cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK107524     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0678400 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 35154500 -  35155919  ( - );   1420(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35154500 -  35155353 ( - );   854 (bp)
Exon 2 Location 35155678 -  35155919 ( - );   242 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum
Os04g0678400 Os04t0678400-01 110376 002129F12 17075 LOC_Os04g58190.1 AK107524 35855
Os04g0678400 Os04t0678400-01 110376 002129F12 17075 LOC_Os04g58190.2 AK107524 35855
Os04g0678400 Os04t0678400-01 110376 002129F12 17075 LOC_Os04g58190.3 AK107524 35855


Chromosome: 4 ,  position: 35,154,500 - 35,155,919 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ctcccgagag agacgatcga gatcacgcgc ccacagaaac tgcagattaa gcggcagaga 
000061 ttgtagatag cgcgaggtta ttaaggccag cagtctgacc gcgcgcggca tgcccttctg 
000121 ctgctgcaac cgaccaaatg gctcctgcgg ttgcctcctc cccgtcactc gtgctctccg 
000181 ccgccgccgc caccgcctcc aacaagcgcc cggccgattc cgacgcctcg ccgccgcacc 
000241 aggtcagtta attactcggt tacatactta attacacttg cagatgcagt tgcatattag 
000301 ctgtggaagt gtgtagggat atacgtggtt tttagctagt gttgctgttt ctggagattt 
000361 gttgagaatg tagcgtggct cgctctttct actttctaga gtttgtgttt agccgttctc 
000421 tggcataagt cggtctgact gattgtgttg tgtaactaca atttttttat tctaatatac 
000481 tacgtgtaat cttttttgcg tgttcacgaa aaaaatgaag tgcgtaggga tcggccagtg 
000541 atgtggatgt ggtttttgat ttgcagggag atcgcacggg gcagcaggag aagaagcagc 
000601 agcagctgga gtgcccgcgc tgccgatcca ccaacaccaa gttctgctac tacaacaact 
000661 acagcacgtc gcagccgcgc cacttctgcc gcgcctgccg ccgctactgg acgcacgggg 
000721 gcacgctccg cgacgtgccg gtgggcggcg cctctcgccg cggcggcggc ggcaagcgcc 
000781 gcagggtctc cgccgacgcc gacccttcct cggcgtcgcc gccgccaccc acgacttcca 
000841 ccacggacgc gtacgccgac ctcccagccg gcttcccgtt cctcagtgac ggcgccttcc 
000901 tgccgcagtt cggcctcgcc ggcgttgcgc cggccgcgtt ctcttgggca tcggctgtcc 
000961 ctgacttgta caactgcggg atcgcgccgt gggacgatgg aacggcggtc accggcgcgg 
001021 cgtgggacaa cttcgccgac atcgccggcc ttgatctcag ctggccgccg ccgggtaact 
001081 gacgaacagt acacagctgg tcgctcgtgt tttggggggc tccggtttta gcaaagcagc 
001141 ctcaagtagt gcgttcttcg atcggtatgc aggtagtgtg ttcttcgatc ggtatgaagt 
001201 atattttgct gagctaggga ttatgatata attattggga atgtaattaa gcagctcaat 
001261 tatccaacgt ggtgtttgca gttttcttct ctcaccaatt tcatacgctt gcacaatgat 
001321 gtggtgatta tcattgggat cagtgaatcg tgatctgtag ctggaagatg tgtttacgta 
001381 tgtgcagtgt taatgacaat aataagagtt tgttgccatc

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
BY845224 bart16f07 531
more... (Total Hit Count: 7 )
/rice/oryzabase