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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 14213R-2 
 Symbol CG14213  Full Name CG14213 
 CG No CG14213  Old CG No CG14213 
 Synonyms CAF40, CG14213 
 Accession No (Link to NCBI) NM_167675.1 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Shan L, Wu C, Chen D, Hou L, Li X, Wang L, Chu X, Hou Y, Wang Z.
Regulators of alternative polyadenylation operate at the transition from mitosis to meiosis.
J Genet Genomics (2017) 44(2) 95-106 [ PubMed ID = 28190776 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgGTGCTCAACCGAGTCCGCATA 
 Primer Seq. 3'
aatctagaggtaccGATCTCGGTGGTCAGCAGAAA 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 GTGCTCAACC GAGTCCGCAT ATGAATCCTC AGCAGCAGCA GCAGCAGCAA CAGCAGCAGC 
0061 AGCAGACCGA GCAGGAGAAG GTGTACCAGT GGATCAATGA GCTGGCCCAT CCGGACACGC 
0121 GTGAAACCGC TCTGCTCGAG CTAAGCAAGA AGCGTGAGAC GGACCTGGCC CCCATGCTGT 
0181 GGAACAGCTT CGGGACCGCC TGCGCCCTGT TGCAGGAGAT TGTTAACATC TACCCATCGA 
0241 TAACGCCGCC CACTTTGACG GCCCACCAGT CGAACCGCGT GTGCAACGCC CTGGNGCTGC 
0301 TGCAGTGCGT CGCCTCGCAC CCGGAGACTC GCACGGCCTT CCTGCAGGCC CAGATACCGC 
0361 TGTACTTGTA CCCTTTCTTG TCGACCACGT CCAAGACCAG GCCCTTCGAG TACTTGCGCC 
0421 TGACCAGTTT GGGCGTGATT GGTGCTCTGG TCAAGACCGA CGAACAGGAG GTGATCACCT 
0481 TTCTGCTGAC CACCGAGATC  
 in silico PCR Fragment
0001 GTGCTCAACC GAGTCCGCAT ATGAATCCTC AGCAGCAGCA GCAGCAGCAA CAGCAGCAGC 
0061 AGCAGACCGA GCAGGAGAAG GTGTACCAGT GGATCAATGA GCTGGCCCAT CCGGACACGC 
0121 GTGAAACCGC TCTGCTCGAG CTAAGCAAGA AGCGTGAGAC GGACCTGGCC CCCATGCTGT 
0181 GGAACAGCTT CGGGACCGCC TGCGCCCTGT TGCAGGAGAT TGTTAACATC TACCCATCGA 
0241 TAACGCCGCC CACTTTGACG GCCCACCAGT CGAACCGCGT GTGCAACGCC CTGGCGCTGC 
0301 TGCAGTGCGT CGCCTCGCAC CCGGAGACTC GCACGGCCTT CCTGCAGGCC CAGATACCGC 
0361 TGTACTTGTA CCCTTTCTTG TCGACCACGT CCAAGACCAG GCCCTTCGAG TACTTGCGCC 
0421 TGACCAGTTT GGGCGTGATT GGTGCTCTGG TCAAGACCGA CGAACAGGAG GTGATCACCT 
0481 TTCTGCTGAC CACCGAGATC  
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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