#=GENOME_DIFF	1.0
#=CREATED	16:34:29 10 Oct 2025
#=PROGRAM	breseq 0.39.0 
#=COMMAND	breseq -j 8 -o /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_run15_rmdup_trimmng-adaptors-polyG/ME8829_S23_R1R2_RMDUP -r /ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8829_S23_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8829_S23_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=REFSEQ	/ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8829_S23_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8829_S23_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=CONVERTED-BASES	430489653
#=CONVERTED-READS	1461963
#=INPUT-BASES	430588403
#=INPUT-READS	1462302
#=MAPPED-BASES	416341562
#=MAPPED-READS	1414763
DEL	1	53,58	NC_000913	257908	776
SNP	2	12	NC_000913	803662	A
DEL	3	54,74	NC_000913	1299499	1199
SNP	4	29	NC_000913	1905761	A
DEL	5	55,77	NC_000913	1978503	776
DEL	6	30,31	NC_000913	2173363	2
INS	7	43	NC_000913	3560455	G
INS	8	50,51	NC_000913	4296381	GC
RA	9	.	NC_000913	58065	0	C	A	bias_e_value=0.263218	bias_p_value=5.67079e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=120.6	fisher_strand_p_value=2.73736e-09	frequency=3.571e-01	ks_quality_p_value=1	major_base=C	major_cov=21/33	major_frequency=6.429e-01	minor_base=A	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=3.571e-01	polymorphism_score=16.1	prediction=polymorphism	ref_cov=21/33	total_cov=51/33
RA	10	.	NC_000913	141849	0	C	A	bias_e_value=0.0018685	bias_p_value=4.0255e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=231.9	fisher_strand_p_value=1.55503e-11	frequency=2.479e-01	ks_quality_p_value=1	major_base=C	major_cov=31/60	major_frequency=7.521e-01	minor_base=A	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=2.479e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=31/60	total_cov=61/60
RA	11	.	NC_000913	710830	0	G	T	bias_e_value=12.1715	bias_p_value=2.62224e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=222.4	fisher_strand_p_value=1.57352e-07	frequency=2.162e-01	ks_quality_p_value=1	major_base=G	major_cov=48/39	major_frequency=7.838e-01	minor_base=T	minor_cov=0/24	new_cov=0/24	polymorphism_frequency=2.162e-01	polymorphism_score=11.6	prediction=polymorphism	ref_cov=48/39	total_cov=48/63
RA	12	.	NC_000913	803662	0	C	A	bias_e_value=3247010	bias_p_value=0.699537	consensus_score=475.1	fisher_strand_p_value=0.333333	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=41/84	major_frequency=9.921e-01	minor_base=G	minor_cov=1/0	new_cov=41/84	polymorphism_frequency=9.921e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/84
RA	13	.	NC_000913	847955	0	G	A	bias_e_value=1.003e-08	bias_p_value=2.16087e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=144.7	fisher_strand_p_value=5.6248e-17	frequency=3.803e-01	ks_quality_p_value=1	major_base=G	major_cov=60/28	major_frequency=6.197e-01	minor_base=A	minor_cov=1/53	new_cov=1/53	polymorphism_frequency=3.803e-01	polymorphism_score=79.2	prediction=polymorphism	ref_cov=60/28	total_cov=61/82
RA	14	.	NC_000913	848028	0	G	T	bias_e_value=1.17547	bias_p_value=2.53245e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=287.6	fisher_strand_p_value=1.32307e-08	frequency=2.057e-01	ks_quality_p_value=1	major_base=G	major_cov=60/52	major_frequency=7.943e-01	minor_base=T	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=2.057e-01	polymorphism_score=11.9	prediction=polymorphism	ref_cov=60/52	total_cov=60/81
RA	15	.	NC_000913	1097118	0	C	A	bias_e_value=4462400	bias_p_value=0.961383	consensus_reject=FREQUENCY_CUTOFF	consensus_score=69.2	fisher_strand_p_value=1	frequency=2.712e-01	ks_quality_p_value=0.735284	major_base=C	major_cov=19/24	major_frequency=7.288e-01	minor_base=A	minor_cov=7/9	new_cov=7/9	polymorphism_frequency=2.712e-01	polymorphism_score=40.5	prediction=polymorphism	ref_cov=19/24	total_cov=26/33
RA	16	.	NC_000913	1286831	0	T	A	bias_e_value=3375940	bias_p_value=0.727314	consensus_reject=FREQUENCY_CUTOFF	consensus_score=140.9	fisher_strand_p_value=0.378123	frequency=2.059e-01	ks_quality_p_value=0.95083	major_base=T	major_cov=23/31	major_frequency=7.941e-01	minor_base=A	minor_cov=8/6	new_cov=8/6	polymorphism_frequency=2.059e-01	polymorphism_score=45.8	prediction=polymorphism	ref_cov=23/31	total_cov=34/38
RA	17	.	NC_000913	1286846	0	G	A	bias_e_value=2672020	bias_p_value=0.575662	consensus_reject=FREQUENCY_CUTOFF	consensus_score=147.2	fisher_strand_p_value=0.235236	frequency=2.029e-01	ks_quality_p_value=1	major_base=G	major_cov=21/34	major_frequency=7.971e-01	minor_base=A	minor_cov=8/6	new_cov=8/6	polymorphism_frequency=2.029e-01	polymorphism_score=27.1	prediction=polymorphism	ref_cov=21/34	total_cov=29/40
RA	18	.	NC_000913	1286870	0	C	A	bias_e_value=1391150	bias_p_value=0.29971	consensus_reject=FREQUENCY_CUTOFF	consensus_score=125.9	fisher_strand_p_value=0.0871102	frequency=2.462e-01	ks_quality_p_value=1	major_base=C	major_cov=18/31	major_frequency=7.538e-01	minor_base=A	minor_cov=10/6	new_cov=10/6	polymorphism_frequency=2.462e-01	polymorphism_score=23.7	prediction=polymorphism	ref_cov=18/31	total_cov=28/37
RA	19	.	NC_000913	1286874	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_reject=FREQUENCY_CUTOFF	consensus_score=133.2	fisher_strand_p_value=1	frequency=2.000e-01	ks_quality_p_value=1	major_base=G	major_cov=22/30	major_frequency=8.000e-01	minor_base=A	minor_cov=6/7	new_cov=6/7	polymorphism_frequency=2.000e-01	polymorphism_score=27.6	prediction=polymorphism	ref_cov=22/30	total_cov=28/37
RA	20	.	NC_000913	1351463	0	C	A	bias_e_value=226.365	bias_p_value=4.87683e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=137.7	fisher_strand_p_value=3.6035e-06	frequency=2.967e-01	ks_quality_p_value=1	major_base=C	major_cov=35/29	major_frequency=7.033e-01	minor_base=A	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.967e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=35/29	total_cov=62/29
RA	21	.	NC_000913	1466418	0	A	G	bias_e_value=936212	bias_p_value=0.201698	consensus_reject=FREQUENCY_CUTOFF	consensus_score=135.3	fisher_strand_p_value=0.0506394	frequency=2.698e-01	ks_quality_p_value=1	major_base=A	major_cov=22/24	major_frequency=7.302e-01	minor_base=G	minor_cov=13/4	new_cov=13/4	polymorphism_frequency=2.698e-01	polymorphism_score=33.4	prediction=polymorphism	ref_cov=22/24	total_cov=35/28
RA	22	.	NC_000913	1466419	0	A	C	bias_e_value=3193190	bias_p_value=0.687943	consensus_reject=FREQUENCY_CUTOFF	consensus_score=124.8	fisher_strand_p_value=0.353448	frequency=2.063e-01	ks_quality_p_value=0.913652	major_base=A	major_cov=26/24	major_frequency=7.937e-01	minor_base=C	minor_cov=9/4	new_cov=9/4	polymorphism_frequency=2.063e-01	polymorphism_score=30.3	prediction=polymorphism	ref_cov=26/24	total_cov=35/28
RA	23	.	NC_000913	1466432	0	A	G	bias_e_value=3559470	bias_p_value=0.766854	consensus_reject=FREQUENCY_CUTOFF	consensus_score=119.3	fisher_strand_p_value=0.400368	frequency=2.857e-01	ks_quality_p_value=1	major_base=A	major_cov=23/22	major_frequency=7.143e-01	minor_base=G	minor_cov=12/6	new_cov=12/6	polymorphism_frequency=2.857e-01	polymorphism_score=36.5	prediction=polymorphism	ref_cov=23/22	total_cov=35/28
RA	24	.	NC_000913	1466435	0	A	G	bias_e_value=3346820	bias_p_value=0.721041	consensus_reject=FREQUENCY_CUTOFF	consensus_score=146.5	fisher_strand_p_value=0.353448	frequency=2.063e-01	ks_quality_p_value=1	major_base=A	major_cov=26/24	major_frequency=7.937e-01	minor_base=G	minor_cov=9/4	new_cov=9/4	polymorphism_frequency=2.063e-01	polymorphism_score=24.2	prediction=polymorphism	ref_cov=26/24	total_cov=35/28
RA	25	.	NC_000913	1466438	0	T	G	bias_e_value=3622340	bias_p_value=0.780398	consensus_reject=FREQUENCY_CUTOFF	consensus_score=98.4	fisher_strand_p_value=0.415473	frequency=3.175e-01	ks_quality_p_value=1	major_base=T	major_cov=22/21	major_frequency=6.825e-01	minor_base=G	minor_cov=13/7	new_cov=13/7	polymorphism_frequency=3.175e-01	polymorphism_score=41.4	prediction=polymorphism	ref_cov=22/21	total_cov=35/28
RA	26	.	NC_000913	1502770	0	T	C	bias_e_value=4.85707	bias_p_value=1.04641e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=192.6	fisher_strand_p_value=5.93192e-08	frequency=2.414e-01	ks_quality_p_value=1	major_base=T	major_cov=46/42	major_frequency=7.586e-01	minor_base=C	minor_cov=0/28	new_cov=0/28	polymorphism_frequency=2.414e-01	polymorphism_score=26.9	prediction=polymorphism	ref_cov=46/42	total_cov=46/70
RA	27	.	NC_000913	1502772	0	G	A	bias_e_value=2.10953	bias_p_value=4.54478e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=179.9	fisher_strand_p_value=2.45357e-08	frequency=2.609e-01	ks_quality_p_value=1	major_base=G	major_cov=45/40	major_frequency=7.391e-01	minor_base=A	minor_cov=0/30	new_cov=0/30	polymorphism_frequency=2.609e-01	polymorphism_score=27.3	prediction=polymorphism	ref_cov=45/40	total_cov=45/72
RA	28	.	NC_000913	1611507	0	G	T	bias_e_value=34.6449	bias_p_value=7.46392e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=117.2	fisher_strand_p_value=4.80012e-07	frequency=3.256e-01	ks_quality_p_value=1	major_base=G	major_cov=29/29	major_frequency=6.744e-01	minor_base=T	minor_cov=0/28	new_cov=0/28	polymorphism_frequency=3.256e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=29/29	total_cov=29/57
RA	29	.	NC_000913	1905761	0	G	A	consensus_score=221.7	frequency=1	major_base=A	major_cov=41/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/22
RA	30	.	NC_000913	2173363	0	C	.	consensus_score=279.8	frequency=1	major_base=.	major_cov=32/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/26
RA	31	.	NC_000913	2173364	0	C	.	consensus_score=279.8	frequency=1	major_base=.	major_cov=32/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/26
RA	32	.	NC_000913	2178156	0	C	A	bias_e_value=0.0218136	bias_p_value=4.69952e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=200.9	fisher_strand_p_value=2.01477e-10	frequency=2.673e-01	ks_quality_p_value=1	major_base=C	major_cov=25/49	major_frequency=7.327e-01	minor_base=A	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=2.673e-01	polymorphism_score=14.4	prediction=polymorphism	ref_cov=25/49	total_cov=52/49
RA	33	.	NC_000913	2270138	0	C	A	bias_e_value=0.118076	bias_p_value=2.54383e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=219.8	fisher_strand_p_value=1.18001e-09	frequency=2.743e-01	ks_quality_p_value=1	major_base=C	major_cov=35/47	major_frequency=7.257e-01	minor_base=A	minor_cov=31/0	new_cov=31/0	polymorphism_frequency=2.743e-01	polymorphism_score=11.7	prediction=polymorphism	ref_cov=35/47	total_cov=66/47
RA	34	.	NC_000913	2288418	0	G	T	bias_e_value=0.000455118	bias_p_value=9.80508e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=237.4	fisher_strand_p_value=3.58446e-12	frequency=2.609e-01	ks_quality_p_value=1	major_base=G	major_cov=58/27	major_frequency=7.391e-01	minor_base=T	minor_cov=0/30	new_cov=0/30	polymorphism_frequency=2.609e-01	polymorphism_score=13.9	prediction=polymorphism	ref_cov=58/27	total_cov=58/57
RA	35	.	NC_000913	2326713	0	C	A	bias_e_value=0.0203417	bias_p_value=4.38242e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=183.1	fisher_strand_p_value=1.87296e-10	frequency=2.941e-01	ks_quality_p_value=1	major_base=C	major_cov=26/46	major_frequency=7.059e-01	minor_base=A	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=2.941e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=26/46	total_cov=56/46
RA	36	.	NC_000913	2412396	0	C	A	bias_e_value=0.56394	bias_p_value=1.21495e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=196.5	fisher_strand_p_value=6.10075e-09	frequency=2.632e-01	ks_quality_p_value=1	major_base=C	major_cov=26/44	major_frequency=7.368e-01	minor_base=A	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=2.632e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=26/44	total_cov=51/44
RA	37	.	NC_000913	2465016	0	C	A	bias_e_value=0.118889	bias_p_value=2.56135e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=178.2	fisher_strand_p_value=1.18853e-09	frequency=3.208e-01	ks_quality_p_value=1	major_base=C	major_cov=32/40	major_frequency=6.792e-01	minor_base=A	minor_cov=34/0	new_cov=34/0	polymorphism_frequency=3.208e-01	polymorphism_score=13.7	prediction=polymorphism	ref_cov=32/40	total_cov=66/40
RA	38	.	NC_000913	2477265	0	A	C	bias_e_value=8.30836e-06	bias_p_value=1.78996e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=164.1	fisher_strand_p_value=5.68263e-14	frequency=3.000e-01	ks_quality_p_value=1	major_base=A	major_cov=12/51	major_frequency=7.000e-01	minor_base=C	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=3.000e-01	polymorphism_score=16.1	prediction=polymorphism	ref_cov=12/51	total_cov=39/51
RA	39	.	NC_000913	2767445	0	C	A	bias_e_value=2.28867e-07	bias_p_value=4.93072e-14	consensus_reject=FREQUENCY_CUTOFF	consensus_score=181.8	fisher_strand_p_value=1.4007e-15	frequency=3.086e-01	ks_quality_p_value=1	major_base=C	major_cov=6/50	major_frequency=6.914e-01	minor_base=A	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=3.086e-01	polymorphism_score=14.3	prediction=polymorphism	ref_cov=6/50	total_cov=31/50
RA	40	.	NC_000913	2990480	0	C	A	bias_e_value=0.000124405	bias_p_value=2.68019e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=263.9	fisher_strand_p_value=9.33884e-13	frequency=2.838e-01	ks_quality_p_value=1	major_base=C	major_cov=45/61	major_frequency=7.162e-01	minor_base=A	minor_cov=42/0	new_cov=42/0	polymorphism_frequency=2.838e-01	polymorphism_score=15.6	prediction=polymorphism	ref_cov=45/61	total_cov=87/61
RA	41	.	NC_000913	3054886	0	G	T	bias_e_value=0.00610926	bias_p_value=1.31618e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=181.4	fisher_strand_p_value=5.33873e-11	frequency=2.471e-01	ks_quality_p_value=1	major_base=G	major_cov=14/50	major_frequency=7.529e-01	minor_base=T	minor_cov=21/0	new_cov=21/0	polymorphism_frequency=2.471e-01	polymorphism_score=13.4	prediction=polymorphism	ref_cov=14/50	total_cov=35/50
RA	42	.	NC_000913	3433680	0	C	A	bias_e_value=32.4209	bias_p_value=6.98477e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=208.6	fisher_strand_p_value=4.47158e-07	frequency=2.330e-01	ks_quality_p_value=1	major_base=C	major_cov=37/42	major_frequency=7.670e-01	minor_base=A	minor_cov=24/0	new_cov=24/0	polymorphism_frequency=2.330e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=37/42	total_cov=61/42
RA	43	.	NC_000913	3560455	1	.	G	bias_e_value=3579290	bias_p_value=0.771124	consensus_score=293.5	fisher_strand_p_value=0.405063	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=31/47	major_frequency=9.873e-01	minor_base=A	minor_cov=1/0	new_cov=31/47	polymorphism_frequency=9.873e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/47
RA	44	.	NC_000913	3741871	0	G	T	bias_e_value=0.00392121	bias_p_value=8.44787e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=184.1	fisher_strand_p_value=3.36362e-11	frequency=3.390e-01	ks_quality_p_value=1	major_base=G	major_cov=44/34	major_frequency=6.610e-01	minor_base=T	minor_cov=0/40	new_cov=0/40	polymorphism_frequency=3.390e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=44/34	total_cov=44/74
RA	45	.	NC_000913	3768435	0	C	A	bias_e_value=4.61229e-08	bias_p_value=9.93674e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=328.9	fisher_strand_p_value=2.69658e-16	frequency=2.750e-01	ks_quality_p_value=1	major_base=C	major_cov=39/77	major_frequency=7.250e-01	minor_base=A	minor_cov=44/0	new_cov=44/0	polymorphism_frequency=2.750e-01	polymorphism_score=13.5	prediction=polymorphism	ref_cov=39/77	total_cov=83/77
RA	46	.	NC_000913	3911533	0	C	A	bias_e_value=0.000708647	bias_p_value=1.52671e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=220.1	fisher_strand_p_value=5.67664e-12	frequency=3.235e-01	ks_quality_p_value=1	major_base=C	major_cov=41/51	major_frequency=6.765e-01	minor_base=A	minor_cov=44/0	new_cov=44/0	polymorphism_frequency=3.235e-01	polymorphism_score=13.8	prediction=polymorphism	ref_cov=41/51	total_cov=85/51
RA	47	.	NC_000913	4074572	0	C	A	bias_e_value=0.0355272	bias_p_value=7.654e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=195.7	fisher_strand_p_value=3.35474e-10	frequency=2.946e-01	ks_quality_p_value=1	major_base=C	major_cov=33/46	major_frequency=7.054e-01	minor_base=A	minor_cov=33/0	new_cov=33/0	polymorphism_frequency=2.946e-01	polymorphism_score=11.5	prediction=polymorphism	ref_cov=33/46	total_cov=66/46
RA	48	.	NC_000913	4261040	0	C	A	bias_e_value=3.86657e-05	bias_p_value=8.33016e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=257.9	fisher_strand_p_value=2.78514e-13	frequency=2.756e-01	ks_quality_p_value=1	major_base=C	major_cov=31/61	major_frequency=7.244e-01	minor_base=A	minor_cov=35/0	new_cov=35/0	polymorphism_frequency=2.756e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=31/61	total_cov=66/61
RA	49	.	NC_000913	4296268	0	T	C	bias_e_value=2973270	bias_p_value=0.640562	consensus_reject=FREQUENCY_CUTOFF	consensus_score=69.6	fisher_strand_p_value=0.416124	frequency=2.308e-01	ks_quality_p_value=0.680712	major_base=T	major_cov=22/8	major_frequency=7.692e-01	minor_base=C	minor_cov=5/4	new_cov=5/4	polymorphism_frequency=2.308e-01	polymorphism_score=22.5	prediction=polymorphism	ref_cov=22/8	total_cov=28/12
RA	50	.	NC_000913	4296380	1	.	C	bias_e_value=4105840	bias_p_value=0.884564	consensus_score=214.3	fisher_strand_p_value=0.564453	frequency=1	ks_quality_p_value=0.991701	major_base=C	major_cov=44/16	major_frequency=9.375e-01	minor_base=.	minor_cov=4/0	new_cov=44/16	polymorphism_frequency=9.375e-01	polymorphism_score=8.2	prediction=consensus	ref_cov=4/0	total_cov=50/16
RA	51	.	NC_000913	4296380	2	.	G	bias_e_value=4119500	bias_p_value=0.887506	consensus_score=228.3	fisher_strand_p_value=0.56488	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=46/16	major_frequency=9.394e-01	minor_base=.	minor_cov=4/0	new_cov=46/16	polymorphism_frequency=9.394e-01	polymorphism_score=7.8	prediction=consensus	ref_cov=4/0	total_cov=50/16
RA	52	.	NC_000913	4360965	0	C	A	bias_e_value=8.77253e-07	bias_p_value=1.88996e-13	consensus_reject=FREQUENCY_CUTOFF	consensus_score=345.8	fisher_strand_p_value=5.58861e-15	frequency=2.158e-01	ks_quality_p_value=1	major_base=C	major_cov=27/82	major_frequency=7.842e-01	minor_base=A	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=2.158e-01	polymorphism_score=10.0	prediction=polymorphism	ref_cov=27/82	total_cov=57/82
MC	53	.	NC_000913	257908	258683	767	0	left_inside_cov=0	left_outside_cov=130	right_inside_cov=1	right_outside_cov=131
MC	54	.	NC_000913	1299499	1300697	1198	0	left_inside_cov=0	left_outside_cov=147	right_inside_cov=1	right_outside_cov=149
MC	55	.	NC_000913	1978503	1979278	767	0	left_inside_cov=0	left_outside_cov=103	right_inside_cov=4	right_outside_cov=105
MC	56	.	NC_000913	3423761	3424502	472	263	left_inside_cov=27	left_outside_cov=29	right_inside_cov=26	right_outside_cov=28
JC	57	.	NC_000913	1	1	NC_000913	4641652	-1	0	alignment_overlap=0	coverage_minus=72	coverage_plus=61	flanking_left=300	flanking_right=300	frequency=1	ignore=CIRCULAR_CHROMOSOME	junction_possible_overlap_registers=293	key=NC_000913__1__1__NC_000913__4641652__-1__0____300__300__0__0	max_left=297	max_left_minus=297	max_left_plus=267	max_min_left=148	max_min_left_minus=148	max_min_left_plus=148	max_min_right=144	max_min_right_minus=142	max_min_right_plus=144	max_pos_hash_score=586	max_right=287	max_right_minus=287	max_right_plus=284	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.56	new_junction_read_count=140	polymorphism_frequency=1.000e+00	pos_hash_score=75	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=293	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=133
JC	58	.	NC_000913	257907	-1	NC_000913	258684	1	0	alignment_overlap=8	coverage_minus=61	coverage_plus=66	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=285	key=NC_000913__257907__-1__NC_000913__258676__1__8____300__300__0__0	max_left=288	max_left_minus=288	max_left_plus=282	max_min_left=137	max_min_left_minus=100	max_min_left_plus=137	max_min_right=144	max_min_right_minus=144	max_min_right_plus=144	max_pos_hash_score=570	max_right=283	max_right_minus=283	max_right_plus=275	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.49	new_junction_read_count=130	polymorphism_frequency=1.000e+00	pos_hash_score=71	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=8	side_1_possible_overlap_registers=293	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=127
JC	59	.	NC_000913	542498	-1	NC_000913	542634	1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=3.749e-02	junction_possible_overlap_registers=286	key=NC_000913__542498__-1__NC_000913__542627__1__7____300__300__0__0	max_left=249	max_left_minus=249	max_left_plus=199	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=109	max_min_right_minus=109	max_min_right_plus=92	max_pos_hash_score=572	max_right=109	max_right_minus=109	max_right_plus=92	neg_log10_pos_hash_p_value=8.2	new_junction_coverage=0.03	new_junction_read_count=3	polymorphism_frequency=3.749e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.91	side_1_overlap=7	side_1_possible_overlap_registers=293	side_1_read_count=82	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.84	side_2_overlap=0	side_2_possible_overlap_registers=286	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=3
JC	60	.	NC_000913	542503	-1	NC_000913	542639	1	0	alignment_overlap=4	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.942e-02	junction_possible_overlap_registers=289	key=NC_000913__542503__-1__NC_000913__542635__1__4____300__300__0__0	max_left=260	max_left_minus=260	max_left_plus=198	max_min_left=45	max_min_left_minus=0	max_min_left_plus=45	max_min_right=108	max_min_right_minus=108	max_min_right_plus=98	max_pos_hash_score=578	max_right=251	max_right_minus=108	max_right_plus=251	neg_log10_pos_hash_p_value=7.7	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=4.942e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.91	side_1_overlap=4	side_1_possible_overlap_registers=293	side_1_read_count=82	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.82	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=73	side_2_redundant=0	total_non_overlap_reads=4
JC	61	.	NC_000913	696506	-1	NC_000913	697057	1	-45	alignment_overlap=-45	coverage_minus=2	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=6.720e-02	junction_possible_overlap_registers=248	key=NC_000913__696506__-1__NC_000913__697057__1__-45__AAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATT__300__300__0__0	max_left=192	max_left_minus=71	max_left_plus=192	max_min_left=71	max_min_left_minus=71	max_min_left_plus=71	max_min_right=73	max_min_right_minus=0	max_min_right_plus=73	max_pos_hash_score=496	max_right=133	max_right_minus=133	max_right_plus=133	neg_log10_pos_hash_p_value=6.4	new_junction_coverage=0.07	new_junction_read_count=5	polymorphism_frequency=6.720e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.90	side_1_overlap=0	side_1_possible_overlap_registers=293	side_1_read_count=81	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.92	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=83	side_2_redundant=0	total_non_overlap_reads=5	unique_read_sequence=AAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATT
JC	62	.	NC_000913	696741	-1	NC_000913	697135	1	0	alignment_overlap=78	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=8.714e-02	junction_possible_overlap_registers=215	key=NC_000913__696741__-1__NC_000913__697057__1__78____300__300__0__0	max_left=116	max_left_minus=116	max_left_plus=116	max_min_left=30	max_min_left_minus=30	max_min_left_plus=30	max_min_right=55	max_min_right_minus=55	max_min_right_plus=55	max_pos_hash_score=430	max_right=121	max_right_minus=121	max_right_plus=121	neg_log10_pos_hash_p_value=5.7	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.714e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.68	side_1_overlap=78	side_1_possible_overlap_registers=293	side_1_read_count=61	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.91	side_2_overlap=0	side_2_possible_overlap_registers=215	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=5
JC	63	.	NC_000913	721951	-1	NC_000913	722313	1	0	alignment_overlap=12	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=6.187e-02	junction_possible_overlap_registers=281	key=NC_000913__721951__-1__NC_000913__722301__1__12____300__300__0__0	max_left=120	max_left_minus=120	max_left_plus=120	max_min_left=70	max_min_left_minus=70	max_min_left_plus=70	max_min_right=9	max_min_right_minus=9	max_min_right_plus=9	max_pos_hash_score=562	max_right=187	max_right_minus=187	max_right_plus=187	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=6.187e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.91	side_1_overlap=12	side_1_possible_overlap_registers=293	side_1_read_count=82	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.85	side_2_overlap=0	side_2_possible_overlap_registers=281	side_2_read_count=73	side_2_redundant=0	total_non_overlap_reads=5
JC	64	.	NC_000913	732042	-1	NC_000913	732685	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=7.546e-02	junction_possible_overlap_registers=282	key=NC_000913__732042__-1__NC_000913__732674__1__11____300__300__0__0	max_left=145	max_left_minus=145	max_left_plus=145	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=53	max_min_right_minus=53	max_min_right_plus=53	max_pos_hash_score=564	max_right=53	max_right_minus=53	max_right_plus=53	neg_log10_pos_hash_p_value=7.6	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=7.546e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.59	side_1_overlap=11	side_1_possible_overlap_registers=293	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.54	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=47	side_2_redundant=0	total_non_overlap_reads=4
JC	65	.	NC_000913	732042	-1	NC_000913	734556	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=7.407e-02	junction_possible_overlap_registers=282	key=NC_000913__732042__-1__NC_000913__734545__1__11____300__300__0__0	max_left=145	max_left_minus=145	max_left_plus=145	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=53	max_min_right_minus=53	max_min_right_plus=53	max_pos_hash_score=564	max_right=53	max_right_minus=53	max_right_plus=53	neg_log10_pos_hash_p_value=7.6	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=7.407e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.59	side_1_overlap=11	side_1_possible_overlap_registers=293	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.57	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=49	side_2_redundant=0	total_non_overlap_reads=4
JC	66	.	NC_000913	732239	-1	NC_000913	3622029	1	0	alignment_overlap=12	coverage_minus=5	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=2.043e-01	junction_possible_overlap_registers=281	key=NC_000913__732239__-1__NC_000913__3622017__1__12____300__300__0__0	max_left=215	max_left_minus=215	max_left_plus=215	max_min_left=140	max_min_left_minus=140	max_min_left_plus=114	max_min_right=83	max_min_right_minus=83	max_min_right_plus=49	max_pos_hash_score=562	max_right=270	max_right_minus=209	max_right_plus=270	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.10	new_junction_read_count=9	polymorphism_frequency=2.043e-01	pos_hash_score=8	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.79	side_1_overlap=12	side_1_possible_overlap_registers=293	side_1_read_count=71	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=281	side_2_read_count=2	side_2_redundant=0	total_non_overlap_reads=9
JC	67	.	NC_000913	732239	-1	NC_000913	3765020	1	0	alignment_overlap=12	coverage_minus=5	coverage_plus=5	flanking_left=300	flanking_right=300	frequency=2.172e-01	junction_possible_overlap_registers=281	key=NC_000913__732239__-1__NC_000913__3765008__1__12____300__300__0__0	max_left=215	max_left_minus=215	max_left_plus=215	max_min_left=140	max_min_left_minus=140	max_min_left_plus=114	max_min_right=83	max_min_right_minus=83	max_min_right_plus=49	max_pos_hash_score=562	max_right=285	max_right_minus=209	max_right_plus=285	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.12	new_junction_read_count=10	polymorphism_frequency=2.172e-01	pos_hash_score=9	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.79	side_1_overlap=12	side_1_possible_overlap_registers=293	side_1_read_count=71	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=281	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=10
JC	68	.	NC_000913	781282	-1	NC_000913	781785	1	-16	alignment_overlap=-16	coverage_minus=4	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=8.145e-02	junction_possible_overlap_registers=277	key=NC_000913__781282__-1__NC_000913__781785__1__-16__AAGGGCGAGACGAAGT__300__300__0__0	max_left=186	max_left_minus=186	max_left_plus=27	max_min_left=27	max_min_left_minus=27	max_min_left_plus=27	max_min_right=24	max_min_right_minus=24	max_min_right_plus=0	max_pos_hash_score=554	max_right=114	max_right_minus=114	max_right_plus=114	neg_log10_pos_hash_p_value=6.9	new_junction_coverage=0.08	new_junction_read_count=7	polymorphism_frequency=8.145e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.88	side_1_overlap=0	side_1_possible_overlap_registers=293	side_1_read_count=79	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.98	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=88	side_2_redundant=0	total_non_overlap_reads=6	unique_read_sequence=AAGGGCGAGACGAAGT
JC	69	.	NC_000913	1207790	1	NC_000913	1209619	1	0	alignment_overlap=16	coverage_minus=36	coverage_plus=29	flanking_left=300	flanking_right=300	frequency=6.381e-01	junction_possible_overlap_registers=277	key=NC_000913__1207790__1__NC_000913__1209603__1__16____300__300__0__0	max_left=281	max_left_minus=281	max_left_plus=268	max_min_left=139	max_min_left_minus=111	max_min_left_plus=139	max_min_right=140	max_min_right_minus=135	max_min_right_plus=140	max_pos_hash_score=554	max_right=282	max_right_minus=250	max_right_plus=282	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.77	new_junction_read_count=65	polymorphism_frequency=6.381e-01	pos_hash_score=48	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.26	side_1_overlap=16	side_1_possible_overlap_registers=293	side_1_read_count=23	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.61	side_2_overlap=0	side_2_possible_overlap_registers=277	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=65
JC	70	.	NC_000913	1207805	-1	NC_000913	1209602	-1	0	alignment_overlap=16	coverage_minus=29	coverage_plus=19	flanking_left=300	flanking_right=300	frequency=5.675e-01	junction_possible_overlap_registers=277	key=NC_000913__1207805__-1__NC_000913__1209618__-1__16____300__300__0__0	max_left=282	max_left_minus=282	max_left_plus=276	max_min_left=136	max_min_left_minus=136	max_min_left_plus=92	max_min_right=142	max_min_right_minus=142	max_min_right_plus=123	max_pos_hash_score=554	max_right=281	max_right_minus=281	max_right_plus=249	neg_log10_pos_hash_p_value=1.7	new_junction_coverage=0.58	new_junction_read_count=49	polymorphism_frequency=5.675e-01	pos_hash_score=28	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.27	side_1_overlap=16	side_1_possible_overlap_registers=293	side_1_read_count=24	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.61	side_2_overlap=0	side_2_possible_overlap_registers=277	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=48
JC	71	.	NC_000913	1286906	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=5	coverage_plus=5	flanking_left=300	flanking_right=300	frequency=1.503e-01	junction_possible_overlap_registers=273	key=NC_000913__1286906__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=275	max_left_minus=263	max_left_plus=275	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=67	max_min_right_minus=67	max_min_right_plus=15	max_pos_hash_score=546	max_right=276	max_right_minus=67	max_right_plus=276	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.12	new_junction_read_count=10	polymorphism_frequency=1.503e-01	pos_hash_score=9	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.63	side_1_overlap=20	side_1_possible_overlap_registers=293	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.72	side_2_overlap=0	side_2_possible_overlap_registers=273	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=10
JC	72	.	NC_000913	1287084	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=6	coverage_plus=5	flanking_left=300	flanking_right=300	frequency=1.785e-01	junction_possible_overlap_registers=273	key=NC_000913__1287084__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=242	max_left_minus=242	max_left_plus=127	max_min_left=127	max_min_left_minus=74	max_min_left_plus=127	max_min_right=121	max_min_right_minus=121	max_min_right_plus=0	max_pos_hash_score=546	max_right=276	max_right_minus=233	max_right_plus=276	neg_log10_pos_hash_p_value=5.3	new_junction_coverage=0.16	new_junction_read_count=13	polymorphism_frequency=1.785e-01	pos_hash_score=9	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.71	side_1_overlap=20	side_1_possible_overlap_registers=293	side_1_read_count=64	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.72	side_2_overlap=0	side_2_possible_overlap_registers=273	side_2_read_count=60	side_2_redundant=0	total_non_overlap_reads=11
JC	73	.	NC_000913	1287262	-1	NC_000913	1287382	1	0	alignment_overlap=21	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=7.339e-02	junction_possible_overlap_registers=272	key=NC_000913__1287262__-1__NC_000913__1287361__1__21____300__300__0__0	max_left=147	max_left_minus=147	max_left_plus=147	max_min_left=48	max_min_left_minus=48	max_min_left_plus=48	max_min_right=104	max_min_right_minus=104	max_min_right_plus=104	max_pos_hash_score=544	max_right=233	max_right_minus=233	max_right_plus=139	neg_log10_pos_hash_p_value=6.9	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=7.339e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.89	side_1_overlap=21	side_1_possible_overlap_registers=293	side_1_read_count=80	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.62	side_2_overlap=0	side_2_possible_overlap_registers=272	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=5
JC	74	.	NC_000913	1299498	-1	NC_000913	1300698	1	0	alignment_overlap=4	coverage_minus=78	coverage_plus=63	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=289	key=NC_000913__1299498__-1__NC_000913__1300694__1__4____300__300__0__0	max_left=294	max_left_minus=290	max_left_plus=294	max_min_left=147	max_min_left_minus=139	max_min_left_plus=147	max_min_right=143	max_min_right_minus=143	max_min_right_plus=142	max_pos_hash_score=578	max_right=295	max_right_minus=295	max_right_plus=295	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.66	new_junction_read_count=147	polymorphism_frequency=1.000e+00	pos_hash_score=76	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=4	side_1_possible_overlap_registers=293	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=141
JC	75	.	NC_000913	1411899	1	NC_000913	1434958	-1	0	alignment_overlap=26	coverage_minus=1	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=3.490e-02	junction_possible_overlap_registers=267	key=NC_000913__1411899__1__NC_000913__1434984__-1__26____300__300__0__0	max_left=182	max_left_minus=135	max_left_plus=182	max_min_left=135	max_min_left_minus=135	max_min_left_plus=132	max_min_right=92	max_min_right_minus=0	max_min_right_plus=92	max_pos_hash_score=534	max_right=142	max_right_minus=138	max_right_plus=142	neg_log10_pos_hash_p_value=7.9	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=3.490e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.10	side_1_overlap=26	side_1_possible_overlap_registers=293	side_1_read_count=99	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.60	side_2_overlap=0	side_2_possible_overlap_registers=267	side_2_read_count=131	side_2_redundant=0	total_non_overlap_reads=4
JC	76	.	NC_000913	1746452	-1	NC_000913	1746535	1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=5.605e-02	junction_possible_overlap_registers=292	key=NC_000913__1746452__-1__NC_000913__1746535__1__-1__C__300__300__0__0	max_left=189	max_left_minus=67	max_left_plus=189	max_min_left=136	max_min_left_minus=67	max_min_left_plus=136	max_min_right=110	max_min_right_minus=0	max_min_right_plus=110	max_pos_hash_score=584	max_right=239	max_right_minus=141	max_right_plus=239	neg_log10_pos_hash_p_value=7.2	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=5.605e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=0	side_1_possible_overlap_registers=293	side_1_read_count=92	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.86	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=77	side_2_redundant=0	total_non_overlap_reads=5	unique_read_sequence=C
JC	77	.	NC_000913	1978502	-1	NC_000913	1979279	1	0	alignment_overlap=8	coverage_minus=50	coverage_plus=49	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=285	key=NC_000913__1978502__-1__NC_000913__1979271__1__8____300__300__0__0	max_left=286	max_left_minus=257	max_left_plus=286	max_min_left=144	max_min_left_minus=132	max_min_left_plus=144	max_min_right=140	max_min_right_minus=123	max_min_right_plus=140	max_pos_hash_score=570	max_right=291	max_right_minus=291	max_right_plus=286	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.16	new_junction_read_count=101	polymorphism_frequency=1.000e+00	pos_hash_score=57	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=8	side_1_possible_overlap_registers=293	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=99
JC	78	.	NC_000913	2357742	-1	NC_000913	2357938	1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=6.136e-02	junction_possible_overlap_registers=282	key=NC_000913__2357742__-1__NC_000913__2357927__1__11____300__300__0__0	max_left=237	max_left_minus=237	max_left_plus=206	max_min_left=106	max_min_left_minus=0	max_min_left_plus=106	max_min_right=122	max_min_right_minus=122	max_min_right_plus=94	max_pos_hash_score=564	max_right=183	max_right_minus=122	max_right_plus=183	neg_log10_pos_hash_p_value=6.2	new_junction_coverage=0.08	new_junction_read_count=7	polymorphism_frequency=6.136e-02	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.44	side_1_overlap=11	side_1_possible_overlap_registers=293	side_1_read_count=129	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.04	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=90	side_2_redundant=0	total_non_overlap_reads=7
JC	79	.	NC_000913	2518116	-1	NC_000913	2518232	1	0	alignment_overlap=81	coverage_minus=4	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=8.765e-02	junction_possible_overlap_registers=212	key=NC_000913__2518116__-1__NC_000913__2518151__1__81____300__300__0__0	max_left=128	max_left_minus=128	max_left_plus=74	max_min_left=74	max_min_left_minus=69	max_min_left_plus=74	max_min_right=91	max_min_right_minus=91	max_min_right_plus=0	max_pos_hash_score=424	max_right=210	max_right_minus=210	max_right_plus=141	neg_log10_pos_hash_p_value=6.2	new_junction_coverage=0.08	new_junction_read_count=5	polymorphism_frequency=8.765e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.80	side_1_overlap=81	side_1_possible_overlap_registers=293	side_1_read_count=72	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=212	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=5
JC	80	.	NC_000913	2818275	-1	NC_000913	2818551	1	0	alignment_overlap=79	coverage_minus=1	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.851e-02	junction_possible_overlap_registers=214	key=NC_000913__2818275__-1__NC_000913__2818472__1__79____300__300__0__0	max_left=89	max_left_minus=89	max_left_plus=89	max_min_left=89	max_min_left_minus=89	max_min_left_plus=89	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=428	max_right=209	max_right_minus=127	max_right_plus=209	neg_log10_pos_hash_p_value=6.8	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=5.851e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.68	side_1_overlap=79	side_1_possible_overlap_registers=293	side_1_read_count=61	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.79	side_2_overlap=0	side_2_possible_overlap_registers=214	side_2_read_count=52	side_2_redundant=0	total_non_overlap_reads=3
JC	81	.	NC_000913	2877792	-1	NC_000913	2878283	1	0	alignment_overlap=19	coverage_minus=2	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=4.485e-02	junction_possible_overlap_registers=274	key=NC_000913__2877792__-1__NC_000913__2878264__1__19____300__300__0__0	max_left=97	max_left_minus=97	max_left_plus=97	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=42	max_min_right_minus=42	max_min_right_plus=36	max_pos_hash_score=548	max_right=42	max_right_minus=42	max_right_plus=36	neg_log10_pos_hash_p_value=8.0	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=4.485e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.72	side_1_overlap=19	side_1_possible_overlap_registers=293	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=67	side_2_redundant=0	total_non_overlap_reads=3
JC	82	.	NC_000913	2947467	-1	NC_000913	2947688	1	0	alignment_overlap=83	coverage_minus=4	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=1.469e-01	junction_possible_overlap_registers=210	key=NC_000913__2947467__-1__NC_000913__2947605__1__83____300__300__0__0	max_left=201	max_left_minus=64	max_left_plus=201	max_min_left=64	max_min_left_minus=64	max_min_left_plus=20	max_min_right=16	max_min_right_minus=0	max_min_right_plus=16	max_pos_hash_score=420	max_right=196	max_right_minus=196	max_right_plus=188	neg_log10_pos_hash_p_value=5.6	new_junction_coverage=0.09	new_junction_read_count=6	polymorphism_frequency=1.469e-01	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.52	side_1_overlap=83	side_1_possible_overlap_registers=293	side_1_read_count=47	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.56	side_2_overlap=0	side_2_possible_overlap_registers=210	side_2_read_count=36	side_2_redundant=0	total_non_overlap_reads=6
JC	83	.	NC_000913	3062921	-1	NC_000913	3063530	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.604e-02	junction_possible_overlap_registers=282	key=NC_000913__3062921__-1__NC_000913__3063519__1__11____300__300__0__0	max_left=28	max_left_minus=28	max_left_plus=28	max_min_left=28	max_min_left_minus=28	max_min_left_plus=28	max_min_right=12	max_min_right_minus=12	max_min_right_plus=12	max_pos_hash_score=564	max_right=62	max_right_minus=62	max_right_plus=62	neg_log10_pos_hash_p_value=8.1	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=5.604e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.67	side_1_overlap=11	side_1_possible_overlap_registers=293	side_1_read_count=60	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.89	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=77	side_2_redundant=0	total_non_overlap_reads=4
JC	84	.	NC_000913	3462737	-1	NC_000913	3463300	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=3.378e-02	junction_possible_overlap_registers=283	key=NC_000913__3462737__-1__NC_000913__3463290__1__10____300__300__0__0	max_left=84	max_left_minus=84	max_left_plus=84	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=35	max_min_right_minus=35	max_min_right_plus=35	max_pos_hash_score=566	max_right=35	max_right_minus=35	max_right_plus=35	neg_log10_pos_hash_p_value=8.2	new_junction_coverage=0.03	new_junction_read_count=3	polymorphism_frequency=3.378e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.10	side_1_overlap=10	side_1_possible_overlap_registers=293	side_1_read_count=99	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.88	side_2_overlap=0	side_2_possible_overlap_registers=283	side_2_read_count=76	side_2_redundant=0	total_non_overlap_reads=3
JC	85	.	NC_000913	3621836	-1	NC_000913	3622017	1	0	alignment_overlap=12	coverage_minus=5	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=281	key=NC_000913__3621848__-1__NC_000913__3622017__1__12____300__300__1__0	max_left=215	max_left_minus=215	max_left_plus=215	max_min_left=140	max_min_left_minus=140	max_min_left_plus=114	max_min_right=83	max_min_right_minus=83	max_min_right_plus=49	max_pos_hash_score=562	max_right=270	max_right_minus=209	max_right_plus=270	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.10	new_junction_read_count=9	polymorphism_frequency=8.243e-01	pos_hash_score=8	prediction=consensus	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=12	side_2_possible_overlap_registers=293	side_2_read_count=2	side_2_redundant=0	total_non_overlap_reads=9
JC	86	.	NC_000913	3764827	-1	NC_000913	3765008	1	0	alignment_overlap=12	coverage_minus=5	coverage_plus=5	flanking_left=300	flanking_right=300	frequency=7.227e-01	junction_possible_overlap_registers=281	key=NC_000913__3764839__-1__NC_000913__3765008__1__12____300__300__1__0	max_left=215	max_left_minus=215	max_left_plus=215	max_min_left=140	max_min_left_minus=140	max_min_left_plus=114	max_min_right=83	max_min_right_minus=83	max_min_right_plus=49	max_pos_hash_score=562	max_right=285	max_right_minus=209	max_right_plus=285	neg_log10_pos_hash_p_value=5.4	new_junction_coverage=0.12	new_junction_read_count=10	polymorphism_frequency=7.227e-01	pos_hash_score=9	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=12	side_2_possible_overlap_registers=293	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=10
JC	87	.	NC_000913	3854370	-1	NC_000913	3854935	1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.801e-02	junction_possible_overlap_registers=289	key=NC_000913__3854370__-1__NC_000913__3854931__1__4____300__300__0__0	max_left=61	max_left_minus=61	max_left_plus=61	max_min_left=58	max_min_left_minus=0	max_min_left_plus=58	max_min_right=46	max_min_right_minus=46	max_min_right_plus=46	max_pos_hash_score=578	max_right=93	max_right_minus=46	max_right_plus=93	neg_log10_pos_hash_p_value=8.3	new_junction_coverage=0.03	new_junction_read_count=3	polymorphism_frequency=4.801e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.85	side_1_overlap=4	side_1_possible_overlap_registers=293	side_1_read_count=76	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.50	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=44	side_2_redundant=0	total_non_overlap_reads=3
JC	88	.	NC_000913	4183583	-1	NC_000913	4183817	1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=3.912e-02	junction_possible_overlap_registers=285	key=NC_000913__4183583__-1__NC_000913__4183809__1__8____300__300__0__0	max_left=225	max_left_minus=225	max_left_plus=135	max_min_left=135	max_min_left_minus=0	max_min_left_plus=135	max_min_right=125	max_min_right_minus=125	max_min_right_plus=0	max_pos_hash_score=570	max_right=190	max_right_minus=125	max_right_plus=190	neg_log10_pos_hash_p_value=7.6	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=3.912e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.02	side_1_overlap=8	side_1_possible_overlap_registers=293	side_1_read_count=92	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.22	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=107	side_2_redundant=0	total_non_overlap_reads=4
JC	89	.	NC_000913	4542682	1	NC_000913	4542996	1	0	alignment_overlap=9	coverage_minus=4	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=6.120e-02	junction_possible_overlap_registers=284	key=NC_000913__4542682__1__NC_000913__4542987__1__9____300__300__0__0	max_left=266	max_left_minus=233	max_left_plus=266	max_min_left=134	max_min_left_minus=134	max_min_left_plus=127	max_min_right=81	max_min_right_minus=81	max_min_right_plus=39	max_pos_hash_score=568	max_right=229	max_right_minus=157	max_right_plus=229	neg_log10_pos_hash_p_value=6.2	new_junction_coverage=0.10	new_junction_read_count=9	polymorphism_frequency=6.120e-02	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.77	side_1_overlap=9	side_1_possible_overlap_registers=293	side_1_read_count=159	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.40	side_2_overlap=0	side_2_possible_overlap_registers=284	side_2_read_count=122	side_2_redundant=0	total_non_overlap_reads=8
JC	90	.	NC_000913	4542690	-1	NC_000913	4542986	-1	0	alignment_overlap=9	coverage_minus=3	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=4.685e-02	junction_possible_overlap_registers=284	key=NC_000913__4542690__-1__NC_000913__4542995__-1__9____300__300__0__0	max_left=197	max_left_minus=197	max_left_plus=126	max_min_left=127	max_min_left_minus=127	max_min_left_plus=126	max_min_right=94	max_min_right_minus=94	max_min_right_plus=0	max_pos_hash_score=568	max_right=231	max_right_minus=231	max_right_plus=226	neg_log10_pos_hash_p_value=6.6	new_junction_coverage=0.08	new_junction_read_count=7	polymorphism_frequency=4.685e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.87	side_1_overlap=9	side_1_possible_overlap_registers=293	side_1_read_count=168	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.40	side_2_overlap=0	side_2_possible_overlap_registers=284	side_2_read_count=122	side_2_redundant=0	total_non_overlap_reads=7
UN	91	.	NC_000913	15650	16453
UN	92	.	NC_000913	16456	16456
UN	93	.	NC_000913	16464	16464
UN	94	.	NC_000913	20067	20067
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UN	96	.	NC_000913	20282	20282
UN	97	.	NC_000913	20284	20287
UN	98	.	NC_000913	224019	224020
UN	99	.	NC_000913	224023	224023
UN	100	.	NC_000913	224026	224509
UN	101	.	NC_000913	225172	225323
UN	102	.	NC_000913	227266	228410
UN	103	.	NC_000913	228412	228412
UN	104	.	NC_000913	257908	258683
UN	105	.	NC_000913	270791	271016
UN	106	.	NC_000913	271018	271023
UN	107	.	NC_000913	274229	274229
UN	108	.	NC_000913	274231	274231
UN	109	.	NC_000913	274233	274863
UN	110	.	NC_000913	279436	279678
UN	111	.	NC_000913	290907	291128
UN	112	.	NC_000913	315509	316219
UN	113	.	NC_000913	316222	316222
UN	114	.	NC_000913	381525	382335
UN	115	.	NC_000913	391993	392700
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UN	118	.	NC_000913	567055	567784
UN	119	.	NC_000913	567786	567786
UN	120	.	NC_000913	574869	575505
UN	121	.	NC_000913	608283	609078
UN	122	.	NC_000913	688129	688129
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UN	124	.	NC_000913	688768	688768
UN	125	.	NC_000913	1094515	1095214
UN	126	.	NC_000913	1299499	1300697
UN	127	.	NC_000913	1396315	1396961
UN	128	.	NC_000913	1396963	1396963
UN	129	.	NC_000913	1468170	1468171
UN	130	.	NC_000913	1468176	1468177
UN	131	.	NC_000913	1468180	1468186
UN	132	.	NC_000913	1468188	1468952
UN	133	.	NC_000913	1469562	1469562
UN	134	.	NC_000913	1469567	1470228
UN	135	.	NC_000913	1528558	1528558
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UN	137	.	NC_000913	1528564	1528564
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UN	139	.	NC_000913	1528569	1528886
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UN	145	.	NC_000913	1978503	1979278
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UN	157	.	NC_000913	2289831	2289833
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UN	161	.	NC_000913	2515361	2515361
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UN	163	.	NC_000913	2515372	2515373
UN	164	.	NC_000913	2515376	2515377
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UN	166	.	NC_000913	2726341	2728990
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UN	206	.	NC_000913	3765045	3765045
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UN	215	.	NC_000913	4039644	4040368
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UN	217	.	NC_000913	4166571	4166604
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UN	224	.	NC_000913	4176836	4176837
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UN	227	.	NC_000913	4212854	4212854
UN	228	.	NC_000913	4498447	4499246
UN	229	.	NC_000913	4507747	4508429