| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
10046Ra-5 |
| Symbol |
bru3 |
Full Name |
bruno 3 |
| CG No |
CG43744 |
Old CG No |
CG10046 |
| Synonyms |
Bru-3,bru-3,bru3,bruno-3,CG10046,cg10046,CG12478,cg12478,CG34243,CG43744,Dm Bru-3,l(3)05871,bruno3,bruno 3,lethal (3) 05871 |
| Accession No (Link to NCBI) |
NM_168557.1 |
| Inserted Chr. |
lll |
| Insertional Mutation |
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| Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
| Map Viewer |
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Reference
[Please submit your publication]
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| Comment |
balanced with TM6B
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCAGCCTGGTCGTCAAATACGC |
| Primer Seq. 3' |
aatctagaggtaccGAAACGGTGGCAGACCAGGGA |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 CAGCCTGGTC GTCAAATACG CCGACACGGA GAAGGAGCGA CAAATAAGGC GCATGCAGCA
0061 AATGGCCGGT CACATGAACC TGCTGAATCC GTTCGTCTTT AATCAGTTCA GTCCGTACGG
0121 CGCCTACGCC CAGCAACAGC AACAGGCCGC TCTGATGGCC GCCGCTGCCA CGGCACCCGG
0181 ATCCGCAGCC GCCTACATGA ACCCGATGGC GGCTCTGGCA ACGCAGATAC CTCATGGCCT
0241 AAACGGCACC GGCCAGCCCC CCTCGCTGCC GTCGCCGACC ATGCCCAACT TCAACATGGG
0301 CGCCAACACG CCCAACGGAC AGCCCGGCGG NNNNNCNGCC GCTGCTGCTG CGGCGNNTGC
0361 CGCGGACGGC GTCTTTCACG AACGGCATTC CACAAACGGC ATTCCCAGGA CATCCGCTGC
0421 ACTTGACTAT ACCGCCACAA GGTTTGCCAA ACGGGATGCT GCTACCCTGC AACATGCCTT
0481 CCCTGGTCTG CCACCGTTTC |
| in silico PCR Fragment |
0001 CAGCCTGGTC GTCAAATACG CCGACACGGA GAAGGAGCGA CAAATAAGGC GCATGCAGCA
0061 AATGGCCGGT CACATGAACC TGCTGAATCC GTTCGTCTTT AATCAGTTCA GTCCGTACGG
0121 CGCCTACGCC CAGCAACAGC AACAGGCCGC TCTGATGGCC GCCGCTGCCA CGGCACCCGG
0181 ATCCGCAGCC GCCTACATGA ACCCGATGGC GGCTCTGGCA ACGCAGATAC CTCATGGCCT
0241 AAACGGCACC GGCCAGCCCC CCTCGCTGCC GTCGCCGACC ATGCCCAACT TCAACATGGG
0301 CGCCAACACG CCCAACGGAC AGCCCGGCGG AGCGGCCGCC GCTGCTGCTG CGGCGGCTGC
0361 CGCGGACGGC GTCTTCACGA ACGGCATTCC ACAAACGGCA TTCCCAGGAC ATCCGCTGCA
0421 CTTGACTATA CCGCCACAAG GTTTGCCAAA CGGCGATGCT GCTACCCTGC AACATGCCTT
0481 CCCTGGTCTG CCACCGTTTC |
| Assemble Data |
10046Ra-5.IR full 1 CAGCCTGGTCGTCAAATACGCCGACACGGAGAAGGAGCGACAAATAAGGCGCATGCAGCA 60
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10046Ra-5.in silico 1 CAGCCTGGTCGTCAAATACGCCGACACGGAGAAGGAGCGACAAATAAGGCGCATGCAGCA 60
10046Ra-5.IR full 61 AATGGCCGGTCACATGAACCTGCTGAATCCGTTCGTCTTTAATCAGTTCAGTCCGTACGG 120
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10046Ra-5.in silico 61 AATGGCCGGTCACATGAACCTGCTGAATCCGTTCGTCTTTAATCAGTTCAGTCCGTACGG 120
10046Ra-5.IR full 121 CGCCTACGCCCAGCAACAGCAACAGGCCGCTCTGATGGCCGCCGCTGCCACGGCACCCGG 180
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10046Ra-5.in silico 121 CGCCTACGCCCAGCAACAGCAACAGGCCGCTCTGATGGCCGCCGCTGCCACGGCACCCGG 180
10046Ra-5.IR full 181 ATCCGCAGCCGCCTACATGAACCCGATGGCGGCTCTGGCAACGCAGATACCTCATGGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10046Ra-5.in silico 181 ATCCGCAGCCGCCTACATGAACCCGATGGCGGCTCTGGCAACGCAGATACCTCATGGCCT 240
10046Ra-5.IR full 241 AAACGGCACCGGCCAGCCCCCCTCGCTGCCGTCGCCGACCATGCCCAACTTCAACATGGG 300
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10046Ra-5.in silico 241 AAACGGCACCGGCCAGCCCCCCTCGCTGCCGTCGCCGACCATGCCCAACTTCAACATGGG 300
10046Ra-5.IR full 301 CGCCAACACGCCCAACGGACAGCCCGGCGGNNNNNCNGCCGCTGCTGCTGCGGCGNNTGC 360
|||||||||||||||||||||||||||||| | |||||||||||||||||| |||
10046Ra-5.in silico 301 CGCCAACACGCCCAACGGACAGCCCGGCGGAGCGGCCGCCGCTGCTGCTGCGGCGGCTGC 360
10046Ra-5.IR full 361 CGCGGACGGCGTCTTTCACGAACGGCATTCCACAAACGGCATTCCCAGGACATCCGCTGC 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
10046Ra-5.in silico 361 CGCGGACGGCGTCTT-CACGAACGGCATTCCACAAACGGCATTCCCAGGACATCCGCTGC 420
10046Ra-5.IR full 421 ACTTGACTATACCGCCACAAGGTTTGCCAAACGG-GATGCTGCTACCCTGCAACATGCCT 480
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10046Ra-5.in silico 421 ACTTGACTATACCGCCACAAGGTTTGCCAAACGGCGATGCTGCTACCCTGCAACATGCCT 480
10046Ra-5.IR full 481 TCCCTGGTCTGCCACCGTTTC 501
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10046Ra-5.in silico 481 TCCCTGGTCTGCCACCGTTTC 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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