Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
18414R-1 |
Symbol |
ph-p |
Full Name |
polyhomeotic proximal |
CG No |
CG18412 |
Old CG No |
CG18414 |
Synonyms |
ph, PH, CG18412, Ph, PH-p, EG:87B1.5, CG18414, php, ph[P], ph-P, phm, ph-p |
Accession No (Link to NCBI) |
NM_057523.3 |
Inserted Chr. |
ll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K. A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction. PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Umetsu D, Dunst S, Dahmann C. An RNA interference screen for genes required to shape the anteroposterior compartment boundary in Drosophila identifies the Eph receptor. PLoS One (2014) 9(12) e114340
[
PubMed ID = 25473846
]
[
RRC reference
]
Owusu-Ansah E, Banerjee U. Reactive oxygen species prime Drosophila haematopoietic progenitors for differentiation. Nature (2009) 461(7263) 537-41
[
PubMed ID = 19727075
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCCTCGATGATGAATGCTACAG |
Primer Seq. 3' |
aatctagaggtaccCGTGGTTGAAGTTGATGTTGC |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 CCTCGATGAT GAATGCTACA GTGGGTCACC TTTCCANCTG CTCCGCCTGT AACTGTTTCT
0061 GTGACAAGCA CCGCTGTTAC TTCGTCGCCG GGTCAGCTGG TTCTCTTAAG CACGGCTAGT
0121 AGCGGTGGAG GAGGTAGCAT ACCAGCCACG CCCACCAAAG AGACACCTTC GAAAGGGCCC
0181 ACCGCAACCC TGGTGCCCAT TGGTTCGCCC AAGACTCCTG TATCAGGAAA GGACACCTGC
0241 ACTACCCCCA AATCATCTAC TCCTGCCACT GTTAGCGCAT CCGTAGAGGC CAGTAGTTCC
0301 ACAGGCGAAG CCCTGTCCAA TGGAGATGCC TCAGATAGGT CTTCCACGCC GTCAAAGGGC
0361 GCTACCACTC CCACCAGCAA GCAAAGCAAT GCAGCAGTGC AGCCACCGAG TAGCACCACT
0421 CCCAACAGTG TCAGTGGGAA AGAAGAGCCG AAGCTGGCAA CCTGCGGCAG TTTAACGTCC
0481 GCAACATCAA CTTCAACCAC G |
in silico PCR Fragment |
0001 CCTCGATGAT GAATGCTACA GTGGGTCACC TTTCCA-CTG CTCCGCCTGT AACTGTTTCT
0061 GTGACAAGCA CCGCTGTTAC TTCGTCGCCG GGTCAGCTGG TTCTCTTAAG CACGGCTAGT
0121 AGCGGTGGAG GAGGTAGCAT ACCAGCCACG CCCACCAAAG AGACACCTTC GAAAGGGCCC
0181 ACCGCAACCC TGGTGCCCAT TGGTTCGCCC AAGACTCCTG TATCAGGAAA GGACACCTGC
0241 ACTACCCCCA AATCATCTAC TCCTGCCACT GTCAGCGCAT CCGTAGAGGC CAGTAGTTCC
0301 ACAGGCGAAG CCCTGTCCAA TGGAGATGCC TCAGATAGGT CTTCCACGCC GTCAAAGGGC
0361 GCTACCACTC CCACCAGCAA GCAAAGCAAT GCAGCAGTGC AGCCACCGAG TAGCACCACT
0421 CCCAACAGTG TCAGTGGGAA AGAAGAGCCG AAGCTGGCAA CCTGCGGCAG TTTAACGTCC
0481 GCAACATCAA CTTCAACCAC G |
Assemble Data |
18414R-1.IR_full 1 CCTCGATGATGAATGCTACAGTGGGTCACCTTTCCANCTGCTCCGCCTGTAACTGTTTCT 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
18414R-1.in silico 1 CCTCGATGATGAATGCTACAGTGGGTCACCTTTCCA-CTGCTCCGCCTGTAACTGTTTCT 60
18414R-1.IR_full 61 GTGACAAGCACCGCTGTTACTTCGTCGCCGGGTCAGCTGGTTCTCTTAAGCACGGCTAGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 61 GTGACAAGCACCGCTGTTACTTCGTCGCCGGGTCAGCTGGTTCTCTTAAGCACGGCTAGT 120
18414R-1.IR_full 121 AGCGGTGGAGGAGGTAGCATACCAGCCACGCCCACCAAAGAGACACCTTCGAAAGGGCCC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 121 AGCGGTGGAGGAGGTAGCATACCAGCCACGCCCACCAAAGAGACACCTTCGAAAGGGCCC 180
18414R-1.IR_full 181 ACCGCAACCCTGGTGCCCATTGGTTCGCCCAAGACTCCTGTATCAGGAAAGGACACCTGC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 181 ACCGCAACCCTGGTGCCCATTGGTTCGCCCAAGACTCCTGTATCAGGAAAGGACACCTGC 240
18414R-1.IR_full 241 ACTACCCCCAAATCATCTACTCCTGCCACTGTTAGCGCATCCGTAGAGGCCAGTAGTTCC 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
18414R-1.in silico 241 ACTACCCCCAAATCATCTACTCCTGCCACTGTCAGCGCATCCGTAGAGGCCAGTAGTTCC 300
18414R-1.IR_full 301 ACAGGCGAAGCCCTGTCCAATGGAGATGCCTCAGATAGGTCTTCCACGCCGTCAAAGGGC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 301 ACAGGCGAAGCCCTGTCCAATGGAGATGCCTCAGATAGGTCTTCCACGCCGTCAAAGGGC 360
18414R-1.IR_full 361 GCTACCACTCCCACCAGCAAGCAAAGCAATGCAGCAGTGCAGCCACCGAGTAGCACCACT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 361 GCTACCACTCCCACCAGCAAGCAAAGCAATGCAGCAGTGCAGCCACCGAGTAGCACCACT 420
18414R-1.IR_full 421 CCCAACAGTGTCAGTGGGAAAGAAGAGCCGAAGCTGGCAACCTGCGGCAGTTTAACGTCC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18414R-1.in silico 421 CCCAACAGTGTCAGTGGGAAAGAAGAGCCGAAGCTGGCAACCTGCGGCAGTTTAACGTCC 480
18414R-1.IR_full 481 GCAACATCAACTTCAACCACG 501
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18414R-1.in silico 481 GCAACATCAACTTCAACCACG 501
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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