cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
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RAP - Accession No.
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AK072330
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0753500
(
IRGSP 1.0
)
|
RAP - Chromosome No.
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1
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RAP - Location, Length
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33346871 -
33352886
( - );
6016(bp)
|
Exon (Data source : RAP-DB)
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Exon 1
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Location |
33346871 -
33347303
( - );
433 (bp)
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Exon 2
|
Location |
33347411 -
33348266
( - );
856 (bp)
|
Exon 3
|
Location |
33348353 -
33348515
( - );
163 (bp)
|
Exon 4
|
Location |
33349886 -
33349961
( - );
76 (bp)
|
Exon 5
|
Location |
33350038 -
33350154
( - );
117 (bp)
|
Exon 6
|
Location |
33350275 -
33350439
( - );
165 (bp)
|
Exon 7
|
Location |
33350523 -
33350613
( - );
91 (bp)
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Exon 8
|
Location |
33351247 -
33351331
( - );
85 (bp)
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Exon 9
|
Location |
33351436 -
33351618
( - );
183 (bp)
|
Exon 10
|
Location |
33352028 -
33352084
( - );
57 (bp)
|
Exon 11
|
Location |
33352171 -
33352886
( - );
716 (bp)
|
Chromosome: 1
, position: 33,346,871
- 33,352,886
bp
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|
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ctcgctgact cgctccagcc agcagcagca gcagcagcca ctgctcgcga cggaacagac
000061 gacaccacca cgacgcccgc gtcataaagg catgggcatt gtcgcaggct agccacagcg
000121 acggggtagc agcagcatca gcagcagcag cggcaacagc gaccggcatt gatagcggca
000181 gctgaggaag gaagagggcg cgcggtcgcc gcaggagcgg agcagggggg gcatgggctg
000241 ggcgggctga gcgctgagca ggagatggct ggagagcgac gccctcggag gcattaatgg
000301 cgtcgtccgc atcctcctcc tcctccccat cctcgcggcc gccgctgatg gctctcccct
000361 ctttttaccg gcccccttgg ccgtccgaga ggggcggcga gcagcgagcc accgactgtt
000421 gggccggatc cccagcggcg ggaggcggcc gggcgcgtgc caccgccatg ggcatcgacc
000481 tcaacaacac cgcgagcggc ggcgaggagg acgcgccggc gccggggccg gtgtgccggg
000541 atctgtggca cgcgtgcgct gggccggtgg tgtcgctgcc gcggcggggc agcgcggtcg
000601 tgtacctgcc gcaggggcac ctctccgcgg ccggcgccgg cggcgggatc cgcggggagg
000661 tggcggttgc cctccctccc cacgtggcgt gccgcgtcgt ggacgtcgag ctatgcgtga
000721 gtgaaccgct gtcgctcgtg gtagggtttt cgctgtgagg ccgcgcgtgg tgggctgcat
000781 ttacatgctg gactttgtgc aggcggatgc agcgacggac gaggtgtacg cgcgactggc
000841 gctgcgggcg gagggcgagg tgcaacgctg cttcaattat cttattgatt catgtgcttc
000901 cgggattggg gattggatga gattcttggg ggcgtcaaat gttggttgcc tgcatcctct
000961 tttcagcttt gggcgtggca taagctgcaa tgtgatgggt gttgaatgag ctttgatttt
001021 tattggatgt ctaaaaatag acattgttgg ttcattctaa ttttagtgag ccacataatt
001081 tgggacttac tagatctact tggccagctt gatatagtat gagtgccgtt ttctctgcac
001141 aatgtagctt catttagcac atctatcatg cctctaattt gtatattgta ccgatacgat
001201 gaattgtttt ggcataacaa attctattaa cagatttgat ttatcaatgg tacatttggt
001261 tggttcaggt atttgagagg aacttgcatg gtggtggaat cgaaagggag gatgacatgg
001321 aggatggtga tgaggaaagg aagtccagga tgctgcacat gttctgcaaa acactaacgg
001381 cctctgatac aagcacacat ggagggttct ctgttcctcg tcgggctgct gaggattgct
001441 ttccacctct ggtgatgaga ttagaagttt gatttgtttc ctattgactc ttcaagtgac
001501 tgcttgtctt gtgatgtaac tctaacgaag tttgttttct ttcgtgcctt aataggacca
001561 caaacagcta aggccttctc aagagcttgt tgccaaggat ttgcatggag caaagtggag
001621 gttccgccat atttatagag gtgacatccg agtacttgat aagggatatg caatgccctt
001681 gttacacaat ctatttattt aattgctagt aaatgtttga tttgatacct ttgtatcgga
001741 aacttgtacg tcatactcat gtttgatgat cgggcatata cagagcattg ctaaattatg
001801 tgtgactgtt ttagctttga aagaggtcag gaagtatttt agtcaatgct acaaaatata
001861 tggcaggtgt agcttttcaa ctctttgaat gtttgacatt ctaagtggtc agtagttttg
001921 cctgtctgaa ctgcgcgttc agtcgtcttt gccattccct aggatgcaaa ttatttcctt
001981 cctagttcat cttctgatac aatttatgtt attcttttgt gacttccatc actttgttat
002041 atatggtgtg ttatctctgc agtgaaaatt acttctgtta ataaaactgt acaattttgc
002101 tcagatagta gtgtccttga aacagtggat agaggatgct ctccaatctt attgttgtcc
002161 aagccaatat ctccattttg attacaaggg aaatgcacaa gttatcttgt agttatagca
002221 tgtgatggag caaagtatga cattatgaat ttttaacatt cttttcattc caggtcaacc
002281 tcgcaggcat cttttaacaa ctggatggag ctcctttgtc aataaaaaga aactggtctc
002341 aggggacgcg gtgttatttc tccggtaatc acttgatcca ggtgttaacc ataaagctaa
002401 tgctttcttg tctatatttt ctaacgaagc attttaagcg tttgcagggg tgatgatggt
002461 gagctaagat tgggtgttcg aagagctact cagcttaaaa atgaagcgat tttcaaagct
002521 tttagtagcg aaagttcaaa gatgcgcaca ctgtcggctg tggctgattc cttgaaacat
002581 ggaagtgttt ttcacatttg ttacaaccca aggtctgctg aataaaacat atagtgtttc
002641 attttgtgtg gtccaactca atacaatgtc attttctctg gggcagttgg actatatatc
002701 cattcacata ttgtaatcat tggactttgt agggctactg cttctgagta cgttgttcca
002761 tattggaagt tcgtgaaaag cttcaaccat ccagtttgta ttggaatgag gttcaagttt
002821 cattttgaga gtgaagatgt taatgagagg tttgcatttt tcagttgaac tatctttttt
002881 tgtttttgca taatactttc ttgggtctta ctatctgtgt tgtaggcgtt ctggaatgat
002941 tgccggtgtt agtgaagtag accccatcag atggcctggt tcaaagtgga gaagccttct
003001 ggtatgcatt tgagctgctt ttttattaag cttgttgact acggaacatt aacttttggc
003061 tacctgccaa gtctttgaaa catatattag ggcaccacat atagtcaatt tcagttactg
003121 ttttgtctat cggattaaat gtgaggttat ttcacacatt aaaataaatt catcaagtta
003181 gctgaagtgc tgaactcttg aatatgggtg caacatcctt cttgtcaaac tcaaattttg
003241 aatccaagcc tgatcttgtg gagtagagaa attacttagg atgttctatg atcttttgtt
003301 tgtgagtaaa tatgtgcaaa cattaataaa tgctcaagtg agaactgaga agttgtcgaa
003361 ataaattcaa tacgtaataa aaatggtgtg ctataaaaat gattagatga tttgtatcac
003421 tttgattcct acattttgca gtctcttgct tagcccacat tagtggttgg gacaaatcat
003481 attagtcaat tgggatgata tatcaagaat aaaatgccaa cccatctaaa gggaatcaga
003541 acaaatggtc ttgtaagtcc ttgaggcacc ttaagacaaa tggtcctcgc atgcatttct
003601 ttttcacact tctgatccca agattcccat gtaggtttac cattagcaga tgtcagatag
003661 agaattgttt ctgctggagt aaaatttctt aagtatctag gcttttgtag tttgagaact
003721 ttgtagttcc tgcatttcta ttaatagaaa tggggagttt ggccccttga taaaaaataa
003781 gatagagaat tgtttcacgc atatttggat tgaaaaggac aataatgatg taggatgtgt
003841 acaatctgtt tatccgtttt gctgtttata acatctggtt ggcagctaaa aaaaactctc
003901 ttgatgagga atttcgttgg tcttctgcca gttgccaatg tttgtcgccc tatgccgccc
003961 aatgaagctc attgagcaca caggagaaac aaaacagtga agagaatact agaggcatgt
004021 tattattgct tgctaatatg ggctggaact tgtttgcttt cataatgtaa gctgtaagga
004081 tcatcaaagt tgtgcaaaac caattattta gaggatttac taactgtaac catatacatt
004141 ttaatgctat caacaccttt tatgatggca tccatgtctg tttaggtggg gctaaatatt
004201 ttttattgga ttggaccaag accacattat caaggcccca taggaagcct aacagcttag
004261 aatttttata gattttgatt tgtccattat aaatcgttta tggtgaatct attgtcaata
004321 ttacccaaat tcgctaatgt tagcaatttg atttgctgtc ttttcataca ggttcgatgg
004381 gaggatgcta ctgactgcaa cagccaaaat agagtatctc catgggagat tgagatagtt
004441 ggtggttcaa tctctgttgc tcattctctg tcggcatcca gttctaaaag aaccaaatta
004501 tgccctcagg gcaatttgga cgtgccagct ctgtgtgagt tccaagagca cgaggtcaat
004561 acttggatct ataaattctt taaccctata tgcttattgg tttttgtgtt aatcctgtag
004621 atggaaatgg tcgtccagac tcggtggaaa ctgaaaagtt ccccagggtc ttgcaaggtc
004681 aagaattgat gggttctagg acccatcgtg ctacttgttc tcctcagtca atcgacatta
004741 caaaaagtaa gtcttttgat gcttggagat tccttactga tacacgaagc tgcatgttgg
004801 gcagttcaac aagcagactt ccagtgcagt actctggcta tacccaccaa tctgtaagct
004861 tcggtgaatc tattggattc ccagaggtct tgcaaggtca agaaatttct cagacagttc
004921 ctccgtttca aggaatgttg cctgatgcat gttcagcgaa aagcagatat gaattaaaga
004981 attatgtgtg caccccagct accatgaatg gactatcatc tgcaaatgaa ggatattgtc
005041 tctccctgtc aactgtgcca ccttctccac cttccagtct tatgttatac caaacagggg
005101 taccacagct tgaattggca agcaagaaca atgacaaaag tggaaatgac agccaaccag
005161 ccttgcgaca gcacaagttg ctcagtgaaa ctagctggga ccagtttaaa attggaaagg
005221 cttcaacacc tgggaatgct actaagcctg gtaatggtgg aagggaggtt gacagaacta
005281 gttgccgcct ttttggtttt tccttgaccg agaagattat cccaacagac aaagatggtg
005341 aaaaggaagt gagttatgaa actgattgcc aaaatccacg gatgctagac ttgtttgggt
005401 acaattgcag tacgcctggt gctcttcatg ccctttgtgc tgctcctttg ggaatatgat
005461 gctacttgag taactggtat gctctagttc ttccttactg ctgaaaattc acttctcctg
005521 tacctttgga cctcgtactc taccattatc caaaagctaa tttggtcact gacatttaca
005581 cagggaggga tacgtacatg tggagacgca gccactccac gcttcatccc agatgtaaac
005641 ggcatcggtc tggttatggt cccaccgttc ctgatgcttt gcatgtaggt attgctgcct
005701 cacgcctgaa tacctacgtg cggtcaggcg aataaagcga ctcgattgta tgtttgactg
005761 cagctctagc tgtcgagtcg gaagggcgat gatgtttatc gtcgttaatg taccatcggc
005821 accctgttta tgcagaaatg tggacctaat tattatgaac ttatttcctt agttctatgt
005881 atggttagct tctgatctag acctagttat gagcctattt cagaagtgct atgtatggtt
005941 tgcttgtcaa catttgtttc tgtatcggta caaatcacta tgtttgtatg tttattatgc
006001 acttcttttg tgtttt
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。