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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 7146R-1 
 Symbol CG7146  Full Name CG7146 
 CG No CG7146  Old CG No CG7146 
 Synonyms CG7146 
 Accession No (Link to NCBI)  
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgTGGCAACCATGTCATCTTGGG 
 Primer Seq. 3'
aatctagaggtaccGCTTCTTTGGTGCTTTTCCTG 
 Predicted Fragment Size
500 
 IR fragment full Seq
 
 in silico PCR Fragment
 
 Assemble Data

7146R-1.IR full       1   TGGCAACCATGTCATCTTGGGCACCCGCAGCGNACAG-TGATCATGTACTCTGTGGACGA 60
                          |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
7146R-1.in silico     1   TGGCAACCATGTCATCTTGGGCACCCGCAGCGGACAGCTGATCATGTACTCTGTGGACGA 60


7146R-1.IR full       61  GGAGACGGGCGTGGACATGCGGATGTTCAACAAGAACTTCAGCCGGAAACCGATCACCCA 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7146R-1.in silico     61  GGAGACGGGCGTGGACATGCGGATGTTCAACAAGAACTTCAGCCGGAAACCGATCACCCA 120


7146R-1.IR full       121 AATGGAAGTGATTGCCTCGGAGAACCTGCTCTTCGTACTCACCGACTTACAGGTGCAGGT 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7146R-1.in silico     121 AATGGAAGTGATTGCCTCGGAGAACCTGCTCTTCGTACTCACCGACTTACAGGTGCAGGT 180


7146R-1.IR full       181 GTGCGACATTCGGCGGATTGAGAGCAACTTCGCTTTCATGCACAGTGCGCCCGACACGAA 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7146R-1.in silico     181 GTGCGACATTCGGCGGATTGAGAGCAACTTCGCTTTCATGCACAGTGCGCCCGACACGAA 240


7146R-1.IR full       241 GGGATGCACCCTGTTCACCATGGACGTGGACACGCCGAAGTCCACAACCGGACGTGTGGC 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7146R-1.in silico     241 GGGATGCACCCTGTTCACCATGGACGTGGACACGCCGAAGTCCACAACCGGACGTGTGGC 300


7146R-1.IR full       301 CACCGTCATACGGGTGTGCTGCGNTATCCGGCGGCGTCTTGTGTTCTTCTTTTGGAAGGA 360
                          ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
7146R-1.in silico     301 CACCGTCATACGGGTGTGCTGCGCTATCCGGCGGCGTCTTGTGTTCTTCTTTTGGAAGGA 360


7146R-1.IR full       361 GGACAAGCTTAATTCCCTGGAATTGANCATCGAGCTCAGCGATGTGCCCAGGACACTGTG 420
                          |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
7146R-1.in silico     361 GGACAAGCTTAATTCCCTGGAATTGATCATCGAGCTCAGCGATGTGCCCAGGACACTGTG 420


7146R-1.IR full       421 CTGGGTGGGCCATGCTGTCTGCGTGGGCTTCAAAGACGAATATGTTGTTTACGATATATC 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7146R-1.in silico     421 CTGGGTGGGCCATGCTGTCTGCGTGGGCTTCAAAGACGAATATGTTGTTTACGATATATC 480


7146R-1.IR full       481 AGGAAAAGCACCAAAGAANN 500
                          ||||||||||||||||||  
7146R-1.in silico     481 AGGAAAAGCACCAAAGAAGC 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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