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Notification of resumption of orders:
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Orders have been suspended as a response to the COVID-19 infection, but it will be resumed today, May 11. However, we would like to set our organizational framework that prioritizes the maintenance of stocks for the time being. In addition, due to delays in delivery of postal items, it is expected that the flies you ordered will not reach you in normal period. We apologize for the inconvenience.
Thank you for your understanding.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
13746R-2 |
| Symbol |
MrgBP |
Full Name |
MrgBP |
| CG No |
CG13746 |
Old CG No |
CG13746 |
| Synonyms |
dMrgB, dMrgBP, CG13746, MrgBP |
| Accession No (Link to NCBI) |
NM_136573.2 |
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
|
Ito S, Ueda T, Ueno A, Nakagawa H, Taniguchi H, Kayukawa N, Miki T.
A genetic screen in Drosophila for regulators of human prostate cancer progression.
Biochem. Biophys. Res. Commun. (2014) 451(4) 548-55
[
PubMed ID = 25117438
]
[
RRC reference
]
Ohhara Y, Nakamura A, Kato Y, Yamakawa-Kobayashi K.
Chaperonin TRiC/CCT supports mitotic exit and entry into endocycle in Drosophila.
PLoS Genet. (2019) 15(4) e1008121
[
PubMed ID = 31034473
]
[
RRC reference
]
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| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGCCAAGGACAAGGGTCTGGCT |
| Primer Seq. 3' |
aatctagaggtaccCCGGCGTTTTGGTTGCAGGTG |
| Predicted Fragment Size |
433 |
| IR fragment full Seq |
0001 GCCAAGAGAC AAGGGTCTGG CTGTGAGNAG CCGGAAcgGC GGCCCCCTTA CCGGCCGCCC
0061 TCGACCACGA GTGGTCCGCC GAGGAAGAGC TGCAGCTGTT CCATGCAATG GAAGGCCTGC
0121 GCCCGGTGGG CATCAACAAG CACTTCTACA TGTCCTGCAT TGTCCAGCGT CTGTCCAAGT
0181 CGCTGAACCG TGAAATGCCC AGTGAGCTGA TCTGGCGCCA CCTGGGCACC ATGTACAAGC
0241 TGAAGGAACT GGACGATCTG GAGTCGCTGC CCTTTCCCAA CGAGGAGCGC GAGTTCAGCC
0301 TGCCGGAGCA GGATTACGGA ACGCTACAGA CCAAAAAGAC GGTGGAAGTG CATGCCAACG
0361 AGGAGGCTGC AGAGGCACAG TCGGCCCCTC CAACAGCAGA GACCAATGGC AAAGCTCCAC
0421 CTGCAACCAA AACGCCGG |
| in silico PCR Fragment |
0001 GCCAAG-GAC AAGGGTCTGG CTGTG----G CCGGAACGGC GGCCCCCTTA CCGGCCGCCC
0061 TCGACCACGA GTGGTCCGCC GAGGAAGAGC TGCAGCTGTT CCATGCAATG GAAGGCCTGC
0121 GCCCGGTGGG CATCAACAAG CACTTCTACA TGTCCTGCAT TGTCCAGCGT CTGTCCAAGT
0181 CGCTGAACCG TGAAATGCCC AGCGAGCTGA TCTGGCGCCA CCTGGGCACC ATGTACAAGC
0241 TGAAGGAACT GGACGATCTG GAGTCGCTGC CCTTTCCCAA CGAGGAGCGC GAGTTCAGCC
0301 TGCCGGAGCA GGATTACGGA ACGCTACAGA CCAAAAAGAC GGTGGAAGTG CATGCCAACG
0361 AGGAGGCTGC AGAGGCACAG TCGGCCCCTC CAACAGCAGA GACCAATGGC AAAGCTCCAC
0421 CTGCAACCAA AACGCCGG |
| Assemble Data |
13746R-2.IR_full 1 GCCAAGAGACAAGGGTCTGGCTGTGAGNAGCCGGAACGGCGGCCCCCTTACCGGCCGCCC 60
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
13746R-2.in silico 1 GCCAAG-GACAAGGGTCTGGCTGTG----GCCGGAACGGCGGCCCCCTTACCGGCCGCCC 60
13746R-2.IR_full 61 TCGACCACGAGTGGTCCGCCGAGGAAGAGCTGCAGCTGTTCCATGCAATGGAAGGCCTGC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13746R-2.in silico 61 TCGACCACGAGTGGTCCGCCGAGGAAGAGCTGCAGCTGTTCCATGCAATGGAAGGCCTGC 120
13746R-2.IR_full 121 GCCCGGTGGGCATCAACAAGCACTTCTACATGTCCTGCATTGTCCAGCGTCTGTCCAAGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13746R-2.in silico 121 GCCCGGTGGGCATCAACAAGCACTTCTACATGTCCTGCATTGTCCAGCGTCTGTCCAAGT 180
13746R-2.IR_full 181 CGCTGAACCGTGAAATGCCCAGTGAGCTGATCTGGCGCCACCTGGGCACCATGTACAAGC 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
13746R-2.in silico 181 CGCTGAACCGTGAAATGCCCAGCGAGCTGATCTGGCGCCACCTGGGCACCATGTACAAGC 240
13746R-2.IR_full 241 TGAAGGAACTGGACGATCTGGAGTCGCTGCCCTTTCCCAACGAGGAGCGCGAGTTCAGCC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13746R-2.in silico 241 TGAAGGAACTGGACGATCTGGAGTCGCTGCCCTTTCCCAACGAGGAGCGCGAGTTCAGCC 300
13746R-2.IR_full 301 TGCCGGAGCAGGATTACGGAACGCTACAGACCAAAAAGACGGTGGAAGTGCATGCCAACG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13746R-2.in silico 301 TGCCGGAGCAGGATTACGGAACGCTACAGACCAAAAAGACGGTGGAAGTGCATGCCAACG 360
13746R-2.IR_full 361 AGGAGGCTGCAGAGGCACAGTCGGCCCCTCCAACAGCAGAGACCAATGGCAAAGCTCCAC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13746R-2.in silico 361 AGGAGGCTGCAGAGGCACAGTCGGCCCCTCCAACAGCAGAGACCAATGGCAAAGCTCCAC 420
13746R-2.IR_full 421 CTGCAACCAAAACGCCGG 438
||||||||||||||||||
13746R-2.in silico 421 CTGCAACCAAAACGCCGG 438
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
415 |
0 |
2 |
2 |
NM_136573.2 |
CG13746-RA (MrgBP), mRNA |
| 0.48 |
2 |
2 |
2 |
3 |
NM_167539.1 |
CG32571-RA (CG32571), mRNA |
| 0 |
0 |
3 |
2 |
8 |
NM_079750.3 |
CG5436-RA (Hsp68), mRNA |
| 0 |
0 |
2 |
3 |
6 |
NM_001043261.1 |
CG34157-RG, transcript variant G (Dys), mRNA |
| 0 |
0 |
2 |
3 |
6 |
NM_001043258.1 |
CG34157-RA, transcript variant A (Dys), mRNA |
| 0 |
0 |
2 |
3 |
6 |
NM_001043259.1 |
CG34157-RC, transcript variant C (Dys), mRNA |
| 0 |
0 |
2 |
3 |
6 |
NM_001043257.1 |
CG34157-RH, transcript variant H (Dys), mRNA |
| 0 |
0 |
2 |
3 |
6 |
NM_001043263.1 |
CG34157-RF, transcript variant F (Dys), mRNA |
| 0 |
0 |
2 |
3 |
5 |
NM_135330.1 |
CG7356-RA, transcript variant A (CG7356), mRNA |
| 0 |
0 |
2 |
3 |
4 |
NM_133156.1 |
CG12202-RA (Nat1), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_001043256.1 |
CG34157-RB, transcript variant B (Dys), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_169632.1 |
CG6384-RB, transcript variant B (Cp190), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_079635.2 |
CG6384-RA, transcript variant A (Cp190), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_001043260.1 |
CG34157-RD, transcript variant D (Dys), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_001043262.1 |
CG34157-RE, transcript variant E (Dys), mRNA |
| 0 |
0 |
2 |
2 |
7 |
NM_140236.2 |
CG7334-RA, transcript variant A (Sug), mRNA |
| 0 |
0 |
2 |
2 |
7 |
NM_206335.1 |
CG7334-RB, transcript variant B (Sug), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_164778.1 |
CG7356-RB, transcript variant B (CG7356), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_080316.1 |
CG2655-RA (HLH3B), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_135305.3 |
CG7149-RA (CG7149), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_057546.2 |
CG3090-RA, transcript variant A (Sox14), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_134290.1 |
CG3090-RB, transcript variant B (Sox14), mRNA |
| 0 |
0 |
1 |
5 |
4 |
NM_079319.2 |
CG4153-RA (eIF-2beta), mRNA |
| 0 |
0 |
1 |
4 |
7 |
NM_143426.2 |
CG14508-RA (CG14508), mRNA |
| 0 |
0 |
1 |
4 |
3 |
NM_135017.2 |
CG15628-RA (CG15628), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_132113.2 |
CG3184-RA (CG3184), mRNA |
| 0 |
0 |
1 |
2 |
8 |
NM_057454.3 |
CG16720-RA, transcript variant A (5-HT1A), mRNA |
| 0 |
0 |
1 |
2 |
8 |
NM_166322.1 |
CG16720-RB, transcript variant B (5-HT1A), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_143574.1 |
CG15546-RA (CG15546), mRNA |
| 0 |
0 |
1 |
1 |
3 |
NM_168291.1 |
CG5939-RC, transcript variant C (Prm), mRNA |
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