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NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 10687R-1 
 Symbol Aats-asn  Full Name Asparaginyl-tRNA synthetase 
 CG No CG10687  Old CG No CG10687 
 Synonyms Aats-asn, l(2)37Ca, CG10687, AsnRS, NRS, BcDNA:GH06451, Ca, l(2)E11, l(2)37Ca)E11 
 Accession No (Link to NCBI) NM_136104.2 
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication]
Ohhara Y, Shimada-Niwa Y, Niwa R, Kayashima Y, Hayashi Y, Akagi K, Ueda H, Yamakawa-Kobayashi K, Kobayashi S.
Autocrine regulation of ecdysone synthesis by β3-octopamine receptor in the prothoracic gland is essential for Drosophila metamorphosis.
Proc. Natl. Acad. Sci. U.S.A. (2015) 112(5) 1452-7 [ PubMed ID = 25605909 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgATGCCCGCCGATCAGTTGGCT 
 Primer Seq. 3'
aatctagaggtaccACTGCAGGAAACCGGTGCCGT 
 Predicted Fragment Size
502 
 IR fragment full Seq
0001 ATGCCCGCCG ATCAGTTGGC TGAGTTAACC TTGGGTGCAA TCTTTACGTC GGAAAAGAAG 
0061 GGCAGTGATG AGTCCGGCGA TGGCAGTGAG TCCAAGCCCT TCAAGACCAT CCTGCAGGCG 
0121 ATGCGTCATG CGGGCAAGGA ACCCTTTCCC ACGATTTACG TAGACACCAA GGATCCGAAT 
0181 GCAGCGGAGC CCTACGAGCC GGCTGCCAAG TCCCAGCTAA AGAAAATTCA GAAACTGTTC 
0241 GTCAGGGAGT CGCACAAGAA TGCCGATAAG CAGCAACGGG AGGCGGAGGA TGCGGAGAAG 
0301 CGCCAGCAGA ATCTGGAGGA TGCTCGAAAG GTGAAGATCT CGGAGGATCC CAGTCTGCCG 
0361 GTGGCCCGGA AAATTCGAAT CTACGAGGGC ACTGCCAACC GCGACTCGCG TGTCAAGGTC 
0421 TACGGTTGGG TGCATCGTCT GCGTCGTCAG GGCAAGTCCC TGATCTTCAT AACACTGCGC 
0481 GACGGCACCG GTTTCCTGCA GT 
 in silico PCR Fragment
0001 ATGCCCGCCG ATCAGTTGGC TGAGTTAACC TTGGGTGCAA TCTTTACGTC GGAAAAGAAG 
0061 GGTAGTGATG AGTCCGGCGA TGGCAGTGAG TCCAAGCCCT TCAAGACCAT CCTGCAGGCG 
0121 ATGCGTCATG CGGGCAAGGA ACCCTTTCCC ACGATTTACG TAGACACCAA GGATCCGAAT 
0181 GCAGCGGAGC CCTACGAGCC GGCTGCCAAG TCCCAGCTGA AGAAAATTCA GAAACTGTTC 
0241 GTCAGGGAGT CGCACAAGAA TGCCGATAAG CTGCAACGGG AGGCGGAGGA TGCGGAGAAG 
0301 CGCCAGCAGA ATCTGGAGGA TGCTCGAAAG GTGAAGATCT CGGAGGATCC CAGTCTGCCG 
0361 GTGGCCCGGA AAATTCGAAT CTACGAGGGC ACTGCCAACC GCGACTCGCG TGTCAAGGTC 
0421 TACGGTTGGG TGCATCGTCT GCGTCGTCAG GGCAAGTCCC TGATCTTCAT AACACTGCGC 
0481 GACGGCACCG GTTTCCTGCA GT 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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