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NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 5444-1R-2 
 Symbol Taf4  Full Name TBP-associated factor 4 
 CG No CG5444  Old CG No CG5444 
 Synonyms TAF[[II]]110, dmTAF4, dTAF4, dTAF[[II]]110, TAF110, Taf110, TAF, TFIID, taf110, TAF[[II]], TAF[II]110, TAF4, dTAFII110, d110, CG5444, SY3-2 TAF110, TAFII110, TFIID 110, SR3-3, Taf[[II]]110, p110, l(3)72Dj, Taf4 
 Accession No (Link to NCBI) NM_079378.2 
 Inserted Chr.
 Insertional Mutation  lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgACCATCAGCATAGCCGGCAAT 
 Primer Seq. 3'
aatctagaggtaccGTGCTTGTCGTGTTGCTGTTA 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 ACCGACATCA GCATAgCCGG CAATCCCGGC GCGGTCATCT CCACGGCCCA GCTACCGAAT 
0061 ACCACCACCA TCAAGACGAT CCAGGCGGGG ATCGGTGGTC AGCATCAGGG ACTTCAGCAG 
0121 GTGCATCATG TCCAACAGCA GCAGCAGTCG CAACAGCAAC AACAGCAGCA ACAGCAGACG 
0181 CAATCCGCCG GTCAACCGCT GCTCAATTCA ATGCTGCCGG CTGGCGTGGT GGTGGGCATG 
0241 CGCCAACAGG CGCCGTCACA GCAGCAGCAG AAGAATGTGC CCACCAACCC GCTCAGTCGC 
0301 GTGGTGATCA ACTCCCACAT GGCGGGCGTG AGACCGCAGA GTCCATCGAT AACTTTAAGC 
0361 ACACTTAATA CGGGTCAGAC CCCGGCATTG CTGGTCAAGA CGGATAACGG ATTCCAGCTG 
0421 TTGCGCGTGG GCACGACGAC GGGTCCGCCG ACGGTGACAC AGACTATAAC CAACACCAGC 
0481 AATAACAGCA ACACGACAAG CAC 
 in silico PCR Fragment
0001 AC---CATCA GCATAGCCGG CAATCCCGGC GCGGTCATCT CCACGGCCCA GCTACCGAAT 
0061 ACCACCACCA TCAAGACGAT CCAGGCGGGG ATCGGTGGTC AGCATCAGGG ACTTCAGCAG 
0121 GTGCATCATG TCCAACAGCA GCAGCAGTCG CAACAGCAAC AACAGCAGCA ACAGCAGACG 
0181 CAATCCGCCG GTCAACCGCT GCTCAATTCA ATGCTGCCGG CTGGCGTGGT GGTGGGCATG 
0241 CGCCAACAGG CGCCGTCACA GCAGCAGCAG AAGAATGTGC CCACCAACCC GCTCAGTCGC 
0301 GTGGTGATCA ACTCCCACAT GGCGGGCGTG AGACCGCAGA GTCCATCGAT AACTTTAAGC 
0361 ACACTTAATA CGGGTCAGAC CCCGGCATTG CTGGTCAAGA CGGATAACGG ATTCCAGCTG 
0421 TTGCGCGTGG GCACGACGAC GGGTCCGCCG ACGGTGACAC AGACTATAAC CAACACCAGC 
0481 AATAACAGCA ACACGACAAG CAC 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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