| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
8331R-3 |
| Symbol |
CG8331 |
Full Name |
CG8331 |
| CG No |
CG8331 |
Old CG No |
CG8331 |
| Synonyms |
CT24597, CG8331 |
| Accession No (Link to NCBI) |
|
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
larval lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Yalçın B, Zhao L, Stofanko M, O'Sullivan NC, Kang ZH, Roost A, Thomas MR, Zaessinger S, Blard O, Patto AL, Sohail A, Baena V, Terasaki M, O'Kane CJ.
Modeling of axonal endoplasmic reticulum network by spastic paraplegia proteins.
Elife (2017) 6
[
PubMed ID = 28742022
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgATGGCCACTCAGGTGAAGCAG |
| Primer Seq. 3' |
aatctagaggtaccCCATCATCGATGATCCTGTCA |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 ATGGCCACTC AGGTGAAGCA GTTCTTAAAC GGCTACAAGG ATGACGTGAG CAAATCGCTN
0061 NNCGATGCTT CCAAGCCGTG GACCAAAGTC TTCGATACCG TGGAGGAGAA GACCGGCGTG
0121 GACCGGGTCA ATATTTTCGT GGGTGCTGTT GGTCTGTGCG CCATCTACCT GATCTTTGGC
0181 TGGGGCGCCC AACTACTGTG CAACATCATT GGGGTTCTGT ACCCTGCATA TATTTCCATC
0241 CATGCCATCG AGTCCAGCAC AAAGCAGGAC GACACCAAGT GGCTGATCTA CTGGGTCACG
0301 TTTGGCATCT TCACCGTGAT TGAATTCTTT TCGAGTCTGC TAACTTCGGT GATTCCCTTT
0361 TACTGGCTGC TGAAGTGTGC TTTCCTCATC TGGTGCATGC TGCCCACGGA ACAGAATGGT
0421 TCTACCATCA TCTACAACAA GCTGGTGCGA CCCTACTTCC TGAAACATCA CGAATCCGTT
0481 GACAGGATCA TCGATGATGN |
| in silico PCR Fragment |
0001 ATGGCCACTC AGGTGAAGCA GTTCTTAAAC GGCTACAAGG ATGACGTGAG CAAATCGCTG
0061 CGCGATGCTT CCAAGCCGTG GACCAAAGTC TTCGATACCG TGGAGGAGAA GACCGGCGTG
0121 GACCGGGTCA ATATTTTCGT GGGTGCTGTT GGTCTGTGCG CCATCTACCT GATCTTTGGC
0181 TGGGGCGCCC AACTACTGTG CAACATCATT GGGGTTCTGT ACCCTGCATA TATTTCCATC
0241 CATGCCATCG AGTCCAGCAC AAAGCAGGAC GACACCAAGT GGCTGATCTA CTGGGTCACG
0301 TTTGGAATCT TCACCGTGAT TGAATTCTTT TCGAGTCTGC TAACTTCGGT GATTCCCTTT
0361 TACTGGCTGC TGAAGTGTGC TTTCCTCATC TGGTGCATGC TGCCCACGGA ACAGAATGGT
0421 TCTACCATCA TCTACAACAA GCTGGTGCGA CCCTACTTCC TGAAACATCA CGAATCCGTT
0481 GACAGGATCA TCGATGATGG |
| Assemble Data |
8331R-3.IR full 1 ATGGCCACTCAGGTGAAGCAGTTCTTAAACGGCTACAAGGATGACGTGAGCAAATCGCTN 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 1 ATGGCCACTCAGGTGAAGCAGTTCTTAAACGGCTACAAGGATGACGTGAGCAAATCGCTG 60
8331R-3.IR full N61 CGATGCTTCCAAGCCGTGGACCAAAGTCTTCGATACCGTGGAGGAGAAGACCGGCGTG 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico C61 CGATGCTTCCAAGCCGTGGACCAAAGTCTTCGATACCGTGGAGGAGAAGACCGGCGTG 118
8331R-3.IR full 121 GACCGGGTCAATATTTTCGTGGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 121 GACCGGGTCAATATTTTCGTGGGTGCTGTTGGTCTGTGCGCCATCTACCTGATCTTTGGC 178
8331R-3.IR full 181 TGGGGCGCCCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCATC 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 181 TGGGGCGCCCAACTACTGTGCAACATCATTGGGGTTCTGTACCCTGCATATATTTCCATC 238
8331R-3.IR full 241 CATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATCTACTGGGTCACG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 241 CATGCCATCGAGTCCAGCACAAAGCAGGACGACACCAAGTGGCTGATCTACTGGGTCACG 298
8331R-3.IR full 301 TTTGGCATCTTCACCGTGATTGAATTCTTTTCGAGTCTGCTAACTTCGGTGATTCCCTTT 358
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 301 TTTGGAATCTTCACCGTGATTGAATTCTTTTCGAGTCTGCTAACTTCGGTGATTCCCTTT 358
8331R-3.IR full 361 TACTGGCTGCTGAAGTGTGCTTTCCTCATCTGGTGCATGCTGCCCACGGAACAGAATGGT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 361 TACTGGCTGCTGAAGTGTGCTTTCCTCATCTGGTGCATGCTGCCCACGGAACAGAATGGT 418
8331R-3.IR full 421 TCTACCATCATCTACAACAAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8331R-3.in silico 421 TCTACCATCATCTACAACAAGCTGGTGCGACCCTACTTCCTGAAACATCACGAATCCGTT 478
8331R-3.IR full 481 GACAGGATCATCGATGATGN 498
|||||||||||||||||||
8331R-3.in silico 481 GACAGGATCATCGATGATGG 498
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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