| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
15342R-2 |
| Symbol |
sdt |
Full Name |
stardust |
| CG No |
CG32717 |
Old CG No |
CG15342 |
| Synonyms |
PALS1, Std, CG15341, CG15339, std, anon-EST:fe2E6, l(1)7Ef, CG1617, CG15340, CG12658, CG15342, CG32717, sdt, stardust, anon-fast-evolving-2E6, pal1, Sdt |
| Accession No (Link to NCBI) |
NM_206652.1 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Hochapfel F, Denk L, Mendl G, Schulze U, Maaßen C, Zaytseva Y, Pavenstädt H, Weide T, Rachel R, Witzgall R, Krahn MP.
Distinct functions of Crumbs regulating slit diaphragms and endocytosis in Drosophila nephrocytes.
Cell Mol Life Sci (2017) 74(24) 4573-4586
[
PubMed ID = 28717874
]
[
RRC reference
]
Wang H, Qiu Z, Xu Z, Chen SJ, Luo J, Wang X, Chen J.
aPKC is a key polarity determinant in coordinating the function of three distinct cell polarities during collective migration.
Development (2018) 145(9)
[
PubMed ID = 29636381
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGTCGTGTCCACTTTGCACATA |
| Primer Seq. 3' |
aatctagaggtaccTTGACTTGCCTGTTGTTGTCG |
| Predicted Fragment Size |
412 |
| IR fragment full Seq |
0001 GTCGTGTCCA CTTTGCACAT AACGCTGGAG AACAACGGCA ATGTTGCTGC GGGGCCAGCC
0061 TGCTGCCGTT GCTGTCCTGC CAGTAGTACG TTGGGGCAGC AACATCGCCG ACCAAGTTTG
0121 CCGTGCTGTC GGCGCAGCAG CTGCAACTGC AACTGCAGCA GCAGCAGCAG CAGCAGAACG
0181 AAAAGGAGAA CCATATGAAC AATAATAACA ATAACAGCGA CTATTGTGAT ATGAATGGCA
0241 ATGGAGTTGG AATGGGAAAC GGTGGTAGTG GTGGACCGGG ATCTCTGACC CCCCAATCCC
0301 CCGACCAATA TGTCGGCTCA CCTGTATCAT CCGCTGCCAC GCCCCATGCG CATCCGCCTC
0361 CGCCCTGCGT CGCGGCATTC AAATTCAACG ATCCTCGACG CGTTTGCGAC AACAACAGG |
| in silico PCR Fragment |
0001 GTCGTGTCCA CTTTGCACAT AACGCTGGAG AACAACGGCA ATGTTGCTGC GGGG-CAGCC
0061 TGCTGCCGTT GCTG--CTGC CAGT-GT-CG TTGGGGCAGC AACATCGCCG ACCAAGTTTG
0121 CCGTGCTGTC GGCGCAGCAG CTGCAACTGC AACTGCAGCA GCAGCAGCAG CAGCAGAACG
0181 AAAAGGAGAA CCATATGAAC AATAATAACA ATAACAGCGA CTATTGTGAT ATGAATGGCA
0241 ATGGAGTTGG AATGGGAAAC GGTGGTAGTG GTGGACCGGG ATCTCTGACC CCCCAATCCC
0301 CCGACCAATA TGTCGGCTCA CCTGTATCAT CCGCTGCCAC GCCCCA-GCG CA-CCGCCTC
0361 CGCCCTGCGT CGCGGCATTC AAATTCAACG ATCCTCGACG CGTTTGCGAC AACAACAGG |
| Assemble Data |
15342R-2.IR_full 1 GTCGTGTCCACTTTGCACATAACGCTGGAGAACAACGGCAATGTTGCTGCGGGGCCAGCC 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
15342R-2.in silico 1 GTCGTGTCCACTTTGCACATAACGCTGGAGAACAACGGCAATGTTGCTGCGGGG-CAGCC 60
15342R-2.IR_full 61 TGCTGCCGTTGCTGTCCTGCCAGTAGTACGTTGGGGCAGCAACATCGCCGACCAAGTTTG 120
|||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||
15342R-2.in silico 61 TGCTGCCGTTGCTG--CTGCCAGT-GT-CGTTGGGGCAGCAACATCGCCGACCAAGTTTG 120
15342R-2.IR_full 121 CCGTGCTGTCGGCGCAGCAGCTGCAACTGCAACTGCAGCAGCAGCAGCAGCAGCAGAACG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15342R-2.in silico 121 CCGTGCTGTCGGCGCAGCAGCTGCAACTGCAACTGCAGCAGCAGCAGCAGCAGCAGAACG 180
15342R-2.IR_full 181 AAAAGGAGAACCATATGAACAATAATAACAATAACAGCGACTATTGTGATATGAATGGCA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15342R-2.in silico 181 AAAAGGAGAACCATATGAACAATAATAACAATAACAGCGACTATTGTGATATGAATGGCA 240
15342R-2.IR_full 241 ATGGAGTTGGAATGGGAAACGGTGGTAGTGGTGGACCGGGATCTCTGACCCCCCAATCCC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15342R-2.in silico 241 ATGGAGTTGGAATGGGAAACGGTGGTAGTGGTGGACCGGGATCTCTGACCCCCCAATCCC 300
15342R-2.IR_full 301 CCGACCAATATGTCGGCTCACCTGTATCATCCGCTGCCACGCCCCATGCGCATCCGCCTC 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
15342R-2.in silico 301 CCGACCAATATGTCGGCTCACCTGTATCATCCGCTGCCACGCCCCA-GCGCA-CCGCCTC 360
15342R-2.IR_full 361 CGCCCTGCGTCGCGGCATTCAAATTCAACGATCCTCGACGCGTTTGCGACAACAACAGG 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15342R-2.in silico 361 CGCCCTGCGTCGCGGCATTCAAATTCAACGATCCTCGACGCGTTTGCGACAACAACAGG 419
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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