更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK067038 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os01g0182600 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 1 |
| RAP - Location, Length | 4328461 - 4337486 ( - ); 9026(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 4328461 - 4329030 ( - ); 570 (bp) |
| Exon 2 | Location | 4329123 - 4329215 ( - ); 93 (bp) |
| Exon 3 | Location | 4329333 - 4329551 ( - ); 219 (bp) |
| Exon 4 | Location | 4329752 - 4329820 ( - ); 69 (bp) |
| Exon 5 | Location | 4329925 - 4331421 ( - ); 1497 (bp) |
| Exon 6 | Location | 4332220 - 4332429 ( - ); 210 (bp) |
| Exon 7 | Location | 4332563 - 4332713 ( - ); 151 (bp) |
| Exon 8 | Location | 4332791 - 4333031 ( - ); 241 (bp) |
| Exon 9 | Location | 4333898 - 4333956 ( - ); 59 (bp) |
| Exon 10 | Location | 4334379 - 4334653 ( - ); 275 (bp) |
| Exon 11 | Location | 4334813 - 4334955 ( - ); 143 (bp) |
| Exon 12 | Location | 4335034 - 4335088 ( - ); 55 (bp) |
| Exon 13 | Location | 4335181 - 4335258 ( - ); 78 (bp) |
| Exon 14 | Location | 4335351 - 4335455 ( - ); 105 (bp) |
| Exon 15 | Location | 4335533 - 4335762 ( - ); 230 (bp) |
| Exon 16 | Location | 4337300 - 4337486 ( - ); 187 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.1 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.2 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.3 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.4 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.5 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.6 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
| Os01g0182600 | Os01t0182600-01 | 202522 | J013091I22 | 2363 | LOC_Os01g08700.8 | AK067038 | 5170 | Q9AWL7 | GIGAN_ORYSJ |
Chromosome: 1 , position: 4,328,461 - 4,337,486 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 ccaccatccc cggaaaaaat ctttttctcg cctctccttc ctccgagccg tttctctccc 000061 tctctctctc ctcctccttc ccctgcgcct cctccaccgc ccgtgtcgcc gccgcgcgcg 000121 tctatcccct cgccgccgcc gccgtctacg ccgcgtgagg tccggattgg ttgaaaggct 000181 gatcgaggta atgctttttt atttttcccg tgcggtttta gtttttctgt gctgtgcttg 000241 gtggtttttt ctttaaaact atttttaggc tggttttgat gatggccttt ctaaggttgt 000301 cgtgtatggg gggcgaggtg gttcgggtgg atttgtggtg ttatgttgag gggatttttg 000361 tttgggggga gagagttttg gtggtagatg cggttgggat tttgaagacg tgaaagggaa 000421 attagttttg aaatttgacg gcgaggttga gctgattagt attgtaataa ttcgtggcat 000481 cggatagatc aacgcgagat ggatgcttat tactgcgaat ttcaggaggt ttttgtggtt 000541 tttttaggcg agtagcgttg attctagctg gattttgctg cttcgtggag gcgtttagat 000601 gtggtgcata cggctgtgga tgtaatttgt gcggggataa ttactgaaaa ttaattcgca 000661 gtaagctagc tctgctttaa tattttttcc cctgaaacag taacaaggga tcccttcctc 000721 atttcgttaa cagtggaagt gaatacagac accaaccgat gagcagagac acctgtaatt 000781 aaacaccaaa agaagaacct gttttgttcc tatatatttt ccatttctat gctttaggta 000841 atatactttc tggttcggtg tcatagtacc cgaaatagaa tctttgcttg ccaaaaaaag 000901 aaagaataac aagatagaac aacatcatta aattctgtct tagacaatac atttataatc 000961 gaccaacaaa aacagaccga tgagtgacgt ggaataacaa atgaagtata aatgtcacga 001021 aaaacacatc tattgatttt gtgtgataag ccataggagc ctacgaggaa ccaagtgaat 001081 ggttctgtac accacatcca ttagcattac cataaatttg cctatttcta tgatgccttc 001141 cttaacatat ttatcgacat gtgagcttgc accataacta aatgttatgg taaactttac 001201 cttataaatg attgcaacat gtaccttttc atttcgataa ttaaaaacga gaaagcttcc 001261 acctttttcc tagatatatt ttttcgtttg attatgaatt tagttgtact tgacaataaa 001321 ataatgcgct tgtaagatta tgcaattttc gttgcattac ctccctctct tttcatttgt 001381 cagttttttt ctactccctc cgtttcatat tttaagtcgt ttgacttttt tcctagtcag 001441 actttgttaa gtttgacaaa gtttatagta aaatttagca atatctaaaa tattaaattg 001501 gtttcatcaa atctaacatt gaatatattt tgataatatg ttttttttgt gttgaaaata 001561 cttctatatt tttctataaa cttagtcaaa cttggaagaa atttcagtaa gaaaaaagtc 001621 aaacggctta taatatgaaa cggagggagt aaattttttt ttgcattaat taaaattcat 001681 gtattttcct ccttttttgg tttttgttgt gcgatatatt acagtgtaga gactctgaag 001741 ctcatatggt tggcattggt tgatatgata acgtgtcacg ttgtgagatg cagacccccg 001801 ttatgggggt tgattgaatg aagtggatag cactcttata actttcttgc tcgaagtttc 001861 ttgataccaa ggcaagtagc ttataagaag atttggactt tggtggcata aatggatgaa 001921 ctaactggcg gcttcaacgt ggtgttgatt acaggtgctt ttattgctaa ctggagcagt 001981 ttgtgtagtt tctttctttc tctttgagaa ttctctcagt ttcttgggca ggctcttgag 002041 ctaccaagta tgtcagcttc aaatgagaag tggattgatg ggctccagtt ctcatcactg 002101 ttctggcccc caccacagga ttcacaacaa aaacaggtaa cattattcct atttgattct 002161 tgttagaaat tctatatgtt gaacatactt gcctcaatgg gaaacttggt tgcgtctcct 002221 ctctgaaggc acaaattctg gcctatgttg agtactttgg ccagtttaca gctgacagtg 002281 agcaattccc tgaagatata gctcaggtac tgtatctcta agcatgttta gtatcttctg 002341 tgataaaatc tttctccagt gtgttaactt ttgcattctt tttcttgcat gcttgcagct 002401 aattcaaagt tgctatccat caaaagaaaa gcgccttgta gatgaagtat taggtaattt 002461 gatccagtga tcaatacatg ttccacaaac aattgaagaa agagtttgac atatttttct 002521 catatttcca gcaacttttg ttcttcatca tcctgagcat ggccatgcag ttgtgcatcc 002581 gattctgtca cgcatcatag atgggacact cagttatgat agaaatggtt tcccgttcat 002641 gtccttcatc tctttattta gccatacttc tgaggtaagg cccctactct aatggttagt 002701 tccaatttat tggttcattt ctctgtgttt gataagattt tgcctctgct gtgcatttca 002761 atattatatc taaactgtgc tgcttatagc ttatcaaact actcttgctc ataaagatgc 002821 aacttttatg cagaaagagt actcggagca gtgggccttg gcctgtggag aaattcttag 002881 agttctaact cactacaaca ggccaatctt caaagttgat caccaacata gtgaagcgga 002941 atgtagcagc acatctgatc aggcctcatc atgtgagtct atggagaaaa gggctaacgg 003001 ttctccaaga aatgaacctg accggaagcc attgaggcca ctatctcctt ggatcacaga 003061 catattgctt gctgcacctc tgggtattag aagtgactat tttagatggt gagtcataat 003121 aaatgataac atattattgt tctgtggact gaaaatctga aatcctcctt tcttgagaaa 003181 tacaacctca attttatggt gatattgaca agaaggaaga gcgcatataa tttaaagtta 003241 aaacacggaa aataatagaa gtatgtgagc agaacgcagg agcaaggggt ggaactcata 003301 acaagttcaa acttcatgca tgttcataat tccccaatgc aagtatggca agaaaaatag 003361 acaactttta aaagtatgct aatggaactg catgcattgt gtaaacttgc ttttgtcaag 003421 catgttggaa catactatat atttgctgct gatgatgaaa aatttgcttg agtactcttc 003481 tattgctaat ggacgcttac cattccctgt tttgtcttca aatgcatcag gtgtggtgga 003541 gtcatgggaa aatacgcagc tggtggagaa ttgaagcctc caacaactgg ttggtaaaat 003601 cagcaatgga attttctatc gtgaattttt tataattatt gtaacattaa ttactcccat 003661 gtctttttat tctgttgaga taccatgtga caatgtctac aattgcatat tttgcattct 003721 ttggtagatc agttcccttc ttaagatccc caaagggaaa ctggagtatc aataacttac 003781 tccctcaaat aaaaaaaaag tgatacttta ggcataaaca cattcttcaa aacaaaactt 003841 tgaatagcag tttcttttgt aatatattaa taaagcatgg aaaaattata atgtgaagaa 003901 tgtacattca gggacaaata tactcatcat ttttgcatgg ttgatcttaa tgtccataga 003961 gagattgatc agaccaaaag tttatttttg acaggagtga gtatggatta taataggagt 004021 gaatggcaat atgctgtgaa agtgagcatt ttatatttgt ttactactag catttggtga 004081 caaagcaaat gatgtatatt gtaaatcaaa gtaaacaagt agaacatgtc ctgtggcgac 004141 aagacataac ctacaaatta aagttagcct gattgtttat tttactggga gcacattttt 004201 tctagattct agagtacata ttattaaaaa aggtgtgata tgtttgcaaa ttacttttta 004261 atggaagttt gtaaattact ttgaaacttg cattcagttt ttttgcttct taaaaaacat 004321 agtgcatatg ggctttatga gctcatacta tgcatgtttt tctgcattgg agtgggacct 004381 ttatcttttt cttgcaactc ggatgctaat gcttattata aacacaagtt actaacatgt 004441 gcttgggtca ttcagcttac agccgaggat ctgggaagca cccacaactt atgccatcca 004501 cgcccagatg ggctgttgcc aatggagctg gagttatact aagtgtctgt gatgaggaag 004561 tagctcgtta tgagacagca aatttgactg cggcagctgt tcctgcactt ctattacctc 004621 caccgaccac accattggac gaacatttgg ttgcggggct ccctcctctt gaaccatatg 004681 ctcgcttgtt tcataggtaa gctcttatga tcctgtccac tgttgtacca tgtgtacttt 004741 ccaaatgatt gctaacatgc tatttttcgt cagatactat gcaattgcta ctccaagtgc 004801 tacccaaagg ttgctttttg gtcttctcga ggcaccacca tcatgggccc cagatgcact 004861 tgatgcagca gtacagcttg ttgaactcct tagagcagcg gaagattacg attctggcat 004921 gcgggtatat catacatctc tctggctgtt gtttcagtgc tatcaatcaa gatgacacat 004981 catgcaatat tatcataaca gcacattatg tgttttgaat attttattga ttgtcatagc 005041 tttgttttat gttttagctt ccaaagaact ggatgcatct tcatttcctg cgtgctattg 005101 gaactgcaat gtcaatgaga gctggtatcg ctgctgatac gtctgctgct ttacttttcc 005161 gaatactctc ccaaccgaca ttactttttc ctccactgag acatgccgaa ggagttgaac 005221 tccatcatga gccactaggt ggctatgtat catcgtacaa aaggcaggta tgcagtgttt 005281 cctgcaccta cttgctacct attctgtatt tgatgtattc aatttccttt ttatcagttt 005341 tctcgaaata tatgctaata ggcttgtcac taaacggcta cattatccag actctgttct 005401 gaattttttt ttcattaagt actgttagct gccagattac atcatcatga ctaaagtagt 005461 ttagctacaa tattgcaaag ctagatttgt ctagcctcta ttgttttgaa tagaaaaggc 005521 aggtatgcag tgtttcctgc acctacttgc tacctattct gtatttgatg tattcaattt 005581 cctttttatc agttttctcg aaatatatgc taataggctt gtcactaaac ggctacatta 005641 tccagactct gttctgaatt tttttttcat taagtactgt tagctgccag attacatcat 005701 catgactaaa gtagtttagc tacaatattg caaagctaga tttgtctagc ctctattgtt 005761 ttgaatagaa aattaaatct tttggtcatt tttttgtaac cttttaggag tctctgtatg 005821 cttgtcgtca acatgctatg ataagtttat atcagttctt ttggagctat gatgtattct 005881 tgtatatttt atgactgcta ggatattatg ttaaaactgt tttaaaggta tcatcaaaca 005941 agttaatata gatattgcta cctaccaaag ttggaatttg attatgtcgt aaaatatatg 006001 caccctacat gttttagctt catattgact tatattttca tatgtgctcc ttcaactgca 006061 caaagctgga agttcctgca tctgaagcca ctattgatgc cactgcgcaa ggcattgctt 006121 ccatgctatg tgctcatggt cccgatgttg agtggagaat atgtaccatc tgggaggctg 006181 cgtatggttt gctacctctg agttcatcag cagttgattt gcctgaaatt gttgtagctg 006241 ctccacttca gccacctact ttgtcatgga gcctatactt gccattgttg aaagtatttg 006301 agtatttacc tcgtgggagt ccatctgaag catgccttat gagaattttt gtggcaacag 006361 ttgaagctat actgagaaga acttttccat cagaaacctc tgaacaatcc aggaaaccaa 006421 gaagtcaatc taagaacctt gctgttgctg aactccgaac aatgatacat tcactctttg 006481 tggagtcctg tgcttcaatg gaccttgcgt ccagattact atttgtagta ttaactgttt 006541 gcgtcagtca tcaagctttg cctgggggaa gtaaaaggcc aactggtagt gataatcatt 006601 cctctgagga ggtcacaaat gattcgagat taaccaatgg aagaaacaga tgtaagaaga 006661 gacaaggacc agttgctaca ttcgactcat acgttctagc agccgtttgt gccttatctt 006721 gtgagctcca gctgttccct tttatttcca agaatgggaa ccattcaaat ctgaaggact 006781 ccataaagat agtcatacct ggaaaaacca ctggtatcag taacgagcta cacaatagca 006841 ttagctcagc gattcttcat actcgtagaa tacttggcat cttggaagct ctgttctcct 006901 tgaagccatc atctgttggt acttcatgga gttatagttc aaatgagatt gttgcagcag 006961 ctatggttgc tgctcatgtt tctgagttat ttcgtcgatc caggccatgc ttaaatgcac 007021 tgtctgcgct gaagcaatgc aagtgggatg ctgagatttc taccagggca tcatcccttt 007081 accatttgat tgacttgcat ggtaaaacag tgacctccat tgtgaacaaa gctgagcctc 007141 tagaagctca cctgaccctt acaccagtaa aaaaggatga acctcccatt gaggaaaaga 007201 acattaactc atcagatggt ggtgcattgg aaaaaaagga tgcttcaaga tcacacagga 007261 aaaatggttt tgcaagacca ctcttgaaat gtgcagaaga tgttatacta aatggtgatg 007321 tcgcaagtac ttctgggaaa gccattgcaa gtttacaggt ggaagcttct gatttggcaa 007381 acttcctcac catggaccga aatgggggtt acagaggttc tcaaactctc ctaagatctg 007441 tactgtcaga gaagcaggag ctatgcttct ctgttgtctc attgctctgg cagaagctca 007501 ttgcatctcc cgaaatgcag atgtctgcag aaagtacatc agctcatcag ggttggagaa 007561 aggtatggtc attcctgctt ataagatacc agaataatgc tatgaagacc gtccttggtt 007621 gtcagcattc ttatacacaa tgataatctt tgtttttcat gggtaggttg tggatgcgct 007681 ttgtgacatt gtttcagcct caccgaccaa ggcttcagct gctatcgttc tgcaggtcaa 007741 gatattgtta ttgttatatt tacatacttg ttatcatatt taaaagcttc atattgtatg 007801 tacctttgaa aaaaaaagtt ccatactgta gcttcttttg ttctcatttc ttggtttcaa 007861 agcatcagca tcattaccga tataaaatat acccatttcc tcagtcatct tccccgactc 007921 ttgtatcttt cacaggccga gaaggacttg cagccctgga ttgctcgaga tgatgagcaa 007981 ggtcagaaga tgtggagagt caaccagcga atagttaagc tgatagcaga gcttatgagg 008041 aaccacgata gcccagaagc attggtgatc cttgctagtg cttcagatct tcttcttcga 008101 gcaactgatg gaatgcttgt tgatggtgaa gcttgtactt taccacaatt agaggtaaca 008161 ccttcattca tgaggtcctt aggtgcaaat cccagtgaag aataatcagt tctactttgt 008221 atggttcatc tcgcttactg accggttcat ctcgggatca attacgagca gctattggaa 008281 gtaaccgcca gagcagtcca tctcatcgtc gaatggggag attcaggtgt atccgtcgct 008341 gatggcctct ccaatctgct gaaggcatgt cctcttctct gatctcactc acgttcatgc 008401 caaacttact catcatcatc catgatccat catcctgact gaatcttgat atgcagtgcc 008461 gtctatcaac caccatccgc tgtctttcgc accccagcgc gcatgtccgt gcactcagca 008521 tgtccgtcct tcgcgacatc ttgaacagcg gacaaataaa ctccagtaag ctcatccaag 008581 gggaacaccg gaatggcatc cagagcccaa cctaccagtg cttggcagca agcatcatca 008641 actggcaagc cgatgtggag agatgcatag agtgggaagc ccacagccgc cgcgccaccg 008701 ggctgacgct cgccttcctc accgcggcgg cgaaggagct cggctgccca ctcacttgct 008761 gacaaggcca caccatgact gtcactgcaa gcagctgctg taggatcagc gagtaggaaa 008821 ggatgacttg ccggccagtt tcctgagatg tgatttaaga ctgatattag ctgatgttcc 008881 caagcatgat acggggcttg ctcccaagat gtgattttta ctttactttt ggttaatgtg 008941 ctaccgctga cattagatgt tcaagcatat gaaaactgct tgtgctgtaa cttgtatgtc 009001 tgtaacgtaa aaatctttcc atatgg |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ482382 | bah38p17 | 638 |
| more... (Total Hit Count: 20 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ628338 | whcs15b19 | 871 |
| more... (Total Hit Count: 39 ) | ||
