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Notification of resumption of orders:

Orders have been suspended as a response to the COVID-19 infection, but it will be resumed today, May 11. However, we would like to set our organizational framework that prioritizes the maintenance of stocks for the time being. In addition, due to delays in delivery of postal items, it is expected that the flies you ordered will not reach you in normal period. We apologize for the inconvenience.

Thank you for your understanding.

NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 8671R-2 
 Symbol CG8671  Full Name CG8671 
 CG No CG8671  Old CG No CG8671 
 Synonyms anon-WO0118547.182, CG8671 
 Accession No (Link to NCBI) NM_165365.1 
 Inserted Chr. ll 
 Insertional Mutation  lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgCAGGCATGGCCTTTATGATGA 
 Primer Seq. 3'
aatctagaggtaccAGGCTTGCTCTGCTTGCTTTT 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 CAGGCATGGC CTTTATGATG AAAAAGAAGA AGTACAAGTT CAACGTTGAA GTGCAGCTGC 
0061 AGGATTTGGT AGAGGTGGCC CTGGTCAATG AGGTGCTGTT CGCAAAGATA CGGTTGCTCG 
0121 ATGGAGGTTC CTTTCAGGAG TACAGTAGTC GCGAGGAAGT GCGCAACCAT CGAGTAGAAT 
0181 GGAACCGCAG CTTTGAGTTT CCTTGCAAGA TGAGCGCGAA TGCTTCAACC GGCGTTTTAG 
0241 ATCCTTGCCA TCTGCGTATA TCAATACGCA AAGAAATGAA GGGCGGACGA AGTTACTATA 
0301 AGCTTGGTTT TATCGACCTC AATCTGGCCG AATTCGcCGG CGCCGGCCTC ACCTCCCGTC 
0361 GGTTTCTCCT GGAGGGCTAT GACTCAAGAC ACCGCCTAGA CAACTCGATG TTGCGTGTGA 
0421 GCATTAAGAT GCATATGCTT AGCGGTGACA TTCTGTTCAA AGCACCCACG CCAAATCTAA 
0481 AAAGCAAGCA GAGCAAGCCT  
 in silico PCR Fragment
0001 CAGGCATGGC CTTTATGATG AAAAAGAAGA AGTACAAGTT CAACGTTGAA GTGCAGCTGC 
0061 AGGATTTGGT AGAGGTGGCC CTGGTCAATG AGGTGCTGTT CGCAAAGATA CGGTTGCTCG 
0121 ATGGAGGTTC CTTTCAGGAG TACAGTAGTC GCGAGGAAGT GCGCAACCAT CGAGTAGAAT 
0181 GGAACCGCAG CTTTGAGTTT CCTTGCAAGA TGAGCGCGAA TGCTTCAACC GGCGTTTTAG 
0241 ATCCTTGCCA TCTGCGTATA TCAATACGCA AAGAAATGAA GGGCGGACGA AGTTACTATA 
0301 AGCTTGGTTT TATCGACCTC AATCTGGCCG AATTCGCCGG CGCCGGCCTC ACCTCCCGTC 
0361 GGTTTCTCCT GGAGGGCTAT GACTCAAGAC ACCGCCTAGA CAACTCGATG TTGCGTGTGA 
0421 GCATTAAGAT GCATATGCTT AGCGGTGACA TTCTGTTCAA AGCACCCACG CCAAATCTAA 
0481 AAAGCAAGCA GAGCAAGCCT  
 Assemble Data

8671R-2.IR_full       1   CAGGCATGGCCTTTATGATGAAAAAGAAGAAGTACAAGTTCAACGTTGAAGTGCAGCTGC 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     1   CAGGCATGGCCTTTATGATGAAAAAGAAGAAGTACAAGTTCAACGTTGAAGTGCAGCTGC 60


8671R-2.IR_full       61  AGGATTTGGTAGAGGTGGCCCTGGTCAATGAGGTGCTGTTCGCAAAGATACGGTTGCTCG 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     61  AGGATTTGGTAGAGGTGGCCCTGGTCAATGAGGTGCTGTTCGCAAAGATACGGTTGCTCG 120


8671R-2.IR_full       121 ATGGAGGTTCCTTTCAGGAGTACAGTAGTCGCGAGGAAGTGCGCAACCATCGAGTAGAAT 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     121 ATGGAGGTTCCTTTCAGGAGTACAGTAGTCGCGAGGAAGTGCGCAACCATCGAGTAGAAT 180


8671R-2.IR_full       181 GGAACCGCAGCTTTGAGTTTCCTTGCAAGATGAGCGCGAATGCTTCAACCGGCGTTTTAG 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     181 GGAACCGCAGCTTTGAGTTTCCTTGCAAGATGAGCGCGAATGCTTCAACCGGCGTTTTAG 240


8671R-2.IR_full       241 ATCCTTGCCATCTGCGTATATCAATACGCAAAGAAATGAAGGGCGGACGAAGTTACTATA 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     241 ATCCTTGCCATCTGCGTATATCAATACGCAAAGAAATGAAGGGCGGACGAAGTTACTATA 300


8671R-2.IR_full       301 AGCTTGGTTTTATCGACCTCAATCTGGCCGAATTCGCCGGCGCCGGCCTCACCTCCCGTC 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     301 AGCTTGGTTTTATCGACCTCAATCTGGCCGAATTCGCCGGCGCCGGCCTCACCTCCCGTC 360


8671R-2.IR_full       361 GGTTTCTCCTGGAGGGCTATGACTCAAGACACCGCCTAGACAACTCGATGTTGCGTGTGA 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     361 GGTTTCTCCTGGAGGGCTATGACTCAAGACACCGCCTAGACAACTCGATGTTGCGTGTGA 420


8671R-2.IR_full       421 GCATTAAGATGCATATGCTTAGCGGTGACATTCTGTTCAAAGCACCCACGCCAAATCTAA 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8671R-2.in silico     421 GCATTAAGATGCATATGCTTAGCGGTGACATTCTGTTCAAAGCACCCACGCCAAATCTAA 480


8671R-2.IR_full       481 AAAGCAAGCAGAGCAAGCCT 500
                          ||||||||||||||||||||
8671R-2.in silico     481 AAAGCAAGCAGAGCAAGCCT 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
cv 0mm 1mm 2mm 3mm target transcript off target name
100   482  NM_165365.1  CG8671-RA, transcript variant A (CG8671), mRNA 
100   482  NM_136259.2  CG8671-RB, transcript variant B (CG8671), mRNA 
0   NM_135708.1  CG17211-RA (CG17211), mRNA 
0   NM_136494.2  CG2915-RA, transcript variant A (CG2915), mRNA 
0   NM_165577.1  CG2915-RB, transcript variant B (CG2915), mRNA 
0   NM_167289.1  CG1572-RB, transcript variant B (CG1572), mRNA 
0   NM_132498.1  CG1572-RA, transcript variant A (CG1572), mRNA 
0   NM_143033.2  CG5807-RA (CG5807), mRNA 
0   13  NM_140709.1  CG13724-RA (CG13724), mRNA 
0   NM_134988.1  CG15432-RA (CG15432), mRNA 
0   14  NM_168387.1  CG6711-RA (Taf2), mRNA 
0   NM_166245.1  CG4966-RB, transcript variant B (CG4966), mRNA 
0   NM_137402.2  CG4966-RA, transcript variant A (CG4966), mRNA 
0   NM_137688.1  CG3216-RA, transcript variant A (CG3216), mRNA 
0   NM_166415.1  CG3216-RB, transcript variant B (CG3216), mRNA 
0   NM_164582.1  CG3054-RA, transcript variant A (l(2)k05819), mRNA 
0   NM_139399.1  CG13921-RA, transcript variant A (CG13921), mRNA 
0   NM_206235.1  CG13921-RB, transcript variant B (CG13921), mRNA 
0   NM_143594.1  CG15561-RA (CG15561), mRNA 
0   NM_169531.1  CG9412-RD, transcript variant D (rin), mRNA 
0   NM_080168.2  CG9412-RB, transcript variant B (rin), mRNA 
0   NM_169530.1  CG9412-RC, transcript variant C (rin), mRNA 
0   NM_169532.1  CG9412-RE, transcript variant E (rin), mRNA 
0   NM_169533.1  CG9412-RA, transcript variant A (rin), mRNA 
0   NM_139547.1  CG12077-RA (CG12077), mRNA 
0   NM_164771.2  CG7179-RA (CG7179), mRNA 
0   NM_136834.1  CG13204-RA, transcript variant A (CG13204), mRNA 
0   NM_140894.2  CG8733-RA (Cyp305a1), mRNA 
0   NM_079319.2  CG4153-RA (eIF-2beta), mRNA 
0   NM_080046.2  CG10986-RB (g), mRNA 

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