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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 1391R-3 
 Symbol sol  Full Name small optic lobes 
 CG No CG1391  Old CG No CG1391 
 Synonyms SOL, CalpD, DmSol, w5000, nofE, PC79, CG1391, sol 
 Accession No (Link to NCBI) NM_057389.4 
 Inserted Chr. ll 
 Insertional Mutation  lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
 
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgATCCGTGCTGCAGTGGTCGTG 
 Primer Seq. 3'
aatctagaggtaccTGGCGTCCTTGTAAATGGGCG 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 ATCCGTGCTG CANTGGTCGT GCACCAAATG TAACACTATC AATCCCACGG AGTTCGCTCA 
0061 AGTGCTTCAA TTGCGGCACC GTCCgNAAGG TGTTCCCCCA ACAACAGCAG CAGCAGCATC 
0121 GcAGCAGCAG CATCACCGCC TCCTGGACAG CTGATGATGC ACTGGAGCAG GAGCAGGCGG 
0181 AGAAGGGGCA GGAGAGGGAC AAGGAGAAGG GCAGGGCGGC GGTTGCCAGG AGCGAGTACA 
0241 AGCATGTGTA CAAGTCCCTG CTGCGCGGAT GCTTGAAAAG ACCACAGCGG AACAGCCAGA 
0301 ATCTGCCCGC CAACTGCGTG GATTGCGAGG ACACGCGCAA GTACATCAAG AGCTCTATTG 
0361 AGCTGTACCG CCACTTCTCG AATCCGGCCC TGAATCGGCG GTGGGTGTGC CACGCCTGCG 
0421 GCACGGACAA CAGCTCGGTC ACCTGGCACT GCCTCATCTG CGACACGGTC AGCTATCTGG 
0481 CGCCCATTTA CAAGGACGCC A 
 in silico PCR Fragment
0001 ATCCGTGCTG CAGTGGTCGT GCACCAAATG TAACACTATC AATCCCACGG AG-TCGCTCA 
0061 AGTGCTTCAA TTGCGGCACC GTCCGCAAGG TGTTCCCCCA ACAACAGCAG CAGCAGCATC 
0121 GCAGCAGCAG CATCACCGCC TCCTGGACAG CTGATGATGC ACTGGAGCAG GAGCAGGCGG 
0181 AGAAGGGGCA GGAGAGGGAC AAGGAGAAGG GCAGGGCGGC GGTTGCCAGG AGCGAGTACA 
0241 AGCATGTGTA CAAGTCCCTG CTGCGCGGAT GCTTGAAAAG ACCACAGCGG AACAGCCAGA 
0301 ATCTGCCCGC CAACTGCGTG GATTGCGAGG ACACGCGCAA GTACATCAAG AGCTCTATTG 
0361 AGCTGTACCG CCACTTCTCG AATCCGGCCC TGAATCGGCG GTGGGTGTGC CACGCCTGCG 
0421 GCACGGACAA CAGCTCGGTC ACCTGGCACT GCCTCATCTG CGACACGGTC AGCTATCTGG 
0481 CGCCCATTTA CAAGGACGCC A 
 Assemble Data
 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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