| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
8542R-1 |
| Symbol |
Hsc70-5 |
Full Name |
Heat shock protein cognate 5 |
| CG No |
CG8542 |
Old CG No |
CG8542 |
| Synonyms |
Hsc70, HSC-70, HSC70, Hsc5, l(2)k04907, hsc70, dhsc70, HSC5, CG8542, Hsc70-5 |
| Accession No (Link to NCBI) |
|
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Liaw GJ, Chiang CS.<br> Inactive Tlk associating with Tak1 increases p38 MAPK activity to prolong the G2 phase.<br> Sci Rep (2019) 9(1) 1885
[
PubMed ID = 30760733
]
[
RRC reference
]
Yano H, Yamamoto-Hino M, Awano W, Aoki-Kinoshita KF, Tsuda-Sakurai K, Okano H, Goto S.<br> Identification of proteasome components required for apical localization of Chaoptin using functional genomics.<br> J Neurogenet (2012) 26(1) 53-63
[
PubMed ID = 22417167
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgTCCGGAGCTTCTAGCATGTTC |
| Primer Seq. 3' |
aatctagaggtaccGCGTTCTTCACGGGAGTGTTC |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
|
| in silico PCR Fragment |
|
| Assemble Data |
<PRE>
8542R-1.IR full 1 TCCGGAGCTTCTAGCATGTTCCGCAATCTGCCAGGTGCTAGCAATGGAATATCGTCCCAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 1 TCCGGAGCTTCTAGCATGTTCCGCAATCTGCCAGGTGCTAGCAATGGAATATCGTCCCAG 60
8542R-1.IR full 61 CTGCGTTACAAGTCCGGTGAGGTCAAAGGTGCTGTTATTGGAATCGATCTGGGAACAACC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 61 CTGCGTTACAAGTCCGGTGAGGTCAAAGGTGCTGTTATTGGAATCGATCTGGGAACAACC 120
8542R-1.IR full 121 AACTCCTGCCTGGCCGTCATGGAGGGCAAGCAGGCCAAGGTGATTGAAAACGCCGAGGGA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 121 AACTCCTGCCTGGCCGTCATGGAGGGCAAGCAGGCCAAGGTGATTGAAAACGCCGAGGGA 180
8542R-1.IR full 181 GCCCGGACCACACCCTCCCACGTCGCCTTTACCAAGGACGGTGAGCGGCTGGTCGGCATG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 181 GCCCGGACCACACCCTCCCACGTCGCCTTTACCAAGGACGGTGAGCGGCTGGTCGGCATG 240
8542R-1.IR full 241 CCCGCCAAGCGCCAGGCAGTGACAAACTCGGCCAACACCTTCTATGCCACCAAGCGACTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 241 CCCGCCAAGCGCCAGGCAGTGACAAACTCGGCCAACACCTTCTATGCCACCAAGCGACTG 300
8542R-1.IR full 301 ATTGGCAGACGTTTTGATGATCCCGAGGTTAAGAAAGACATCACTAACCTGTCCTACAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 301 ATTGGCAGACGTTTTGATGATCCCGAGGTTAAGAAAGACATCACTAACCTGTCCTACAAG 360
8542R-1.IR full 361 GTGGTCAAGGCTTCAAATGGCGATGCCTGGGTCTCTTCCACCGACGGCAAGGTGTACTCT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 361 GTGGTCAAGGCTTCAAATGGCGATGCCTGGGTCTCTTCCACCGACGGCAAGGTGTACTCT 420
8542R-1.IR full 421 CCATCCCAAATCGGTGCTTTCATCCTGATGAAGATGAAGGAAACCGCTGAGGCATACCTG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8542R-1.in silico 421 CCATCCCAAATCGGTGCTTTCATCCTGATGAAGATGAAGGAAACCGCTGAGGCATACCTG 480
8542R-1.IR full 481 AACACTCCCGTGAAGAACG<span class="snp"><tt>N</tt></span> 500
|||||||||||||||||||<span class="snp"><tt> </tt></span>
8542R-1.in silico 481 AACACTCCCGTGAAGAACG<span class="snp"><tt>C</tt></span> 500
</PRE>
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
|
|
Pathways (updated: 2024/04/26)
|
| KEGG Pathway |
dme03018
:
RNA degradation
|
