cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK061163     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os06g0604000 ( IRGSP 1.0 )
RAP - Chromosome No. 6
RAP - Location, Length 24775260 -  24776819  ( - );   1560(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 24775260 -  24776275 ( - );   1016 (bp)
Exon 2 Location 24776508 -  24776819 ( - );   312 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum
Os06g0604000 Os06t0604000-02 006209A04 103578 006209A04 1749 LOC_Os06g40150.1 AK061163 143


Chromosome: 6 ,  position: 24,775,260 - 24,776,819 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gaacgcacgc tacactgcaa gaaaggcaag tataggggtg gcaggtagtt tatattcact 
000061 ggaaaccgag aacttcactc ctcccagcac tccacactag gaggatgctc actgtctgac 
000121 tgactgactg gctgctgctg ctgctcattc cttctcctac tctgcctgcc tcctctgctg 
000181 tgtccttggg agaattcttc agggacagta tccctgcaga ggtgagatca tgggacagtc 
000241 gaagaagaag ttccgcggag tcaggcagcg ccactggggc tcctgggtct ccgagatcag 
000301 gcaccctctc ctgtaagtct ctatctcact agtgatgatc actagctagc tatgttgctc 
000361 tgatgtgtta tgccactgtc gtgatagata cattttgatg gatagctagt ggttctggtt 
000421 tgttgttgct ttctttcttt ttttctttct ctttcatggt atgttagtag ctaactcaag 
000481 gtgcttgggt gcgtgcatgc atgaatgatg gatgatgttt tttttgctac gtgcgttgtg 
000541 gcagtaagag gagggtgtgg ctgggtacct ttgagacggc ggaggaggcg gcgcgggcgt 
000601 acgacgaggc cgccatcctg atgagcggcc gcaacgccaa gaccaacttc ccagtcgcga 
000661 ggaacgccac gggggagctc acaccggcgg ctgcggtggc agggcgggat ggccgtgtcg 
000721 gcggcggcag cggcagctcg tcctcaatga cggccaacgg cggcgggaac agcctgtctc 
000781 agatcctcag cgccaagctc cgcaagtgct gcaagacgcc gtcgccgtcg ctcacctgcc 
000841 tccgccttga cccggagaag tcccacattg gcgtctggca gaagcgcgcc ggcgcacgcg 
000901 ctgactccag ctgggtcatg accgtcgagc tcaacaagga cacggccgtg tcgtcggctg 
000961 cgacggtggc agcagcaaca gcagtgtcgt ccagcgacca gccgactccg agtgacagca 
001021 cagtcacaac gacgtccacg tccaccacgg gctcgccgtc gccaccacct ccggcaatgg 
001081 acgacgagga gaggatcgcg ctgcagatga tcgaggagct gctgggcagg agcggcccgg 
001141 gctcgccgtc acatgggctg ctgcacggtg gtgaaggtag cctcgtcatc tgaattccgg 
001201 aagaacagga aagaaattga aaatgcaagg ttaaaacagc atgatcaggt caccatctaa 
001261 gatcaaggat ctggtagggt ggttggtgca caggcagtta agattgctac atatgatagg 
001321 tatatctcta ttactactac atatccagct taattaggaa acaattataa gatcgattac 
001381 tactgtgtga agtgaagctg tgtatttatt aaagacttac ttgtatgtac aagacgtccc 
001441 cgtcattata gtcatactgg tgaaagctct gctatgtatc aacgtcatca gagatcagac 
001501 tacatatata taagtggtgt caacttctaa taaaagtaaa taaaaacatt gtaattgtgt

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ656489 whgc6n03 663
more... (Total Hit Count: 7 )
/rice/oryzabase