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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
11579R-2 |
| Symbol |
arm |
Full Name |
armadillo |
| CG No |
CG11579 |
Old CG No |
CG11579 |
| Synonyms |
arm, Arm, Beta-cat, Beta-catenin, beta-cat, CG11579, t12687 ALR Dm, ARM, EG:86E4.6, l(1)G0410, l(1)G0192, l(1)G0234, l(1)arm, l(1)2Bv |
| Accession No (Link to NCBI) |
NM_057318.3 |
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
|
Li X, Wang Y, Wang H, Liu T, Guo J, Yi W, Li Y.
Epithelia-derived wingless regulates dendrite directional growth of drosophila ddaE neuron through the Fz-Fmi-Dsh-Rac1 pathway.
Mol Brain (2016) 9(1) 46
[
PubMed ID = 27129721
]
[
RRC reference
]
Taniue K, Nishida A, Hamada F, Sugie A, Oda T, Ui-Tei K, Tabata T, Akiyama T.
Sunspot, a link between Wingless signaling and endoreplication in Drosophila.
Development (2010) 137(10) 1755-64
[
PubMed ID = 20430750
]
[
RRC reference
]
Zhang S, Chen C, Wu C, Yang Y, Li W, Xue L.
The canonical Wg signaling modulates Bsk-mediated cell death in Drosophila.
Cell Death Dis (2015) 6 e1713
[
PubMed ID = 25855961
]
[
RRC reference
]
Minami R, Sato C, Yamahama Y, Kubo H, Hariyama T, Kimura KI.
An RNAi Screen for Genes Involved in Nanoscale Protrusion Formation on Corneal Lens in Drosophila melanogaster.
Zool. Sci. (2016) 33(6) 583-591
[
PubMed ID = 27927092
]
[
RRC reference
]
Saj A, Arziman Z, Stempfle D, van Belle W, Sauder U, Horn T, Dürrenberger M, Paro R, Boutros M, Merdes G.
A combined ex vivo and in vivo RNAi screen for notch regulators in Drosophila reveals an extensive notch interaction network.
Dev. Cell (2010) 18(5) 862-76
[
PubMed ID = 20493818
]
[
RRC reference
]
|
| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgTATCCGCCAAGGAGCAGACCC |
| Primer Seq. 3' |
aatctagaggtaccCGAGGCCTCCTTCTTAGACAG |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 TATCCGCCAA GGAGCAGACC CTCATGTGGC AGCAGAATTC GTACTTGGGC GACTCCGGCA
0061 TCCACTCGGG TGCCGTGACC CAGGTTCCAT CGCTGTCTGG CAAGGAGGAC GAGGAGATGG
0121 AGGGAGATCC ACTTATGTTC GACCTGGACA CCGGTTTCCC GCAGAATTTC ACACAAGACC
0181 AAGTGGACGA TATGAACCAG CAACTGAGCC AGACACGCTC CCAACGTGTA CGTGCTGCCA
0241 TGTTTCCGGA AACCCTGGAG GAGGGCATTG AGATTCCCTC CACCCAGTTT GATCCCCAAC
0301 AGCCGACGGC AGTGCAACGT CNTTTCGGAA CCGTCACAAA TGCTAAAGCA CGCGGTGGTC
0361 AATCTGATCA ACTACCAGGA CGACGCTGAG CTGGCAACCA GGGCCATACC CGAGTTGATC
0421 AAGCTGCTGA ACGATGAGGA TCAGGTGGTA GTTTCCCAGG CCGCCATGAT GGTCCACCAG
0481 CTGTCTAAGA AGGAGGNCTC G |
| in silico PCR Fragment |
0001 TATCCGCCAA GGAGCAGACC CTCATGTGGC AGCAGAATTC GTACTTGGGC GACTCCGGCA
0061 TCCACTCGGG TGCCGTGACC CAGGTTCCAT CGCTGTCTGG CAAGGAGGAC GAGGAGATGG
0121 AGGGAGATCC ACTTATGTTC GACCTGGACA CCGGTTTCCC GCAGAATTTC ACACAAGACC
0181 AAGTGGACGA TATGAACCAG CAACTGAGCC AGACACGCTC CCAACGTGTA CGTGCTGCCA
0241 TGTTTCCGGA AACCCTGGAG GAGGGCATTG AGATTCCCTC CACCCAGTTT GATCCCCAAC
0301 AGCCGACGGC AGTGCAACGT C-TTTCGGAA CCGTCACAAA TGCTAAAGCA CGCGGTGGTC
0361 AATCTGATCA ACTACCAGGA CGACGCTGAG CTGGCAACCA GGGCCATACC CGAGTTGATC
0421 AAGCTGCTGA ACGATGAGGA TCAGGTGGTA GTTTCCCAGG CCGCCATGAT GGTCCACCAG
0481 CTGTCTAAGA AGGAGGCCTC G |
| Assemble Data |
11579R-2.IR_full 1 TATCCGCCAAGGAGCAGACCCTCATGTGGCAGCAGAATTCGTACTTGGGCGACTCCGGCA 60
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11579R-2.in silico 1 TATCCGCCAAGGAGCAGACCCTCATGTGGCAGCAGAATTCGTACTTGGGCGACTCCGGCA 60
11579R-2.IR_full 61 TCCACTCGGGTGCCGTGACCCAGGTTCCATCGCTGTCTGGCAAGGAGGACGAGGAGATGG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11579R-2.in silico 61 TCCACTCGGGTGCCGTGACCCAGGTTCCATCGCTGTCTGGCAAGGAGGACGAGGAGATGG 120
11579R-2.IR_full 121 AGGGAGATCCACTTATGTTCGACCTGGACACCGGTTTCCCGCAGAATTTCACACAAGACC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11579R-2.in silico 121 AGGGAGATCCACTTATGTTCGACCTGGACACCGGTTTCCCGCAGAATTTCACACAAGACC 180
11579R-2.IR_full 181 AAGTGGACGATATGAACCAGCAACTGAGCCAGACACGCTCCCAACGTGTACGTGCTGCCA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11579R-2.in silico 181 AAGTGGACGATATGAACCAGCAACTGAGCCAGACACGCTCCCAACGTGTACGTGCTGCCA 240
11579R-2.IR_full 241 TGTTTCCGGAAACCCTGGAGGAGGGCATTGAGATTCCCTCCACCCAGTTTGATCCCCAAC 300
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11579R-2.in silico 241 TGTTTCCGGAAACCCTGGAGGAGGGCATTGAGATTCCCTCCACCCAGTTTGATCCCCAAC 300
11579R-2.IR_full 301 AGCCGACGGCAGTGCAACGTCNTTTCGGAACCGTCACAAATGCTAAAGCACGCGGTGGTC 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
11579R-2.in silico 301 AGCCGACGGCAGTGCAACGTC-TTTCGGAACCGTCACAAATGCTAAAGCACGCGGTGGTC 360
11579R-2.IR_full 361 AATCTGATCAACTACCAGGACGACGCTGAGCTGGCAACCAGGGCCATACCCGAGTTGATC 420
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11579R-2.in silico 361 AATCTGATCAACTACCAGGACGACGCTGAGCTGGCAACCAGGGCCATACCCGAGTTGATC 420
11579R-2.IR_full 421 AAGCTGCTGAACGATGAGGATCAGGTGGTAGTTTCCCAGGCCGCCATGATGGTCCACCAG 480
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11579R-2.in silico 421 AAGCTGCTGAACGATGAGGATCAGGTGGTAGTTTCCCAGGCCGCCATGATGGTCCACCAG 480
11579R-2.IR_full 481 CTGTCTAAGAAGGAGGNCTCG 501
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11579R-2.in silico 481 CTGTCTAAGAAGGAGGCCTCG 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
482 |
0 |
0 |
0 |
NM_057317.3 |
CG11579-RD, transcript variant D (arm), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_057318.3 |
CG11579-RA, transcript variant A (arm), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_166912.2 |
CG11579-RC, transcript variant C (arm), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_134273.2 |
CG11579-RB, transcript variant B (arm), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_206605.1 |
CG11579-RE, transcript variant E (arm), mRNA |
| 0.2 |
1 |
3 |
5 |
2 |
NM_132151.1 |
CG14427-RA (CG14427), mRNA |
| 0 |
0 |
3 |
3 |
2 |
NM_137607.3 |
CG8654-RA (CG8654), mRNA |
| 0 |
0 |
3 |
2 |
6 |
NM_139491.1 |
CG1241-RA (Atg2), mRNA |
| 0 |
0 |
3 |
2 |
6 |
NM_057454.3 |
CG16720-RA, transcript variant A (5-HT1A), mRNA |
| 0 |
0 |
3 |
2 |
6 |
NM_166322.1 |
CG16720-RB, transcript variant B (5-HT1A), mRNA |
| 0 |
0 |
3 |
2 |
5 |
NM_166992.2 |
CG2904-RA (ec), mRNA |
| 0 |
0 |
2 |
4 |
6 |
NM_058145.3 |
CG2707-RA (fs(1)Ya), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_167624.1 |
CG6335-RA, transcript variant A (Aats-his), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_133077.1 |
CG6335-RB, transcript variant B (Aats-his), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_143223.1 |
CG14238-RA (CG14238), mRNA |
| 0 |
0 |
1 |
7 |
6 |
NM_135320.2 |
CG7093-RA (CG7093), mRNA |
| 0 |
0 |
1 |
6 |
12 |
NM_132457.1 |
CG11122-RA (CG11122), mRNA |
| 0 |
0 |
1 |
5 |
15 |
NM_057643.2 |
CG10844-RA, transcript variant A (Rya-r44F), mRNA |
| 0 |
0 |
1 |
5 |
15 |
NM_057644.2 |
CG10844-RB, transcript variant B (Rya-r44F), mRNA |
| 0 |
0 |
1 |
5 |
15 |
NM_057645.2 |
CG10844-RC, transcript variant C (Rya-r44F), mRNA |
| 0 |
0 |
1 |
5 |
15 |
NM_057646.2 |
CG10844-RD, transcript variant D (Rya-r44F), mRNA |
| 0 |
0 |
1 |
5 |
6 |
NM_080034.2 |
CG32561-RA (xmas-1), mRNA |
| 0 |
0 |
1 |
5 |
3 |
NM_130681.1 |
CG14424-RA (CG14424), mRNA |
| 0 |
0 |
1 |
4 |
17 |
NM_130602.2 |
CG3480-RA (mip130), mRNA |
| 0 |
0 |
1 |
4 |
5 |
NM_170523.2 |
CG1322-RA, transcript variant A (zfh1), mRNA |
| 0 |
0 |
1 |
4 |
5 |
NM_170522.2 |
CG1322-RC, transcript variant C (zfh1), mRNA |
| 0 |
0 |
1 |
4 |
5 |
NM_057502.2 |
CG1322-RB, transcript variant B (zfh1), mRNA |
| 0 |
0 |
1 |
3 |
7 |
NM_141810.1 |
CG6719-RA (CG6719), mRNA |
| 0 |
0 |
1 |
3 |
6 |
NM_176780.1 |
CG14616-RE, transcript variant E (l(1)G0196), mRNA |
| 0 |
0 |
1 |
3 |
6 |
NM_176779.1 |
CG14616-RA, transcript variant A (l(1)G0196), mRNA |
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