| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
11642R-3 |
| Symbol |
TRAM |
Full Name |
TRAM |
| CG No |
CG11642 |
Old CG No |
CG11642 |
| Synonyms |
CG11642, CG18830, EG:BACR7A4.5, TRAM |
| Accession No (Link to NCBI) |
|
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
|
Ito S, Ueda T, Ueno A, Nakagawa H, Taniguchi H, Kayukawa N, Miki T.
A genetic screen in Drosophila for regulators of human prostate cancer progression.
Biochem. Biophys. Res. Commun. (2014) 451(4) 548-55
[
PubMed ID = 25117438
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCATTAAACCGGGACTCGGTCG |
| Primer Seq. 3' |
aatctagaggtaccAGCTCATGGGATGGTCGGGGA |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
|
| in silico PCR Fragment |
|
| Assemble Data |
11642R-3.IR full 1 CATTAAACCGGGACTCGGTCGCAAGA--AGCAACAAGAACCCGCCTATCCTGAGCCACGA 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
11642R-3.in silico 1 CATTAAACCGGGACTCGGTCGCAAGACCAGCAACAAGAACCCGCCTATCCTGAGCCACGA 60
11642R-3.IR full 61 GTTTGTGATCCAGAACCACGCGGACATCATCTCCTGCGTAGCCATGGTCTTTGTGGTCGG 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
11642R-3.in silico 61 GTTTGTGATCCAGAACCACGCGGACATCATCTCCTGCGTAGCCATGGTCTTCGTGGTCGG 120
11642R-3.IR full 121 CCTGATGAACGAGTCGACGGCGGCGTTCGCCAGCGCGTTTATATCCCTGCACCACAACGT 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
11642R-3.in silico 121 CCTGATGAACGAGTCGACGGCGGCGTTCGCCAGCGCGTTCATATCCCTGCACCACAACGT 180
11642R-3.IR full 181 CAGCGGTGAGGACCCCAGCCGGGAGCAGCCATATGGCAAGCNATACACCTACATCGCCGG 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
11642R-3.in silico 181 CAGCGGTGAGGACCCCAGCCGGGAGCAGCCATATGGCAAGCCATACACCTACATCGCCGG 240
11642R-3.IR full 241 CATCAAGGATTACTGCGCGATATTCTTCTACACGCTGACCTGCATAATCATGCACGCGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11642R-3.in silico 241 CATCAAGGATTACTGCGCGATATTCTTCTACACGCTGACCTGCATAATCATGCACGCGAT 300
11642R-3.IR full 301 CATCCAGGAGTTCGTGCTGGACAAGATCAGCAAAAAACTACACCTGTCCAAGTTCAAGCT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11642R-3.in silico 301 CATCCAGGAGTTCGTGCTGGACAAGATCAGCAAAAAACTACACCTGTCCAAGTTCAAGCT 360
11642R-3.IR full 361 GGCCCGCTTCAACGAGTCCGGCCAACTGGTGGCCTTCTACCTGCTCTCCTTCGTCTGGGG 420
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11642R-3.in silico 361 GGCCCGCTTCAACGAGTCCGGCCAACTGGTGGCCTTCTACCTGCTCTCCTTCGTCTGGGG 420
11642R-3.IR full 421 CGCCCACGTGCTGCTGAAGGAGGGCTACCTCGGACAGGTGGCCCAGCTGTGGGAGGGCTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11642R-3.in silico 421 CGCCCACGTGCTGCTGAAGGAGGGCTACCTCGGACAGGTGGCCCAGCTGTGGGAGGGCTT 480
11642R-3.IR full 481 CCCCGACCATCCCATGANNN 500
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11642R-3.in silico 481 CCCCGACCATCCCATGAGCT 500
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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