| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
8331R-3 |
| Symbol |
CG8331 |
Full Name |
CG8331 |
| CG No |
CG8331 |
Old CG No |
CG8331 |
| Synonyms |
CT24597, CG8331 |
| Accession No (Link to NCBI) |
|
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
larval lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Yalçın B, Zhao L, Stofanko M, O'Sullivan NC, Kang ZH, Roost A, Thomas MR, Zaessinger S, Blard O, Patto AL, Sohail A, Baena V, Terasaki M, O'Kane CJ.<br> Modeling of axonal endoplasmic reticulum network by spastic paraplegia proteins.<br> Elife (2017) 6
[
PubMed ID = 28742022
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgATGGCCACTCAGGTGAAGCAG |
| Primer Seq. 3' |
aatctagaggtaccCCATCATCGATGATCCTGTCA |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
|
| in silico PCR Fragment |
|
| Assemble Data |
<PRE>
8331R-3.IR full 1 ATGGCCACTCAGGTGAAGCAGTTCTTAAACGGCTACAAGGATGACGTGAGCAAATCGCT<span class="snp"><tt>N</tt></span> 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||<span class="snp"><tt> </tt></span>
8331R-3.in silico 1 ATGGCCACTCAGGTGAAGCAGTTCTTAAACGGCTACAAGGATGACGTGAGCAAATCGCT<span class="snp"><tt>G</tt></span> 60
8331R-3.IR full N61 CGATGCTTCCAAGCCGTGGACCAAAGTCTTCGATACCGTGGAGGAGAAGACCGGCGTG 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico C61 CGATGCTTCCAAGCCGTGGACCAAAGTCTTCGATACCGTGGAGGAGAAGACCGGCGTG 118
8331R-3.IR full 121 GACCGGGTCAATATTTTCGTGGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 121 GACCGGGTCAATATTTTCGTGGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGC 178
8331R-3.IR full 181 TGGGGCGCCCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCATC 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 181 TGGGGCGCCCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCATC 238
8331R-3.IR full 241 CATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATCTACTGGGTCACG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 241 CATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATCTACTGGGTCACG 298
8331R-3.IR full 301 TTTGG<span class="snp"><tt>C</tt></span>ATCTTCACCGTGATTGAATTCTTTTCGAGTCTGCTAACTTCGGTGATTCCCTTT 358
|||||<span class="snp"><tt> </tt></span>||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 301 TTTGG<span class="snp"><tt>A</tt></span>ATCTTCACCGTGATTGAATTCTTTTCGAGTCTGCTAACTTCGGTGATTCCCTTT 358
8331R-3.IR full 361 TACTGGCTGCTGAAGTGTGCTTTCCTCATCTGGTGCATGCTGCCCACGGAACAGAATGGT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 361 TACTGGCTGCTGAAGTGTGCTTTCCTCATCTGGTGCATGCTGCCCACGGAACAGAATGGT 418
8331R-3.IR full 421 TCTACCATCATCTACAACAAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 421 TCTACCATCATCTACAACAAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTT 478
8331R-3.IR full 481 GACAGGATCATCGATGATG<span class="snp"><tt>N</tt></span> 498
|||||||||||||||||||<span class="snp"><tt> </tt></span>
8331R-3.in silico 481 GACAGGATCATCGATGATG<span class="snp"><tt>G</tt></span> 498
</PRE>
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
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Pathways (updated: 2024/04/26)
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| KEGG Pathway |
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