cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK067690     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0815100 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 35064649 -  35066070  ( + ) ;   1422(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35064649 -  35065201 ( + ) ;   553 (bp)
Exon 2 Location 35065331 -  35066070 ( + ) ;   740 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os03g0815100 Os03t0815100-01 203234 J013120D02 2982 LOC_Os03g60080.1 AK067690 795 AP008209.2 255674134 BAF13596.1 113550153 NC_008396.2 297602023 NM_001058217.1 115456162 NP_001051682.1 115456163


Chromosome: 3 ,  position: 35,064,649 - 35,066,070 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 attcgagaaa tccctcacaa cccacaacat tttcaaacaa cgcaaagcag tagcagcagc 
000061 gagaagcaag caagaagcga tggggatggg gatgaggagg gagagggacg cggaggcgga 
000121 gctgaacctg ccgccggggt tcaggttcca ccccacggac gacgagctgg tggagcacta 
000181 cctgtgcagg aaggcggcgg ggcagcgcct gccggtgccg atcatcgccg aggtggatct 
000241 ctacaagttc gacccgtggg atctgcccga gcgcgcgctg ttcggcgcca gggagtggta 
000301 cttcttcacc ccgcgggatc gcaagtatcc taatgggtca cgccccaacc gcgccgccgg 
000361 caacgggtac tggaaggcca ccggcgccga caagcccgtc gcgccgcggg ggcgcacgct 
000421 tgggatcaag aaggcgctcg tgttctacgc cggcaaggcg ccgcgagggg tcaagactga 
000481 ttggatcatg catgagtacc ggctcgccga tgctggccgc gccgccgcgg gcgccaagaa 
000541 gggatctctc agggtaagct tagctcagat tcatccgaat tactagcaat gatccttgct 
000601 tcgatcgaag attattcggt gggagtgatg atcgataatt ggatcgtggt ctgatctgat 
000661 ctggtgtgaa ttgtttgtgc agttggatga ttgggtgctg tgtcggctgt acaacaagaa 
000721 gaacgagtgg gagaagatgc agcaggggaa ggaggtgaag gaggaggcgt ccgacatggt 
000781 tacgtcgcag tcgcactcgc acacccactc gtggggcgag acgcgcacgc cggagtcgga 
000841 gatcgtggac aacgacccct tcccggagct ggactcgttc ccggcgttcc agcctgcgcc 
000901 gccgccggcg acggcgatga tggtgcccaa gaaagaatcg atggacgacg ccaccgcggc 
000961 cgccgccgcc gccgccacca tccccaggaa caacagcagc ctgttcgtgg acctgagcta 
001021 cgacgatatc cagggcatgt acagcggcct cgacatgctg ccgccgggcg acgacttcta 
001081 ctcgtcgctc ttcgcgtcgc cgcgggtgaa ggggacgacg ccacgcgccg gcgccggcat 
001141 gggcatggtc ccgttctgag gtgacggcga cgcgatcgaa caggtggtga tcgatgctgc 
001201 aacgtgtgta aatatacagc gccggctggg tcaagagatg gctcgggtga cgcgcgcgcg 
001261 gcgtgtcctg gcgttggcgc cggggcattc tttagttttt catcttttca tcatctcaga 
001321 tggtagatac aaaacagtgt atgtatgtag ctctgtttct ctctatagaa ccccaacaaa 
001381 ttttgttgtt gatgttgttt atcttcatat gctttgatct tg

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
AK249102 FLbaf19c03 1516
more... (Total Hit Count: 12 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ875915 whthls1o06 751
more... (Total Hit Count: 16 )
/rice/oryzabase