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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 1418R-1 
 Symbol CG1418  Full Name CG1418 
 CG No CG1418  Old CG No CG1418 
 Synonyms CG1418 
 Accession No (Link to NCBI)  
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees late pharate adult 
 Map Viewer
 Reference
[Please submit your publication]
Ito S, Ueda T, Ueno A, Nakagawa H, Taniguchi H, Kayukawa N, Miki T.
A genetic screen in Drosophila for regulators of human prostate cancer progression.
Biochem. Biophys. Res. Commun. (2014) 451(4) 548-55 [ PubMed ID = 25117438 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgATGGCACACACTGGCGGGAAC 
 Primer Seq. 3'
aatctagaggtaccACGAAGCATGAAGCACCCAGC 
 Predicted Fragment Size
500 
 IR fragment full Seq
 
 in silico PCR Fragment
 
 Assemble Data

1418R-1.IR full       1   ATGGCACACACTGGCGGGAACCTATCCGGTAACATGCAGCCGCCACCGCCTTCCGGAGGC 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     1   ATGGCACACACTGGCGGGAACCTATCCGGTAACATGCAGCCGCCACCGCCTTCCGGAGGC 60


1418R-1.IR full       61  AGGTTCTCCGTGGACATGCAAAGCCTGCCCTCGCTATCCAACCTGCCATCACCGCTGCAG 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     61  AGGTTCTCCGTGGACATGCAAAGCCTGCCCTCGCTATCCAACCTGCCATCACCGCTGCAG 120


1418R-1.IR full       121 ATCTTTCAAATGGTCCGAAACTCCCTGCGGCCCTGGGTAGTCTTCTTCAACATCAACAAT 180
                          ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     121 ATCTTCCAAATGGTCCGAAACTCCCTGCGGCCCTGGGTAGTCTTCTTCAACATCAACAAT 180


1418R-1.IR full       181 TTCAAAACGGCCATCAGCATGCAGCGGCTAAATAGCCGGGTTATTCGGAATCTCTCCTAT 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     181 TTCAAAACGGCCATCAGCATGCAGCGGCTAAATAGCCGGGTTATTCGGAATCTCTCCTAT 240


1418R-1.IR full       241 TTTCAGGCCAACTACGTTTTCATCTTTTTTGTACTGATGATATACTGCCTCATCACGGCT 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     241 TTTCAGGCCAACTACGTTTTCATCTTTTTTGTACTGATGATATACTGCCTCATCACGGCT 300


1418R-1.IR full       301 CCCTGCATTCTGCTGGTCATCCTGGNTTCCGCTTTTGGCTGCCATAAGNTNNNNNN-CGC 360
                          ||||||||||||||||||||||||| |||||||||||||||||||||| |       |||
1418R-1.in silico     301 CCCTGCATTCTGCTGGTCATCCTGGCTTCCGCTTTTGGCTGCCATAAGCTGCGCGTGCGC 360


1418R-1.IR full       361 AACAGTAACATTACCATCGTGGGACAACAACTGACGCCCAGNCAGCAGATCATCGCACTC 420
                          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
1418R-1.in silico     361 AACAGTAACATTACCATCGTGGGACAACAACTGACGCCCAGCCAGCAGATCATCGCACTC 420


1418R-1.IR full       421 AATCTGGCGACGGCACCAGTGCTATTCCTGGTGGGCGCGGGTGCGGTTTTGTTTTGGACG 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1418R-1.in silico     421 AATCTGGCGACGGCACCAGTGCTATTCCTGGTGGGCGCGGGTGCGGTTTTGTTTTGGACG 480


1418R-1.IR full       481 CTGGGTGCTTCATGCTTCGT 500
                          ||||||||||||||||||||
1418R-1.in silico     481 CTGGGTGCTTCATGCTTCGT 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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