Transcription Factor Profiling of Escherichia coli
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TF-binding sites
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TF-binding sites(bar chart)
- MG1655(U00096.2)
=> Genomic SELEX screening system
go to :
>>W3110
,
>>MG1655(U00096.3)
Bar chart
Heat map
Select TF(s) to show its
binding sites on the genome
A
A:1
ArcA
ArgP
ArgPArg
ArgPLys
ArgR
AscG
AsnC
B
B:1
BasR
BasRAcP
BetI
BetICholine
BtsR
C
C:1
CRP
CRPnoncAMP
CbpB
CecR
CitB
Cra
CraFruBP
CreBP
CsqR
CsuR
CusR
CusRAcP
CynR
CynRcyanate
CytR
D
D:1
Dan
DcuRP
DecR
DeoR
DeoT
DhaR
DicA
Dps
DsdC
DsdCSer
E
E:1
EbgR
EvgA
EvgAP
ExuR
F
F:1
Fis
FlhA
FlhAformate
FlhDC
FrlR
Fur
G
G:1
GalR
GgaR_ChIP
GusR
H
H:1
HNS
HNSHha
HU
HcaR
Hfq
HipB
HprR
I
I:1
IHF
IclR
IlvY
IlvYhydroxybutyrate
K
K:1
KdpE
KdpEP
L
L:1
LacI
LctR
LctRlactate
LeuO
LldR
LrhA
Lrp
Lrpleucine
M
M:1
MalI
MalImaltose
MarR
MarRsalicylate
Mlc
MlrA
MntR
MntRMn
ModE
ModEMo
MrlA
N
N:1
NadR
NadRNMN
NanR
NanRnana
NhaR
NhaRNa
NimR
NorR
NtrC
O
O:1
OmpR
OxyR
P
P:1
PdhR
PdhRpyr
PepA
PgrR
PhnF
PhoB
PlaR
PspF
PutA
PutAProline
PyrR
PyrRAcP
Q
Q:1
QseA
QseAPHBA
QseB
QseBP
R
R:1
RbsR
RbsRribose
RcdA
RcsB
RpiR
RpoD
RpoE
RpoF
RpoH
RpoN
RpoNNtrC
RpoS
RpoZ_ChIP
RspR
RutR
S
S:1
SdiA
SdiAA
SdiAF
SdiAK
SdiAOC
SfsA
SfsAmaltose
SlmA
SoxRDTT
SoxRFe
SoxSDTT
SoxSFe
SrlR
SrsR
StpA
T
T:1
TorR
TorRP
TreR
TreRtrehalose
U
U:1
UlaR
UlaRP
UvrY
UvrYP
UxuRglucronate
uxuR
X
X:1
XynR
Y
Y:1
YagI
YahA
YahAcdiGMP
YahB
YbaO
YbiH
YcaN
YcfQ
YciT
YdcN
YdfH
YeaM
YedW
YegW
YfaX
YfeR
YfgA
YfhH
YgfB
YgfI
Y:2
YheR
YiaJ
YiaU
YidZ
YifA
YihW
YijO
YjgJ
YjiE
YkgA
YkgD
YneJ
YnfL
YpdB
YpdBP
YqhC
Z
Z:1
ZraR
Zur
ZurZn
selected TF
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Position(BP)
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