cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information | |
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RAP - Accession No. | AK066844 Link to RAP-DB ( IRGSP 1.0 ) |
RAP ID | Os03g0161900 ( IRGSP 1.0 ) |
RAP - Chromosome No. | 3 |
RAP - Location, Length | 3341275 - 3343545 ( + ) ; 2271(bp) |
Exon (Data source : RAP-DB) | ||
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Exon 1 | Location | 3341275 - 3343545 ( + ) ; 2271 (bp) |
Related Rice IDs | |||||||||
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RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
Os03g0161900 | Os03t0161900-01 | 202301 | J013088J01 | 2160 | LOC_Os03g06630.1 | AK066844 | 26677 | Q8H7Y6 | HFA2D_ORYSJ |
Os03g0161900 | Os03t0161900-01 | 202301 | J013088J01 | 2160 | LOC_Os03g06630.2 | AK066844 | 26677 | Q8H7Y6 | HFA2D_ORYSJ |
Chromosome: 3 , position: 3,341,275 - 3,343,545 bp |
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Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 gctgccaagc tcgccggatt cttttcttgg attggagcag attggggggt gacgatggag 000061 aagatgatgc cggggatggt gaaggaggag tggccgccga gctcgccgga ggagggggag 000121 gcgccgaggc ccatggaggg gctgcacgag gtcgggccgc cgccgttcct gaccaagacg 000181 ttcgacctgg tggccgaccc ggccaccgac ggcgtcgtct cgtggggccg cgcgggcagc 000241 agcttcgtcg tctgggaccc ccacgtcttc gccgccgtct tcctcccacg cttcttcaag 000301 cacaacaatt tctccagctt cgtccgccag ctcaacacct acgtgagtcc ccccaatttc 000361 cattgccacc actagtgttg ttccctgctt gtcttcagtt gttgggaaat tgtgtgttct 000421 gttttcttgt tttggatgtt gttgttcagt tcttggtccg gacgaattac ctgaacaagc 000481 gatcacattt ctacagtttg agatttcagg ttggattgtt agataattaa aatgggtgtg 000541 ttctcacttt tgtggttgcc attatgtttt gtgccacatc gtgtgtgttg agtattgata 000601 ggaatcttga cactagaatt aaatggatgg agcattgtaa aattttcagt gcaaattgta 000661 aacccggcgg tattggttaa ataaatcggt tgtattgtgc atttttccac tcagtgcaag 000721 aactttgtgc atgcacaaat gcacaattat gtagcaatgg agctagaaac tgggatttac 000781 ttattggtgc tgacctgttg gttgtagaaa attacgatgg ctacaattgt tcaacggact 000841 gttttgtgga cttgacatta tttgcccaaa ctcagctatg tccaatcctt ttcagacaca 000901 tgcatataaa ccctcaattc ctgaaatgtt ctcaatgatt cagaaagagg aaaaaaatct 000961 ccatggacga actactcagt ttctgacatg ctgttttctt caatttgtta ctgtgtagct 001021 agatggatca agacagcgga tgaagctaca agaatctgct tgtttgttct agaagactcc 001081 tttgatcacc atcaaaaaaa agaaaaagtg atgtagtata ctgctacctg ttctcttaat 001141 aatgctatga taaattttgt cgcaaaacta tgtgaaacca accgttttac atactttgtg 001201 tgacttgcta tcctaattga gttttgtctg tggcttctgt acttgaacta actatacctg 001261 taatattctt tgtgtttgca atttgcaggg tttcagaaag attgatcctg acagatggga 001321 attcgcgaat gatggtttcc tgagaggcca gaggcatctt ctaaagatga ttaagaggag 001381 gagaccattg tcttatctcc ctggatctca gcaggcactt ggcacctgcc ttgaggttgg 001441 tcagttcgga ttagatgaag agatcgacag gctaaagcgt gacaagaaca tcttactcgc 001501 ggaggttgtg aaactaaggc acaagcagca aagcacgaaa gccaatatgc gagccatgga 001561 agagaggctg caacatgcgg agcagaagca ggtccagatg atgggtttct tggcaagagc 001621 aatgcagaac cctgacttct ttcaccagtt gattcaccag caggataaaa tgaaggggct 001681 cgaggacaca ttctcgaaga agaggacgag gtcgatagac atagtgccat ttctcaaccc 001741 cggggaggtc agccagggcg atcaactcga gtcgacattg ctgtttgatc caaggccatt 001801 tgctgaactg aatgatgagc ctgcaaagtc tgaactggag aatttagcac tgaacatcca 001861 gggtcttggg aagggcaagc aggatgtcaa caggactcga aatcagccac gaaatcaggc 001921 tagcaacgaa accgagttaa ccgacgactt ctgggaggag cttctgaatg aaggagcaag 001981 agatgatgct gggattccag ggatggagcg aagaagacct agatatgtcg atgcattagc 002041 gcagaagctg ggttatctaa gcaatagtag ccaaaagtag atcaagtggc tccgatttgt 002101 ccaaccattt ttgtgatagc tcttattgta tatcggtgta attgtattat agtgatagtt 002161 ttatagcgat aggtccaatt tatattgcgg atccggcgtg ctgtgtagta tatgtctggt 002221 gatgtaaagt tgagccatca ttcttaatgg tatatattga caattttttg c |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
Hit Barley ESTs | ||
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Acc. No. | Clone Name | Length |
AV833112 | bags11o22 | 569 |
more... (Total Hit Count: 4 ) |
Hit Wheat ESTs | ||
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Acc. No. | Clone Name | Length |
CJ662666 | whkp13j22 | 464 |
more... (Total Hit Count: 2 ) |