cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
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RAP - Accession No.
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AK107637
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0727000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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30407342 -
30416860
( - );
9519(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
30407342 -
30407912
( - );
571 (bp)
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Exon 2
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Location |
30408991 -
30409223
( - );
233 (bp)
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Exon 3
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Location |
30415904 -
30416048
( - );
145 (bp)
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Exon 4
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Location |
30416134 -
30416255
( - );
122 (bp)
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Exon 5
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Location |
30416394 -
30416411
( - );
18 (bp)
|
Exon 6
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Location |
30416588 -
30416860
( - );
273 (bp)
|
Chromosome: 3
, position: 30,407,342
- 30,416,860
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aggagagctc gatcgctgca ccaatacttc actggagatc gcctagctgc agctagctag
000061 cttatcctgc gtgtcttgag cttctctcat ggaggagatc tcccaccact tcggggtcgt
000121 cggagccagc ggcgtccatg gcggccacca gcatcagcat caccaccacc cgtggggttc
000181 ttccctgagc gccatcgtcg cgccgccgcc gccgccgcag ctgcagcagc agcagacgca
000241 ggccggcggc atggcgcaca cgccgctcac gctgaacacg gcggcggcgg cggtcggcaa
000301 cccggtgctg cagctggcga acggcagcct gctcgacgcg tgcggcaagg cgaaggaggc
000361 gtcggcgtcg gcgtcgtacg ccgccgacgt ggaggccatc aaggccaaga tcatctccca
000421 cccccactac tcctccctcc tcgccgccta cctcgactgc cagaaggcaa gtcccacaca
000481 catgtggtag cctagctagc tacctccatg catgcatgct ctcgccgccg cgcgcatctc
000541 ctacatgatc tcatgtcaag ctcgctctca gcttacatag cgtatgtgtc gtggtgggtt
000601 gcaggttggg gcgccgccgg aggtggcggc gaggctgacg gcggtggcgc aggacctgga
000661 gcttcgccag cgcacggcgc tcggcgtcct cggcgccgcc acggagccgg agctggacca
000721 gttcatggtg agctcgcaat ctctcactct ctttgttgct cgccttcctc ttcgatatct
000781 tgagctcgct cgccggcggc gtgcgtgtgc aggaggcgta ccacgagatg ctggtgaagt
000841 acagggagga gctgacgagg ccgctgcagg aggccatgga gttcttgagg agggtggaga
000901 cgcagctcaa cacgctctcc atctccggca gatcgcttcg caatatcctt tcctccggta
000961 acacaacaca tccatccatc cttccatctt cttctatcca tgtactaatc cattgcatgt
001021 catcttcttc gatcgatctg ctggtttata tcacggtttc atcggctttg ttcttgctgt
001081 cccttttgtc catttgattc gatctatttg ctggtttgct gacggtttga tttggtctat
001141 ttcttgcatc taccatgtgt gatttctggg ccaggaaaaa cgcatctgtg tgttcatgtc
001201 ttttttttcc tcgtacatgc atgcgtgtca gtgaaccctg cagatgatct ggtctgctgg
001261 ctcggtgttt ggtgctctaa atcccgcaag ttctcatcag ggtttccaaa agattctttt
001321 cccctgattg cttttcttgg ccatgcatgt gggattcttc catctgggct tctaccgctg
001381 atcatttctt ctgttgggaa ggaatagtag tcaccggcac atgtgcatct cagtgttcag
001441 tgcagctact agcacactga cgattttgtg gtctggctct tcagatatct cctgatgttt
001501 ttgctatatt taaaatcgat accctgatta gaaaaagatt aagctaaaga gtttaagtac
001561 atttcgcaaa acctggggat tcgggacatt cgtaacatta tctggggtag tgctaaacat
001621 ttttgcccca aatcttaagt ttcttgaaat aaactgcaga accttggggt ttttacatta
001681 tagatatccc aatacctagg gttttcggaa attaataaat ctactgtaag ctaaatcatt
001741 ctaaaatcat agtacatctt catctccatc ttcatcttga ggaataatat gtccctaata
001801 tcattgaggt tctcccttgg gttctcttgg cgtttatgca actcttttat ttttttttag
001861 ataatggaaa attttatata ctatgcctct catgccggca gctggttgag tttcgattcc
001921 ctttctgaaa gaacatgtgc atgtgactct cccgagtaga gagaagaagt tctttggctc
001981 agccacatct tttccccggg atggaaacaa aggcggtggt gatgagagga gtccgtcctt
002041 accatgttct tcttctaggg ttttgggggt aaaggcttta gctcactgtg caagcaaaca
002101 gtgcgtagcc gaggagtctc actgccgtat gtcagtggag caaggacaca catgttgtgt
002161 gttttactga tccctctgca caaacatctc acatagagag agagagagag agagagagag
002221 atgtacatgt tcagagatgc atcccccatc tgtcacgcaa ggccagaaca atattcttgt
002281 catctttcac tccccctgga gaaacgaagt ggctacctgt tgtcctagaa tctctcttct
002341 cttggttatg tgaggtggtg ttgttgctgt ggtcttccag attgttgtgt ggatacacag
002401 tgcctgcctg tgttcttgtg gtgttcttct tttagtcttt gctaaatttt aaaatgtaga
002461 catcaggtgg ttccagatag gccttctcta atgacctgtc acgagagcat agtaagtagc
002521 agtaccagca cacagttgac actctcactg tgcagggttt ttcgctcatc aggagctgta
002581 tccatgcatg cacaggtgct gctactacta tgccacacaa tcacttcatt attggagcat
002641 gtagtagggt agaagctgcc atctcatgtg tgttgcatgc acagaagcag gatatcaata
002701 gtgaattcag atgcatatgt gtagaaattg attaaaaccc tgaacaagtt tgttgaaata
002761 ggaaacctga acaggtagtg aggtcagtct tgtgtagaaa tccaatggtc agatagatgt
002821 attcctacac actctactat atacgtagta ggtagacaga tgagtaaatg ggatagtata
002881 ctatacagta ggtcagtctt gtgtagaaat ccaatgtaca gcagtatact ccatgacttg
002941 gtattctgtg ttttctgacc agtgaagtcg catggacaga acggtcagag ctagcctcga
003001 gaaagataca gttaagcaag agcatagcct attatttgat gtgagatctc cttgcaatat
003061 tttgggtgat ctccttggct atactagtag taccagtatt atatactcca ctatagagta
003121 ctactcgtgt attttttgcc agtcttcttc tagttctctt cattctctct catagatgta
003181 atggcggtca agaaacattg gatgctttcc aaggctagtc cgagttcaaa tgcgtctgta
003241 tttttcagct gtcaactcat ttcttctcag gttcaattgt tctttgtcct actacttgga
003301 cctaggtaga cgcacatcta ctctatatgc gttctctttt ccaaaaaata tgactggctt
003361 acctgattca cgaggcaacc tgaatatcac ccggtcaagg ttgcaggtga tcattcctaa
003421 ttgtgtttag gaccatagct tgattttaat cacaaaacaa cactgcattt ttctgactga
003481 tgttgcacct gatgtactcc aagattcttc gttgcatgca ttctttcaag gccatgcaaa
003541 agcaggggac acagatatca cgagtttccg tttgtctcga ggcaacacca aaagagatac
003601 tgaaactttg cttgctaaaa agcaaacaaa agaaaacaat gggatggaaa agagctgact
003661 gattttgcaa tggaacgtac gtcactagaa aagacaatgc atgcaactgg aggacagtag
003721 tatgactcga caaattgagt taacaaaaat tttttggatg ataattgttc ccctcatgtc
003781 tttttgtgat tgccaaatcg atagtgttgg ttcttccatt tctaaattcc ggagtttctg
003841 tgtctggcat tcctttttct tgatgtgtca gacatcttct gtacatttag tctgaggttc
003901 tgctgggtaa tgaaggtcct cttcgtttgc ttctgctctt aattttatta gctgtagttt
003961 ttggttaatg caagttaaaa caaaaatatc tctttaatta acttagttct tcaaaattga
004021 gtcttaaaaa tcctacaaat attgcaactt gcatgatgca ttccatcaat attttgtttg
004081 catgcgagtg cagctcctag aacactctct tgcttttctt tttccttttt taatgtaaag
004141 ctgctatatt caataatata tattttcatc tatttagtga acacaaagga actatttagg
004201 cagtgattcg gctacctctc ccagttgatt gttctgtttt ttccttggca ttattttcgc
004261 atagatacta atgtttctta tttatttatg aaaaattaag ttgcgcatta tttttataca
004321 tgattcatgt tatattgacc aaataaagtc ttatagaagt gcaatatttt gtgctacaca
004381 atacaagatg tgctgtggta gaatttaccc atgactcata ttgtcatttt tgaaaatttt
004441 cccgtgggtt acatgaaata attgtcttgc tcctgtgaat atttggatgt gtctgacctt
004501 tttatagatg ttttacaggg agtccgacca agaatgcctg agtcaaaatt agcttctgta
004561 ttatctttcc ctgtttttct tcattttgca gagtaaacca atgttctctg ctccttacat
004621 aagcagtaat tcttcacaag ttgggaacaa atgtggggaa aatcgtctaa cccttcattt
004681 attgatcctt gtttcccccc taatgtggcc ttatgtttta gaacttcatg caagtaaccg
004741 atatgcatga ttacatgaat atgctagcac catcatccat gagttgcaat tgatcataac
004801 taaatatata ttaaatattt aaaacatgaa ttttttaaat aaatgataaa taattgtgct
004861 gaaatgttga acatacacaa gtatgctact agtatattgt tttaaagcaa atcgttacaa
004921 aaaaaagaca cacatacctc caaatttacg gctgcaaaag ttccagtgta aggatgggtg
004981 tagaacctgg cttcgccctg cacttctttt aaagagcaag atgagatgat gaagcaatgc
005041 cgcaagttca aaagctgttt gacaagtaca aataattctt ctttatattc tgtagaaatg
005101 cacaaataca aaattatgga tgttgtacca ggcctttgta tcctacattt aactagaaac
005161 acatcttttc ttagatagga gaggttttgt ggctttgaaa aatactcgta gggtagagaa
005221 tttaacatac aggtggcaat tgaacaacca ttgtgtccaa agcgaagtta tcttcttctc
005281 atttctagga tatcagctga ttttcagtag tcttgtatgt acgaattaat ctagcgtagt
005341 agaggagaga atacccggtt cacccaagct acaaaaacaa ttaaaaagtt gtgaattttc
005401 acagcaaaat tgataccata gaatcagact ccacaaaatt tcaaatgaac agactactta
005461 tataagatat taaccattaa gataaacagt ttactggtga gatattgact tgctacacat
005521 aaaaagaaaa aaaaactagc accacagatt atccaatgca ccaatttagc caatttatgg
005581 catcagtaac tacgtgcata cactctaaat aaacgacctt ttacagtatt tagcgctaca
005641 tttagcattg ttctttgcat gtagtaaata aattaaaagt actaaattat tttcctgaca
005701 actctactga aactgttttg agtgcaatca atctatatat tttgccttgg aataaaattt
005761 aataggcctg tcgacctaga tatcgctagg acctgtatta tccttgcata attagttgat
005821 atttactcca caggaagaaa aaaatgttat tccttactaa agctaagtaa acttgtcgta
005881 gaactatcgt agtactcatc acactcttat cccaatcagg actgtttaca tcagagaaac
005941 tatctcatct ttgcactaaa agagcgcaaa gggttaacta cactttgaca gttgtaatta
006001 tttaatccaa gacattattt aagagattta tatactgcat ttcttgtacc taatatgcct
006061 gataattcac taaaacagaa ttagtcctct tatggttatt tgtagggttc atttctcatg
006121 cagtgctctg ttatccttga acatggttat tattttgttt aattaatttt ataccccctc
006181 tgttttaaat tagttgttgt tctaggtttg tcctaagtca aacattttta tctttgacca
006241 tcaatttttt ttttagaaat tcttgtagtt taagagcatg cgaattatat atgttgagaa
006301 aatattttct tatggtgaat ccgaaaacat aattctaatg atgttaaacc atatgaattt
006361 ctagaaaata atagtcaaaa gataaaaatg tttgacttag gacaacaaag ctagaaaaag
006421 tgatttgaaa tggagggagt aattcttttc agatgctact cctttggtca taaatatttg
006481 atgtttagga caagatttgg tctaaacttt taaaattccg acaatgaatt ttatattgga
006541 ataacttaat caaatctaat acatttatgg tattataact ttacttttgg aggtaaatct
006601 acaaaaagca tttcttttgt tttgaatata agcatttgag aaattgttga tggttgaaat
006661 ttcaagagtt tgaagaaatc ttgcgcttgc aaatggtttt gatcagagga agtaattgaa
006721 tggttctttt tctgaaaaaa aaaattctaa cgatgaaaga taagcatatt caactggtca
006781 tagtcttacc attttatttc gttgtgtcag aatgttttta agatctagct attgaatact
006841 ccctttgtcc ctaaatataa gggattttgg ttggatgtga cgcacatcca accaaaatcc
006901 cttatattta gggacggagg gagtagataa tggctagaca aggatgtgtt gagaatattg
006961 tgtgcttgct ttgtacgctg ttttacaaac actaacttat tatggatggg ttttcttaac
007021 actactcctg tacaataagt ttttttttct tttttcccct cgagagaatg aggaaagata
007081 cttaccattt atgtgaggaa aagtttacaa gttactatca cctgacattt tacaccagcg
007141 gataaattct attataagag tctccttaaa atgggacacc ttcttcttct ttatataaaa
007201 tgtaggcaac ggcatgactg ttcaaaaaaa aaacttctat tctaagagca agtactgtgt
007261 tgccagtatc ttcattttcg tagaccatca tctgattttg ttaagcacag tgttcttatg
007321 tatattttct gctgcaactt aaattctctc gtttgaattc atagcaaaat aggttgcctg
007381 ttttgtcgat ttcgataggt acagcgccag ctacatatat tgtaaagcta atatgtagtt
007441 tacatgttat tctcgtccac ccttgtaatc aaatatttat cgtttatctg actgcattct
007501 ttggtctact taatttaatt tgaataacta ctgaagagat ctacacgttt ttcctgattt
007561 cttttgaatt agtctaccta tgtgaaccat aatcaatttc ttgtctttgc taactatttc
007621 gtgtgacatg tttgaaggct cttctgagga ggaccaagaa ggtagcggag gagagacaga
007681 gctacctgag attgatgcac atggtgtgga tcaggagctc aagcaccatt tgctgaagaa
007741 gtacagtgga tacctgagct ccctgaagca agaactgtca aagaagaaga aaaaagggaa
007801 gctccccaag gatgctcgtc aacagctcct caactggtgg gagctgcact acaaatggcc
007861 ttacccctcg gtaagattca tcatcttctt aattttccat attgatctta tgatctatat
007921 gactagggat gctgaacatt aaatataagt tacttctagt tttggtacag gcgtacagca
007981 cagccaacac ctgtgatgtt tgcactgtag attcaggtca gatactcaga tgtaggcgca
008041 tatagttagt tggtgcatca tccatccctt tgaaatctat cgttatgtaa ttactgaagc
008101 taaagtaaac catcctgaga atcggaacat atgttgcatg acatacgcat gtttggtgta
008161 ttcaaatatt tgtagattct atgctatata tatatttgca agctatgacc acctatttgg
008221 aatgattttt gaaaatttct atagctagat tggaagtcag tcatggtagg cttctggtca
008281 accaagccat tagttcttgg acatgatttt tattaattat ttgtttttgg tgcgctgtag
008341 tcattagcat caaggtttgc atcgaaacta gcaggatatt ccttcaaaaa aaaactagaa
008401 ggataagtaa ctctgtattt tacccaggct atatatatca aacttttgct cttgtatttt
008461 cttatcattt tccccctaaa accgtcctaa ttttgtagag gcatcgaacg caccaaacag
008521 tactctttct gtttatctag catttctgtg ctattttttt ttcttttttg ctgggatgac
008581 cgaagaaagg tcatctaaat gttattaaaa tagaaggaaa aaatggttac aagaaagttt
008641 ttcattgaca gactatgaca ttattatgca atgccaacaa actattgcaa gctatatcac
008701 catgcagctt ttctattact cccaccgttc caaaatacga gaatctaggt acgaataggg
008761 cacgttctgg tttacgaatc tggataagtc gtagtaatac gatgtgtttc atccttgtcc
008821 taagttctta tattgacgga ggtagtgcta gttatctact accatttctg tgctataaaa
008881 tataatgcaa gctatcgcca tgcagatttc ctgatcatgg ttatgtatct attttacatg
008941 tggagcagga gagtcagaag gtggcactgg cggagtcgac ggggctggac ctgaagcaga
009001 tcaacaactg gttcatcaac cagaggaagc ggcactggaa gccctccgac gagatgcagt
009061 tcgtgatgat ggacggctac cacccgacca acgccgccgc cttctacatg gacggccact
009121 tcatcaacga cggcggcctc tacaggctcg gctagctagc tagcctactc cttatcccca
009181 gctaccatga cctagatcga tctcgacccc aaatcaatgg tcgctaagct actgaaaagt
009241 ttgtgatgag aattgaagaa cctaggttag tcttcctggt aatttgatgc tcgcgcgtac
009301 gcacgccatg gatggctgcg tgcttatttt gtttcttgcc gcaatatgta atgcaattgc
009361 cttagctaat gcatcaactc gggtcggttt tagctgctgc tgctgcgcca caatgaggtg
009421 gttgtggtta tgcttttgtg tggtttaata cgccaagacg tacacattgc ttcgaaatgt
009481 cgctactctt gctgctgcta attaagtgcg tgtttgaat
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。