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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 1424R-3 
 Symbol mst  Full Name misato 
 CG No CG1424  Old CG No CG1424 
 Synonyms CG1424, LB20, l(1)LB20, LB-20, l(1)LB14, unnamed, lLB14, l(1)19Fg, mst 
 Accession No (Link to NCBI) NM_078711.2 
 Inserted Chr. ll 
 Insertional Mutation  3 lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Álvarez-Fernández C, Tamirisa S, Prada F, Chernomoretz A, Podhajcer O, Blanco E, Martín-Blanco E.
Identification and functional analysis of healing regulators in Drosophila.
PLoS Genet (2015) 11(2) e1004965 [ PubMed ID = 25647511 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgCGTACGCGAATTACGTGGGCA 
 Primer Seq. 3'
aatctagaggtaccCAGCCCCGGCAAGACATTCAA 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 CGTACGCGAA TTACGTGGGC ACACACTTCT GGAACCAGCA GGAGGCCAAC TTTAGGTACG 
0061 GAGACGAAAG CGAACAGGTG GCCGAGGAGC AGCTGCCCAA CAATGATATT TTGTACCGTG 
0121 AAGGGCGCAA CGACCTCAAT CGTACCACCT ACACGCCCCG CCTGCTGTCC GTGGATTTGT 
0181 CCGGGACCCT GGGACATNCT GCCGGTGACC GGCGAGCNTG TACGGCAATT TTGTGCAGCG 
0241 TGATGAGGAG TTGCTGCCCC TGAGCACCGG AGAGGAATTG GAACAGGTTC GCAAGCGGGC 
0301 AGAGGAGAGC GGCGTATGCT CACCGGAGCA GCTGGAAGTG CAGGAGCAGT CGAAGGCCTC 
0361 CATTTCCGAA TATCAGCGGG ATCTGCTCAA GAATGCTGTG GTGCCCGAGA AGAACTATCA 
0421 GCTGGCAGCG ACGGCAAACA GTTGGGTGGA CTTCCTTTAC GCCAGGTATC ACCCGAGAAC 
0481 CTTGAATGTC TTGCCGGGGC TG 
 in silico PCR Fragment
0001 CGTACGCGAA TTACGTGGGC ACACACTTCT GGAACCAGCA GGAGGCCAAC TTTAGGTACG 
0061 GAGACGAAAG CGAACAGGTG GCCGAGGAGC AGCTGCCCAA CAATGATATT TTGTACCGTG 
0121 AAGGGCGCAA CGACCTCAAT CGTACCACCT ACACGCCCCG CCTGCTGTCC GTGGATTTGT 
0181 CCGGGACCCT GGGACAT-CT GCCGGTGACC GGCGAGC-TG TACGGCAATT TTGTGCAGCG 
0241 TGATGAGGAG TTGCTGCCCC TGAGCACCGG AGAGGAATTG GAACAGGTTC GCAAGCGGGC 
0301 AGAGGAGAGC GGCGTATGCT CACCGGAGCA GCTGGAAGTG CAGGAGCAGT CGAAGGCCTC 
0361 CATTTCCGAA TATCAGCGGG ATCTGCTCAA GAATGCTGTG GTGCCCGAGA AGAACTATCA 
0421 GCTGGCAGCG ACGGCAAACA GTTGGGTGGA CTTCCTTTAC GCCAGGTATC ACCCGAGAAC 
0481 CTTGAATGTC TTGCCGGGGC TG 
 Assemble Data

1644R-1.IR_full       1   TGGATCCCTCGTTCTGCTCCCCGTTGTCCTAAGAGGTGGATGTCTACTTGTCGTAACAAT 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     1   TGGATCCCTCGTTCTGCTCCCCGTTGTCCTAAGAGGTGGATGTCTACTTGTCGTAACAAT 60


1644R-1.IR_full       61  CGTTTGGCTGTGGCAAATTCTACACTTCTGGCATTGGCGACGTCTGGGCGTCCCCTTTGT 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     61  CGTTTGGCTGTGGCAAATTCTACACTTCTGGCATTGGCGACGTCTGGGCGTCCCCTTTGT 120


1644R-1.IR_full       121 TCCGGCTGCCCCATTTGTGGGGAATGTGTGGAACCTTTTGCGCGGAGCCTGCTGCTTTGG 180
                          ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
1644R-1.in silico     121 TCCGGCTGCCCCATTTGTGGGGAATGTGTGGAATCTTTTGCGTGGAGCCTGCTGCTTTGG 180


1644R-1.IR_full       181 CGATCAGTTTCGCGAGTTGTACGAGAGTAAGGAGGCTGCCGGCCGCGCCTTCGTGGGAAT 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     181 CGATCAGTTTCGCGAGTTGTACGAGAGTAAGGAGGCTGCCGGCCGCGCCTTCGTGGGAAT 240


1644R-1.IR_full       241 TGACGTGCTGCACAATCACGCACTGCTTCTTCGAGATCCGGCTCTGATCAAGCGCATTAT 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     241 TGACGTGCTGCACAATCACGCACTGCTTCTTCGAGATCCGGCTCTGATCAAGCGCATTAT 300


1644R-1.IR_full       301 GGTGGAAGACTTCGCTCAGTTCTCGAGCCGCTTTGAGACGACAGATCCCACTTGTGACAC 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     301 GGTGGAAGACTTCGCTCAGTTCTCGAGCCGCTTTGAGACGACAGATCCCACTTGTGACAC 360


1644R-1.IR_full       361 AATGGGATCGCAGAACCTTTTCTTTTCCAAATACGAGACTTGGCGGGAGACGCACAAGAT 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     361 AATGGGATCGCAGAACCTTTTCTTTTCCAAATACGAGACTTGGCGGGAGACGCACAAGAT 420


1644R-1.IR_full       421 CTTTGCGCCCTTCTTTGCTGCGGGAAAGGTGCGCAATATGTACGGGCTTCTGGAAAACAT 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1644R-1.in silico     421 CTTTGCGCCCTTCTTTGCTGCGGGAAAGGTGCGCAATATGTACGGGCTTCTGGAAAACAT 480


1644R-1.IR_full       481 TGGACAGAAGCTCGAGGAGC 500
                          ||||||||||||||||||||
1644R-1.in silico     481 TGGACAGAAGCTCGAGGAGC 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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