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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
discarded
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
1599R-1 |
| Symbol |
CG1599 |
Full Name |
CG1599 |
| CG No |
CG1599 |
Old CG No |
CG1599 |
| Synonyms |
CG1599 |
| Accession No (Link to NCBI) |
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| Inserted Chr. |
ll |
| Insertional Mutation |
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| Phenotype induced by Act5C-GAL4 at 28 degrees |
late pupal lethal |
| Map Viewer |
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Reference
[Please submit your publication]
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Jean S, Cox S, Nassari S, Kiger AA.
Starvation-induced MTMR13 and RAB21 activity regulates VAMP8 to promote autophagosome-lysosome fusion.
EMBO Rep. (2015) 16(3) 297-311
[
PubMed ID = 25648148
]
[
RRC reference
]
Fujita N, Huang W, Lin TH, Groulx JF, Jean S, Nguyen J, Kuchitsu Y, Koyama-Honda I, Mizushima N, Fukuda M, Kiger AA.
Genetic screen in Drosophila muscle identifies autophagy-mediated T-tubule remodeling and a Rab2 role in autophagy.
Elife (2017) 6
[
PubMed ID = 28063257
]
[
RRC reference
]
Takáts S, Nagy P, Varga Á, Pircs K, Kárpáti M, Varga K, Kovács AL, Hegedűs K, Juhász G.
Autophagosomal Syntaxin17-dependent lysosomal degradation maintains neuronal function in Drosophila.
J. Cell Biol. (2013) 201(4) 531-9
[
PubMed ID = 23671310
]
[
RRC reference
]
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| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCACCACAGTGCTGGCGAAGTT |
| Primer Seq. 3' |
aatctagaggtaccAATTTCGGGAGGCCTTACGGA |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
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| in silico PCR Fragment |
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| Assemble Data |
1599R-1.IR full 1 CACCACAGTNCTGGCGAAGTTTGCGGAGTGCGTCG-CAACTTTGCNNA-GTGACGGAGNA 60
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1599R-1.in silico 1 CACCACAGTGCTGGCGAAGTTTGCGGAGTGCGTCGGCAACTTTGCCGAAGTGACGGAGCA 60
1599R-1.IR full 61 CATAATCGGACGGATCGGGGTGCATAACCACAAGATGACCTACACACACGGAGACTACCT 120
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1599R-1.in silico 61 CATAATCGGACGGATCGGGGTGCATAACCACAAGATGACCTACACACACGGAGACTACCT 120
1599R-1.IR full 121 GATCCACTACACCTGCGAGAACAAACTGGTCTACATGTGCATCACCGACAACGAGTTCGA 180
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1599R-1.in silico 121 GATCCACTACACCTGCGAGAACAAACTGGTCTACATGTGCATCACCGACAACGAGTTCGA 180
1599R-1.IR full 181 ACGGTCGCGGGCCTTCCTCTTCTTGGCGGATATCAAGCAGAAGTTTATCCAGACTTACGG 240
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1599R-1.in silico 181 ACGGTCGCGGGCCTTCCTCTTCTTGGCGGATATCAAGCAGAAGTTTATCCAGACTTACGG 240
1599R-1.IR full 241 CCTACAGGTGGCCACCGCCATCGCCTACTCCATGAACACCGAGTTCTCCAAGATCCTGGC 300
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1599R-1.in silico 241 CCTACAGGTGGCCACCGCCATCGCCTACTCCATGAACACCGAGTTCTCCAAGATCCTGGC 300
1599R-1.IR full 301 CCAGCAGATGGTCTATTTCAGTCAGTCCCGGGAGGTGGACACCATTTCGCGAGTACATGG 360
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1599R-1.in silico 301 CCAGCAGATGGTCTATTTCAGTCAGTCCCGGGAGGTGGACACCATTTCGCGAGTACATGG 360
1599R-1.IR full 361 TCAGATTGACGAGCTTAAAGACATTATGGTTAAGAATATTGACAGCTTGCGGGATCGCGG 420
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1599R-1.in silico 361 TCAGATTGACGAGCTTAAAGACATTATGGTTAAGAATATTGACAGCTTGCGGGATCGCGG 420
1599R-1.IR full 421 CGAGAAACTAGAGCTGCTCGTCAACAAGACCGAAAACTTGAGCAATAATTCCGTTGCATT 480
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1599R-1.in silico 421 CGAGAAACTAGAGCTGCTCGTCAACAAGACCGAAAACTTGAGCAATAATTCCGTTGCATT 480
1599R-1.IR full 481 CCGTAAGGCCTCCCGAAATT 500
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1599R-1.in silico 481 CCGTAAGGCCTCCCGAAATT 500
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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