cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK068861     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0820300 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 35322729 -  35323579  ( + ) ;   851(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35322729 -  35323579 ( + ) ;   851 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os03g0820300 Os03t0820300-01 J013170H07 204525 J013170H07 4091 LOC_Os03g60560.1 AK068861 40191 AP008209.2 255674134 BAF13632.1 113550189 NC_008396.2 297602023 NM_001058253.1 115456234 NP_001051718.1 115456235


Chromosome: 3 ,  position: 35,322,729 - 35,323,579 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 atccatcgat ctccccccaa ccaaaaatct ctctctcaat ccatcgatcc attaattcac 
000061 aagcttatcg aatcggagat gaagcacccg aggcaggagg aggaggtgtc gctggcgctg 
000121 gcgctgagca cggactgctc gtcgacggcg tcggactcgt cggcggcggc ggcgggcggc 
000181 gcggcgagga ggaagagggc gcggcggagg agcgtggtgg cgacgtcggg ggaaggggag 
000241 ttcgtgtgca agacttgcag ccgcgcgttc ccgaccttcc aggcgctcgg gggccaccgg 
000301 accagccacc tccgcggccg gagcaacggg ctcgacctcg gcgccatcgg cgacaaggcg 
000361 atcaggctgc acagggcggc cgacaaggag cacagggaca agcacgagtg ccacatctgc 
000421 ggcctcggct tcgagatggg ccaggcgctc ggcggacaca tgcggcgcca ccgcgaggag 
000481 atggccgccg ccggcggtgg atcctccgcc gacgactggg tctggcgctg cgacgcgcgg 
000541 ccggagggga tcgccgccga gccaccggtg ttgctggagt tgttcgccta gttaccgctg 
000601 gtctccatta gtttcgtcca agttttgaac tgacgcagtg tgtgtcacca ttaattagtt 
000661 catgtacatg tctagaaaaa aaaagtcagg ttcatcgatc ttgtaactat gataggggtt 
000721 taattttttt tttcattagc gtttgggttg ttcggttttg aatcggtcag tttttgaacc 
000781 gtttggtgga gatttgttga gttcagatgt atatacacac acagatgtaa tataattctt 
000841 tcattcatag c

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
AK253045 FLbaf58a18 824
more... (Total Hit Count: 2 )
/rice/oryzabase