cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK064884
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0134000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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1974069 -
1977838
( - );
3770(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
1974069 -
1974543
( - );
475 (bp)
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Exon 2
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Location |
1974644 -
1975000
( - );
357 (bp)
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Exon 3
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Location |
1975088 -
1975183
( - );
96 (bp)
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Exon 4
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Location |
1975260 -
1975310
( - );
51 (bp)
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Exon 5
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Location |
1975402 -
1975542
( - );
141 (bp)
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Exon 6
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Location |
1975622 -
1975678
( - );
57 (bp)
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Exon 7
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Location |
1975797 -
1975871
( - );
75 (bp)
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Exon 8
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Location |
1975957 -
1976229
( - );
273 (bp)
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Exon 9
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Location |
1976336 -
1976395
( - );
60 (bp)
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Exon 10
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Location |
1976510 -
1976602
( - );
93 (bp)
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Exon 11
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Location |
1976682 -
1976868
( - );
187 (bp)
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Exon 12
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Location |
1977686 -
1977838
( - );
153 (bp)
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Chromosome: 5
, position: 1,974,069
- 1,977,838
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 tctccctccg aatcctcccc cgcattccgc gccggagctg aggagggaca gcgagccagc
000061 gagggaggtg gggcaatcca gcgagcgcca gatcgtgccg ccagccccgc tccgtcctct
000121 ctccggcgac cctccgcccc gcctgatccc gtggtaaatc cctctcgcct ctgtttcttg
000181 gatcccgtgg ttcttctctc tgcttgttct tgcccgattc gacggttgac gcggccgtgg
000241 ttgctcttgg atcgtggctt ggttggattt ttctttttca aggggtggaa gggaaagctg
000301 gttctttttt tttccttctt tttctttttt ttttttggtg tgtgtgttcg tttgttcttg
000361 tgattttctt gggggtgggg aagatggtgg cggtttccga ggtcggatcg gatacttgtt
000421 cgtcctgctg attttgcatt ttgatcggtg attctggtgg ctttcttcta tttggatgat
000481 gcgtgtgatt ggagggagat gagttgatgg gggaaagatg gtttagtttg gttgatgcaa
000541 aatttggtgg tctctggatc ggtgaaatgt tcccttctct tggctgttat ggatagcaag
000601 catgggtgga tgaactggtt gattcttgaa agctaccgcc tcgggataat ctcccaatga
000661 tcgtggttga aaatatcatg ataaacgggg ggtaattggt acagattagc attctaatat
000721 cttcagattc tgtgtttcga ttgagctaga aaagtaacac tccagttttg ataacaactc
000781 ggcatccatc atggattccc aaagtttcat ttcttctttt tttttctttt cctgtacctt
000841 caagcctacc tgccaattgc caacacaaac tgtctgtgaa tgtgcttctg gcacctaatc
000901 tcatcacatc tttcttaagt aaaaacactg ttgtgacttt gacttaccat tattatgctg
000961 ttgtttgcag gtggatcaac tacaactcat ctttaggaaa gcctcttgaa cattagcctt
001021 gtgtgccttt caacagtatg gcctcggtag gtgtggtgcg ttcttccttg gggtttcaga
001081 acgaaacaag tacaagtggc gatgccgacc gacttccgaa tgagatgagc aatatgagta
001141 taagggatga taataaggta ttatgcctaa gagtggtgga tcatagttgc cttttgctgt
001201 attgtcagtt gctgatttga ttcacaaacg tcgcaggaca ttgacgacat agttgtcaat
001261 ggcaatggga cagaacctgg tcatgttatt gtgacaagca ttgatggaag aaatggacag
001321 gctaaacagg tactgttcac aaaacaagca caagtgatat tatgctgatc cttttgtgtc
001381 catttagtgt tgcctgggaa cacaataagt ttttgttcac tgaattatct atctacattg
001441 cagaccatta gctacatggc cgagcgtgtc gtaggtcatg gatcctttgg aactgttttc
001501 caggtttgtc tttagacaga tcgatttatg ttgcacttgt tcagtgtgtt aatttgtgtg
001561 ttctggtggc gattgatgaa cccttcattt cttgaatgat cttgtatagg ccaagtgcct
001621 ggaaaccggt gagactgtgg ctataaagaa ggttcttcaa gacaagagat ataagaaccg
001681 tgagctgcaa acaatgcgag ttcttgacca cccaaatgtg gtgtcactaa agcattgttt
001741 tttctcaaag actgagaagg aggagcttta cctcaatttg gtgcttgagt atgtgccaga
001801 gactgctcac cgtgtaatta aacattacaa caagatgaac caacgcatgc cattgatata
001861 tgcaaaacta tacatgtatc aggtaacgtt acacacctag atcttctaat ctatcctagc
001921 acaattatgc attgagtata acatggaaaa cctattataa ttgacagata tgcagagctt
001981 tggcgtacat tcacaacacc attggcgtgt gtcacaggga tatcaagcca caaaatcttc
002041 tggtatgtta catacttgca tttagttata atctgttttc cacttattga agctttgtgg
002101 agttagtcaa gtactaagtt ttgtttagtc agatggttgc taaaagatta ttacttccag
002161 gtgaacccac atactcatca gctgaaatta tgtgacttcg gcagcgcgaa agtcttggta
002221 tgatcactca ttaccagata ctcacacgaa cattgccatt gtctgttgta cctaatcttt
002281 tgttctatta ttataggtaa aaggagaacc aaatatttct tacatctgtt caaggtacta
002341 cagagctcca gagctcatat ttggtgctac tgaatacaca acagcgattg atgtttggtc
002401 tgccggttgt gtgcttgctg aactcctcct ggggcaggta agagatcaca ttatttacat
002461 gaggcttttg gaccatccag ctcattgcaa ctgtctgcct aagctttatc ctttttttgt
002521 tttaaaagcc tctattccct ggcgacagtg gcgttgatca gcttgttgaa atcatcaagg
002581 taaattatat cttgcttcca tcgaaatcac tccctttttg ttgtttacct cctacttaac
002641 tgactattct ctcaggttct gggtacccct acacgagagg agattaagtg catgaaccca
002701 aattacaccg agtttaaatt tccgcaaatc aaagctcacc catggcacaa ggtagaagaa
002761 aataatctta tgttggactg tttatttttt attttagggt tgaaacctaa tgtagctttc
002821 cttttttttt accaccagat cttccataaa agaatgcctg ctgaagcagt cgatctcgtc
002881 tccaggcttt tgcagtattc accatacctc cggtccactg ctgtgagtgt tgtcgttgca
002941 ctatttgagc caacaccatt ttttagagaa agttttagtt cttggcatca ctattgtgtt
003001 acatttttct aattacttca tcatacaaac atgcactgcc ttgccaagta ctagtagtta
003061 cagattgtgc atttctttat ttgccattac agtcggaagc attgatccat cccttcttcg
003121 atgaactccg tgatccaaac acccgcttac cgaacggccg tttccttcct cctctcttca
003181 acttcaagcc ccatggtaag cttgcaacac cggctgacat atgacatgcg tagacgaaaa
003241 tttctgaacc accgatcaac ttataattat ctactaatct ggccgatttg aacagaactg
003301 aagggtatgc caatggaatt cctggtgaag cttatccccg aacatgctcg aaagcaatgc
003361 gcgtttgtag gatggtgatt tctgaggtca gcatgaaaac tagttcagaa tttcttcacc
003421 gtcctccatt agaaagcaga gatgaaccct gtgtgcagcc atttgggaaa gctggtgcat
003481 atggaagtgg aactacattt ttttgtccga gattctgacg ccgcgtattc ttttcccccc
003541 tcccactttg ctgctgccgg tgtaaccaaa aaatcatcca cggttctgta aagttgatga
003601 agaagagtgt aaaatcaggt tgaaaactga attcgatcgg tttgtcaaga ttgtagcaac
003661 atgcaaggaa ggatgttgca cactttgtat ggcaatgttc gttcggtcca aatatttgga
003721 catggatcga gaggctattc atttaattgt acttgctgct acatgttctt
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
