gtcttgcatg
007441 tgttaaaaat gaacttctgt ctcttttttt attaacaaaa tcataaaatg aaatccatct
007501 aggtacctaa tgggacaaat gccatcgaca agtaggcttg gaggcaagta tcatattttc
007561 aatacatact tcttcagcaa acttgaagcc ttgacatcaa aggttttttc ctatattaga
007621 ttcttaacat ttactttatt tcttaaaaaa ataatatgct ataatgtgat tgatagattt
007681 gctatctttt cttgttcctt ttctattttt ttttgcgggg tattctagtt catctttcat
007741 attagatctt gaattttgca cctagaaaga tgaatagcta taattcaaca tggacaagag
007801 aaacgagtac aagactaacc atatatgtat atgttctatt caatcttact ggtgttttag
007861 gtatttagtt cgtaattgtt gttatggagt tcatgccttg tggacagcag ttatgtagac
007921 aaagcagcag tggtagcact tgtaattttg gttgcagcta gcttgtcaat tcataaggta
007981 caactggcta ggattcagat aattcactaa gagtagctag tttggcataa gtcgttatgc
008041 ataaggttgt ctagttccca atcaattgtt gcctcttaga tttggtttgg agttggtaga
008101 ccatctgtat gagggagcta gtttagcttc tctaagttac gtaagagata aactcttgac
008161 taatgtccac ttagctggtt tatcagtcgt atcacaaagg attgaatctc ctacaagcta
008221 gagggtaact acgcctccat ctaaccaatt tttagccctc agtcccaagc cataaacacc
008281 tttttctttg tcctaatgta gcaactgctg gctacatgta tcatgcataa attatgttta
008341 atttcatgct actgttagct aatactctct ccgtcccaaa ataactccac ttttctacac
008401 gaatctagac atagcctata tccagattct tgtataaaag tgaacctatt ctgggacgga
008461 ggtagtacct atttttttta ttactttttc ataaatgaaa aattgatgtt agttcaccat
008521 tttgattttt ttataaaaaa atccatgtga tgtttatttt gtatggttat tcctttaatt
008581 ttttttgtat tcatactctg aaggtggaca atgatgctta tttcttgaat ctgagaagat
008641 ggtggaaagg tgtagatata tttaaaaagg catacataat aattcctgtg catgcagagt
008701 aagcaatttt gttgccttct ttttgttgtc atcaggaata caacaattat ttgttaccaa
008761 ctcatgagct caggtcccaa gtcccaactc ctgagttggg acctgagctg atcacatgca
008821 tatcttaacc tatctatgca acgctaccta ttcggctatt ccttacagta tattgtattg
008881 tattggtcag cgcacactgg agcttggtca ttatatgtat gcctgcaaag gaagaccaat
008941 cagggcccac catatttcat ttggattcac tgaagtttca tagcagcaga tttattttca
009001 gcaccgttga gaggcaagtg gtccaaaaaa cttctgagaa tttgtatgtt gtgtgttatt
009061 tggtgtacca ccttttttct cttaagtaca caaatacatg tgataaaggc caacattttt
009121 tcaacatgtt cttttttctt ttttcataat tgagttcccc aacttcccaa taactgcact
009181 tctgcaattg gtagaagctt agcttctggt atctgtatac tgttatttgg tgcatgcctt
009241 tttattcctc ctgcttatat gggtatgaaa ttgtttgata ctcagtttaa gctagattat
009301 ttttagtgct ttcttacacc ttgaagttgt ttacagattc cttaaagaag aatggaacta
009361 cctgaataaa actggttctt tagaagattg tcatctacat gaatcagtgt ggaagaacct
009421 tcctcggaaa attaagaaga aagcagttac agtaagtgtt tcctccctcc aaatgcaatt
009481 gcaaatgtgt gcagcttctt atcttttaaa agataacgta tactacctat atagttgaaa
009541 tttccaatag tctacttctc cattatttag ccatgcatgt atcttgcatc agacccatgt
009601 ttgtattatt tactgtgatg ttactgaaaa ctgttaaatt taagatctcc tacatcaaga
009661 ttttttttat tttattagca atgtaaggat aaatattttg gtataaggta ctgctaagac
009721 gatcatttgc aactttccat gacaatttgt cctttctact ctaagtgagc aatttcttcg
009781 agactgaagg tgttaagttc aaccaattca aaatgtacag gccgtaaact gtcaaagact
009841 caaagtttga caatgtaggg gcatggcgac aatgggtgtc tatcatgttt aggttgtgag
009901 cgaactacat ataacccaca tgccccttag gttgagcgaa ctacatataa gcagggttgg
009961 tgggattgca tgctttttct aatgtgcgaa tagactgcat ccaatctgga gcagtcttac
010021 agttgtacag tacaggtagg caatgactag gatatttggg acatacatta ccaacaataa
010081 attagggtta catttgtaga aacggaagta ctgttttctt ataaaaatta gaaaatccat
010141 aatattctgc tgaccaattc tacatcatgc cattgatgaa gtacaactct atcactacct
010201 cctatcccta agtgtaaggg attctagtca taaatctgga catgaaaatg cccagattca
010261 tagccagact gccagaatcc attatagtta gaaacggatg gagtatatgc cattcgttga
010321 cttcctttgt ttcttatgtc atcactgtta gtcaaattct ggtaaaactc catcaagtca
010381 agtagtgaac ctattgttct cagagactga aataccctca ttttctttat gggtgaaagg
010441 cagagcagag tattgtacac tagaatttta aaaaggttag attggttcca tgccatcgaa
010501 agttctcgac ttttggttta taccatcaaa agatctcggt gcactttaat accattcaaa
010561 gtttccccgt taccttttca tatcacaacc gttcacttct gttagagctt tattatttta
010621 tttttgttct cttccacatt ttgctgaaag gcaaagggga tatgtctata ctacccttcc
010681 tttacccatc taatcctgcc caatctcttg ttctttctct cgagccaatc tgaacgcatc
010741 gcttgagcat tgtgagacac ggcttccctg ttcatctcgc attcgcatgc tccacgctac
010801 catcgatgcg cataaggagg caattagtca agctagcata ttcggcatgc ataaggaggc
010861 agcagccatg gttagcaacc ttaaccaaca acaagatatt ccaaccgctc ctggagagcc
010921 agagccatgt ggttgcattc gtagataaag caaaaattgc agtgacagaa tgtggtggct
010981 atctccagag cgcccgacac tgctcgtcgt gtgcggcggc caccgtcgtc catcgagcgc
011041 agcgccgtgc cgctcctggt cggaggagca tgccgagtga gctgcacacg cgggtggaat
011101 aggggcacgg aagcaacagg accggtcatc tgacaccagc tacgaccggg gttggctgcg
011161 ggacaatgcg acgggggcgg cagctatgct ggacgaaggg gaaatatctg ctttcgatct
011221 gatatgatgc atcggggcta tgaacatgac acaagggcaa agatgtcctg cttaacggga
011281 gattcagcaa agtggacgga agtggtataa cgagtaacgt ggtaaacttt ggatggtatt
011341 aaagtgcaac gagaactttc gatggtataa accaaaagtg gagaactttc gatggcatgg
011401 aaccaatttt gccttttaaa aacgaaagag aaccaagtag gtagtaacat caaaattact
011461 tttgtgataa tagtatagtg cacatcagca catggtatcc tagaggcaaa attgtcattt
011521 tattctatct ataggtggtt gattaatgat gatgatatat acaaaggaaa ctattggact
011581 ttgtcagtgg caaatcatag aactggtgct tcatcaatgg catatgatgg aatttctcca
011641 ttagtattgt tcagaacatc ttgattctgg ctggtttgtt tgttcttggt attttgttcc
011701 tttaattatc cttgcattct tcttcctttt gttgccaggt tccacagcag gacaatgaat
011761 acgattgtgg tgtctttgtt ctgtactata tgcgacgctt tatcgaggaa gcacctgaaa
011821 ggcttaacaa caaggactca tctaatatgg tgagtcacca ttagttgagt tttcaccatt
011881 ttatatgatg gtgttctact gcctgcacgg atacttatag ctgcccttat ctctcttttc
011941 ttttttattt ttctattttc ccttgttagt ttggcgaagg gtggttccaa cgtgaagagg
012001 cttctgcact gcgaaaggaa atgcaagctc tgcttcttcg gttgtttgag gaagctaaag
012061 acaacaacca catgagagat ccaacaacac cagtgtcagc aacagcggag caccctgttg
012121 aagtcttgtc aaccgagcca gcagtaccag accaccctcg gaatgcggtt ggcgtcgcca
012181 cctcatagtt tgcaggcggc tgccatggga gctggccttg gaatgtggaa ggttggtgtg
012241 catccggaaa acatagctct caattgtctt ctccggttat gccacaagag aaggaaactt
012301 ggaaggtact gtactgggta ctatggtagg taggtctgca aagatgcgat actgccgtgt
012361 atagtttagg tagaaagccg ggttatccgc tgggctcttg gggataattt tggttcttgg
012421 ttagttctta ggctgggcta caagagaatg gtcgaatttg acaaactgct cctacaagct
012481 ctgagctgcc aagttgacag ctgcaggatc tgcttgtaaa cccatgagga aggggagaat
012541 catcagaata gctctcacct gcctgcccaa atttctgctt gtaaagcatt ctgaattgaa
012601 gttctgatgg gtatagccgt cggtggagtg gaggcacaac ttttggagtt ggatactgtc
012661 atcgctctta aaaccatgct tttggggaca cttgtacatt tggtgctagt aaaagtcagg
012721 cggcatcacg gagttc
|
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。