| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
7597Ra-3 |
| Symbol |
Cdk12 |
Full Name |
Cyclin-dependent kinase 12 |
| CG No |
CG7597 |
Old CG No |
CG7597 |
| Synonyms |
AC017581,anon-WO0140519.165,Cdk12,CDK12,CG7597,cg7597,dCDK12,gi24668141,Cyclin-dependent kinase 12 |
| Accession No (Link to NCBI) |
NM_141068.2 |
| Inserted Chr. |
lll |
| Insertional Mutation |
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| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
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| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGACGTCAGCTCAGAGGACTTC |
| Primer Seq. 3' |
aatctagaggtaccCGCCGGTCCAGTAAGGCATTG |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 GACGTCAGCT CAGAGGACTT CTCGGATCAG GAGGCAGGGG ACTTGGATGC GGACGGCGGC
0061 AAGGGTGCCG GAAACATCAA AAAACCGAAG CCAGCTCCGG ATAATCAGTT CTCCAAAGGT
0121 CGTCTTGATG CCAAGCCCGA TAAAGAGGGT TATGATAACT ACAGAAGTAG AAGGGCGGAA
0181 GACTCAAGCG ACCCAGTGGC GGCCGGATCG AGGCAAACGT CTAGCAGCGA GGCCACGAAT
0241 CCGCGGGAGG AACCTTCGCA GGCATCCAAC ACCTCGAAGG ACGAGCTGTG GGGCAGAGAG
0301 ATATACATGT CCAGCGATTC TATCGACACC GATGAGCTGG AGGCGGAAAT GAAGCGGCAG
0361 AAGCGCAAAA AGCAGAAAAA GGAAAAACAC AAACACAAGT CGAAGAAAAA GTCCAAGAAG
0421 CGCAAGAAGA AGCGGGCCAA GTCATACTCC AGCATCGATT CGATGTCAGA CAATGACATC
0481 AATGCCTTAC TGGACCGGCG |
| in silico PCR Fragment |
0001 GACGTCAGCT CAGAGGACTT CTCGGATCAG GAGGCAGGGG ACTTGGATGC GGACGCCGGC
0061 AAGGGTGCCG GAAACATCAA AAAACCGAAG CCAGCTCCGG ATAATCAGTT CTCCAAAGGT
0121 CGTCTTGATG CCAAGCCCGA TAAAGAGGGT TATGATAACT ACAGAAGTAG AAGGGCGGAA
0181 GACTCAAGCG ACCCAGTGGC GGCCGGATCG AGGCAAACGT CTAGCAGCGA GGCCACGAAT
0241 CCGCGGGAGG AACCTTCGCA GGCATCCAAC ACCTCGAAGG ACGAGCTGTG GGGCAGAGAG
0301 ATATACATGT CCAGCGATTC TATCGACACC GATGAGCTGG AGGCGGAAAT GAAGCGGCAG
0361 AAGCGCAAAA AGCAGAAAAA GGAAAAACAC AAACACAAGT CGAAGAAAAA GTCCAAGAAG
0421 CGCAAGAAGA AGCGGGCCAA GTCATACTCC AGCATCGATT CGATGTCAGA CAATGACATC
0481 AATGCCTTAC TGGACCGGCG |
| Assemble Data |
<PRE>
7597Ra-3.IR full 1 GACGTCAGCTCAGAGGACTTCTCGGATCAGGAGGCAGGGGACTTGGATGCGGACG<span class="snp"><tt>G</tt></span>CGGC 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||<span class="snp"><tt> </tt></span>||||
7597Ra-3.in silico 1 GACGTCAGCTCAGAGGACTTCTCGGATCAGGAGGCAGGGGACTTGGATGCGGACG<span class="snp"><tt>C</tt></span>CGGC 60
7597Ra-3.IR full 61 AAGGGTGCCGGAAACATCAAAAAACCGAAGCCAGCTCCGGATAATCAGTTCTCCAAAGGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 61 AAGGGTGCCGGAAACATCAAAAAACCGAAGCCAGCTCCGGATAATCAGTTCTCCAAAGGT 120
7597Ra-3.IR full 121 CGTCTTGATGCCAAGCCCGATAAAGAGGGTTATGATAACTACAGAAGTAGAAGGGCGGAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 121 CGTCTTGATGCCAAGCCCGATAAAGAGGGTTATGATAACTACAGAAGTAGAAGGGCGGAA 180
7597Ra-3.IR full 181 GACTCAAGCGACCCAGTGGCGGCCGGATCGAGGCAAACGTCTAGCAGCGAGGCCACGAAT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 181 GACTCAAGCGACCCAGTGGCGGCCGGATCGAGGCAAACGTCTAGCAGCGAGGCCACGAAT 240
7597Ra-3.IR full 241 CCGCGGGAGGAACCTTCGCAGGCATCCAACACCTCGAAGGACGAGCTGTGGGGCAGAGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 241 CCGCGGGAGGAACCTTCGCAGGCATCCAACACCTCGAAGGACGAGCTGTGGGGCAGAGAG 300
7597Ra-3.IR full 301 ATATACATGTCCAGCGATTCTATCGACACCGATGAGCTGGAGGCGGAAATGAAGCGGCAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 301 ATATACATGTCCAGCGATTCTATCGACACCGATGAGCTGGAGGCGGAAATGAAGCGGCAG 360
7597Ra-3.IR full 361 AAGCGCAAAAAGCAGAAAAAGGAAAAACACAAACACAAGTCGAAGAAAAAGTCCAAGAAG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 361 AAGCGCAAAAAGCAGAAAAAGGAAAAACACAAACACAAGTCGAAGAAAAAGTCCAAGAAG 420
7597Ra-3.IR full 421 CGCAAGAAGAAGCGGGCCAAGTCATACTCCAGCATCGATTCGATGTCAGACAATGACATC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7597Ra-3.in silico 421 CGCAAGAAGAAGCGGGCCAAGTCATACTCCAGCATCGATTCGATGTCAGACAATGACATC 480
7597Ra-3.IR full 481 AATGCCTTACTGGACCGGCG 500
||||||||||||||||||||
7597Ra-3.in silico 481 AATGCCTTACTGGACCGGCG 500
</PRE>
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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Pathways (updated: 2024/04/26)
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| KEGG Pathway |
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