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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 9903R-2 
 Symbol CG9903  Full Name CG9903 
 CG No CG9903  Old CG No CG9903 
 Synonyms CG9903 
 Accession No (Link to NCBI) NM_132904.1 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgCGATCTGAGTATGGCGACCTG 
 Primer Seq. 3'
aatctagaggtaccACAAATCGACTGACCACACCC 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 CGATCTGAGT ATGGCGACCT GGCCGGCAAT TGGCTGGTGG ATTATGATCG AGACGAGCTG 
0061 AATTTTTTTG AGGATTCGAC TTGGAGCGTG GATTTGCACA TATACAATGT GTTACCGAAG 
0121 GACTCTTCGC TGGATTACTA CTTTGTGGTG TACTCCAAGG ATGATCGGAG GGCGTCATCG 
0181 CCACCGCTGG AGATAAAGAA GGAGGATTTC GATCTGTTGG GCAGCTGGCG GGGAGCGCTA 
0241 TATGTGACTG GAGTTCGCTT TGGATACAGT TCACTGGAGG TGGAACTGAA GTCCGGTGCG 
0301 GTGACGGAGA CATATCCAAA ACCCCTGCCA ATAACAGTGC TCAGAACACA GGTGGTGGAC 
0361 GAACGCATCA CCACCTATGT GTCCGCCGCC TTGNCTCTGC TGATGTTTCT CAATCTCGGA 
0421 ACAGTATTGG ATATGCAGCg CCTGGCGGGC ATCATCTGCC GACCGGTGGG ANCCTGTGGT 
0481 GGGTGTGGTC AGTCGATTTG T 
 in silico PCR Fragment
0001 CGATCTGAGT ATGGCGACCT GGCCGGCAAT TGGCTGGTGG ATTATGATCG AGACGAGCTG 
0061 AATTTTTTTG AGGATTCGAC TTGGAGCGTG GATTTGCACA TATACAATGT GTTACCGAAG 
0121 GACTCTTCGC TGGATTACTA CTTTGTGGTG TACTCCAAGG ATGATCGGAG GGCGTCATCG 
0181 CCACCGCTGG AGATAAAGAA GGAGGATTTC GATCTGTTGG GCAGCTGGCG GGGAGCGCTA 
0241 TATGTGACTG GAGTTCGCTT TGGATACAGT TCACTGGAGG TGGAACTGAA GTCCGGTGCG 
0301 GTGACGGAGA CATATCCAAA ACCCCTGCCA ATAACAGTGC TCAGAACACA GGTGGTGGAC 
0361 GAACGCATCA CCACCTATGT GTCCGCCGCC TTGGCTCTGC TGATGTTTCT CAATCTCGGA 
0421 ACAGTATTGG ATATGCAGCG CCTGGCGGGC ATCATCTGCC GACCGGTGGG A-CCTGTGGT 
0481 GGGTGTGGTC AGTCGATTTG T 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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