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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 4173R-1 
 Symbol 3-Sep  Full Name Septin-2 
 CG No CG4173  Old CG No CG4173 
 Synonyms sep2, CG4173, unnamed, Sep2 
 Accession No (Link to NCBI) NM_079693.2 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Perkins AD, Lee MJ, Tanentzapf G.
The systematic identification of cytoskeletal genes required for Drosophila melanogaster muscle maintenance.
Sci Data (2014) 1 140002 [ PubMed ID = 25977760 ] [ RRC reference ]

Fairchild MJ, Islam F, Tanentzapf G.
Identification of genetic networks that act in the somatic cells of the testis to mediate the developmental program of spermatogenesis.
PLoS Genet. (2017) 13(9) e1007026 [ PubMed ID = 28957323 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgTCAACGTCATGTGTATAGGCG 
 Primer Seq. 3'
aatctagaggtaccTCCATTGGCGTTTAGCTCCTG 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 TCAACGTCAT GTGTATAGGC GAAACCGGAC TGGGCAAGTC GACGCTGATG GACACGCTGT 
0061 TCAACACCAG CTTCGAGTCC ACGCCGAGTC CCCACACTTT GCCGAGCGTC AAGTTGAAGG 
0121 CACACACCTA CGAGCTGCAG GAGAGCAATG TGCGACTCAA GCTCACCATC TGCGACACGG 
0181 TTGGCTACGG CGATCAGATC AACAAGGACG ACTCGTTCAA GGCGGTGGTG GACTACATCG 
0241 ACGCACAGTT CGAGAACTAT CTGCAGGAGG AGCTGAAGAT CAAGCGATCG CTGGTGACAT 
0301 GCCACGACAG CCGCATCCAC ATCTGCCTCT ACTTTATTTG CCCCACTgGG CACGGCCTCA 
0361 AATCGCTGGA CCTGGTGTGC ATGAAGAAGC TGGACAGCAA GGTGAACATA ATTCCGGTGA 
0421 TTGCCAAGGC GGATACCATT TCCAAGGTTG AGCTACAGCG CTTTCAAGGC GAAGATCATT 
0481 CAGGAGCTAA ACGCCAATGG A 
 in silico PCR Fragment
0001 TCAACGTCAT GTGTATAGGC GAAACCGGAC TGGGCAAGTC GACGCTGATG GACACGCTGT 
0061 TCAACACCAG CTTCGAGTCC ACGCCGAGTC CCCACACTTT GCCGAGCGTC AAGTTGAAGG 
0121 CACACACCTA CGAGCTGCAG GAGAGCAATG TGCGACTCAA GCTCACCATC TGCGACACGG 
0181 TTGGCTACGG CGATCAGATC AACAAGGACG ACTCGTTCAA GGCGGTGGTG GACTACATCG 
0241 ACGCACAGTT CGAGAACTAT CTGCAGGAGG AGCTGAAGAT CAAGCGATCG CTGGTGACAT 
0301 GCCACGACAG CCGCATCCAC ATCTGCCTCT ACTTTATTTG CCCCACTGGG CACGGCCTCA 
0361 AATCGCTGGA CCTGGTGTGC ATGAAGAAGC TGGACAGCAA GGTGAACATA ATTCCGGTGA 
0421 TTGCCAAGGC GGATACCATT TCCAAGGTTG AGCTACAGCG C-TTCAAGGC GAAGATCATT 
0481 CAGGAGCTAA ACGCCAATGG A 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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