cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK102633
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0455500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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22471038 -
22477828
( - );
6791(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
22471038 -
22471533
( - );
496 (bp)
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Exon 2
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Location |
22471760 -
22471840
( - );
81 (bp)
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Exon 3
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Location |
22472006 -
22472076
( - );
71 (bp)
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Exon 4
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Location |
22472147 -
22472213
( - );
67 (bp)
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Exon 5
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Location |
22472350 -
22472418
( - );
69 (bp)
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Exon 6
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Location |
22472531 -
22472681
( - );
151 (bp)
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Exon 7
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Location |
22473070 -
22473145
( - );
76 (bp)
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Exon 8
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Location |
22473621 -
22473724
( - );
104 (bp)
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Exon 9
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Location |
22473831 -
22473927
( - );
97 (bp)
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Exon 10
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Location |
22474000 -
22474086
( - );
87 (bp)
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Exon 11
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Location |
22474171 -
22474257
( - );
87 (bp)
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Exon 12
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Location |
22474345 -
22474434
( - );
90 (bp)
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Exon 13
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Location |
22474560 -
22474637
( - );
78 (bp)
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Exon 14
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Location |
22474750 -
22474914
( - );
165 (bp)
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Exon 15
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Location |
22475053 -
22475203
( - );
151 (bp)
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Exon 16
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Location |
22475765 -
22476042
( - );
278 (bp)
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Exon 17
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Location |
22476227 -
22476388
( - );
162 (bp)
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Exon 18
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Location |
22476479 -
22476685
( - );
207 (bp)
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Exon 19
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Location |
22476788 -
22476859
( - );
72 (bp)
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Exon 20
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Location |
22477653 -
22477828
( - );
176 (bp)
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Chromosome: 5
, position: 22,471,038
- 22,477,828
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 tctatccccc ctctactcgc ggctgcggcg gcaaggcggc gagacgtggg agagggattt
000061 acaggtagag ggagagggtg gaggaggaga ggctgaggct aggaagcggt ttcgccatgg
000121 cgagcgtcga cccgtcccgg agcttcgtga gggacgtgaa gcgcgtcatc atcaaggtga
000181 tttttgtttg gccgctgggt cgcaggagtc gccgtcacgg attgaccttg atagatctag
000241 tttccgagga ttcgtgcgcg tctgcttggg cgctgtttgc attgtttgcg ctcctcttct
000301 ccgtattcgt gagattgttt ctggatcaaa tttaccgggc gagtgttttg ttcagagttg
000361 aagactcgag agacgtttga tttgggattc tcgttgttag attatcagga gtggggcttt
000421 gcttgggctt ttctgtggtt tacttgatgt gacggcctat gtcgaagttg ccaatctttc
000481 gactctggta ggcatcatca tgggaaaact gttggctatt tcgctgcggg gcagcggatt
000541 tctgtcagat gggaattggt gggtggaatg gcacagaaat agaaaagaga catagtatct
000601 tatattggag cgttcggcaa atttctgtcc cttgcgatcg ctctcacaaa ttcgtgtttg
000661 tttcatctgt gacacttttt atttgttcaa atcccatgct ttttccaatt tttttataaa
000721 aaatatgcgg aactggtgaa ataatgtctg aattggaaag gtgatgagaa tcgaataatg
000781 tagaatcaaa taccgttgct tttgagttta ggctttggaa aagcgtttag gctttagaaa
000841 agcctagcag ttttgtggaa cctcaacgca ataccttcaa cacaagatgt accactgtac
000901 cagtacataa taataatata ataataatgt ttttatctct gtgcggctaa ttcctttttt
000961 gcatgacagg tgggcactgc agttgtctcc agacaagatg gaagattggc tttgggcagg
001021 gttggagctc tgtgcgagca ggtaaaagaa atccattttt ttgatcttgt gagctgttct
001081 gcaatggcta tgtagtgttg gatatgttgg caggtgccta accaaagaaa agtggcaatg
001141 caggttaagg aactgaactc tttaggatac gaagtgattt tggtcacctc aggtgctgtt
001201 ggagtggggc gacagcgact taggtaccgg aagcttgtca atagcagctt tgctgatctg
001261 caaaagccac agatggagtt agatggaaag gcttgtgccg ctgttggtca gagtggactg
001321 atggctcttt acgatatgtt gtttaaccaa gtgtgtttat tagtctggca ttcaacttca
001381 acaaaaatga ataggttact ttttgtatct ttttgtaacc ttgaacttct tgcattgcag
001441 ctggatgtct cgtcatctca acttcttgtc accgacagtg attttgagaa cccaaagttc
001501 cgggagcaac tcactgaaac tgttgagtca ttattagatc ttaaagttat accaatattt
001561 aatgaaaatg atgccatcag cactagaaag gctccatatg aggtatgtaa gtgtgtttca
001621 taccatacat ctcctggaaa agtatgaaac ttcagttttt gcgtggtgct gctctttagc
001681 tgctacttat tgttatactg cttgtatgcc tagccctagg gccttgtcag tgtatatgca
001741 aatagccatg actttctaac cacactcacc tataattctt ttacaggatt catctggtat
001801 attctgggat aatgacagtt tagcaggact gttggcactg gaactgaaag ctgatctcct
001861 tattctgctc agtgatgtgg atgggttgta tagtggtcca ccaagtgaac catcatcaaa
001921 aatcatacac acttatatta aagaaaagca tcagcaagaa atcacttttg gagacaaatc
001981 tcgtgtaggt agaggaggca tgacagcaaa agtgaaggct gctgtcttgg cttcaaatag
002041 cggcacacct gtggttatta caaggtaaac aatctattcc ctagagtata atggatatga
002101 ctgctagcat caatcagatg cactccatta tatatgtatt gtcaaatttc ctgtcaagtg
002161 caactagcaa tcagtaccat ctgcaggtgt tctggttgga ttatgtcatt gccagatttt
002221 tttgcatgag tttatttcta atgtgaagat tattaagtcc tacaagacat ccaatcccaa
002281 caactccact tggcctcaat tataacatct tgaatgagat gcagtccagt gcttgaatgt
002341 tagcttcgtg gcattaatgg atgagctgtt ctgactttaa acacccctag tttacgctaa
002401 aaaaatgatt tgttttgaga cctatatgac cttgcatgtt acgttgaaac tttgcttatg
002461 atggttcaga catttaatgc ttgtaatgta ctgcacatca aattcaaatg attatcttgt
002521 tgtgttgaag ctaattatca ctgagataac caagttcatg agttgcaagc tatttttatc
002581 ttcttaatga atggagaaat agtttatttt tttctatcct tgaagtgggt ttgaaaatcg
002641 gagcattctt aaagttcttc atggggaaaa aattggtact ctctttcaca agaatgcgaa
002701 tttgtgggaa tcatctaagg atgttagtac tcgtgagatg gctgttgccg caagagattg
002761 ttcaaggcat ctacaggtat atatctttgt caaatcatac gtaattcttg tccctctgtt
002821 atgcccagtg gagttacaca ctatttcaag ttttagctca ctatttttgc tcacccgtga
002881 tactagtctg ataccatatg ttcgtttgaa acagaatttg tcatcagagg aacgaaaaaa
002941 gatattgcta gatgttgcag atgctttgga ggcaaatgag gatttaataa ggtctgagaa
003001 tgaagctgat gtagctgcgg cccaagttgc tggatatgag aagcctttgg ttgctagatt
003061 gactataaaa ccaggaaagg tggacccctc attttccttg ccaaattaac tgatttgtta
003121 aatatctgac acttctcttt tcttatgtat gttgtcttgt ttaactcata ttatatttta
003181 tgtttttgca gatagcaagc cttgcaaaat ctattcgtac ccttgcaaat atggaagacc
003241 ctataaacca gatacttaaa aagacagagg tgaatgccag cctttttaat agaaactctt
003301 tttaatagaa atctgctatg agatttcaca gaaattctag attctagatg atatatccat
003361 agtgatttta acaaaaagat ttcccctttg ccaggttgct gatgatttag ttcttgagaa
003421 aacatcttgc ccattaggtg ttctcttaat tgtttttgag tcccgacctg atgccttggt
003481 tcaggtattt tgttctggca atgcactgtg ttccattctt ttccagaata catatacttc
003541 taagtaacta attttgtgtc attgttgtta gattgcatct ttggcaattc gaagtggtaa
003601 tggtcttctc ctaaaaggtg gaaaagaagc tatcagatca aacacgatat tgcataaggt
003661 attatccttt tatcttgtgg ttaaaattgc tttctggttt tgctttaact gttgtaaaaa
003721 acatcgattt attcttttct aggttataac tgatgctatt cctcgtaatg ttggtgaaaa
003781 acttattggc cttgttacaa ctagagatga gatcgcagat ttgctaaagg tgtgtatgca
003841 attctatatt ttcaaagcgt tgatactacc aatttggcta aacccgtaat acactgtgca
003901 gcttgatgat gtcattgatc ttgtcattcc aagaggaagt aataagcttg tctctcaaat
003961 caaggcgtca actaagattc ctgttcttgg gcatgctggt aaattctgtt tgaacttaag
004021 ttcttaccac tcttatggct ttattggatg ttgagttttt ttttcttttt gctatttctg
004081 acattccata tttccccact gcagatggta tatgccacgt atatattgac aaatcagctg
004141 acatggatat ggcaaaacat attgtaatgg atgcaaaaat tgattaccca gcagcctgca
004201 atgcaatggt atctatccag tttgctaccg tgtatagtat tcaaatagat tgcttttaca
004261 gtttcagtta ctttttggag tatctttcac tgaatatttt ggacaatttc aaattctctt
004321 ctaaccatga tgctctggtt gcaattcttc tctggcatct gaaaaatgca tttagtactg
004381 ttgagattat tacagcccct ccacttctat ctcatgcaaa ctatttttat tgatagatga
004441 tagttataac tgcacttttg aattgtttaa attgatttat aactacttat attgtgattg
004501 cataatgctt attcttacaa agtagtaact tcctctttcc tttgtaagaa aatttagcta
004561 catatcttga tagtcttcta ctgttttcag catgttgata attccacctt ataatttttc
004621 tgaacatcat gtagccattt tttatattca gataacagcc tattttacat gtatgttctg
004681 caggagacct tactagttca taaggatctt atgaagagtc caggccttga cgacatatta
004741 gtagcactaa aaacagaagg tttgtttttc tactctctta tactatagaa acggctcccc
004801 tctgaagcaa ttttgctcaa taccatcaca aacagttgca actttaaatt accaaccact
004861 gtgatttaat ggtgataaat accattacaa acaacaaaaa atcttgaaaa tatatgaata
004921 caaacgcgac ccttctctta tggcaacaat ttccaaccaa gtttgattgg ttacattgtg
004981 attggttaac aagcatgtat atagaaacta cttcgatgct aaaagcaacc aaagtaacat
005041 gacataatca cagatgtagt atgtttctgg atactggatt gttttttact tgtatataca
005101 gggccatgat tttctccctg cttcttagat aatgctgtat atttcaggag ttaatattta
005161 tggtggacct attgcgcaca aagctctggg atttccaaaa gctgtttcat ttcatcatga
005221 gtatagttct atggcctgca ctgttgagtt tgttgatgat gttcaatcag caattgacca
005281 tattcatcgt tatggaaggt acctaatagt tgtgactcct gtctccccct tatcccatag
005341 tactagttgt tttcttaaac aaaaaatgag attcaatgta acccaaattt ccatattcta
005401 tctgtttcag tgctcataca gattgtatcg tcactacaga tgataaggta gcagagactt
005461 ttctacgcag agttgatagg tatgtttaaa cattaattcc cttattactt aatggttaca
005521 ttatttgttc cctattgatg cacaattatt ttcctgtcaa cttatgatga acggatgttt
005581 aactaatgtt ctgttctact tctcaatttg aacagtgctg ctgtatttca taatgcaagt
005641 acgagattct ctgatggggc tcgttttgga ttgggtgctg aggtacttca aattttacat
005701 gccatttacc tttctttctt aattgctgaa cttattggaa tatcttgaat aggttggcat
005761 aagcacaggg cgtatccatg cccgtggacc agtgggtgtt gaaggtctct taactacacg
005821 atggtatgga atcaatcgtc tctgttgcag tatctcatct tgccttttgt atggcaattc
005881 accccgttta tgttagatat acatttatat gttgcttttg gatcgtatag aaggttaaaa
005941 agtgacgtgt tttccttggt gatttttatg attaattttg atatgcagga tcttgcgagg
006001 gcgtgggcaa gtggtgaatg gtgacaagga tgtcgtgtac acccataaga gtcttccttt
006061 gcaatgaggc aagtaataca cttattgctt tgaatgtgtg atcttctcaa gatttccttc
006121 ttcacagaaa gtgtatttac catgtttacc tactcaaatg atatgctata cttgcagttt
006181 ggttaataaa aacagtttca gtcatatgat atgctatatg actctttctt atttttatat
006241 gttatatatt agagaagtgg agataaataa actcatcctg aaactacttt gcaggtcaaa
006301 tgctcctttt agcctgttca ggagtaggtg aatatccttt taagaatgga ttgactactt
006361 tattttgtca tcttgtacaa gcatcttatt gcggcattcc gatggattat tgattttggg
006421 ggtcccactt tcaaatgtga caccaaaaat aaattcatca gttctgagag caagattttg
006481 gaggttcagc ttctccatgt aataagtaaa ttcagttctg agaacttgtg taccaacgcg
006541 ctatgttgct tgtaatgagc gatactaaca tctgtgattg cacatatact aattgctatc
006601 tccacttttt caatcatgct acgacatatc gccgtggatg catatatttg gtagcataga
006661 ttcctcagct gaggctctac ttgagcttcc ccttttgttc tgataaacat cactaattgt
006721 ggggttccgc tttcagttct gagaaggttc cgctttcaaa cgtgacacta caaataaatt
006781 cagttctgag c
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
