National Institute of Genetics
Contact us      Quick Search       
NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
Home Home
Japanese | English  
NIG-RNAi Strains Detail
Request : Click the "Order" button to request for this stock   request request_help.gif
Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 7578R-1 
 Symbol sec71  Full Name sec71 
 CG No CG7578  Old CG No CG7578 
 Synonyms BIG1, BG:DS00797.7, CG7578, sec71 
 Accession No (Link to NCBI)  
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees larval lethal 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgATTCGGCGCTGGAGCAGATTA 
 Primer Seq. 3'
aatctagaggtaccGTTCAACATTTGGGTGAGCGT 
 Predicted Fragment Size
500 
 IR fragment full Seq
 
 in silico PCR Fragment
 
 Assemble Data

7578R-1.IR full       1   ATTCGGCGCTGGAGCAGATTAAGGCGGAGCTAATCAGTGCCGGCCAGATCGCAGAGGGCA 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     1   ATTCGGCGCTGGAGCAGATTAAGGCGGAGCTAATCAGTGCCGGCCAGATCGCAGAGGGCA 60


7578R-1.IR full       61  ATGAGCTGCCCTGTGCCGCACTCCCGCTGCCCAAGAATGATGCAGCGAGCATCATAAATG 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     61  ATGAGCTGCCCTGTGCCGCACTCCCGCTGCCCAAGAATGATGCAGCGAGCATCATAAATG 120


7578R-1.IR full       121 CGGAGACCTACTTTCTCCCCTTCGAGCTTGCCTGCAAGAGCCGCTCGCCCAGGATCGTGG 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     121 CGGAGACCTACTTTCTCCCCTTCGAGCTTGCCTGCAAGAGCCGCTCGCCCAGGATCGTGG 180


7578R-1.IR full       181 TCACCGCACTGGACTGCCTGCAGAAACTCATTGCCTATGGCCATTTGACAGGATCCATTC 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     181 TCACCGCACTGGACTGCCTGCAGAAACTCATTGCCTATGGCCATTTGACAGGATCCATTC 240


7578R-1.IR full       241 AGGACTCGGCCAATCCGGGTCACCTGCTCATCGACCGTATCGTTGTGACCATATATGGCT 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     241 AGGACTCGGCCAATCCGGGTCACCTGCTCATCGACCGTATCGTTGTGACCATATATGGCT 300


7578R-1.IR full       301 GCTTCAGTGGTCCCCAGACGGACGAGGCCGTCCAACTGCAGATAATAAAGGCTCTGCTCA 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     301 GCTTCAGTGGTCCCCAGACGGACGAGGCCGTCCAACTGCAGATAATAAAGGCTCTGCTCA 360


7578R-1.IR full       361 CGGTGGTCACCTCGCAGCATGTGGAAATCCATGAATTCACACTGCTGCAAG-TGTGCGCA 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
7578R-1.in silico     361 CGGTGGTCACCTCGCAGCATGTGGAAATCCATGAATTCACACTGCTGCAAGCTGTGCGCA 420


7578R-1.IR full       421 CCTGCTACGACATCTATTTGTCCAGCAAGAACCTGGTCAATCAGACCACAGCACGCGCTA 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7578R-1.in silico     421 CCTGCTACGACATCTATTTGTCCAGCAAGAACCTGGTCAATCAGACCACAGCACGCGCTA 480


7578R-1.IR full       481 CGCTCACCCAAATGTTGAAC 500
                          ||||||||||||||||||||
7578R-1.in silico     481 CGCTCACCCAAATGTTGAAC 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

SHIGEN - SHared Information of GENetic resources - National Institute of Genetics (NIG)
Copyright (c) National Institute of Genetics (NIG)
All rights reserved.
The NIG-Fly is a part of the National BioResource Project which started in 2002.