更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK107296 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os03g0771500 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 3 |
| RAP - Location, Length | 32863250 - 32868773 ( + ) ; 5524(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 32863250 - 32863704 ( + ) ; 455 (bp) |
| Exon 2 | Location | 32863838 - 32863975 ( + ) ; 138 (bp) |
| Exon 3 | Location | 32864102 - 32864210 ( + ) ; 109 (bp) |
| Exon 4 | Location | 32867967 - 32868163 ( + ) ; 197 (bp) |
| Exon 5 | Location | 32868266 - 32868773 ( + ) ; 508 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os03g0771500 | Os03t0771500-01 | 110147 | 002126C04 | 16899 | LOC_Os03g56110.1 | AK107296 | 28702 | Q10ED2 | KNOS8_ORYSJ |
| Os03g0771500 | Os03t0771500-01 | 110147 | 002126C04 | 16899 | LOC_Os03g56110.2 | AK107296 | 28702 | Q10ED2 | KNOS8_ORYSJ |
Chromosome: 3 , position: 32,863,250 - 32,868,773 bp |
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| Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 ctcttcacat tccctgcatc catccatctc aaccaccacc acctcatttc aggagatcat 000061 ctcctccttt tctttgctag ggtttgtttg ccataactac tatctatcgc ctcttcttca 000121 cctcacctgt cctgtcggcc atggagagct tcgccagtct cgcaggaggt ggcagcagca 000181 gcaccacagc tcggttgccg gagctgatct cgccggagaa cccggaccac atctcgccgc 000241 ccccgttgct gtaccagctg ctcgccggcc cggagtcgtc ggcgcggcag catgggcatg 000301 atgggcatca ccacggcggc ggtggcggcg aagcagcagc agcagctgtg cagggacagg 000361 tctcgccggc aggcgcggag gcggcggtca aggccgagat catgtcgcat ccacagtact 000421 cggctctcct agccgcctac ttaggctgca aaaaggtgta gtagctaagc tagcagatgc 000481 atatatttaa acccatgcag atacagacga caacacgcca tgtgctgacc aagctcacgg 000541 ccgtgccgga tgtactgacc aagttgattt tgttggtttt tttatcaggt cggggcgccg 000601 ccggatgtac tgaccaagct cacggctgtg ccggcggcgc agcagctgga cgaagccgac 000661 ggccaccctc gtcgccggca cgagccacag cgtgatgacg acccggatca gctcgatcag 000721 ttcatggtat caacatatat agatcatcaa ctcctttgct cgcatgcgtg catatatata 000781 gacagacaca cacacatata tatccactgt tcttctgatc gatcgacatg ggatctgatc 000841 ttgtcatcac aggacgcgta ctgcagcatg ctgacgaggt acagggagga gctggagcgg 000901 ccgatcctgg aagccgcgga gttcttcagc agggtggaga cgcagctcga ttcgctcgct 000961 ggtgagtatt ttatacgcct cttctctaca aagatttgca gcttgccata ttgggaaatg 001021 ccgaaatggt atctcacttt atggaattgg agttagtttt ttttttgtca cctctttgga 001081 ctcatgtggc tgttgcagca gtatttctta aggctgctaa tctcaggctt taatatgttt 001141 attagggtgg gggataaggg ttgcatgcat tagatcagtt tcgtaataat tggagcttaa 001201 ttaagtatac atgaccagta tgataagcat catgaggtca cacggtgagg ctgcgagctg 001261 agctccaggg tttccaaatt gccatatatg catggctctc ctactttcca gtctccactt 001321 cctcctgtgc aatacaacga tggtgtcctc cctctgtcgt acaatcttaa tgaatcatac 001381 aaaggaataa ttaatactgg agcacatgca gttctttgaa cttgtacctt gtactgacgt 001441 tatttttttt cctctgattt tcttttattt ttagaattaa gacccaacct tgctgacatt 001501 attagcttct aattaaagag ttcagtgcat gcatcacaag tgatgaactg acaggagaaa 001561 gctctcagca cgttctgtcc ccaatatctc tgcaggtcct tgtctaacct acatttttgc 001621 tctcttgtca tgtcttccgc tggtagtcac agagaaatgg ctagacgatc tttgttttca 001681 acttagacga tttatgttaa gattaagggc caagaggtaa attaaacgaa ccatcaaagt 001741 ttgcagaaca tagtggccaa attgaggtgt aagtaacatc tagctggttg aaaacatgag 001801 tggcggtgga tgacagaatg agtggccggt gggcctattg tcattgtgcc tccgtgagtg 001861 taattggttt accgacctca aatcctggat cgagtcttgg ctgtcggaca tgaatgggca 001921 ctgttagtac cctgtgcact ttgtctcatg gcctggatat atagttactg gagtggggta 001981 aggatccagc tatatattag acaattgata agtgtgtatg accatctagt tgtgtccttt 002041 caagtgcagt tgtttccgaa cattattgag cactttccgt agccatacga atagatttcc 002101 agatcagaac tctttcttat atatacagac atcaatcgag tgccaaataa ttgaaagaat 002161 gaaagcagca tagtgaccag catgcatatc atattgtgtt ttgttgaaac atagttcaat 002221 aattttgtct atatgaacta gtgtagtttt ttacactggt aattgcatat atacaaggtg 002281 gtgtttcata agacgactaa tatggcaaaa ttatgaaatt cactatccgt acaaatcctg 002341 gataatatat aggagtacat atatggaaga attatctggt ttcttatata tttagtctgc 002401 caaaatgtca ttcagctatt cccctaccga tgaggcattt ttttttgtgt ctacacatat 002461 attcctgtct acagatggtc tcttttggaa ttgatttttg tttctaattt gttggacaga 002521 tggtctcttt tggaattgat tttttttcta atttgttgga tatttattgg actggtgcaa 002581 caattcatcc cctcacacat gatttgatct attccatata ctcagatgaa ttgttggaat 002641 cctactattt caccagtatg gatcatgttc agatattagc tattgacttt tagatatgac 002701 gtttgaaata taaattattt tttgtgactt gtttattatt aaaggtacat caaacataac 002761 ttataatttt acatatttgc actatttttt tttgtaaggt gaatggacaa acgtcatgtt 002821 caaaagtcag caatgtcata tatttaaaaa aggagggagg attgcattag gagttcataa 002881 gagtgataaa cacggcttgt taataagtga atgattatct aacttaacat atatatcatc 002941 cacaacaatg aaaatacagt ctatgcacac attactttaa ccagtgtctt gtactagcat 003001 caatactaac tagactttgc actcttttga tgtcatttcg tctcaatgtt gtcatttcag 003061 aaatatccat ttaactgttc ataagtaaca cttttcattc tgttaattac tttttgaatc 003121 atattctggt tgcatgctgc tctactgtct ggaaatattc caatgtcaac agaatgtgta 003181 tgtgcacaca tgcagcataa atagctccca gaaagtttca aataaatttt tatattggat 003241 ggaatttgaa ctgcatacta taaatattat cctatgaatt gtaggagttg tgtaatatat 003301 ttgttattta tatttttttt aatcttctga aatcaagggt atgaataatt tttttagtgg 003361 aactagtgta gtctttgtaa gtatttggcc ttatttcatt gttaaaatca atagttttgt 003421 ctatatgaat tagtgtagtt ttttacacta gtagttgcat atatacaagg tggtgtttca 003481 aaagacgact aatatggcaa aatttatgag attcactatc cgtacaaatc ctggatctat 003541 atattacaat cgctttgaga tgaatgcaaa ttaggatggg cacaattttt tcatagcatg 003601 gtggaatggt ttctcttgtc accatcgttt tgaactcatc tttattatgt gcccgctaat 003661 tactccctcc tttctaaatt gattatcatg taatagaaat caaaatttct taaattgatc 003721 atcatataac tgcatggaga cggatttcat cggaatacaa ttaatacaac atgggagaat 003781 gcgtgcatgc tagggtggag taattggcat ggagttttaa tcgatgtatg cattgtggga 003841 gaatgtgtgc attgtgtctt gattgatgtg atttaaatta ttttttggtc ttggtgcgta 003901 aatttatatg atgatcaatt tgagaaggag acagtatatt ttaaaaccgt tctgtctaag 003961 tgttcacaca agatcactga tttttttttt tgccttcgaa taaacagaac acaagcaggc 004021 cttgtaatat ttagtatata ttcttgtcat agcttttccc tacgaatcaa aatgaatatc 004081 cttgtctcaa attgaacggt atggcggctg tttgactagt ctagttttct gcttggaatt 004141 tggaaatacc gtggcctgtt tggtggagct ttagattctg ataatcagct gtttggtagc 004201 aagcttctga aaatctggaa atgctctgaa acccagcttc tccagcttct ggcttcttag 004261 ttcaattttc agaatctgta actacagatt ctcagaagct gtggactgtt tgggacagct 004321 tctagcagaa gtagcttttg ggaaaagttg cagctggaag aagctcctcc aaacagggcc 004381 tgtctagctg agcaaggaca attattgggt gcacagagtg tacaacatgt tcaggccttc 004441 agggttgcac tgttgcttac ttcgatacac tcctacctag taaacacaaa gaattaattg 004501 actgactggt ggcctggtgg ggctgaccga ttgagtaata cacagtacta ccattatact 004561 ctatgcataa tctattcgat ctcccacacc tcccttcata tgaggtttac ctgctgtgac 004621 gcacgcagtc atgtaatttt taattatttt gatagaacat catgttgaac aattaacctt 004681 tttgagctgc tgtttttaac agagagtaat tgtgaaggca cgggatcatc agaggaagag 004741 caagacccta gtgacaagca gctgaagcac cagcttctga ggaagtacgg tggctcgttg 004801 ggcgatctcc ggcaggtgtt ctccaagagg accaagaaag ggaagcttcc caaggaggcc 004861 aggcagaagc ttctgcactg gtgggagctg cactacaagt ggccctatcc ctccgtacgc 004921 acgcatcaca tcccgtttga tcaattcaac cacattttct gcaccaaatt aactcgtttg 004981 aaaatgcgtg aaatttacgg ggttgtgtat gagcaggaga tggagaagat gacgctggcg 005041 cagacgacgg ggctggacca gaagcagatc aacaactggt tcatcaacca gaggaagcgg 005101 cactggaagc cgacgccggt ggcaggcacg gccttcccga cgatggaagc tgccggaggc 005161 ggcttccgac actccggcca cggcggcggc cttgcggcgg cggcggcgct gccgctgtac 005221 atgggcaggc cgttcgttgt ggacggcatg taccggctcg ggtcttgaag cctctgggga 005281 tcgcatggtg tttgcatggt gttttttgct tggtaaatat ttgctagcag cttcccatga 005341 tcagcctgtg ggatggtgaa atggaagaac tgatgaatct tcatcacgat ctttcctctc 005401 attttttttt ctttggtgtg tgataaaagc tcagatgtac cacgtactac tgtctgcttc 005461 tttgcaaatg gatatgtaat tgaaagcttt aattctaaac atgggactcc tccgttttta 005521 tatt |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | |||
|---|---|---|---|
| Acc. No. | Clone Name | Length | |
| AK248600 | FLbaf126d22 | 1703 | view details |
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ305286 | whyd29j07 | 640 |
| more... (Total Hit Count: 5 ) | ||
