cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK100027
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0170900
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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3796805 -
3803130
( - );
6326(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
3796805 -
3797223
( - );
419 (bp)
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Exon 2
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Location |
3797340 -
3797383
( - );
44 (bp)
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Exon 3
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Location |
3797467 -
3797530
( - );
64 (bp)
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Exon 4
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Location |
3797633 -
3797866
( - );
234 (bp)
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Exon 5
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Location |
3797976 -
3798119
( - );
144 (bp)
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Exon 6
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Location |
3798238 -
3798432
( - );
195 (bp)
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Exon 7
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Location |
3798658 -
3798733
( - );
76 (bp)
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Exon 8
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Location |
3798900 -
3798999
( - );
100 (bp)
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Exon 9
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Location |
3799166 -
3799199
( - );
34 (bp)
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Exon 10
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Location |
3799287 -
3799371
( - );
85 (bp)
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Exon 11
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Location |
3799437 -
3799501
( - );
65 (bp)
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Exon 12
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Location |
3799591 -
3799689
( - );
99 (bp)
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Exon 13
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Location |
3800021 -
3800086
( - );
66 (bp)
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Exon 14
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Location |
3802696 -
3803130
( - );
435 (bp)
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Chromosome: 3
, position: 3,796,805
- 3,803,130
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aaacacaaac ccaccacctc ctcctcctcc tcccatccag cacgcgcctc ctctctcgcg
000061 cggctttcca tttccatctc cccctcctcc tcctacgtct ccgccgctcc tcacttcctc
000121 cactcgattt cctttcttgg cctctcctcc tctgacacag gggtgtgcag gtttgtgttt
000181 gtgcgtggcg cgtccgccat ggctcgcggc agcggggccg gaggaggcgg cggcggtggt
000241 ggcggggggc tggagctgtc ggtcggggtc ggcggcggcg gcggcgcgcg tggtggggga
000301 ggcggtgagg cggcggcggc ggtggagacg gcggcgccga tcagcctcgg gaggctcatc
000361 ctctccggga tggtcgccgg cggcgtgcag tacgggtggg cgctccagct ctccctcctc
000421 accccctacg tccaggtata tatatatata tactgtactc ctgtgtattt tgcacactct
000481 catgcatgca tctgaaactc tgaataatcc tgcaaaaaat atatacaagt atctcacgtg
000541 tggatttgat tttgttcgcg agtttttgct cgtgctagct gttctaatct gcaaggtttc
000601 atggtagtag attatatatg tcctggttac aatcttttca aggttataat cttgtaattt
000661 ttttctgctt tgtcaatatt tacttcgcac tgtctggtgt gagtcgttaa aaaaatatat
000721 atcttgaaag attggggaat ttttcttcat gtgtggggag agatttattt ttttttgttt
000781 gaacggtaga tttgactagt gtctaaaagt accgtaataa attcaatctg catgcctttt
000841 gtaatttttt ttgctcatgt gtttatatac atgtggccaa atatgcattt gatgcactag
000901 ctatcatttt tgtcattttg tagttattcc ttttcctttc cttttttttt cctttttctt
000961 tttgttgtca ctagaggatt catatcctct cgattcctct atgaaacgtc ggcgttttct
001021 gcctcttttc tgaagaatct gtatacctat ataagaatca aaatctttta taagttcttt
001081 ttgtgcactt tggatcaatc aggctagcca gcatgacact tagcatcagt accggtctac
001141 tgtaccgaga ttcactttac gcttgacacg tttctcaact ccttgtttga ttccatttta
001201 cctcaattag actgtttgat tccgttttat ctcagatatg acactccttt ttttaaaatt
001261 ccattttacc tcagatgctg tacagtgcca taaaaaaata tacatctgct ccaactcacc
001321 ttatccttct tgtaataacc acgtattagg ttaatagcta ctaatagcta gagatgtaaa
001381 caaaaataag cagacaaggg caaaagtgag cggtaataat ggagaattaa tctgtcgttc
001441 ctccgcgcgc agttaaaggt aggcagatga cgggtccctc ccctctattc catactaacc
001501 gcaagatgaa actaatattc ttactgctag atatataaat catccttcat ttagcttcat
001561 ctccctcctt aagatgtgtt cttttcttcc atttcctaac ttctactccc ttcgtttgac
001621 gtacacatat ttcctaaact gccaaacgat gtgtttctac taaaaattta tatggtttaa
001681 aaaacatatt aatatatttt tttttgtctt tttagctaat atttaattaa ttatgtgcta
001741 aactaccgct caattttgtg taccgggaga aagggttctc aatcattaca aaagaacaca
001801 gcctagtctc catgaaaaac atcactttta ttttaagaca gagcaagtgg agcgatttta
001861 taactttact atagtacaaa attaatggtc agaaatttaa aattttgacc gaattttatc
001921 gtaagcatca aatatttatt accggagaga tagagtattg gttatttgcc tctctgtcgt
001981 caaatattct aaacaaagac gatcttctta gtggttaaac ttaaatctca gtccttccag
002041 gcgtttattt gaaggattta tagcggagat aaacagctcc ttttttttcg gaaatacgta
002101 aggagggcac ttttgtatta aggggaataa aaagggtctg tacagggaaa accaaaaaac
002161 agcaggggac aggaataaac agctcctcac ttcctctttg tatcagtcca tactaattaa
002221 caaagtgttc caaaatgttc tgtacttttt ctgtagaaca ttatatgcag ttcatcaccc
002281 ctgatggtcc atgcatcagg tctagctacc tactgttgta ttgaagtatt tctggcgaag
002341 tttatcctta ccttagcctt ctcgagccaa gtgccataaa gatggttgct gtagaggcaa
002401 ctccaaccca ctttaaccgc gcacatgaaa aataaagggg taaaacaagg aaattctagg
002461 tcagatatat atgtcctgtg gactgtggca cagttgcaac agagcaattg cataggcaaa
002521 tgagggcaga tcatcatgta cccatagcct gttggtgcta tgttagcatc caagcattgc
002581 cattttaact attaagattc ttcttcttat atttgacaag tgaaataaat ttagtgactg
002641 aacatatata gaacgatgaa cagtctttgt atgtttattc atgccatggg ggaaagagaa
002701 gtgtgatctg aagttattgg atagatagct gttagttgta gcatgcaagg caatgcatcc
002761 tggaaccaac agaccaacag agctggggat atttcatctg ctaaatttct gggaaaattt
002821 attgtgtggt aatcaatatg tgttcactct ttgcaactgg tacacgctct ctgatgtttc
002881 tgaatatctt ccacagtgat gcagatcttg ttgacacagc aaactcaaca aacatagtca
002941 tttttttaag gaatgaagca tgatcatcta ttgtcagagt agattacagt caaagttttt
003001 ttataagcca aaacaactga ttttctaacc tctgttattt acagacactc ggactgtcgc
003061 atgctcttac ttcattcatg tggctctgtg gtcctattgc tggcatggtg gtaagtaaca
003121 ataccaaatt atctgctcta tcgatatata cgagacaaag cttttgccct cttttaaaaa
003181 aaataaatca aattaattca tgttatggaa tctgtacttt ctgcaatgta aattcaagtt
003241 actttagtgt cttcactaca acaaaaactt gggtatcctg aactcctgta tctatcagag
003301 tttgaagctg cattttctgt agcttctgat atgtgtaatg tagatcatac tgtcataatt
003361 cataagcttt cataaaaaat gtttgtgtac aagtcatatt ttttttaatt cttgatccat
003421 tatcatctcc caatcctgca ggttcaacca tgcgtgggtc tatacagtga taggtgcacc
003481 tcaaaatggg gaagacgaag gccatatatt cttacaggat gtgtgttgat atgcttggct
003541 gtaagaacca ctgaaccttg gaactcttat tccttaagtt gaagtcccca aattttctct
003601 catattgaca ttgcacttta tgtatgtagg tcgtagttat tggattttca gctgacattg
003661 gatacgccat gggtgataca aaggaagact gcaggtaact gaacattttg cgtatcataa
003721 ttagcagata acagttatct gatacaccat gtaatgcagt gtctaccatg gatcacggtg
003781 gcatgctgct attgtatatg tcctgggatt ctggcttctt gatttttcca acaacactgt
003841 gcaggttagt gcctactata taataatcat gttaaagaaa tttgtacaaa gaatcataac
003901 aaaaatctta attttgcaat gcaatttcta gggtccagca cgtgctctaa tggctgattt
003961 atcaggtaat ttttcatagc cttgtctttc agagttaact accaaatttt tattggtttc
004021 cacagttcac taacacttga ttgattccag aaaaaaaaaa gttgcccttg tgttctgggc
004081 ttctggtatc agtgggattt tggatttgat ctcctaattt tcgttctgta ggacgtcatg
004141 gacctggcac agctaactcc atcttctgtt cttggatggc aatgggaaac atcctaggat
004201 actcctctgg ttccacaaac aattggcaca agtaagttac tcttatgtat cagtttcata
004261 cagattttct gtttagcaca gtctattcag ttgcattctt ttctgaaaga aggcaagtga
004321 aattcatatt acattagtag agaaggtgaa atttgtttac aagtattgag ttgcattctc
004381 cctaattaat tgcgcaggtg gtttccattc cttaaaacaa gagcttgctg tgaagcttgt
004441 gcaaatttga aaggtgcatt tctggtggct gtggtaagtt ctgttattac ctcataaact
004501 gcctgctgat aatactttaa caatgtgcta atattagtct ttgtaataag atagtactat
004561 actgaaaata ttttagcgag tatgagtaat ttaacttaca tattgtattg ctgttcctct
004621 tttttcaacc ctgtcatatt ggttgctttt tttcacagcc taacatgctc ttgtttggtc
004681 attttcccct gttttcagat tttcctgtcc ctgtgcttgg ttataactct gatatttgcc
004741 aaggaagttc cattcaaagg aaatgcagcc ctcccaacaa aatcaaacga gccagctgag
004801 cctgaaggca ctggtccact agcagtgttg aaaggcttca ggaacttacc tactgggatg
004861 ccttctgtgc ttattgtgac tggccttacc tgggtatgca atatacatca gaaaaagaac
004921 ttttcagatt attgaaaaaa ttgctactag atcatatctt agttatatct tatagtacct
004981 taccttttct atgatatgat tgtccttgta gttgtcttgg ttcccattca tcctctacga
005041 cactgactgg atgggccgtg agatctacca cggtgaccca aagggaactg atcctcagat
005101 cgaggctttc aaccagggtg tcagggcagg tgcatttggc ctgctactga attcggtaag
005161 atctgattgg tttctgaatt ctgattgcca caactactgt caaatcttta acactcaagc
005221 catgttcttt ggcagcaact aaccatgggc ttctgatcgt gcagattgtg ctaggattca
005281 gctcattctt gattgaacca atgtgccgga aagtcgggcc aagggtggtg tgggtgacga
005341 gcaatttcct cgtctgcatc gccatggctg caactgcact gatcagcttc tggtcactca
005401 aggacttcca tggaactgtt cagaaagcca tcactgcaga caagagcatc aaggctgtct
005461 gcctcgtcct ctttgcgttt cttggagtcc ctctcgccgt aagaatcact gacacttcaa
005521 cttaaacaca ttgctaaaaa aaattatttc ctcaagaatg ccttatcctg atgaactgtc
005581 tgaaaatttg cgcgatgcag gttctgtaca gtgttccctt cgcagtgacg gcgcaattag
005641 cggccactag agggggtggc caaggtatga atcccaacat tcttgcagct tttcttgaca
005701 taattcggtg ttgtttggat gctggtctaa tccatggcga tctgcagggc tctgcaccgg
005761 cgtcctcaac atctccatcg tcatccctca ggttaattag ctgccaaatt ctaatccgtt
005821 tcccttgaaa ccgaatcaga tatacttcat ggattattag aatttgaatg ctcatggatt
005881 catggttgcg tggtgttctt ccctcaggtg gtcatcgcgc tgggagccgg gccgtgggac
005941 gagctgttcg ggaaggggaa catcccggcg ttcggcctcg cctcgggatt cgcgctcatc
006001 ggcggcgtcg ccggaatatt cctgctgccc aagatctcca agcgccagtt ccggtcggtc
006061 agcatgggcg gcggtcactg accgccccgc tctcgccgcc ggctgcggcg gcggcggcgg
006121 ccggagcagc gccgccggaa gtggtgagct ttgtagttct cgtttgcaat ggatcaaagg
006181 agccccctct ttttttttac atagggtaat taattaatta aggctgttaa ttaggaaggg
006241 gtgaggtggc cctgcagctg gggcccacgc tttgttgcca cctcggtaga agagaataag
006301 cagatcatgc agataatatg gaactg
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
