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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 17964R-2 
 Symbol pan  Full Name pangolin 
 CG No CG34403  Old CG No CG17964 
 Synonyms FBgn0085432, CG32005, pan, dTCF, dTcf, l(4)13, Tcf, Tcf-1, TCF, DTCF, IA5, Pan, cTCF, LEF/TCF-1, LEF/TCF, Tcf/LEF, LEF-1, lethal 13, CG17964, l(4)102ABb, Lef, tcf, unnamed, pangolin, TCF/LEF, TCF/LEF1, DTcf, lef1, CG34403, PAN 
 Accession No (Link to NCBI) NM_166718.1 
 Inserted Chr. lll 
 Insertional Mutation  semi-lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgAGCAGGCATGGATCATCAGGA 
 Primer Seq. 3'
aatctagaggtaccTGCCATGATGCCACTTGAGAC 
 Predicted Fragment Size
494 
 IR fragment full Seq
0001 AGCAGGCATG GATCATCAGG AGATGATTTA TGCAGTACTG ATGAAGTGAA GATTTTTAAA 
0061 GACGAAGGAG ATCGCGAGGA TGAAAAAATA TCATCTGAGA ACTTATTAGT TGAAGAAAAG 
0121 TCTAGCTTAA TAGATTTAAC TGAAAGTGAG GAAAAGGGTC ACAAAATTTC AAGGCCGGAC 
0181 CACAGCCCTG TTTTTAATAA GCTGGACACC CACGCCCCTA GCTTTAACAT GGGTTACTTA 
0241 GTTTCTCCTT ATTCGTATGC CAATGGTTCT CCAAGTGGCT TACCGGTAAC TATGGCCAAC 
0301 AAAATTGGAC TGCCTCCGTT TTTTTGTCAC AATGCTGATC CGTTATCAAC ACCACCACCA 
0361 GCGCATTGCG GAATTCCTCC ATATCAACTG GATCCTAAGA TGGGCTTAAC TCGACCAGCG 
0421 CTATACCCAT TTGCGGGAGG TCAATATCCT TACCCAATGC TAAGTTCAGA TATGTCTCAA 
0481 GTGGCATCAT GGCA 
 in silico PCR Fragment
0001 AGCAGGCATG GATCATCAGG AGATGATTTA TGCAGTACTG ATGAAGTGAA GATTTTTAAA 
0061 GACGAAGGAG ATCGCGAGGA TGAAAAAATA TCATCTGAGA ACTTATTAGT TGAAGAAAAG 
0121 TCTAGCTTAA TAGATTTAAC TGAAAGTGAG GAAAAGGGTC ACAAAATTTC AAGGCCGGAC 
0181 CACAGCCCTG TTTTTAATAA GCTGGACACC CACGCCCCTA GCTTTAACAT GGGTTACTTA 
0241 GTTTCTCCTT ATTCGTATGC CAATGGTTCT CCAAGTGGCT TACCGGTAAC TATGGCCAAC 
0301 AAAATTGGAC TGCCTCCGTT TTTTTGTCAC AATGCTGATC CGTTATCAAC ACCACCACCA 
0361 GCGCATTGCG GAATTCCTCC ATATCAACTG GATCCTAAGA TGGGCTTAAC TCGACCAGCG 
0421 CTATACCCAT TTGCGGGAGG TCAATATCCT TACCCAATGC TAAGTTCAGA TATGTCTCAA 
0481 GTGGCATCAT GGCA 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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