| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
10047R-1 |
| Symbol |
SytIV |
Full Name |
Synaptotagmin IV |
| CG No |
CG10047 |
Old CG No |
CG10047 |
| Synonyms |
Syt4, syt4, dsyt4, sytIV, SYT4, D.Syt IV, CG10047, SytIV |
| Accession No (Link to NCBI) |
|
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T.<br> RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc.<br> Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
|
| Comment |
balanced with SM6a, Cy
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCAGATGCCAGCGTCATGGACA |
| Primer Seq. 3' |
aatctagaggtaccCACGGTCAGCTCCTTCCCGTT |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
|
| in silico PCR Fragment |
|
| Assemble Data |
<PRE>
10047R-1.IR full 1 CAGATGCCAGCGTCATGGACACGATTGTCCCCGCCATCCTGGGACTGACTGCGGCTGCTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10047R-1.in silico 1 CAGATGCCAGCGTCATGGACACGATTGTCCCCGCCATCCTGGGACTGACTGCGGCTGCTG 60
10047R-1.IR full 61 TCCTCTCGTCAGTGGCCTGCATCTGCGCCCGGCAGATGCGC<span class="snp"><tt>N</tt></span>TCCGGAACAAGAAACAGA 120
|||||||||||||||||||||||||||||||||||||||||<span class="snp"><tt> </tt></span>||||||||||||||||||
10047R-1.in silico 61 TCCTCTCGTCAGTGGCCTGCATCTGCGCCCGGCAGATGCGC<span class="snp"><tt>C</tt></span>TCCGGAACAAGAAACAGA 120
10047R-1.IR full 121 GCCAGCACGACGCCTCGTTCCCCTTCCAGCCGACCCG<span class="snp"><tt>-</tt></span>CGACCGACCGCCGTTCGATCGC 180
|||||||||||||||||||||||||||||||||||||<span class="snp"><tt> </tt></span>||||||||||||||||||||||
10047R-1.in silico 121 GCCAGCACGACGCCTCGTTCCCCTTCCAGCCGACCCG<span class="snp"><tt>G</tt></span>CGACCGACCGCCGTTCGATCGC 180
10047R-1.IR full 181 CCAGCGGCCAG<span class="snp"><tt>N</tt></span>CGCCGCACTACTTGAAGAAGTCGCCCTCGCCGACGGGAGGCAAGCAGA 240
|||||||||||<span class="snp"><tt> </tt></span>||||||||||||||||||||||||||||||||||||||||||||||||
10047R-1.in silico 181 CCAGCGGCCAG<span class="snp"><tt>C</tt></span>CGCCGCACTACTTGAAGAAGTCGCCCTCGCCGACGGGAGGCAAGCAGA 240
10047R-1.IR full 241 TGGGACTGCTGTCGCCGATGCAGGACCAGTCCACCTCCCCGATTGCGCAACCGAATGTCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10047R-1.in silico 241 TGGGACTGCTGTCGCCGATGCAGGACCAGTCCACCTCCCCGATTGCGCAACCGAATGTCA 300
10047R-1.IR full 301 AGTACAGCGAGGAGGGAGATGGAC<span class="snp"><tt>N</tt></span>CGCCCAGCATGCGGAGCAGCAGAATGGCAATCAAC 360
||||||||||||||||||||||||<span class="snp"><tt> </tt></span>|||||||||||||||||||||||||||||||||||
10047R-1.in silico 301 AGTACAGCGAGGAGGGAGATGGAC<span class="snp"><tt>C</tt></span>CGCCCAGCATGCGGAGCAGCAGAATGGCAATCAAC 360
10047R-1.IR full 361 TGACCGTGGTGGATGGTAATGGGTTGAAGCACTCGCTGCACAACAGCCTTCACCACTCGC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10047R-1.in silico 361 TGACCGTGGTGGATGGTAATGGGTTGAAGCACTCGCTGCACAACAGCCTTCACCACTCGC 420
10047R-1.IR full 421 CGGTAGAGACGATCGCCAACGGAAGTGTGACCATTACCCTGGACGACCATTCGCTGACCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10047R-1.in silico 421 CGGTAGAGACGATCGCCAACGGAAGTGTGACCATTACCCTGGACGACCATTCGCTGACCA 480
10047R-1.IR full 481 ACGGGAAGGAGCTGACCGTG 500
||||||||||||||||||||
10047R-1.in silico 481 ACGGGAAGGAGCTGACCGTG 500
</PRE>
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
|
| Wing Disc |
GFP
 |
Puc
 |
Caspase
 |
DAPI
 |
Merge
 |
Figure
 |
|
JNK signal
|
Caspase-3 signal
|
|
|
|
Pathways (updated: 2024/04/26)
|
| KEGG Pathway |
|
