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NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID GFP-IR-2 
 Symbol Avic:GFPEGFP  Full Name Green Fluorescent Protein 
 CG No   Old CG No  
 Synonyms GFP, T:GFP 
 Accession No (Link to NCBI) NM_00GFP 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Shimada N, Inami S, Sato S, Kitamoto T, Sakai T.
Modulation of light-driven arousal by LIM-homeodomain transcription factor Apterous in large PDF-positive lateral neurons of the Drosophila brain.
Sci Rep (2016) 6 37255 [ PubMed ID = 27853240 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgATGGTGAGCAAGGGCGAGGAG 
 Primer Seq. 3'
aatctagaggtaccCTTGAAGTTCACCTTGATGCC 
 Predicted Fragment Size
501 
 IR fragment full Seq
0001 ATGGTNANCA AGGGCGAGGA GCTGTTCACC GGGGTGGTGC CCATCCTGGT CGAGCTGGAC 
0061 GGCGACGTAA ACGGCCACAA GTTCAGCGTG TCCGGCGAGG GCGAGGGCNG ATGCCACCTA 
0121 CGGCAAGCTG ACCCTGAAGT TCATCTGCAC CACCGGCAAG CTGCCCGTGC CCTGGCCCAC 
0181 CCTCGTGACC ACCCTGACCT ACGGCGTGCA GTGCTNTCAG CCGCTACCCC GACCACATGA 
0241 AGCAGCACGA CTTCTTCAAG TCCGCCATAC CCGAAGGCTA CGTCCAGGAG CGCACCATCT 
0301 TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG GGCGACACCC 
0361 TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC ATCCTGGGGC 
0421 ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC AAGCAGAAGA 
0481 ACGGCATCAA GGTGAACTTC AAG 
 in silico PCR Fragment
0001 ATGGTGAGCA AGGGCGAGGA GCTGTTCACC GGGGTGGTGC CCATCCTGGT CGAGCTGGAC 
0061 GGCGACGTAA ACGGCCACAA GTTCAGCGTG TCCGGCGAGG GCGAGGGC-G ATGCCACCTA 
0121 CGGCAAGCTG ACCCTGAAGT TCATCTGCAC CACCGGCAAG CTGCCCGTGC CCTGGCCCAC 
0181 CCTCGTGACC ACCCTGACCT ACGGCGTGCA GTGCT-TCAG CCGCTACCCC GACCACATGA 
0241 AGCAGCACGA CTTCTTCAAG TCCGCCATGC CCGAAGGCTA CGTCCAGGAG CGCACCATCT 
0301 TCTTCAAGGA CGACGGCAAC TACAAGACCC GCGCCGAGGT GAAGTTCGAG GGCGACACCC 
0361 TGGTGAACCG CATCGAGCTG AAGGGCATCG ACTTCAAGGA GGACGGCAAC ATCCTGGGGC 
0421 ACAAGCTGGA GTACAACTAC AACAGCCACA ACGTCTATAT CATGGCCGAC AAGCAGAAGA 
0481 ACGGCATCAA GGTGAACTTC AAG 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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