|
NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
discarded
|
Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
1599R-1 |
Symbol |
CG1599 |
Full Name |
CG1599 |
CG No |
CG1599 |
Old CG No |
CG1599 |
Synonyms |
CG1599 |
Accession No (Link to NCBI) |
|
Inserted Chr. |
ll |
Insertional Mutation |
|
Phenotype induced by Act5C-GAL4 at 28 degrees |
late pupal lethal |
Map Viewer |
|
Reference
[Please submit your publication]
|
Fujita N, Huang W, Lin TH, Groulx JF, Jean S, Nguyen J, Kuchitsu Y, Koyama-Honda I, Mizushima N, Fukuda M, Kiger AA. Genetic screen in Drosophila muscle identifies autophagy-mediated T-tubule remodeling and a Rab2 role in autophagy. Elife (2017) 6
[
PubMed ID = 28063257
]
[
RRC reference
]
Jean S, Cox S, Nassari S, Kiger AA. Starvation-induced MTMR13 and RAB21 activity regulates VAMP8 to promote autophagosome-lysosome fusion. EMBO Rep (2015) 16(3) 297-311
[
PubMed ID = 25648148
]
[
RRC reference
]
Takáts S, Nagy P, Varga Á, Pircs K, Kárpáti M, Varga K, Kovács AL, Hegedűs K, Juhász G. Autophagosomal Syntaxin17-dependent lysosomal degradation maintains neuronal function in Drosophila. J Cell Biol (2013) 201(4) 531-9
[
PubMed ID = 23671310
]
[
RRC reference
]
|
Comment |
|
Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCACCACAGTGCTGGCGAAGTT |
Primer Seq. 3' |
aatctagaggtaccAATTTCGGGAGGCCTTACGGA |
Predicted Fragment Size |
500 |
IR fragment full Seq |
|
in silico PCR Fragment |
|
Assemble Data |
1599R-1.IR full 1 CACCACAGTNCTGGCGAAGTTTGCGGAGTGCGTCG-CAACTTTGCNNA-GTGACGGAGNA 60
||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||| |
1599R-1.in silico 1 CACCACAGTGCTGGCGAAGTTTGCGGAGTGCGTCGGCAACTTTGCCGAAGTGACGGAGCA 60
1599R-1.IR full 61 CATAATCGGACGGATCGGGGTGCATAACCACAAGATGACCTACACACACGGAGACTACCT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 61 CATAATCGGACGGATCGGGGTGCATAACCACAAGATGACCTACACACACGGAGACTACCT 120
1599R-1.IR full 121 GATCCACTACACCTGCGAGAACAAACTGGTCTACATGTGCATCACCGACAACGAGTTCGA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 121 GATCCACTACACCTGCGAGAACAAACTGGTCTACATGTGCATCACCGACAACGAGTTCGA 180
1599R-1.IR full 181 ACGGTCGCGGGCCTTCCTCTTCTTGGCGGATATCAAGCAGAAGTTTATCCAGACTTACGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 181 ACGGTCGCGGGCCTTCCTCTTCTTGGCGGATATCAAGCAGAAGTTTATCCAGACTTACGG 240
1599R-1.IR full 241 CCTACAGGTGGCCACCGCCATCGCCTACTCCATGAACACCGAGTTCTCCAAGATCCTGGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 241 CCTACAGGTGGCCACCGCCATCGCCTACTCCATGAACACCGAGTTCTCCAAGATCCTGGC 300
1599R-1.IR full 301 CCAGCAGATGGTCTATTTCAGTCAGTCCCGGGAGGTGGACACCATTTCGCGAGTACATGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 301 CCAGCAGATGGTCTATTTCAGTCAGTCCCGGGAGGTGGACACCATTTCGCGAGTACATGG 360
1599R-1.IR full 361 TCAGATTGACGAGCTTAAAGACATTATGGTTAAGAATATTGACAGCTTGCGGGATCGCGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 361 TCAGATTGACGAGCTTAAAGACATTATGGTTAAGAATATTGACAGCTTGCGGGATCGCGG 420
1599R-1.IR full 421 CGAGAAACTAGAGCTGCTCGTCAACAAGACCGAAAACTTGAGCAATAATTCCGTTGCATT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1599R-1.in silico 421 CGAGAAACTAGAGCTGCTCGTCAACAAGACCGAAAACTTGAGCAATAATTCCGTTGCATT 480
1599R-1.IR full 481 CCGTAAGGCCTCCCGAAATT 500
||||||||||||||||||||
1599R-1.in silico 481 CCGTAAGGCCTCCCGAAATT 500
|
Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
|
|
|