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NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 7954R-1 
 Symbol stck  Full Name steamer duck 
 CG No CG7954  Old CG No CG7954 
 Synonyms PINCH, dPINCH, pinch, pin85A, D-PINCH, dpin, stk, CG7954, stck 
 Accession No (Link to NCBI) NM_079554.2 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Wang Y, Antunes M, Anderson AE, Kadrmas JL, Jacinto A, Galko MJ.
Integrin Adhesions Suppress Syncytium Formation in the Drosophila Larval Epidermis.
Curr. Biol. (2015) 25(17) 2215-27 [ PubMed ID = 26255846 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgGGTGCCATGCATTGTACGCGA 
 Primer Seq. 3'
aatctagaggtaccGCAGTGGAATCCAACTCTGTG 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 GGTGCCATGC ATTGTACGCG ATGTGCCGAC GGCTTCGAGC CGACTGAGAA GATTGTTAAC 
0061 TCCAATGGAG AACTCTGGCA CACCCAGTGC TTCGTATGTG CCCAGTGCTT CCGACCCTTC 
0121 CAGGATGGGA TATTCTACGA GTTCGAGGGC CGTAAGTACT GTGAACGCGA CTTTCACGTG 
0181 CTCTTCGCTC CCTGCTGCAA CAAGTGCGGC GAGTTCGTCA TCGGACGGGT CATCAAGGCC 
0241 ATGTCAGCTA GCTGGCATCC ACAGTGCTTC CGCTGCCAAT TGTGCGCCAA GGAGCTGGCT 
0301 GATTGCGGAT TCATCAAGAA CCAGAACCGC GCCTTGTGTC ACGAGTGCAA TGCCAAGGTG 
0361 AAGGCGGAGA TTACCGGCCG CTATGTATGC CAAAAATGCC ACGGCCTCAT CGACGAGGAG 
0421 CCTTTGCGAT TCCGGGGCGA AGTGTACCAC GGCTATCACT TCAGTTGCAC gGCCTGCGGC 
0481 ACAGAGTTGG ATTCCATCTG C 
 in silico PCR Fragment
0001 GGTGCCATGC ATTGTACGCG ATGTGCCGAC GGCTTCGAGC CGACTGAGAA GATTGTTAAC 
0061 TCCAATGGAG AACTCTGGCA CACCCAGTGC TTCGTATGTG CCCAGTGCTT CCGACCCTTC 
0121 CAGGATGGGA TATTCTACGA GTTCGAGGGC CGTAAGTACT GTGAACGCGA CTTTCACGTG 
0181 CTCTTCGCTC CCTGCTGCAA CAAGTGCGGC GAGTTCGTCA TCGGACGGGT CATCAAGGCC 
0241 ATGTCAGCTA GCTGGCATCC ACAGTGCTTC CGCTGCCAAT TGTGCGCCAA GGAGCTGGCT 
0301 GATTGCGGAT TCATCAAGAA CCAGAACCGC GCCTTGTGTC ACGAGTGCAA TGCCAAGGTG 
0361 AAGGCGGAGA TTACCGGCCG CTATGTATGC CAAAAATGCC ACGGCCTCAT CGACGAGGAG 
0421 CCTTTGCGAT TCCGGGGCGA AGTGTACCAC GGCTATCACT TCAGTTGCAC GGCCTGCGGC 
0481 ACAGAGTTGG ATTCCA-CTG C 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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