#=GENOME_DIFF	1.0
#=CREATED	12:42:52 10 Oct 2025
#=PROGRAM	breseq 0.39.0 
#=COMMAND	breseq -j 8 -o /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_run15_rmdup_trimmng-adaptors-polyG/ME8308_S2_R1R2_RMDUP -r /ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8308_S2_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8308_S2_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=REFSEQ	/ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8308_S2_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8308_S2_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=CONVERTED-BASES	386132819
#=CONVERTED-READS	1306164
#=INPUT-BASES	386234861
#=INPUT-READS	1306514
#=MAPPED-BASES	372711529
#=MAPPED-READS	1261464
SNP	1	438	NC_000913	14172	T
SNP	2	439	NC_000913	64536	T
SNP	3	440	NC_000913	64539	C
SNP	4	441	NC_000913	64593	T
SNP	5	442	NC_000913	64635	G
SNP	6	443	NC_000913	64641	A
SNP	7	444	NC_000913	64644	A
SNP	8	445	NC_000913	64665	C
SNP	9	446	NC_000913	64677	T
SNP	10	447	NC_000913	64680	C
SNP	11	448	NC_000913	64686	G
SNP	12	449	NC_000913	64692	T
SNP	13	450	NC_000913	64713	C
SNP	14	451	NC_000913	64716	T
SNP	15	452	NC_000913	64749	A
SNP	16	453	NC_000913	64755	A
SNP	17	454	NC_000913	64794	C
SNP	18	455	NC_000913	64883	A
SNP	19	456	NC_000913	64896	G
SNP	20	457	NC_000913	65028	A
SNP	21	458	NC_000913	65031	G
SNP	22	459	NC_000913	65043	C
SNP	23	460	NC_000913	65046	C
SNP	24	461	NC_000913	65057	T
SNP	25	462	NC_000913	65169	T
SNP	26	463	NC_000913	65171	G
SNP	27	464	NC_000913	65202	A
SNP	28	465	NC_000913	65208	G
SNP	29	466	NC_000913	65213	C
SNP	30	467	NC_000913	65232	T
SNP	31	468	NC_000913	65316	A
SNP	32	469	NC_000913	65381	C
SNP	33	470	NC_000913	65454	G
SNP	34	471	NC_000913	65594	C
SNP	35	472	NC_000913	65785	T
SNP	36	473	NC_000913	65788	T
SNP	37	474	NC_000913	65811	T
SNP	38	475	NC_000913	65905	T
DEL	39	476	NC_000913	66024	1
SNP	40	477	NC_000913	66032	T
SNP	41	478	NC_000913	66041	A
SNP	42	479	NC_000913	66053	G
SNP	43	480	NC_000913	66092	G
SNP	44	481	NC_000913	66134	A
SNP	45	482	NC_000913	66227	G
SNP	46	483	NC_000913	66245	A
SNP	47	484	NC_000913	66263	T
SNP	48	485	NC_000913	66266	G
SNP	49	486	NC_000913	66287	C
SNP	50	487	NC_000913	66308	T
SNP	51	488	NC_000913	66323	A
SNP	52	489	NC_000913	66343	C
SNP	53	490	NC_000913	66403	T
SNP	54	491	NC_000913	66494	A
SNP	55	492	NC_000913	66518	C
SNP	56	493	NC_000913	66686	G
SNP	57	494	NC_000913	66688	A
SNP	58	495	NC_000913	66784	T
SNP	59	496	NC_000913	66819	C
SNP	60	497	NC_000913	66823	T
SNP	61	498	NC_000913	66830	A
SNP	62	499	NC_000913	66847	T
SNP	63	500	NC_000913	66898	G
SNP	64	501	NC_000913	66901	A
SNP	65	502	NC_000913	66946	C
SNP	66	503	NC_000913	66970	C
SNP	67	504	NC_000913	67111	A
SNP	68	505	NC_000913	67123	C
SNP	69	506	NC_000913	67152	G
SNP	70	507	NC_000913	67171	A
SNP	71	508	NC_000913	67195	T
SNP	72	509	NC_000913	67259	A
SNP	73	510	NC_000913	67264	A
SNP	74	511	NC_000913	67405	G
SNP	75	512	NC_000913	67471	T
SNP	76	513	NC_000913	67596	C
SNP	77	514	NC_000913	67612	T
SNP	78	515	NC_000913	67759	A
SNP	79	516	NC_000913	67798	A
SNP	80	517	NC_000913	67834	A
SNP	81	518	NC_000913	67900	G
SNP	82	519	NC_000913	68236	A
SNP	83	520	NC_000913	68468	T
SNP	84	521	NC_000913	68476	G
SNP	85	522	NC_000913	68519	G
SNP	86	523	NC_000913	68678	C
SNP	87	524	NC_000913	68693	G
SNP	88	525	NC_000913	68837	T
SNP	89	526	NC_000913	68840	C
SNP	90	527	NC_000913	68842	A
SNP	91	528	NC_000913	68846	A
SNP	92	529	NC_000913	68849	A
SNP	93	530	NC_000913	68956	C
SNP	94	531	NC_000913	69001	T
SNP	95	532	NC_000913	69014	G
SNP	96	533	NC_000913	69323	G
SNP	97	534	NC_000913	69400	A
SNP	98	535	NC_000913	69605	G
SNP	99	536	NC_000913	69611	A
SNP	100	537	NC_000913	69629	A
DEL	101	538	NC_000913	69665	1
INS	102	539	NC_000913	69672	T
SNP	103	540	NC_000913	69752	A
SNP	104	541	NC_000913	69935	T
SNP	105	542	NC_000913	69981	C
SNP	106	543	NC_000913	69983	G
SNP	107	544	NC_000913	70289	T
SNP	108	545	NC_000913	70371	C
SNP	109	546	NC_000913	70434	T
SNP	110	547	NC_000913	70581	T
SNP	111	548	NC_000913	70740	G
SNP	112	549	NC_000913	71079	T
SNP	113	550	NC_000913	71082	C
SNP	114	551	NC_000913	71085	C
SNP	115	552	NC_000913	71109	C
SNP	116	553	NC_000913	71175	G
SNP	117	554	NC_000913	71214	C
SNP	118	555	NC_000913	71386	T
SNP	119	556	NC_000913	71543	G
SNP	120	557	NC_000913	71545	C
SNP	121	558	NC_000913	71548	T
SUB	122	559,560	NC_000913	71551	2	TC
SNP	123	561	NC_000913	71555	C
SNP	124	562	NC_000913	71569	C
SNP	125	563	NC_000913	71572	C
SNP	126	564	NC_000913	71584	C
SNP	127	565	NC_000913	71639	T
SNP	128	566	NC_000913	71644	C
SNP	129	567	NC_000913	71701	C
SNP	130	568	NC_000913	71764	A
SNP	131	569	NC_000913	71770	C
SNP	132	570	NC_000913	71806	A
SNP	133	571	NC_000913	71824	T
SNP	134	572	NC_000913	71857	A
SNP	135	573	NC_000913	71875	C
SNP	136	574	NC_000913	71899	G
SNP	137	575	NC_000913	71902	G
SNP	138	576	NC_000913	71908	A
SNP	139	577	NC_000913	71912	G
SNP	140	578	NC_000913	71962	A
SNP	141	579	NC_000913	71965	C
SNP	142	580	NC_000913	71968	T
SNP	143	581	NC_000913	71974	A
SNP	144	582	NC_000913	71989	G
SNP	145	583	NC_000913	71995	C
SNP	146	584	NC_000913	72117	G
SNP	147	585	NC_000913	72121	T
SUB	148	586,587	NC_000913	72151	2	GA
SUB	149	588,589	NC_000913	72183	2	GT
SNP	150	590	NC_000913	72202	T
SNP	151	591	NC_000913	72217	T
SNP	152	592	NC_000913	72253	T
SNP	153	593	NC_000913	72290	T
SNP	154	594	NC_000913	72322	C
SNP	155	595	NC_000913	72325	C
SNP	156	596	NC_000913	72349	G
SNP	157	597	NC_000913	72361	A
SNP	158	598	NC_000913	72367	T
SNP	159	599	NC_000913	72381	A
SNP	160	600	NC_000913	72423	G
SNP	161	601	NC_000913	72493	C
SNP	162	602	NC_000913	72517	G
SNP	163	603	NC_000913	72547	A
SNP	164	604	NC_000913	72605	T
SNP	165	605	NC_000913	72614	G
SNP	166	606	NC_000913	72661	C
SNP	167	607	NC_000913	72676	A
SNP	168	608	NC_000913	72691	T
SNP	169	609	NC_000913	72731	G
SNP	170	610	NC_000913	72733	C
SNP	171	611	NC_000913	72736	G
SNP	172	612	NC_000913	72745	A
SNP	173	613	NC_000913	72751	G
SNP	174	614	NC_000913	72799	G
SNP	175	615	NC_000913	72820	T
SNP	176	616	NC_000913	72862	T
SNP	177	617	NC_000913	72892	T
SNP	178	618	NC_000913	72928	C
SNP	179	619	NC_000913	72974	T
SNP	180	620	NC_000913	73001	G
SNP	181	621	NC_000913	73115	G
SNP	182	622	NC_000913	73121	A
SNP	183	623	NC_000913	73163	G
SNP	184	624	NC_000913	73178	C
SNP	185	625	NC_000913	73193	G
SNP	186	626	NC_000913	73208	C
SNP	187	627	NC_000913	73214	A
SNP	188	628	NC_000913	73253	T
SNP	189	629	NC_000913	73319	C
SNP	190	630	NC_000913	73328	A
SNP	191	631	NC_000913	73331	G
SNP	192	632	NC_000913	73413	G
SNP	193	633	NC_000913	73445	A
SNP	194	634	NC_000913	73582	G
SNP	195	635	NC_000913	73604	C
SNP	196	636	NC_000913	73712	T
SNP	197	637	NC_000913	73744	G
SNP	198	638	NC_000913	73753	A
SNP	199	639	NC_000913	73763	A
SNP	200	640	NC_000913	73777	T
SNP	201	641	NC_000913	73790	C
SNP	202	642	NC_000913	73853	T
SNP	203	643	NC_000913	73868	G
SNP	204	644	NC_000913	73919	T
SUB	205	645,646	NC_000913	73984	2	CG
SNP	206	647	NC_000913	74009	C
SNP	207	648	NC_000913	74015	T
SNP	208	649	NC_000913	74027	A
SNP	209	650	NC_000913	74069	T
SNP	210	651	NC_000913	74081	T
SNP	211	652	NC_000913	74084	G
SNP	212	653	NC_000913	74087	C
SNP	213	654	NC_000913	74204	A
SNP	214	655	NC_000913	74209	G
SNP	215	656	NC_000913	74222	T
SNP	216	657	NC_000913	74234	G
SNP	217	658	NC_000913	74308	C
SNP	218	659	NC_000913	74321	C
SNP	219	660	NC_000913	75707	T
SUB	220	661,662	NC_000913	75752	2	G
SUB	221	663,664	NC_000913	75758	1	GC
SNP	222	665	NC_000913	75767	T
SNP	223	666	NC_000913	75806	G
SNP	224	667	NC_000913	75812	T
SNP	225	668	NC_000913	75830	G
SNP	226	669	NC_000913	75833	G
SNP	227	670	NC_000913	75851	G
SNP	228	671	NC_000913	75854	C
SNP	229	672	NC_000913	75860	A
SNP	230	673	NC_000913	75863	G
SNP	231	674	NC_000913	75869	G
SNP	232	675	NC_000913	75875	C
SNP	233	676	NC_000913	75881	C
SNP	234	677	NC_000913	75887	C
SNP	235	678	NC_000913	75890	G
SNP	236	679	NC_000913	75893	C
SNP	237	680	NC_000913	75899	C
SUB	238	681,682	NC_000913	75901	2	GC
SNP	239	683	NC_000913	75905	A
SNP	240	684	NC_000913	75908	A
SNP	241	685	NC_000913	75920	C
SNP	242	686	NC_000913	75938	A
SNP	243	687	NC_000913	75950	G
SNP	244	688	NC_000913	75953	C
SUB	245	689,690	NC_000913	75966	2	TC
SUB	246	691,692	NC_000913	75984	2	CT
SNP	247	693	NC_000913	76000	C
SNP	248	694	NC_000913	76082	C
SNP	249	695	NC_000913	76086	A
SNP	250	696	NC_000913	76283	T
SNP	251	697	NC_000913	76334	A
SNP	252	698	NC_000913	76358	A
SNP	253	699	NC_000913	76364	A
SNP	254	700	NC_000913	76478	G
SNP	255	701	NC_000913	76576	A
SNP	256	702	NC_000913	76700	G
SNP	257	703	NC_000913	76727	A
SNP	258	704	NC_000913	76775	T
SNP	259	705	NC_000913	76862	A
SNP	260	706	NC_000913	77021	T
SNP	261	707	NC_000913	77027	G
SNP	262	708	NC_000913	77117	A
SNP	263	709	NC_000913	77776	A
SNP	264	710	NC_000913	78406	T
SNP	265	711	NC_000913	78520	A
SNP	266	712	NC_000913	78524	C
SNP	267	713	NC_000913	78533	C
SNP	268	714	NC_000913	78761	A
SNP	269	715	NC_000913	79040	G
SNP	270	716	NC_000913	80529	G
SNP	271	717	NC_000913	82633	G
SNP	272	718	NC_000913	82894	G
SNP	273	719	NC_000913	82909	T
SNP	274	720	NC_000913	82933	A
SNP	275	721	NC_000913	82957	T
SNP	276	722	NC_000913	83179	T
SNP	277	723	NC_000913	83182	A
SNP	278	724	NC_000913	83296	C
SNP	279	725	NC_000913	83317	G
SNP	280	726	NC_000913	83344	A
SNP	281	727	NC_000913	83359	T
SNP	282	728	NC_000913	83371	A
SNP	283	729	NC_000913	83383	A
SNP	284	730	NC_000913	84251	T
SNP	285	731	NC_000913	84267	C
SUB	286	732,733	NC_000913	84305	2	CG
SNP	287	734	NC_000913	84415	G
SNP	288	735	NC_000913	85481	C
SNP	289	736	NC_000913	86241	G
SNP	290	737	NC_000913	86271	T
SNP	291	738	NC_000913	86315	T
SNP	292	739	NC_000913	86345	C
SNP	293	740	NC_000913	86658	G
SNP	294	741	NC_000913	87410	T
SNP	295	742	NC_000913	89089	A
SNP	296	743	NC_000913	89103	C
SNP	297	744	NC_000913	89143	G
SNP	298	745	NC_000913	89145	T
SNP	299	746	NC_000913	89239	A
SNP	300	747	NC_000913	89241	A
SNP	301	748	NC_000913	89263	G
SNP	302	749	NC_000913	89316	C
SNP	303	750	NC_000913	89321	G
SNP	304	751	NC_000913	89471	G
SNP	305	752	NC_000913	89570	C
SNP	306	753	NC_000913	89699	C
SNP	307	754	NC_000913	89754	C
SNP	308	755	NC_000913	90432	G
SNP	309	756	NC_000913	90435	C
SNP	310	757	NC_000913	91904	A
SNP	311	758	NC_000913	91916	T
SNP	312	759	NC_000913	91922	A
SNP	313	760	NC_000913	91949	T
SNP	314	761	NC_000913	92096	T
SNP	315	762	NC_000913	92162	T
SNP	316	763	NC_000913	92327	T
SNP	317	764	NC_000913	92354	G
SNP	318	765	NC_000913	92687	G
SNP	319	766	NC_000913	92810	C
SNP	320	767	NC_000913	92843	G
SNP	321	768	NC_000913	94278	A
SNP	322	769	NC_000913	134256	T
SNP	323	771	NC_000913	246747	T
DEL	324	917,926	NC_000913	257908	776
DEL	325	918,927	NC_000913	275509	97240
SUB	326	772,773	NC_000913	480295	2	AA
SNP	327	775	NC_000913	690948	A
SNP	328	776	NC_000913	700038	A
SUB	329	780,781	NC_000913	809217	2	AG
SNP	330	784	NC_000913	968837	A
SNP	331	785	NC_000913	1040126	T
SNP	332	786	NC_000913	1041585	T
SNP	333	787	NC_000913	1061935	A
SNP	334	788	NC_000913	1062188	T
SNP	335	789	NC_000913	1086443	T
SUB	336	790,791	NC_000913	1111727	2	TT
SNP	337	792	NC_000913	1169836	G
SNP	338	793	NC_000913	1189980	G
SNP	339	794	NC_000913	1196220	T
SNP	340	795	NC_000913	1196232	T
SNP	341	796	NC_000913	1196245	C
SNP	342	797	NC_000913	1196247	G
SNP	343	798	NC_000913	1196277	T
SNP	344	799	NC_000913	1196280	C
SNP	345	800	NC_000913	1196283	G
SNP	346	801	NC_000913	1196292	T
SNP	347	806	NC_000913	1242609	T
SNP	348	808	NC_000913	1301992	T
MOB	349	928,942	NC_000913	1303314	IS186	1	6	del_end=1
SNP	350	809	NC_000913	1306736	G
SNP	351	810	NC_000913	1310770	G
SNP	352	811	NC_000913	1337394	G
SNP	353	813	NC_000913	1357202	T
SNP	354	814	NC_000913	1358859	C
MOB	355	944,945	NC_000913	1399590	IS5	1	4
SNP	356	816	NC_000913	1449738	T
SNP	357	817	NC_000913	1475514	G
SNP	358	820	NC_000913	1643679	T
SNP	359	821	NC_000913	1652331	C
SNP	360	822	NC_000913	1721136	T
SNP	361	823	NC_000913	1776715	T
SNP	362	825	NC_000913	1894839	C
MOB	363	946,947	NC_000913	1907577	IS1	-1	8
INS	364	826	NC_000913	1978083	A
SNP	365	827	NC_000913	1987499	A
SNP	366	828	NC_000913	2027332	A
SNP	367	829	NC_000913	2040433	A
SNP	368	830	NC_000913	2041278	A
SNP	369	831	NC_000913	2052885	A
SNP	370	832	NC_000913	2099525	T
DEL	371	833	NC_000913	2111259	1
SNP	372	834	NC_000913	2125037	A
DEL	373	835,836	NC_000913	2173363	2
SNP	374	837	NC_000913	2188087	C
DEL	375	921,952	NC_000913	2262279	6678
SNP	376	838	NC_000913	2339173	A
SNP	377	839	NC_000913	2384808	T
SNP	378	840	NC_000913	2410419	A
SNP	379	842	NC_000913	2481400	A
SNP	380	843	NC_000913	2484827	T
SNP	381	844	NC_000913	2579943	A
DEL	382	845	NC_000913	2757775	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=T
MOB	383	953,954	NC_000913	2913392	IS2	-1	5
SNP	384	850	NC_000913	2926292	T
SUB	385	854,855	NC_000913	3088010	2	TT
SNP	386	856	NC_000913	3223646	T
SUB	387	858,859	NC_000913	3336411	2	AT
SNP	388	860	NC_000913	3388041	G
MOB	389	936,950	NC_000913	3429988	IS3	-1	3
SNP	390	861	NC_000913	3474425	C
SNP	391	862	NC_000913	3486175	A
SNP	392	863	NC_000913	3486502	T
SNP	393	864	NC_000913	3536316	C
MOB	394	955,956	NC_000913	3546574	IS2	1	5
INS	395	866	NC_000913	3560455	G
SNP	396	869	NC_000913	3629921	T
SNP	397	870	NC_000913	3682515	T
SNP	398	871	NC_000913	3707947	A
DEL	399	923,960	NC_000913	3708467	168
SNP	400	872	NC_000913	3725176	G
SNP	401	874	NC_000913	3761230	A
SNP	402	875	NC_000913	3771979	T
INS	403	876	NC_000913	3815883	C
INS	404	962	NC_000913	3822651	CAGGAT	repeat_length=6	repeat_new_copies=2	repeat_ref_copies=1	repeat_seq=CAGGAT
SNP	405	877	NC_000913	3823162	T
SNP	406	878	NC_000913	3869637	A
SNP	407	879	NC_000913	3878536	A
SNP	408	881	NC_000913	3906764	A
SNP	409	883	NC_000913	3925200	C
SNP	410	884	NC_000913	3926991	A
SUB	411	885,886	NC_000913	3966530	2	TT
SNP	412	887	NC_000913	4003502	T
SNP	413	888	NC_000913	4015220	C
SNP	414	889	NC_000913	4015225	T
SNP	415	890	NC_000913	4084903	G
SNP	416	891	NC_000913	4092703	G
SNP	417	892	NC_000913	4113851	A
SNP	418	893	NC_000913	4143377	T
SNP	419	894	NC_000913	4161248	T
SNP	420	895	NC_000913	4164123	G
SNP	421	896	NC_000913	4215347	A
SNP	422	897	NC_000913	4223638	C
INS	423	898	NC_000913	4282332	A	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=5	repeat_seq=A
SUB	424	899,900	NC_000913	4293781	2	AT
INS	425	903,904	NC_000913	4296381	GC
SNP	426	905	NC_000913	4325644	T
SNP	427	906	NC_000913	4392997	A
SNP	428	907	NC_000913	4393552	A
SNP	429	908	NC_000913	4396373	T
SNP	430	909	NC_000913	4396772	C
SNP	431	910	NC_000913	4473900	T
SNP	432	911	NC_000913	4475493	C
SNP	433	912	NC_000913	4508810	T
SNP	434	913	NC_000913	4510238	G
SNP	435	914	NC_000913	4556486	T
SNP	436	915	NC_000913	4561368	T
DEL	437	916	NC_000913	4563778	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=G
RA	438	.	NC_000913	14172	0	C	T	consensus_score=348.8	frequency=1	major_base=T	major_cov=51/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/46
RA	439	.	NC_000913	64536	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=235.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=37/29	major_frequency=9.851e-01	minor_base=C	minor_cov=1/0	new_cov=37/29	polymorphism_frequency=9.851e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=38/29
RA	440	.	NC_000913	64539	0	T	C	consensus_score=232.2	frequency=1	major_base=C	major_cov=38/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/29
RA	441	.	NC_000913	64593	0	C	T	consensus_score=243.7	frequency=1	major_base=T	major_cov=44/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/24
RA	442	.	NC_000913	64635	0	A	G	consensus_score=232.6	frequency=1	major_base=G	major_cov=44/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/20
RA	443	.	NC_000913	64641	0	T	A	consensus_score=222.8	frequency=1	major_base=A	major_cov=51/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/18
RA	444	.	NC_000913	64644	0	C	A	consensus_score=211.2	frequency=1	major_base=A	major_cov=51/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/18
RA	445	.	NC_000913	64665	0	T	C	bias_e_value=4637990	bias_p_value=0.999212	consensus_score=250.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.960557	major_base=C	major_cov=49/21	major_frequency=9.859e-01	minor_base=A	minor_cov=1/0	new_cov=49/21	polymorphism_frequency=9.859e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/0	total_cov=50/21
RA	446	.	NC_000913	64677	0	A	T	consensus_score=264.4	frequency=1	major_base=T	major_cov=51/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/22
RA	447	.	NC_000913	64680	0	G	C	bias_e_value=4076370	bias_p_value=0.878215	consensus_score=236.2	fisher_strand_p_value=0.549006	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=48/22	major_frequency=9.589e-01	minor_base=A	minor_cov=3/0	new_cov=48/22	polymorphism_frequency=9.589e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/22
RA	448	.	NC_000913	64686	0	T	G	consensus_score=261.5	frequency=1	major_base=G	major_cov=51/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/22
RA	449	.	NC_000913	64692	0	C	T	consensus_score=274.9	frequency=1	major_base=T	major_cov=53/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/23
RA	450	.	NC_000913	64713	0	T	C	consensus_score=290.4	frequency=1	major_base=C	major_cov=61/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/21
RA	451	.	NC_000913	64716	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=292.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=60/21	major_frequency=9.878e-01	minor_base=C	minor_cov=1/0	new_cov=60/21	polymorphism_frequency=9.878e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=61/21
RA	452	.	NC_000913	64749	0	G	A	bias_e_value=3993160	bias_p_value=0.860288	consensus_score=281.8	fisher_strand_p_value=0.520376	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=52/34	major_frequency=9.773e-01	minor_base=C	minor_cov=2/0	new_cov=52/34	polymorphism_frequency=9.773e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/34
RA	453	.	NC_000913	64755	0	G	A	bias_e_value=4641650	bias_p_value=0.999999	consensus_score=285.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998931	major_base=A	major_cov=51/35	major_frequency=9.885e-01	minor_base=C	minor_cov=1/0	new_cov=51/35	polymorphism_frequency=9.885e-01	polymorphism_score=-6.7	prediction=consensus	ref_cov=0/0	total_cov=52/35
RA	454	.	NC_000913	64794	0	T	C	bias_e_value=3938450	bias_p_value=0.848501	consensus_score=294.8	fisher_strand_p_value=0.502792	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=45/36	major_frequency=9.759e-01	minor_base=A	minor_cov=2/0	new_cov=45/36	polymorphism_frequency=9.759e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/36
RA	455	.	NC_000913	64883	0	G	A	bias_e_value=3652930	bias_p_value=0.786989	consensus_score=294.0	fisher_strand_p_value=0.423529	frequency=1	ks_quality_p_value=0.99888	major_base=A	major_cov=35/49	major_frequency=9.882e-01	minor_base=C	minor_cov=1/0	new_cov=35/49	polymorphism_frequency=9.882e-01	polymorphism_score=-6.7	prediction=consensus	ref_cov=0/0	total_cov=36/49
RA	456	.	NC_000913	64896	0	A	G	bias_e_value=3761130	bias_p_value=0.810301	consensus_score=301.6	fisher_strand_p_value=0.45122	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=36/45	major_frequency=9.878e-01	minor_base=T	minor_cov=1/0	new_cov=36/45	polymorphism_frequency=9.878e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/45
RA	457	.	NC_000913	65028	0	G	A	consensus_score=253.1	frequency=1	major_base=A	major_cov=22/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/50
RA	458	.	NC_000913	65031	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=260.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=22/49	major_frequency=9.861e-01	minor_base=C	minor_cov=0/1	new_cov=22/49	polymorphism_frequency=9.861e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/0	total_cov=22/50
RA	459	.	NC_000913	65043	0	A	C	consensus_score=254.6	frequency=1	major_base=C	major_cov=22/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/47
RA	460	.	NC_000913	65046	0	A	C	consensus_score=253.7	frequency=1	major_base=C	major_cov=22/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/47
RA	461	.	NC_000913	65057	0	G	T	consensus_score=230.9	frequency=1	major_base=T	major_cov=23/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/45
RA	462	.	NC_000913	65169	0	C	T	consensus_score=197.5	frequency=1	major_base=T	major_cov=20/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/38
RA	463	.	NC_000913	65171	0	A	G	consensus_score=207.1	frequency=1	major_base=G	major_cov=20/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/38
RA	464	.	NC_000913	65202	0	G	A	consensus_score=210.2	frequency=1	major_base=A	major_cov=20/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/40
RA	465	.	NC_000913	65208	0	A	G	consensus_score=222.6	frequency=1	major_base=G	major_cov=20/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/40
RA	466	.	NC_000913	65213	0	A	C	consensus_score=211.5	frequency=1	major_base=C	major_cov=20/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/39
RA	467	.	NC_000913	65232	0	C	T	consensus_score=199.3	frequency=1	major_base=T	major_cov=20/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/37
RA	468	.	NC_000913	65316	0	T	A	consensus_score=101.1	frequency=1	major_base=A	major_cov=13/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/17
RA	469	.	NC_000913	65381	0	T	C	consensus_score=99.6	frequency=1	major_base=C	major_cov=10/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/19
RA	470	.	NC_000913	65454	0	A	G	consensus_score=94.7	frequency=1	major_base=G	major_cov=14/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/13
RA	471	.	NC_000913	65594	0	A	C	consensus_score=122.0	frequency=1	major_base=C	major_cov=20/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/15
RA	472	.	NC_000913	65785	0	A	T	consensus_score=162.1	frequency=1	major_base=T	major_cov=26/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/19
RA	473	.	NC_000913	65788	0	A	T	consensus_score=157.9	frequency=1	major_base=T	major_cov=26/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/19
RA	474	.	NC_000913	65811	0	G	T	consensus_score=179.4	frequency=1	major_base=T	major_cov=33/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/20
RA	475	.	NC_000913	65905	0	C	T	consensus_score=250.3	frequency=1	major_base=T	major_cov=47/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/24
RA	476	.	NC_000913	66024	0	C	.	bias_e_value=3363510	bias_p_value=0.724637	consensus_score=374.9	fisher_strand_p_value=0.3625	frequency=1	ks_quality_p_value=0.984613	major_base=.	major_cov=51/28	major_frequency=9.875e-01	minor_base=C	minor_cov=0/1	new_cov=51/28	polymorphism_frequency=9.875e-01	polymorphism_score=-2.7	prediction=consensus	ref_cov=0/1	total_cov=51/29
RA	477	.	NC_000913	66032	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=264.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=49/28	major_frequency=9.872e-01	minor_base=C	minor_cov=1/0	new_cov=49/28	polymorphism_frequency=9.872e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=50/28
RA	478	.	NC_000913	66041	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=255.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=50/28	major_frequency=9.873e-01	minor_base=G	minor_cov=1/0	new_cov=50/28	polymorphism_frequency=9.873e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=51/28
RA	479	.	NC_000913	66053	0	A	G	consensus_score=292.1	frequency=1	major_base=G	major_cov=54/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=54/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/27
RA	480	.	NC_000913	66092	0	A	G	bias_e_value=2258150	bias_p_value=0.486496	consensus_score=253.3	fisher_strand_p_value=0.178739	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=43/30	major_frequency=9.733e-01	minor_base=T	minor_cov=0/2	new_cov=43/30	polymorphism_frequency=9.733e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=43/33
RA	481	.	NC_000913	66134	0	G	A	consensus_score=260.5	frequency=1	major_base=A	major_cov=44/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/36
RA	482	.	NC_000913	66227	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=294.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=34/46	major_frequency=9.877e-01	minor_base=T	minor_cov=0/1	new_cov=34/46	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/47
RA	483	.	NC_000913	66245	0	G	A	consensus_score=298.7	frequency=1	major_base=A	major_cov=36/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/50
RA	484	.	NC_000913	66263	0	C	T	consensus_score=261.6	frequency=1	major_base=T	major_cov=28/49	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/49	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/49
RA	485	.	NC_000913	66266	0	A	G	consensus_score=272.9	frequency=1	major_base=G	major_cov=28/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/50
RA	486	.	NC_000913	66287	0	G	C	consensus_score=238.9	frequency=1	major_base=C	major_cov=27/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/43
RA	487	.	NC_000913	66308	0	C	T	consensus_score=209.5	frequency=1	major_base=T	major_cov=25/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/39
RA	488	.	NC_000913	66323	0	G	A	consensus_score=219.4	frequency=1	major_base=A	major_cov=23/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/42
RA	489	.	NC_000913	66343	0	T	C	consensus_score=228.2	frequency=1	major_base=C	major_cov=21/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/44
RA	490	.	NC_000913	66403	0	C	T	consensus_score=173.8	frequency=1	major_base=T	major_cov=20/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/35
RA	491	.	NC_000913	66494	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=126.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=16/23	major_frequency=9.750e-01	minor_base=G	minor_cov=0/1	new_cov=16/23	polymorphism_frequency=9.750e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=16/24
RA	492	.	NC_000913	66518	0	T	C	consensus_score=148.1	frequency=1	major_base=C	major_cov=18/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/27
RA	493	.	NC_000913	66686	0	C	G	bias_e_value=3687500	bias_p_value=0.794438	consensus_score=114.5	fisher_strand_p_value=0.431818	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=18/25	major_frequency=9.773e-01	minor_base=A	minor_cov=1/0	new_cov=18/25	polymorphism_frequency=9.773e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/25
RA	494	.	NC_000913	66688	0	G	A	bias_e_value=3687500	bias_p_value=0.794438	consensus_score=113.8	fisher_strand_p_value=0.431818	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=18/25	major_frequency=9.773e-01	minor_base=G	minor_cov=1/0	new_cov=18/25	polymorphism_frequency=9.773e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=19/25
RA	495	.	NC_000913	66784	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=154.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=32/19	major_frequency=9.808e-01	minor_base=C	minor_cov=1/0	new_cov=32/19	polymorphism_frequency=9.808e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/19
RA	496	.	NC_000913	66819	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=194.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=37/22	major_frequency=9.833e-01	minor_base=A	minor_cov=1/0	new_cov=37/22	polymorphism_frequency=9.833e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/22
RA	497	.	NC_000913	66823	0	G	T	consensus_score=180.0	frequency=1	major_base=T	major_cov=38/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/20
RA	498	.	NC_000913	66830	0	G	A	consensus_score=177.6	frequency=1	major_base=A	major_cov=40/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/21
RA	499	.	NC_000913	66847	0	C	T	consensus_score=211.0	frequency=1	major_base=T	major_cov=40/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/24
RA	500	.	NC_000913	66898	0	T	G	consensus_score=216.3	frequency=1	major_base=G	major_cov=41/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/22
RA	501	.	NC_000913	66901	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=190.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999504	major_base=A	major_cov=40/23	major_frequency=9.844e-01	minor_base=C	minor_cov=1/0	new_cov=40/23	polymorphism_frequency=9.844e-01	polymorphism_score=-6.3	prediction=consensus	ref_cov=0/0	total_cov=41/23
RA	502	.	NC_000913	66946	0	T	C	consensus_score=227.1	frequency=1	major_base=C	major_cov=42/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/21
RA	503	.	NC_000913	66970	0	T	C	consensus_score=216.0	frequency=1	major_base=C	major_cov=41/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/20
RA	504	.	NC_000913	67111	0	G	A	consensus_score=254.4	frequency=1	major_base=A	major_cov=38/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/42
RA	505	.	NC_000913	67123	0	T	C	consensus_score=277.1	frequency=1	major_base=C	major_cov=35/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/41
RA	506	.	NC_000913	67152	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=236.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=33/37	major_frequency=9.859e-01	minor_base=T	minor_cov=0/1	new_cov=33/37	polymorphism_frequency=9.859e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/38
RA	507	.	NC_000913	67171	0	G	A	consensus_score=217.3	frequency=1	major_base=A	major_cov=33/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/38
RA	508	.	NC_000913	67195	0	G	T	consensus_score=277.4	frequency=1	major_base=T	major_cov=35/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/43
RA	509	.	NC_000913	67259	0	G	A	bias_e_value=3703890	bias_p_value=0.797969	consensus_score=246.0	fisher_strand_p_value=0.443038	frequency=1	ks_quality_p_value=0.984222	major_base=A	major_cov=34/44	major_frequency=9.873e-01	minor_base=C	minor_cov=1/0	new_cov=34/44	polymorphism_frequency=9.873e-01	polymorphism_score=-6.5	prediction=consensus	ref_cov=0/0	total_cov=35/44
RA	510	.	NC_000913	67264	0	G	A	bias_e_value=3730570	bias_p_value=0.803715	consensus_score=260.4	fisher_strand_p_value=0.443038	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=34/44	major_frequency=9.873e-01	minor_base=C	minor_cov=1/0	new_cov=34/44	polymorphism_frequency=9.873e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/44
RA	511	.	NC_000913	67405	0	A	G	consensus_score=228.6	frequency=1	major_base=G	major_cov=29/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/35
RA	512	.	NC_000913	67471	0	A	T	consensus_score=218.2	frequency=1	major_base=T	major_cov=32/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/36
RA	513	.	NC_000913	67596	0	T	C	consensus_score=222.7	frequency=1	major_base=C	major_cov=30/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/30
RA	514	.	NC_000913	67612	0	G	T	consensus_score=193.6	frequency=1	major_base=T	major_cov=28/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/31
RA	515	.	NC_000913	67759	0	G	A	bias_e_value=2800410	bias_p_value=0.603321	consensus_score=184.6	fisher_strand_p_value=0.254902	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=12/38	major_frequency=9.804e-01	minor_base=C	minor_cov=1/0	new_cov=12/38	polymorphism_frequency=9.804e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/38
RA	516	.	NC_000913	67798	0	T	A	consensus_score=171.5	frequency=1	major_base=A	major_cov=8/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/38
RA	517	.	NC_000913	67834	0	G	A	consensus_score=174.9	frequency=1	major_base=A	major_cov=5/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/43
RA	518	.	NC_000913	67900	0	C	G	consensus_score=139.0	frequency=1	major_base=G	major_cov=1/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=1/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=1/38
RA	519	.	NC_000913	68236	0	G	A	consensus_score=49.0	frequency=1	major_base=A	major_cov=9/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/9
RA	520	.	NC_000913	68468	0	C	T	consensus_score=150.3	frequency=1	major_base=T	major_cov=28/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/13
RA	521	.	NC_000913	68476	0	A	G	consensus_score=143.3	frequency=1	major_base=G	major_cov=28/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/13
RA	522	.	NC_000913	68519	0	A	G	bias_e_value=3395330	bias_p_value=0.731491	consensus_score=153.0	fisher_strand_p_value=0.363636	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=28/15	major_frequency=9.773e-01	minor_base=T	minor_cov=0/1	new_cov=28/15	polymorphism_frequency=9.773e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/16
RA	523	.	NC_000913	68678	0	T	C	consensus_score=146.3	frequency=1	major_base=C	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	524	.	NC_000913	68693	0	A	G	consensus_score=155.2	frequency=1	major_base=G	major_cov=28/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/16
RA	525	.	NC_000913	68837	0	C	T	consensus_score=148.3	frequency=1	major_base=T	major_cov=25/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/19
RA	526	.	NC_000913	68840	0	T	C	consensus_score=156.5	frequency=1	major_base=C	major_cov=25/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/19
RA	527	.	NC_000913	68842	0	T	A	consensus_score=145.8	frequency=1	major_base=A	major_cov=25/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/19
RA	528	.	NC_000913	68846	0	G	A	consensus_score=139.5	frequency=1	major_base=A	major_cov=25/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/19
RA	529	.	NC_000913	68849	0	G	A	consensus_score=140.1	frequency=1	major_base=A	major_cov=25/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/19
RA	530	.	NC_000913	68956	0	T	C	consensus_score=211.5	frequency=1	major_base=C	major_cov=22/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/37
RA	531	.	NC_000913	69001	0	C	T	consensus_score=204.0	frequency=1	major_base=T	major_cov=21/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/37
RA	532	.	NC_000913	69014	0	A	G	consensus_score=224.0	frequency=1	major_base=G	major_cov=23/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/39
RA	533	.	NC_000913	69323	0	A	G	consensus_score=192.7	frequency=1	major_base=G	major_cov=29/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/24
RA	534	.	NC_000913	69400	0	G	A	consensus_score=156.4	frequency=1	major_base=A	major_cov=26/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/23
RA	535	.	NC_000913	69605	0	A	G	consensus_score=176.8	frequency=1	major_base=G	major_cov=24/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/27
RA	536	.	NC_000913	69611	0	G	A	consensus_score=176.0	frequency=1	major_base=A	major_cov=24/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/28
RA	537	.	NC_000913	69629	0	G	A	consensus_score=166.3	frequency=1	major_base=A	major_cov=24/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/25
RA	538	.	NC_000913	69665	0	C	.	consensus_score=226.8	frequency=1	major_base=.	major_cov=22/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/26
RA	539	.	NC_000913	69672	1	.	T	bias_e_value=4641650	bias_p_value=1	consensus_score=153.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=22/26	major_frequency=9.796e-01	minor_base=.	minor_cov=0/1	new_cov=22/26	polymorphism_frequency=9.796e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=0/1	total_cov=22/27
RA	540	.	NC_000913	69752	0	T	A	consensus_score=181.9	frequency=1	major_base=A	major_cov=24/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/29
RA	541	.	NC_000913	69935	0	C	T	bias_e_value=3719040	bias_p_value=0.801231	consensus_score=274.7	fisher_strand_p_value=0.44	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=42/32	major_frequency=9.867e-01	minor_base=G	minor_cov=0/1	new_cov=42/32	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/33
RA	542	.	NC_000913	69981	0	G	C	consensus_score=293.4	frequency=1	major_base=C	major_cov=52/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/28
RA	543	.	NC_000913	69983	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=270.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=51/28	major_frequency=9.875e-01	minor_base=A	minor_cov=1/0	new_cov=51/28	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=52/28
RA	544	.	NC_000913	70289	0	G	T	consensus_score=415.9	frequency=1	major_base=T	major_cov=53/63	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/63	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/63
RA	545	.	NC_000913	70371	0	T	C	consensus_score=370.2	frequency=1	major_base=C	major_cov=49/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/54
RA	546	.	NC_000913	70434	0	C	T	consensus_score=367.6	frequency=1	major_base=T	major_cov=49/53	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/53	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/53
RA	547	.	NC_000913	70581	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=267.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=36/39	major_frequency=9.868e-01	minor_base=C	minor_cov=0/1	new_cov=36/39	polymorphism_frequency=9.868e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=36/40
RA	548	.	NC_000913	70740	0	T	G	consensus_score=274.5	frequency=1	major_base=G	major_cov=36/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/40
RA	549	.	NC_000913	71079	0	C	T	consensus_score=302.2	frequency=1	major_base=T	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	550	.	NC_000913	71082	0	T	C	consensus_score=322.5	frequency=1	major_base=C	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	551	.	NC_000913	71085	0	T	C	consensus_score=320.6	frequency=1	major_base=C	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	552	.	NC_000913	71109	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=317.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=46/40	major_frequency=9.885e-01	minor_base=A	minor_cov=1/0	new_cov=46/40	polymorphism_frequency=9.885e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/40
RA	553	.	NC_000913	71175	0	A	G	consensus_score=292.8	frequency=1	major_base=G	major_cov=40/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/41
RA	554	.	NC_000913	71214	0	T	C	consensus_score=315.6	frequency=1	major_base=C	major_cov=37/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/51
RA	555	.	NC_000913	71386	0	C	T	consensus_score=265.2	frequency=1	major_base=T	major_cov=34/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/44
RA	556	.	NC_000913	71543	0	A	G	consensus_score=299.8	frequency=1	major_base=G	major_cov=45/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	557	.	NC_000913	71545	0	T	C	consensus_score=297.0	frequency=1	major_base=C	major_cov=45/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	558	.	NC_000913	71548	0	C	T	bias_e_value=3804260	bias_p_value=0.819591	consensus_score=287.5	fisher_strand_p_value=0.464286	frequency=1	ks_quality_p_value=0.997422	major_base=T	major_cov=45/38	major_frequency=9.881e-01	minor_base=.	minor_cov=0/1	new_cov=45/38	polymorphism_frequency=9.881e-01	polymorphism_score=-3.3	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	559	.	NC_000913	71551	0	C	T	bias_e_value=2514490	bias_p_value=0.541723	consensus_score=288.8	fisher_strand_p_value=0.212565	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=45/37	major_frequency=9.762e-01	minor_base=G	minor_cov=0/2	new_cov=45/37	polymorphism_frequency=9.762e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	560	.	NC_000913	71552	0	T	C	bias_e_value=3826360	bias_p_value=0.824352	consensus_score=297.1	fisher_strand_p_value=0.46988	frequency=1	ks_quality_p_value=0.998825	major_base=C	major_cov=44/38	major_frequency=9.880e-01	minor_base=T	minor_cov=0/1	new_cov=44/38	polymorphism_frequency=9.880e-01	polymorphism_score=-5.9	prediction=consensus	ref_cov=0/1	total_cov=45/39
RA	561	.	NC_000913	71555	0	A	C	bias_e_value=4636680	bias_p_value=0.998928	consensus_score=295.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.954051	major_base=C	major_cov=44/38	major_frequency=9.762e-01	minor_base=A	minor_cov=1/1	new_cov=44/38	polymorphism_frequency=9.762e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=1/1	total_cov=45/39
RA	562	.	NC_000913	71569	0	T	C	consensus_score=306.2	frequency=1	major_base=C	major_cov=46/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/39
RA	563	.	NC_000913	71572	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=294.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=45/39	major_frequency=9.882e-01	minor_base=A	minor_cov=1/0	new_cov=45/39	polymorphism_frequency=9.882e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/39
RA	564	.	NC_000913	71584	0	T	C	consensus_score=321.1	frequency=1	major_base=C	major_cov=48/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/41
RA	565	.	NC_000913	71639	0	C	T	bias_e_value=3909990	bias_p_value=0.84237	consensus_score=246.8	fisher_strand_p_value=0.493987	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=39/39	major_frequency=9.750e-01	minor_base=C	minor_cov=0/2	new_cov=39/39	polymorphism_frequency=9.750e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/2	total_cov=39/41
RA	566	.	NC_000913	71644	0	T	C	consensus_score=285.7	frequency=1	major_base=C	major_cov=39/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/42
RA	567	.	NC_000913	71701	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=226.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=35/32	major_frequency=9.853e-01	minor_base=A	minor_cov=1/0	new_cov=35/32	polymorphism_frequency=9.853e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/32
RA	568	.	NC_000913	71764	0	T	A	consensus_score=186.2	frequency=1	major_base=A	major_cov=29/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/31
RA	569	.	NC_000913	71770	0	T	C	consensus_score=209.9	frequency=1	major_base=C	major_cov=27/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/32
RA	570	.	NC_000913	71806	0	G	A	consensus_score=166.7	frequency=1	major_base=A	major_cov=26/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/28
RA	571	.	NC_000913	71824	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=179.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=24/28	major_frequency=9.811e-01	minor_base=G	minor_cov=0/1	new_cov=24/28	polymorphism_frequency=9.811e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/29
RA	572	.	NC_000913	71857	0	T	A	bias_e_value=3509920	bias_p_value=0.75618	consensus_score=175.0	fisher_strand_p_value=0.388889	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=20/33	major_frequency=9.815e-01	minor_base=C	minor_cov=1/0	new_cov=20/33	polymorphism_frequency=9.815e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/33
RA	573	.	NC_000913	71875	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=173.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=19/33	major_frequency=9.811e-01	minor_base=A	minor_cov=0/1	new_cov=19/33	polymorphism_frequency=9.811e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/34
RA	574	.	NC_000913	71899	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=169.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=15/33	major_frequency=9.796e-01	minor_base=A	minor_cov=0/1	new_cov=15/33	polymorphism_frequency=9.796e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=15/34
RA	575	.	NC_000913	71902	0	A	G	bias_e_value=4641520	bias_p_value=0.999971	consensus_score=165.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.992376	major_base=G	major_cov=15/33	major_frequency=9.796e-01	minor_base=T	minor_cov=0/1	new_cov=15/33	polymorphism_frequency=9.796e-01	polymorphism_score=-6.2	prediction=consensus	ref_cov=0/0	total_cov=15/34
RA	576	.	NC_000913	71908	0	G	A	consensus_score=162.3	frequency=1	major_base=A	major_cov=15/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/34
RA	577	.	NC_000913	71912	0	T	G	consensus_score=173.9	frequency=1	major_base=G	major_cov=15/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/33
RA	578	.	NC_000913	71962	0	G	A	consensus_score=164.1	frequency=1	major_base=A	major_cov=18/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/30
RA	579	.	NC_000913	71965	0	T	C	consensus_score=166.2	frequency=1	major_base=C	major_cov=18/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/30
RA	580	.	NC_000913	71968	0	C	T	consensus_score=159.5	frequency=1	major_base=T	major_cov=18/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/30
RA	581	.	NC_000913	71974	0	G	A	consensus_score=171.9	frequency=1	major_base=A	major_cov=17/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/34
RA	582	.	NC_000913	71989	0	C	G	consensus_score=166.9	frequency=1	major_base=G	major_cov=13/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/34
RA	583	.	NC_000913	71995	0	T	C	consensus_score=167.7	frequency=1	major_base=C	major_cov=13/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/34
RA	584	.	NC_000913	72117	0	A	G	consensus_score=173.6	frequency=1	major_base=G	major_cov=19/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/30
RA	585	.	NC_000913	72121	0	A	T	consensus_score=160.6	frequency=1	major_base=T	major_cov=19/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/30
RA	586	.	NC_000913	72151	0	T	G	consensus_score=150.8	frequency=1	major_base=G	major_cov=18/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/25
RA	587	.	NC_000913	72152	0	G	A	consensus_score=146.0	frequency=1	major_base=A	major_cov=18/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/25
RA	588	.	NC_000913	72183	0	A	G	consensus_score=150.1	frequency=1	major_base=G	major_cov=21/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/20
RA	589	.	NC_000913	72184	0	C	T	consensus_score=145.8	frequency=1	major_base=T	major_cov=21/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/20
RA	590	.	NC_000913	72202	0	C	T	consensus_score=139.4	frequency=1	major_base=T	major_cov=21/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/19
RA	591	.	NC_000913	72217	0	C	T	consensus_score=128.3	frequency=1	major_base=T	major_cov=19/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/18
RA	592	.	NC_000913	72253	0	C	T	consensus_score=130.3	frequency=1	major_base=T	major_cov=21/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/16
RA	593	.	NC_000913	72290	0	A	T	bias_e_value=3657660	bias_p_value=0.788009	consensus_score=106.9	fisher_strand_p_value=0.424242	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=19/13	major_frequency=9.697e-01	minor_base=C	minor_cov=0/1	new_cov=19/13	polymorphism_frequency=9.697e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/14
RA	594	.	NC_000913	72322	0	T	C	consensus_score=108.2	frequency=1	major_base=C	major_cov=17/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/13
RA	595	.	NC_000913	72325	0	T	C	consensus_score=104.4	frequency=1	major_base=C	major_cov=17/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/13
RA	596	.	NC_000913	72349	0	C	G	consensus_score=89.9	frequency=1	major_base=G	major_cov=17/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/11
RA	597	.	NC_000913	72361	0	G	A	consensus_score=108.8	frequency=1	major_base=A	major_cov=25/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/8
RA	598	.	NC_000913	72367	0	C	T	consensus_score=119.7	frequency=1	major_base=T	major_cov=25/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/9
RA	599	.	NC_000913	72381	0	G	A	consensus_score=129.6	frequency=1	major_base=A	major_cov=29/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/9
RA	600	.	NC_000913	72423	0	A	G	consensus_score=137.4	frequency=1	major_base=G	major_cov=25/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/14
RA	601	.	NC_000913	72493	0	T	C	consensus_score=172.9	frequency=1	major_base=C	major_cov=26/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/23
RA	602	.	NC_000913	72517	0	T	G	consensus_score=174.3	frequency=1	major_base=G	major_cov=28/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/22
RA	603	.	NC_000913	72547	0	C	A	consensus_score=175.8	frequency=1	major_base=A	major_cov=28/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/23
RA	604	.	NC_000913	72605	0	C	T	consensus_score=194.8	frequency=1	major_base=T	major_cov=31/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/24
RA	605	.	NC_000913	72614	0	A	G	consensus_score=193.0	frequency=1	major_base=G	major_cov=33/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/22
RA	606	.	NC_000913	72661	0	T	C	consensus_score=165.1	frequency=1	major_base=C	major_cov=26/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/22
RA	607	.	NC_000913	72676	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=155.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=25/22	major_frequency=9.792e-01	minor_base=G	minor_cov=1/0	new_cov=25/22	polymorphism_frequency=9.792e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=26/22
RA	608	.	NC_000913	72691	0	C	T	consensus_score=190.6	frequency=1	major_base=T	major_cov=29/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/23
RA	609	.	NC_000913	72731	0	A	G	consensus_score=180.6	frequency=1	major_base=G	major_cov=31/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/20
RA	610	.	NC_000913	72733	0	A	C	consensus_score=180.8	frequency=1	major_base=C	major_cov=31/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/20
RA	611	.	NC_000913	72736	0	T	G	consensus_score=183.1	frequency=1	major_base=G	major_cov=31/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/20
RA	612	.	NC_000913	72745	0	T	A	consensus_score=182.7	frequency=1	major_base=A	major_cov=37/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/21
RA	613	.	NC_000913	72751	0	A	G	consensus_score=207.7	frequency=1	major_base=G	major_cov=37/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/23
RA	614	.	NC_000913	72799	0	A	G	bias_e_value=3599180	bias_p_value=0.775409	consensus_score=211.5	fisher_strand_p_value=0.409836	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=36/24	major_frequency=9.836e-01	minor_base=A	minor_cov=0/1	new_cov=36/24	polymorphism_frequency=9.836e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=36/25
RA	615	.	NC_000913	72820	0	C	T	consensus_score=236.6	frequency=1	major_base=T	major_cov=38/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/27
RA	616	.	NC_000913	72862	0	C	T	consensus_score=276.1	frequency=1	major_base=T	major_cov=45/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/31
RA	617	.	NC_000913	72892	0	G	T	consensus_score=280.6	frequency=1	major_base=T	major_cov=46/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/31
RA	618	.	NC_000913	72928	0	T	C	consensus_score=290.3	frequency=1	major_base=C	major_cov=46/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/35
RA	619	.	NC_000913	72974	0	C	T	consensus_score=285.3	frequency=1	major_base=T	major_cov=43/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/37
RA	620	.	NC_000913	73001	0	A	G	consensus_score=282.9	frequency=1	major_base=G	major_cov=42/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/38
RA	621	.	NC_000913	73115	0	T	G	bias_e_value=4641650	bias_p_value=1	consensus_score=239.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=29/39	major_frequency=9.855e-01	minor_base=T	minor_cov=0/1	new_cov=29/39	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=29/40
RA	622	.	NC_000913	73121	0	G	A	consensus_score=226.4	frequency=1	major_base=A	major_cov=29/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/40
RA	623	.	NC_000913	73163	0	C	G	bias_e_value=3402090	bias_p_value=0.732948	consensus_score=215.3	fisher_strand_p_value=0.365079	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=22/40	major_frequency=9.841e-01	minor_base=C	minor_cov=1/0	new_cov=22/40	polymorphism_frequency=9.841e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=1/0	total_cov=23/40
RA	624	.	NC_000913	73178	0	T	C	consensus_score=227.6	frequency=1	major_base=C	major_cov=20/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/46
RA	625	.	NC_000913	73193	0	C	G	bias_e_value=4641650	bias_p_value=1	consensus_score=232.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=21/45	major_frequency=9.706e-01	minor_base=A	minor_cov=0/2	new_cov=21/45	polymorphism_frequency=9.706e-01	polymorphism_score=-4.8	prediction=consensus	ref_cov=0/0	total_cov=21/47
RA	626	.	NC_000913	73208	0	T	C	consensus_score=260.4	frequency=1	major_base=C	major_cov=22/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/51
RA	627	.	NC_000913	73214	0	G	A	consensus_score=238.7	frequency=1	major_base=A	major_cov=20/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/50
RA	628	.	NC_000913	73253	0	C	T	consensus_score=231.7	frequency=1	major_base=T	major_cov=23/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/44
RA	629	.	NC_000913	73319	0	T	C	consensus_score=202.7	frequency=1	major_base=C	major_cov=18/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/39
RA	630	.	NC_000913	73328	0	G	A	consensus_score=194.8	frequency=1	major_base=A	major_cov=19/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/36
RA	631	.	NC_000913	73331	0	A	G	consensus_score=197.2	frequency=1	major_base=G	major_cov=19/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/36
RA	632	.	NC_000913	73413	0	A	G	consensus_score=173.4	frequency=1	major_base=G	major_cov=23/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/25
RA	633	.	NC_000913	73445	0	C	A	consensus_score=160.7	frequency=1	major_base=A	major_cov=22/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/23
RA	634	.	NC_000913	73582	0	C	G	consensus_score=153.0	frequency=1	major_base=G	major_cov=26/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/16
RA	635	.	NC_000913	73604	0	T	C	consensus_score=168.2	frequency=1	major_base=C	major_cov=29/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/19
RA	636	.	NC_000913	73712	0	G	T	consensus_score=156.6	frequency=1	major_base=T	major_cov=27/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/21
RA	637	.	NC_000913	73744	0	A	G	bias_e_value=3514040	bias_p_value=0.757068	consensus_score=197.9	fisher_strand_p_value=0.389831	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=36/22	major_frequency=9.831e-01	minor_base=A	minor_cov=0/1	new_cov=36/22	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=36/23
RA	638	.	NC_000913	73753	0	G	A	consensus_score=192.3	frequency=1	major_base=A	major_cov=36/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/21
RA	639	.	NC_000913	73763	0	G	A	consensus_score=213.7	frequency=1	major_base=A	major_cov=38/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/24
RA	640	.	NC_000913	73777	0	G	T	consensus_score=239.1	frequency=1	major_base=T	major_cov=44/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/24
RA	641	.	NC_000913	73790	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=225.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=41/23	major_frequency=9.697e-01	minor_base=T	minor_cov=1/1	new_cov=41/23	polymorphism_frequency=9.697e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/1	total_cov=42/24
RA	642	.	NC_000913	73853	0	C	T	consensus_score=249.6	frequency=1	major_base=T	major_cov=43/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/31
RA	643	.	NC_000913	73868	0	C	G	bias_e_value=3644910	bias_p_value=0.785262	consensus_score=255.9	fisher_strand_p_value=0.421053	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=44/31	major_frequency=9.868e-01	minor_base=A	minor_cov=0/1	new_cov=44/31	polymorphism_frequency=9.868e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/32
RA	644	.	NC_000913	73919	0	C	T	consensus_score=279.0	frequency=1	major_base=T	major_cov=44/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/36
RA	645	.	NC_000913	73984	0	T	C	bias_e_value=1700600	bias_p_value=0.366378	consensus_score=290.9	fisher_strand_p_value=0.11623	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=39/43	major_frequency=9.535e-01	minor_base=A	minor_cov=4/0	new_cov=39/43	polymorphism_frequency=9.535e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/43
RA	646	.	NC_000913	73985	0	A	G	bias_e_value=3910860	bias_p_value=0.842557	consensus_score=297.1	fisher_strand_p_value=0.494253	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=44/42	major_frequency=9.885e-01	minor_base=A	minor_cov=0/1	new_cov=44/42	polymorphism_frequency=9.885e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=44/43
RA	647	.	NC_000913	74009	0	T	C	consensus_score=284.6	frequency=1	major_base=C	major_cov=41/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/40
RA	648	.	NC_000913	74015	0	C	T	consensus_score=265.9	frequency=1	major_base=T	major_cov=39/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/39
RA	649	.	NC_000913	74027	0	G	A	consensus_score=250.6	frequency=1	major_base=A	major_cov=32/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/42
RA	650	.	NC_000913	74069	0	C	T	consensus_score=195.5	frequency=1	major_base=T	major_cov=22/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/39
RA	651	.	NC_000913	74081	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=197.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=22/39	major_frequency=9.839e-01	minor_base=G	minor_cov=0/1	new_cov=22/39	polymorphism_frequency=9.839e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/40
RA	652	.	NC_000913	74084	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=213.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=22/39	major_frequency=9.839e-01	minor_base=A	minor_cov=0/1	new_cov=22/39	polymorphism_frequency=9.839e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=22/40
RA	653	.	NC_000913	74087	0	G	C	consensus_score=219.5	frequency=1	major_base=C	major_cov=22/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/40
RA	654	.	NC_000913	74204	0	G	A	bias_e_value=3126020	bias_p_value=0.67347	consensus_score=195.6	fisher_strand_p_value=0.310345	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=17/40	major_frequency=9.828e-01	minor_base=C	minor_cov=1/0	new_cov=17/40	polymorphism_frequency=9.828e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/40
RA	655	.	NC_000913	74209	0	A	G	consensus_score=205.2	frequency=1	major_base=G	major_cov=18/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/39
RA	656	.	NC_000913	74222	0	C	T	consensus_score=194.7	frequency=1	major_base=T	major_cov=18/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/39
RA	657	.	NC_000913	74234	0	A	G	consensus_score=186.8	frequency=1	major_base=G	major_cov=18/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/36
RA	658	.	NC_000913	74308	0	T	C	consensus_score=217.4	frequency=1	major_base=C	major_cov=29/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/31
RA	659	.	NC_000913	74321	0	T	C	consensus_score=203.6	frequency=1	major_base=C	major_cov=30/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/27
RA	660	.	NC_000913	75707	0	C	T	consensus_score=247.8	frequency=1	major_base=T	major_cov=38/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/40
RA	661	.	NC_000913	75752	0	C	.	bias_e_value=4632150	bias_p_value=0.997954	consensus_score=237.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.936716	major_base=.	major_cov=31/25	major_frequency=9.492e-01	minor_base=G	minor_cov=2/1	new_cov=31/25	polymorphism_frequency=9.492e-01	polymorphism_score=4.9	prediction=consensus	ref_cov=0/0	total_cov=33/26
RA	662	.	NC_000913	75753	0	A	G	bias_e_value=4641640	bias_p_value=0.999998	consensus_score=191.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998186	major_base=G	major_cov=31/25	major_frequency=9.492e-01	minor_base=A	minor_cov=2/1	new_cov=31/25	polymorphism_frequency=9.492e-01	polymorphism_score=-1.7	prediction=consensus	ref_cov=2/1	total_cov=33/26
RA	663	.	NC_000913	75757	1	.	G	bias_e_value=4641650	bias_p_value=1	consensus_score=186.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=31/25	major_frequency=9.492e-01	minor_base=.	minor_cov=2/1	new_cov=31/25	polymorphism_frequency=9.492e-01	polymorphism_score=3.7	prediction=consensus	ref_cov=2/1	total_cov=33/26
RA	664	.	NC_000913	75758	0	T	C	consensus_score=189.5	frequency=1	major_base=C	major_cov=33/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/26
RA	665	.	NC_000913	75767	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=189.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=34/26	major_frequency=9.836e-01	minor_base=G	minor_cov=1/0	new_cov=34/26	polymorphism_frequency=9.836e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/26
RA	666	.	NC_000913	75806	0	A	G	consensus_score=240.3	frequency=1	major_base=G	major_cov=36/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/31
RA	667	.	NC_000913	75812	0	C	T	consensus_score=226.2	frequency=1	major_base=T	major_cov=36/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/33
RA	668	.	NC_000913	75830	0	A	G	bias_e_value=3905230	bias_p_value=0.841345	consensus_score=237.8	fisher_strand_p_value=0.492537	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=34/32	major_frequency=9.706e-01	minor_base=T	minor_cov=0/2	new_cov=34/32	polymorphism_frequency=9.706e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/34
RA	669	.	NC_000913	75833	0	A	G	consensus_score=235.1	frequency=1	major_base=G	major_cov=34/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/34
RA	670	.	NC_000913	75851	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=230.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=33/34	major_frequency=9.853e-01	minor_base=A	minor_cov=0/1	new_cov=33/34	polymorphism_frequency=9.853e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=33/35
RA	671	.	NC_000913	75854	0	G	C	consensus_score=241.0	frequency=1	major_base=C	major_cov=33/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/35
RA	672	.	NC_000913	75860	0	G	A	consensus_score=213.5	frequency=1	major_base=A	major_cov=29/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/35
RA	673	.	NC_000913	75863	0	A	G	consensus_score=222.0	frequency=1	major_base=G	major_cov=29/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/35
RA	674	.	NC_000913	75869	0	T	G	consensus_score=221.4	frequency=1	major_base=G	major_cov=29/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/34
RA	675	.	NC_000913	75875	0	T	C	consensus_score=235.0	frequency=1	major_base=C	major_cov=32/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/35
RA	676	.	NC_000913	75881	0	T	C	bias_e_value=3910590	bias_p_value=0.8425	consensus_score=223.0	fisher_strand_p_value=0.494172	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=31/33	major_frequency=9.697e-01	minor_base=T	minor_cov=0/2	new_cov=31/33	polymorphism_frequency=9.697e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/2	total_cov=31/35
RA	677	.	NC_000913	75887	0	T	C	consensus_score=221.7	frequency=1	major_base=C	major_cov=31/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/32
RA	678	.	NC_000913	75890	0	A	G	bias_e_value=3802160	bias_p_value=0.81914	consensus_score=214.4	fisher_strand_p_value=0.492063	frequency=1	ks_quality_p_value=0.939924	major_base=G	major_cov=30/32	major_frequency=9.841e-01	minor_base=T	minor_cov=1/0	new_cov=30/32	polymorphism_frequency=9.841e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=0/0	total_cov=31/32
RA	679	.	NC_000913	75893	0	T	C	consensus_score=221.1	frequency=1	major_base=C	major_cov=31/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/32
RA	680	.	NC_000913	75899	0	A	C	bias_e_value=4641650	bias_p_value=1	consensus_score=210.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=27/31	major_frequency=9.831e-01	minor_base=T	minor_cov=0/1	new_cov=27/31	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=28/32
RA	681	.	NC_000913	75901	0	C	G	bias_e_value=3793610	bias_p_value=0.817298	consensus_score=213.1	fisher_strand_p_value=0.466667	frequency=1	ks_quality_p_value=0.985975	major_base=G	major_cov=27/32	major_frequency=9.833e-01	minor_base=C	minor_cov=1/0	new_cov=27/32	polymorphism_frequency=9.833e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=1/0	total_cov=28/32
RA	682	.	NC_000913	75902	0	A	C	bias_e_value=3813250	bias_p_value=0.821528	consensus_score=216.9	fisher_strand_p_value=0.466667	frequency=1	ks_quality_p_value=0.997743	major_base=C	major_cov=27/32	major_frequency=9.833e-01	minor_base=A	minor_cov=1/0	new_cov=27/32	polymorphism_frequency=9.833e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=28/32
RA	683	.	NC_000913	75905	0	G	A	consensus_score=214.8	frequency=1	major_base=A	major_cov=28/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/32
RA	684	.	NC_000913	75908	0	G	A	consensus_score=214.6	frequency=1	major_base=A	major_cov=28/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/32
RA	685	.	NC_000913	75920	0	G	C	consensus_score=249.0	frequency=1	major_base=C	major_cov=33/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/36
RA	686	.	NC_000913	75938	0	T	A	bias_e_value=4641650	bias_p_value=1	consensus_score=265.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=33/40	major_frequency=9.865e-01	minor_base=G	minor_cov=0/1	new_cov=33/40	polymorphism_frequency=9.865e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/41
RA	687	.	NC_000913	75950	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=260.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=33/43	major_frequency=9.870e-01	minor_base=A	minor_cov=0/1	new_cov=33/43	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=33/44
RA	688	.	NC_000913	75953	0	T	C	consensus_score=276.1	frequency=1	major_base=C	major_cov=33/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/44
RA	689	.	NC_000913	75966	0	G	T	consensus_score=254.1	frequency=1	major_base=T	major_cov=34/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/44
RA	690	.	NC_000913	75967	0	T	C	consensus_score=269.4	frequency=1	major_base=C	major_cov=34/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/44
RA	691	.	NC_000913	75984	0	T	C	consensus_score=265.2	frequency=1	major_base=C	major_cov=35/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/40
RA	692	.	NC_000913	75985	0	C	T	bias_e_value=3816980	bias_p_value=0.822332	consensus_score=248.4	fisher_strand_p_value=0.466667	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=34/40	major_frequency=9.867e-01	minor_base=C	minor_cov=1/0	new_cov=34/40	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=35/40
RA	693	.	NC_000913	76000	0	T	C	consensus_score=289.4	frequency=1	major_base=C	major_cov=37/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/42
RA	694	.	NC_000913	76082	0	T	C	consensus_score=285.5	frequency=1	major_base=C	major_cov=37/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/42
RA	695	.	NC_000913	76086	0	G	A	consensus_score=290.2	frequency=1	major_base=A	major_cov=37/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/42
RA	696	.	NC_000913	76283	0	C	T	consensus_score=280.1	frequency=1	major_base=T	major_cov=43/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/36
RA	697	.	NC_000913	76334	0	G	A	consensus_score=273.5	frequency=1	major_base=A	major_cov=44/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/37
RA	698	.	NC_000913	76358	0	C	A	consensus_score=257.3	frequency=1	major_base=A	major_cov=40/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/36
RA	699	.	NC_000913	76364	0	G	A	consensus_score=252.3	frequency=1	major_base=A	major_cov=38/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/36
RA	700	.	NC_000913	76478	0	A	G	consensus_score=220.8	frequency=1	major_base=G	major_cov=31/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/34
RA	701	.	NC_000913	76576	0	G	A	consensus_score=226.7	frequency=1	major_base=A	major_cov=32/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/31
RA	702	.	NC_000913	76700	0	A	G	consensus_score=220.6	frequency=1	major_base=G	major_cov=30/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/33
RA	703	.	NC_000913	76727	0	G	A	consensus_score=217.7	frequency=1	major_base=A	major_cov=27/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/32
RA	704	.	NC_000913	76775	0	A	T	consensus_score=182.0	frequency=1	major_base=T	major_cov=26/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/31
RA	705	.	NC_000913	76862	0	G	A	consensus_score=207.8	frequency=1	major_base=A	major_cov=20/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/38
RA	706	.	NC_000913	77021	0	C	T	consensus_score=159.4	frequency=1	major_base=T	major_cov=23/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/25
RA	707	.	NC_000913	77027	0	A	G	consensus_score=164.7	frequency=1	major_base=G	major_cov=23/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/25
RA	708	.	NC_000913	77117	0	G	A	consensus_score=147.6	frequency=1	major_base=A	major_cov=28/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/15
RA	709	.	NC_000913	77776	0	C	A	bias_e_value=4641650	bias_p_value=1	consensus_score=222.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=38/29	major_frequency=9.853e-01	minor_base=G	minor_cov=1/0	new_cov=38/29	polymorphism_frequency=9.853e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/29
RA	710	.	NC_000913	78406	0	A	T	consensus_score=322.1	frequency=1	major_base=T	major_cov=43/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/47
RA	711	.	NC_000913	78520	0	C	A	consensus_score=265.9	frequency=1	major_base=A	major_cov=43/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/40
RA	712	.	NC_000913	78524	0	A	C	bias_e_value=4641650	bias_p_value=1	consensus_score=282.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=42/40	major_frequency=9.880e-01	minor_base=A	minor_cov=1/0	new_cov=42/40	polymorphism_frequency=9.880e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=43/40
RA	713	.	NC_000913	78533	0	A	C	consensus_score=303.9	frequency=1	major_base=C	major_cov=44/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/40
RA	714	.	NC_000913	78761	0	G	A	bias_e_value=3820040	bias_p_value=0.822991	consensus_score=256.9	fisher_strand_p_value=0.467532	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=35/41	major_frequency=9.870e-01	minor_base=C	minor_cov=1/0	new_cov=35/41	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/41
RA	715	.	NC_000913	79040	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=270.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=45/29	major_frequency=9.867e-01	minor_base=A	minor_cov=1/0	new_cov=45/29	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=46/30
RA	716	.	NC_000913	80529	0	C	G	consensus_score=221.5	frequency=1	major_base=G	major_cov=28/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/34
RA	717	.	NC_000913	82633	0	T	G	consensus_score=401.6	frequency=1	major_base=G	major_cov=47/62	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/62	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/62
RA	718	.	NC_000913	82894	0	T	G	consensus_score=279.1	frequency=1	major_base=G	major_cov=41/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/40
RA	719	.	NC_000913	82909	0	C	T	consensus_score=297.8	frequency=1	major_base=T	major_cov=41/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/45
RA	720	.	NC_000913	82933	0	G	A	consensus_score=244.9	frequency=1	major_base=A	major_cov=35/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/41
RA	721	.	NC_000913	82957	0	C	T	consensus_score=237.3	frequency=1	major_base=T	major_cov=27/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/43
RA	722	.	NC_000913	83179	0	C	T	consensus_score=305.6	frequency=1	major_base=T	major_cov=47/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/40
RA	723	.	NC_000913	83182	0	G	A	consensus_score=288.9	frequency=1	major_base=A	major_cov=47/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/40
RA	724	.	NC_000913	83296	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=314.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=51/35	major_frequency=9.885e-01	minor_base=A	minor_cov=1/0	new_cov=51/35	polymorphism_frequency=9.885e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/35
RA	725	.	NC_000913	83317	0	A	G	consensus_score=277.9	frequency=1	major_base=G	major_cov=48/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/33
RA	726	.	NC_000913	83344	0	G	A	consensus_score=253.8	frequency=1	major_base=A	major_cov=43/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/36
RA	727	.	NC_000913	83359	0	C	T	bias_e_value=3688600	bias_p_value=0.794673	consensus_score=292.9	fisher_strand_p_value=0.432099	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=46/34	major_frequency=9.877e-01	minor_base=G	minor_cov=0/1	new_cov=46/34	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/35
RA	728	.	NC_000913	83371	0	G	A	consensus_score=256.2	frequency=1	major_base=A	major_cov=43/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/36
RA	729	.	NC_000913	83383	0	G	A	bias_e_value=3843900	bias_p_value=0.828132	consensus_score=254.1	fisher_strand_p_value=0.474359	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=41/36	major_frequency=9.872e-01	minor_base=G	minor_cov=0/1	new_cov=41/36	polymorphism_frequency=9.872e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=41/37
RA	730	.	NC_000913	84251	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=381.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=48/63	major_frequency=9.911e-01	minor_base=G	minor_cov=0/1	new_cov=48/63	polymorphism_frequency=9.911e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=48/64
RA	731	.	NC_000913	84267	0	G	C	consensus_score=399.3	frequency=1	major_base=C	major_cov=44/65	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/65	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/65
RA	732	.	NC_000913	84305	0	T	C	consensus_score=373.7	frequency=1	major_base=C	major_cov=40/63	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/63	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/63
RA	733	.	NC_000913	84306	0	C	G	bias_e_value=2956520	bias_p_value=0.636954	consensus_score=322.9	fisher_strand_p_value=0.280411	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=40/60	major_frequency=9.709e-01	minor_base=T	minor_cov=0/3	new_cov=40/60	polymorphism_frequency=9.709e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/63
RA	734	.	NC_000913	84415	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=325.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=41/48	major_frequency=9.889e-01	minor_base=A	minor_cov=0/1	new_cov=41/48	polymorphism_frequency=9.889e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=41/49
RA	735	.	NC_000913	85481	0	T	C	bias_e_value=1726760	bias_p_value=0.372015	consensus_score=385.8	fisher_strand_p_value=0.118863	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=54/55	major_frequency=9.646e-01	minor_base=A	minor_cov=4/0	new_cov=54/55	polymorphism_frequency=9.646e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/55
RA	736	.	NC_000913	86241	0	A	G	consensus_score=278.3	frequency=1	major_base=G	major_cov=33/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/44
RA	737	.	NC_000913	86271	0	C	T	consensus_score=274.8	frequency=1	major_base=T	major_cov=29/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/52
RA	738	.	NC_000913	86315	0	C	T	consensus_score=271.8	frequency=1	major_base=T	major_cov=30/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/50
RA	739	.	NC_000913	86345	0	G	C	bias_e_value=1756690	bias_p_value=0.378462	consensus_score=243.1	fisher_strand_p_value=0.121908	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=22/45	major_frequency=9.437e-01	minor_base=A	minor_cov=3/1	new_cov=22/45	polymorphism_frequency=9.437e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=0/0	total_cov=25/46
RA	740	.	NC_000913	86658	0	A	G	consensus_score=290.4	frequency=1	major_base=G	major_cov=48/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/32
RA	741	.	NC_000913	87410	0	C	T	consensus_score=249.2	frequency=1	major_base=T	major_cov=36/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/38
RA	742	.	NC_000913	89089	0	C	A	consensus_score=327.1	frequency=1	major_base=A	major_cov=68/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=68/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=68/28
RA	743	.	NC_000913	89103	0	G	C	bias_e_value=4641650	bias_p_value=1	consensus_score=368.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=71/29	major_frequency=9.901e-01	minor_base=.	minor_cov=1/0	new_cov=71/29	polymorphism_frequency=9.901e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=0/0	total_cov=72/29
RA	744	.	NC_000913	89143	0	A	G	consensus_score=400.7	frequency=1	major_base=G	major_cov=81/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=81/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=81/33
RA	745	.	NC_000913	89145	0	G	T	bias_e_value=2972830	bias_p_value=0.640468	consensus_score=398.9	fisher_strand_p_value=0.283186	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=81/31	major_frequency=9.912e-01	minor_base=G	minor_cov=0/1	new_cov=81/31	polymorphism_frequency=9.912e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=81/33
RA	746	.	NC_000913	89239	0	G	A	consensus_score=398.4	frequency=1	major_base=A	major_cov=70/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=70/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=70/48
RA	747	.	NC_000913	89241	0	C	A	consensus_score=411.6	frequency=1	major_base=A	major_cov=70/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=70/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=70/48
RA	748	.	NC_000913	89263	0	A	G	bias_e_value=3732720	bias_p_value=0.80418	consensus_score=476.5	fisher_strand_p_value=0.443609	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=74/58	major_frequency=9.925e-01	minor_base=A	minor_cov=0/1	new_cov=74/58	polymorphism_frequency=9.925e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=74/59
RA	749	.	NC_000913	89316	0	T	C	consensus_score=498.5	frequency=1	major_base=C	major_cov=66/70	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=66/70	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=66/70
RA	750	.	NC_000913	89321	0	A	G	bias_e_value=596111	bias_p_value=0.128427	consensus_score=381.2	fisher_strand_p_value=0.0280871	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=62/60	major_frequency=9.531e-01	minor_base=T	minor_cov=0/6	new_cov=62/60	polymorphism_frequency=9.531e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=62/66
RA	751	.	NC_000913	89471	0	T	G	consensus_score=421.4	frequency=1	major_base=G	major_cov=41/72	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/72	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/72
RA	752	.	NC_000913	89570	0	A	C	consensus_score=320.2	frequency=1	major_base=C	major_cov=31/57	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/57	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/57
RA	753	.	NC_000913	89699	0	T	C	bias_e_value=3596090	bias_p_value=0.774744	consensus_score=226.2	fisher_strand_p_value=0.409091	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=26/39	major_frequency=9.848e-01	minor_base=A	minor_cov=1/0	new_cov=26/39	polymorphism_frequency=9.848e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/39
RA	754	.	NC_000913	89754	0	T	C	consensus_score=254.9	frequency=1	major_base=C	major_cov=35/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/36
RA	755	.	NC_000913	90432	0	A	G	consensus_score=237.2	frequency=1	major_base=G	major_cov=33/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/33
RA	756	.	NC_000913	90435	0	T	C	bias_e_value=4641640	bias_p_value=0.999998	consensus_score=225.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998137	major_base=C	major_cov=32/33	major_frequency=9.848e-01	minor_base=T	minor_cov=1/0	new_cov=32/33	polymorphism_frequency=9.848e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=1/0	total_cov=33/33
RA	757	.	NC_000913	91904	0	G	A	consensus_score=254.6	frequency=1	major_base=A	major_cov=33/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/40
RA	758	.	NC_000913	91916	0	C	T	consensus_score=248.9	frequency=1	major_base=T	major_cov=32/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/39
RA	759	.	NC_000913	91922	0	G	A	consensus_score=233.9	frequency=1	major_base=A	major_cov=30/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/37
RA	760	.	NC_000913	91949	0	C	T	consensus_score=208.8	frequency=1	major_base=T	major_cov=30/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/32
RA	761	.	NC_000913	92096	0	A	T	consensus_score=231.6	frequency=1	major_base=T	major_cov=32/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/35
RA	762	.	NC_000913	92162	0	C	T	consensus_score=195.1	frequency=1	major_base=T	major_cov=30/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/26
RA	763	.	NC_000913	92327	0	G	T	consensus_score=227.1	frequency=1	major_base=T	major_cov=32/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/32
RA	764	.	NC_000913	92354	0	A	G	consensus_score=219.6	frequency=1	major_base=G	major_cov=28/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/35
RA	765	.	NC_000913	92687	0	A	G	bias_e_value=3820040	bias_p_value=0.822991	consensus_score=277.8	fisher_strand_p_value=0.467532	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=41/35	major_frequency=9.870e-01	minor_base=T	minor_cov=0/1	new_cov=41/35	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/36
RA	766	.	NC_000913	92810	0	T	C	consensus_score=296.5	frequency=1	major_base=C	major_cov=43/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/42
RA	767	.	NC_000913	92843	0	A	G	consensus_score=283.5	frequency=1	major_base=G	major_cov=41/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/38
RA	768	.	NC_000913	94278	0	G	A	bias_e_value=3709480	bias_p_value=0.799172	consensus_score=216.3	fisher_strand_p_value=0.4375	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=27/36	major_frequency=9.844e-01	minor_base=C	minor_cov=1/0	new_cov=27/36	polymorphism_frequency=9.844e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/36
RA	769	.	NC_000913	134256	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=242.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=27/46	major_frequency=9.865e-01	minor_base=G	minor_cov=0/1	new_cov=27/46	polymorphism_frequency=9.865e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=28/47
RA	770	.	NC_000913	141849	0	C	A	bias_e_value=0.0559266	bias_p_value=1.20489e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=194.8	fisher_strand_p_value=5.39323e-10	frequency=2.642e-01	ks_quality_p_value=1	major_base=C	major_cov=29/49	major_frequency=7.358e-01	minor_base=A	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=2.642e-01	polymorphism_score=13.2	prediction=polymorphism	ref_cov=29/49	total_cov=57/50
RA	771	.	NC_000913	246747	0	G	T	consensus_score=432.6	frequency=1	major_base=T	major_cov=61/60	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/60	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/60
RA	772	.	NC_000913	480295	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=350.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=53/51	major_frequency=9.905e-01	minor_base=C	minor_cov=1/0	new_cov=53/51	polymorphism_frequency=9.905e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/51
RA	773	.	NC_000913	480296	0	G	A	consensus_score=354.3	frequency=1	major_base=A	major_cov=54/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=54/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/51
RA	774	.	NC_000913	638920	0	C	A	bias_e_value=1.83007	bias_p_value=3.94272e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=253.2	fisher_strand_p_value=2.11142e-08	frequency=2.313e-01	ks_quality_p_value=1	major_base=C	major_cov=51/52	major_frequency=7.687e-01	minor_base=A	minor_cov=31/0	new_cov=31/0	polymorphism_frequency=2.313e-01	polymorphism_score=13.8	prediction=polymorphism	ref_cov=51/52	total_cov=82/52
RA	775	.	NC_000913	690948	0	G	A	consensus_score=248.4	frequency=1	major_base=A	major_cov=28/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/44
RA	776	.	NC_000913	700038	0	G	A	consensus_score=193.5	frequency=1	major_base=A	major_cov=31/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/30
RA	777	.	NC_000913	780930	0	G	A	bias_e_value=2662060	bias_p_value=0.573516	consensus_reject=FREQUENCY_CUTOFF	consensus_score=63.8	fisher_strand_p_value=0.233798	frequency=2.250e-01	ks_quality_p_value=0.999821	major_base=G	major_cov=9/22	major_frequency=7.750e-01	minor_base=A	minor_cov=5/4	new_cov=5/4	polymorphism_frequency=2.250e-01	polymorphism_score=16.3	prediction=polymorphism	ref_cov=9/22	total_cov=14/26
RA	778	.	NC_000913	780933	0	G	C	bias_e_value=3586600	bias_p_value=0.7727	consensus_reject=FREQUENCY_CUTOFF	consensus_score=78.1	fisher_strand_p_value=0.406812	frequency=2.105e-01	ks_quality_p_value=1	major_base=G	major_cov=9/21	major_frequency=7.895e-01	minor_base=C	minor_cov=4/4	new_cov=4/4	polymorphism_frequency=2.105e-01	polymorphism_score=19.2	prediction=polymorphism	ref_cov=9/21	total_cov=14/26
RA	779	.	NC_000913	780934	0	A	T	bias_e_value=3534330	bias_p_value=0.761438	consensus_reject=FREQUENCY_CUTOFF	consensus_score=77.5	fisher_strand_p_value=0.394499	frequency=2.162e-01	ks_quality_p_value=1	major_base=A	major_cov=8/21	major_frequency=7.838e-01	minor_base=T	minor_cov=4/4	new_cov=4/4	polymorphism_frequency=2.162e-01	polymorphism_score=23.1	prediction=polymorphism	ref_cov=8/21	total_cov=14/25
RA	780	.	NC_000913	809217	0	C	A	consensus_score=204.7	frequency=1	major_base=A	major_cov=32/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/27
RA	781	.	NC_000913	809218	0	A	G	consensus_score=215.0	frequency=1	major_base=G	major_cov=32/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/27
RA	782	.	NC_000913	834674	0	C	A	bias_e_value=32.1769	bias_p_value=6.93221e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=186.8	fisher_strand_p_value=4.43565e-07	frequency=2.708e-01	ks_quality_p_value=1	major_base=C	major_cov=25/45	major_frequency=7.292e-01	minor_base=A	minor_cov=24/2	new_cov=24/2	polymorphism_frequency=2.708e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=25/45	total_cov=49/47
RA	783	.	NC_000913	847955	0	G	A	bias_e_value=1.95368e-05	bias_p_value=4.20902e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=136.8	fisher_strand_p_value=1.37481e-13	frequency=3.391e-01	ks_quality_p_value=1	major_base=G	major_cov=54/22	major_frequency=6.609e-01	minor_base=A	minor_cov=1/38	new_cov=1/38	polymorphism_frequency=3.391e-01	polymorphism_score=51.9	prediction=polymorphism	ref_cov=54/22	total_cov=55/60
RA	784	.	NC_000913	968837	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=218.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=36/32	major_frequency=9.855e-01	minor_base=C	minor_cov=1/0	new_cov=36/32	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/32
RA	785	.	NC_000913	1040126	0	G	T	consensus_score=280.2	frequency=1	major_base=T	major_cov=29/55	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/55	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/55
RA	786	.	NC_000913	1041585	0	C	T	consensus_score=271.2	frequency=1	major_base=T	major_cov=44/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/37
RA	787	.	NC_000913	1061935	0	G	A	bias_e_value=3784590	bias_p_value=0.815355	consensus_score=192.4	fisher_strand_p_value=0.457627	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=26/32	major_frequency=9.831e-01	minor_base=C	minor_cov=1/0	new_cov=26/32	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/32
RA	788	.	NC_000913	1062188	0	C	T	consensus_score=234.0	frequency=1	major_base=T	major_cov=29/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/36
RA	789	.	NC_000913	1086443	0	C	T	consensus_score=344.0	frequency=1	major_base=T	major_cov=53/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/44
RA	790	.	NC_000913	1111727	0	C	T	bias_e_value=3557900	bias_p_value=0.766516	consensus_score=270.9	fisher_strand_p_value=0.4	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=48/31	major_frequency=9.875e-01	minor_base=G	minor_cov=0/1	new_cov=48/31	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/32
RA	791	.	NC_000913	1111728	0	C	T	consensus_score=274.6	frequency=1	major_base=T	major_cov=48/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/32
RA	792	.	NC_000913	1169836	0	A	G	consensus_score=198.0	frequency=1	major_base=G	major_cov=22/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/32
RA	793	.	NC_000913	1189980	0	A	G	consensus_score=244.3	frequency=1	major_base=G	major_cov=35/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/33
RA	794	.	NC_000913	1196220	0	C	T	consensus_score=152.4	frequency=1	major_base=T	major_cov=26/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/24
RA	795	.	NC_000913	1196232	0	C	T	consensus_score=140.7	frequency=1	major_base=T	major_cov=23/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/24
RA	796	.	NC_000913	1196245	0	T	C	consensus_score=125.2	frequency=1	major_base=C	major_cov=19/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/22
RA	797	.	NC_000913	1196247	0	A	G	consensus_score=126.5	frequency=1	major_base=G	major_cov=19/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/22
RA	798	.	NC_000913	1196277	0	C	T	consensus_score=75.3	frequency=1	major_base=T	major_cov=15/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/13
RA	799	.	NC_000913	1196280	0	G	C	consensus_score=76.1	frequency=1	major_base=C	major_cov=15/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/13
RA	800	.	NC_000913	1196283	0	A	G	consensus_score=78.0	frequency=1	major_base=G	major_cov=15/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/13
RA	801	.	NC_000913	1196292	0	C	T	consensus_score=72.3	frequency=1	major_base=T	major_cov=15/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/12
RA	802	.	NC_000913	1196304	0	G	A	consensus_score=55.5	deleted=1	frequency=1	major_base=A	major_cov=12/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/11
RA	803	.	NC_000913	1196316	0	T	A	consensus_score=43.2	deleted=1	frequency=1	major_base=A	major_cov=11/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/8
RA	804	.	NC_000913	1196325	0	A	G	consensus_score=30.9	deleted=1	frequency=1	major_base=G	major_cov=10/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/5
RA	805	.	NC_000913	1196352	0	C	A	consensus_score=18.7	deleted=1	frequency=1	major_base=A	major_cov=6/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/5
RA	806	.	NC_000913	1242609	0	C	T	consensus_score=272.3	frequency=1	major_base=T	major_cov=39/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/43
RA	807	.	NC_000913	1272420	0	C	A	bias_e_value=54.2601	bias_p_value=1.16898e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=198.5	fisher_strand_p_value=7.75729e-07	frequency=2.178e-01	ks_quality_p_value=1	major_base=C	major_cov=36/43	major_frequency=7.822e-01	minor_base=A	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.178e-01	polymorphism_score=13.4	prediction=polymorphism	ref_cov=36/43	total_cov=58/43
RA	808	.	NC_000913	1301992	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=295.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=38/49	major_frequency=9.886e-01	minor_base=G	minor_cov=0/1	new_cov=38/49	polymorphism_frequency=9.886e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/50
RA	809	.	NC_000913	1306736	0	T	G	consensus_score=330.4	frequency=1	major_base=G	major_cov=61/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/30
RA	810	.	NC_000913	1310770	0	A	G	consensus_score=341.2	frequency=1	major_base=G	major_cov=63/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=63/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=63/30
RA	811	.	NC_000913	1337394	0	A	G	consensus_score=306.2	frequency=1	major_base=G	major_cov=58/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=58/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/30
RA	812	.	NC_000913	1351463	0	C	A	bias_e_value=50639.6	bias_p_value=0.0109098	consensus_reject=FREQUENCY_CUTOFF	consensus_score=74.5	fisher_strand_p_value=0.0014473	frequency=3.506e-01	ks_quality_p_value=1	major_base=C	major_cov=36/14	major_frequency=6.494e-01	minor_base=A	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=3.506e-01	polymorphism_score=15.7	prediction=polymorphism	ref_cov=36/14	total_cov=63/14
RA	813	.	NC_000913	1357202	0	C	T	consensus_score=349.4	frequency=1	major_base=T	major_cov=51/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/47
RA	814	.	NC_000913	1358859	0	T	C	consensus_score=301.3	frequency=1	major_base=C	major_cov=44/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/38
RA	815	.	NC_000913	1427992	0	G	T	bias_e_value=49.6782	bias_p_value=1.07027e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=93.1	fisher_strand_p_value=7.05799e-07	frequency=3.908e-01	ks_quality_p_value=1	major_base=G	major_cov=24/29	major_frequency=6.092e-01	minor_base=T	minor_cov=0/34	new_cov=0/34	polymorphism_frequency=3.908e-01	polymorphism_score=10.4	prediction=polymorphism	ref_cov=24/29	total_cov=24/63
RA	816	.	NC_000913	1449738	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=277.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=38/44	major_frequency=9.762e-01	minor_base=G	minor_cov=1/1	new_cov=38/44	polymorphism_frequency=9.762e-01	polymorphism_score=-5.0	prediction=consensus	ref_cov=0/0	total_cov=39/45
RA	817	.	NC_000913	1475514	0	A	G	consensus_score=388.0	frequency=1	major_base=G	major_cov=51/53	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/53	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/53
RA	818	.	NC_000913	1502770	0	T	C	bias_e_value=10.2053	bias_p_value=2.19863e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=152.1	fisher_strand_p_value=1.30466e-07	frequency=2.796e-01	ks_quality_p_value=1	major_base=T	major_cov=37/30	major_frequency=7.204e-01	minor_base=C	minor_cov=0/26	new_cov=0/26	polymorphism_frequency=2.796e-01	polymorphism_score=22.2	prediction=polymorphism	ref_cov=37/30	total_cov=37/56
RA	819	.	NC_000913	1502772	0	G	A	bias_e_value=50.022	bias_p_value=1.07768e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=136.2	fisher_strand_p_value=7.1103e-07	frequency=2.527e-01	ks_quality_p_value=1	major_base=G	major_cov=37/31	major_frequency=7.473e-01	minor_base=A	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=2.527e-01	polymorphism_score=18.0	prediction=polymorphism	ref_cov=37/31	total_cov=37/54
RA	820	.	NC_000913	1643679	0	A	T	consensus_score=214.2	frequency=1	major_base=T	major_cov=28/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/37
RA	821	.	NC_000913	1652331	0	T	C	consensus_score=355.9	frequency=1	major_base=C	major_cov=52/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/47
RA	822	.	NC_000913	1721136	0	C	T	consensus_score=319.3	frequency=1	major_base=T	major_cov=28/66	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/66	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/66
RA	823	.	NC_000913	1776715	0	A	T	consensus_score=325.6	frequency=1	major_base=T	major_cov=50/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/47
RA	824	.	NC_000913	1812509	0	G	T	bias_e_value=1.00008e-10	bias_p_value=2.15458e-17	consensus_reject=FREQUENCY_CUTOFF	consensus_score=285.0	fisher_strand_p_value=4.99429e-19	frequency=3.056e-01	ks_quality_p_value=1	major_base=G	major_cov=74/26	major_frequency=6.944e-01	minor_base=T	minor_cov=0/44	new_cov=0/44	polymorphism_frequency=3.056e-01	polymorphism_score=19.7	prediction=polymorphism	ref_cov=74/26	total_cov=74/70
RA	825	.	NC_000913	1894839	0	T	C	consensus_score=303.3	frequency=1	major_base=C	major_cov=43/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/40
RA	826	.	NC_000913	1978083	1	.	A	bias_e_value=3788460	bias_p_value=0.816188	consensus_score=270.8	fisher_strand_p_value=0.458824	frequency=1	ks_quality_p_value=0.99972	major_base=A	major_cov=38/46	major_frequency=9.882e-01	minor_base=C	minor_cov=1/0	new_cov=38/46	polymorphism_frequency=9.882e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/1	total_cov=39/47
RA	827	.	NC_000913	1987499	0	C	A	consensus_score=240.4	frequency=1	major_base=A	major_cov=41/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/31
RA	828	.	NC_000913	2027332	0	T	A	consensus_score=300.0	frequency=1	major_base=A	major_cov=49/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/38
RA	829	.	NC_000913	2040433	0	C	A	bias_e_value=3726110	bias_p_value=0.802755	consensus_score=283.6	fisher_strand_p_value=0.44186	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=48/37	major_frequency=9.884e-01	minor_base=G	minor_cov=0/1	new_cov=48/37	polymorphism_frequency=9.884e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/38
RA	830	.	NC_000913	2041278	0	G	A	consensus_score=352.0	frequency=1	major_base=A	major_cov=45/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/56
RA	831	.	NC_000913	2052885	0	G	A	consensus_score=416.7	frequency=1	major_base=A	major_cov=60/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=60/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=60/56
RA	832	.	NC_000913	2099525	0	A	T	bias_e_value=3515610	bias_p_value=0.757404	consensus_score=475.7	fisher_strand_p_value=0.395522	frequency=1	ks_quality_p_value=0.986513	major_base=T	major_cov=81/52	major_frequency=9.925e-01	minor_base=C	minor_cov=0/1	new_cov=81/52	polymorphism_frequency=9.925e-01	polymorphism_score=-4.8	prediction=consensus	ref_cov=0/0	total_cov=81/53
RA	833	.	NC_000913	2111259	0	G	.	bias_e_value=4000690	bias_p_value=0.861912	consensus_score=400.0	fisher_strand_p_value=0.532686	frequency=1	ks_quality_p_value=0.981574	major_base=.	major_cov=27/60	major_frequency=9.775e-01	minor_base=G	minor_cov=1/1	new_cov=27/60	polymorphism_frequency=9.775e-01	polymorphism_score=1.3	prediction=consensus	ref_cov=1/1	total_cov=28/61
RA	834	.	NC_000913	2125037	0	G	A	consensus_score=278.8	frequency=1	major_base=A	major_cov=48/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/34
RA	835	.	NC_000913	2173363	0	C	.	bias_e_value=4641570	bias_p_value=0.999982	consensus_score=251.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.993958	major_base=.	major_cov=31/23	major_frequency=9.818e-01	minor_base=C	minor_cov=1/0	new_cov=31/23	polymorphism_frequency=9.818e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=1/0	total_cov=32/23
RA	836	.	NC_000913	2173364	0	C	.	bias_e_value=4631590	bias_p_value=0.997832	consensus_score=250.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.934877	major_base=.	major_cov=31/23	major_frequency=9.818e-01	minor_base=C	minor_cov=1/0	new_cov=31/23	polymorphism_frequency=9.818e-01	polymorphism_score=-2.3	prediction=consensus	ref_cov=1/0	total_cov=32/23
RA	837	.	NC_000913	2188087	0	T	C	consensus_score=462.6	frequency=1	major_base=C	major_cov=69/59	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=69/59	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=69/59
RA	838	.	NC_000913	2339173	0	G	A	consensus_score=287.0	frequency=1	major_base=A	major_cov=39/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/46
RA	839	.	NC_000913	2384808	0	C	T	consensus_score=362.3	frequency=1	major_base=T	major_cov=55/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=55/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/56
RA	840	.	NC_000913	2410419	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=248.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=36/35	major_frequency=9.861e-01	minor_base=G	minor_cov=1/0	new_cov=36/35	polymorphism_frequency=9.861e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=37/35
RA	841	.	NC_000913	2472817	0	C	A	bias_e_value=183.67	bias_p_value=3.95699e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=83.5	fisher_strand_p_value=2.8759e-06	frequency=3.649e-01	ks_quality_p_value=1	major_base=C	major_cov=24/23	major_frequency=6.351e-01	minor_base=A	minor_cov=27/0	new_cov=27/0	polymorphism_frequency=3.649e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=24/23	total_cov=51/23
RA	842	.	NC_000913	2481400	0	T	A	bias_e_value=4641650	bias_p_value=1	consensus_score=342.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=57/45	major_frequency=9.903e-01	minor_base=G	minor_cov=1/0	new_cov=57/45	polymorphism_frequency=9.903e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/45
RA	843	.	NC_000913	2484827	0	C	T	bias_e_value=3773580	bias_p_value=0.812982	consensus_score=425.6	fisher_strand_p_value=0.463415	frequency=1	ks_quality_p_value=0.980991	major_base=T	major_cov=56/66	major_frequency=9.919e-01	minor_base=C	minor_cov=1/0	new_cov=56/66	polymorphism_frequency=9.919e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=1/0	total_cov=57/66
RA	844	.	NC_000913	2579943	0	G	A	bias_e_value=2978120	bias_p_value=0.641608	consensus_score=173.5	fisher_strand_p_value=0.284091	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=32/21	major_frequency=9.464e-01	minor_base=C	minor_cov=3/0	new_cov=32/21	polymorphism_frequency=9.464e-01	polymorphism_score=-7.0	prediction=consensus	ref_cov=0/0	total_cov=35/21
RA	845	.	NC_000913	2757775	0	T	.	consensus_score=729.3	frequency=1	major_base=.	major_cov=67/83	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=67/83	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=67/83
RA	846	.	NC_000913	2767444	0	C	A	bias_e_value=3.47951e-05	bias_p_value=7.49627e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=137.1	fisher_strand_p_value=2.49722e-13	frequency=3.684e-01	ks_quality_p_value=1	major_base=C	major_cov=9/39	major_frequency=6.316e-01	minor_base=A	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=3.684e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=9/39	total_cov=37/39
RA	847	.	NC_000913	2767445	0	C	A	bias_e_value=1.23791e-06	bias_p_value=2.66696e-13	consensus_reject=FREQUENCY_CUTOFF	consensus_score=123.4	fisher_strand_p_value=7.96986e-15	frequency=3.947e-01	ks_quality_p_value=1	major_base=C	major_cov=7/39	major_frequency=6.053e-01	minor_base=A	minor_cov=30/0	new_cov=30/0	polymorphism_frequency=3.947e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=7/39	total_cov=37/39
RA	848	.	NC_000913	2817991	0	A	C	bias_e_value=3135340	bias_p_value=0.67548	consensus_reject=FREQUENCY_CUTOFF	consensus_score=89.3	fisher_strand_p_value=0.312067	frequency=2.340e-01	ks_quality_p_value=1	major_base=A	major_cov=13/23	major_frequency=7.660e-01	minor_base=C	minor_cov=6/5	new_cov=6/5	polymorphism_frequency=2.340e-01	polymorphism_score=17.5	prediction=polymorphism	ref_cov=13/23	total_cov=19/28
RA	849	.	NC_000913	2913471	0	C	A	bias_e_value=92951.2	bias_p_value=0.0200255	consensus_reject=FREQUENCY_CUTOFF	consensus_score=144.3	fisher_strand_p_value=0.00293094	frequency=2.468e-01	ks_quality_p_value=1	major_base=C	major_cov=33/25	major_frequency=7.532e-01	minor_base=A	minor_cov=3/16	new_cov=3/16	polymorphism_frequency=2.468e-01	polymorphism_score=11.9	prediction=polymorphism	ref_cov=33/25	total_cov=36/41
RA	850	.	NC_000913	2926292	0	C	T	bias_e_value=3465030	bias_p_value=0.746507	consensus_score=220.5	fisher_strand_p_value=0.378788	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=41/24	major_frequency=9.848e-01	minor_base=G	minor_cov=0/1	new_cov=41/24	polymorphism_frequency=9.848e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/25
RA	851	.	NC_000913	2990480	0	C	A	bias_e_value=0.373851	bias_p_value=8.05426e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=175.2	fisher_strand_p_value=3.95837e-09	frequency=3.226e-01	ks_quality_p_value=1	major_base=C	major_cov=44/40	major_frequency=6.774e-01	minor_base=A	minor_cov=40/0	new_cov=40/0	polymorphism_frequency=3.226e-01	polymorphism_score=15.5	prediction=polymorphism	ref_cov=44/40	total_cov=84/40
RA	852	.	NC_000913	3024914	0	C	A	bias_e_value=0.0940655	bias_p_value=2.02655e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=216.6	fisher_strand_p_value=9.29778e-10	frequency=2.551e-01	ks_quality_p_value=1	major_base=C	major_cov=24/49	major_frequency=7.449e-01	minor_base=A	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=2.551e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=24/49	total_cov=49/50
RA	853	.	NC_000913	3054886	0	G	T	bias_e_value=0.00584812	bias_p_value=1.25992e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=143.2	fisher_strand_p_value=5.10111e-11	frequency=2.703e-01	ks_quality_p_value=1	major_base=G	major_cov=10/44	major_frequency=7.297e-01	minor_base=T	minor_cov=20/0	new_cov=20/0	polymorphism_frequency=2.703e-01	polymorphism_score=12.7	prediction=polymorphism	ref_cov=10/44	total_cov=30/44
RA	854	.	NC_000913	3088010	0	C	T	bias_e_value=3867120	bias_p_value=0.833135	consensus_score=350.9	fisher_strand_p_value=0.481132	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=55/50	major_frequency=9.906e-01	minor_base=G	minor_cov=0/1	new_cov=55/50	polymorphism_frequency=9.906e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/51
RA	855	.	NC_000913	3088011	0	C	T	bias_e_value=3867120	bias_p_value=0.833135	consensus_score=349.8	fisher_strand_p_value=0.481132	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=55/50	major_frequency=9.906e-01	minor_base=G	minor_cov=0/1	new_cov=55/50	polymorphism_frequency=9.906e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/51
RA	856	.	NC_000913	3223646	0	C	T	consensus_score=277.3	frequency=1	major_base=T	major_cov=44/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/37
RA	857	.	NC_000913	3226224	0	G	T	bias_e_value=1.62706	bias_p_value=3.50534e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=213.0	fisher_strand_p_value=1.86479e-08	frequency=2.407e-01	ks_quality_p_value=1	major_base=G	major_cov=48/34	major_frequency=7.593e-01	minor_base=T	minor_cov=0/26	new_cov=0/26	polymorphism_frequency=2.407e-01	polymorphism_score=10.7	prediction=polymorphism	ref_cov=48/34	total_cov=48/60
RA	858	.	NC_000913	3336411	0	G	A	consensus_score=292.6	frequency=1	major_base=A	major_cov=38/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/45
RA	859	.	NC_000913	3336412	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=275.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=38/44	major_frequency=9.880e-01	minor_base=G	minor_cov=0/1	new_cov=38/44	polymorphism_frequency=9.880e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/45
RA	860	.	NC_000913	3388041	0	T	G	consensus_score=242.5	frequency=1	major_base=G	major_cov=32/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/35
RA	861	.	NC_000913	3474425	0	T	C	consensus_score=254.5	frequency=1	major_base=C	major_cov=44/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/25
RA	862	.	NC_000913	3486175	0	G	A	consensus_score=282.7	frequency=1	major_base=A	major_cov=41/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/43
RA	863	.	NC_000913	3486502	0	C	T	consensus_score=293.1	frequency=1	major_base=T	major_cov=45/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	864	.	NC_000913	3536316	0	T	C	bias_e_value=3795070	bias_p_value=0.817612	consensus_score=271.9	fisher_strand_p_value=0.460526	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=34/41	major_frequency=9.868e-01	minor_base=A	minor_cov=1/0	new_cov=34/41	polymorphism_frequency=9.868e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/41
RA	865	.	NC_000913	3551667	1	.	G	bias_e_value=2005700	bias_p_value=0.432108	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=-0.1	fisher_strand_p_value=0.184244	frequency=4.286e-01	ks_quality_p_value=0.807118	major_base=.	major_cov=6/10	major_frequency=5.714e-01	minor_base=G	minor_cov=1/11	new_cov=1/11	polymorphism_frequency=4.286e-01	polymorphism_score=54.9	prediction=polymorphism	ref_cov=6/10	total_cov=7/22
RA	866	.	NC_000913	3560455	1	.	G	consensus_score=288.6	frequency=1	major_base=G	major_cov=39/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/42
RA	867	.	NC_000913	3623537	0	G	A	bias_e_value=0.755086	bias_p_value=1.62676e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=206.9	fisher_strand_p_value=8.29667e-09	frequency=2.143e-01	ks_quality_p_value=1	major_base=G	major_cov=54/34	major_frequency=7.857e-01	minor_base=A	minor_cov=0/24	new_cov=0/24	polymorphism_frequency=2.143e-01	polymorphism_score=13.7	prediction=polymorphism	ref_cov=54/34	total_cov=54/62
RA	868	.	NC_000913	3623538	0	G	A	bias_e_value=0.155226	bias_p_value=3.3442e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=202.8	fisher_strand_p_value=1.5722e-09	frequency=2.212e-01	ks_quality_p_value=1	major_base=G	major_cov=54/27	major_frequency=7.788e-01	minor_base=A	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=2.212e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=54/27	total_cov=54/62
RA	869	.	NC_000913	3629921	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=189.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=22/33	major_frequency=9.821e-01	minor_base=G	minor_cov=0/1	new_cov=22/33	polymorphism_frequency=9.821e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/34
RA	870	.	NC_000913	3682515	0	C	T	consensus_score=317.5	frequency=1	major_base=T	major_cov=51/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/38
RA	871	.	NC_000913	3707947	0	C	A	consensus_score=314.3	frequency=1	major_base=A	major_cov=70/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=70/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=70/25
RA	872	.	NC_000913	3725176	0	T	G	consensus_score=312.1	frequency=1	major_base=G	major_cov=38/49	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/49	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/49
RA	873	.	NC_000913	3741871	0	G	T	bias_e_value=0.00675481	bias_p_value=1.45526e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=169.4	fisher_strand_p_value=5.92805e-11	frequency=3.085e-01	ks_quality_p_value=1	major_base=G	major_cov=44/21	major_frequency=6.915e-01	minor_base=T	minor_cov=0/29	new_cov=0/29	polymorphism_frequency=3.085e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=44/21	total_cov=44/50
RA	874	.	NC_000913	3761230	0	G	A	consensus_score=182.4	frequency=1	major_base=A	major_cov=28/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/26
RA	875	.	NC_000913	3771979	0	G	T	consensus_score=340.6	frequency=1	major_base=T	major_cov=49/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/54
RA	876	.	NC_000913	3815883	1	.	C	bias_e_value=4641240	bias_p_value=0.999912	consensus_score=264.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.98676	major_base=C	major_cov=28/45	major_frequency=9.865e-01	minor_base=.	minor_cov=0/1	new_cov=28/45	polymorphism_frequency=9.865e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=0/1	total_cov=28/46
RA	877	.	NC_000913	3823162	0	C	T	bias_e_value=4631650	bias_p_value=0.997845	consensus_score=217.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.935071	major_base=T	major_cov=21/44	major_frequency=9.848e-01	minor_base=C	minor_cov=0/1	new_cov=21/44	polymorphism_frequency=9.848e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/1	total_cov=21/45
RA	878	.	NC_000913	3869637	0	C	A	bias_e_value=3455240	bias_p_value=0.7444	consensus_score=272.3	fisher_strand_p_value=0.376623	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=28/48	major_frequency=9.870e-01	minor_base=C	minor_cov=1/0	new_cov=28/48	polymorphism_frequency=9.870e-01	polymorphism_score=-6.5	prediction=consensus	ref_cov=1/0	total_cov=29/48
RA	879	.	NC_000913	3878536	0	G	A	consensus_score=186.3	frequency=1	major_base=A	major_cov=19/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/33
RA	880	.	NC_000913	3896780	0	C	A	bias_e_value=0.329961	bias_p_value=7.10869e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=196.2	fisher_strand_p_value=3.47125e-09	frequency=2.549e-01	ks_quality_p_value=1	major_base=C	major_cov=29/47	major_frequency=7.451e-01	minor_base=A	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=2.549e-01	polymorphism_score=12.5	prediction=polymorphism	ref_cov=29/47	total_cov=55/47
RA	881	.	NC_000913	3906764	0	G	A	bias_e_value=1955440	bias_p_value=0.421281	consensus_score=468.0	fisher_strand_p_value=0.143082	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=49/83	major_frequency=9.851e-01	minor_base=C	minor_cov=2/0	new_cov=49/83	polymorphism_frequency=9.851e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=51/84
RA	882	.	NC_000913	3911533	0	C	A	bias_e_value=0.00143544	bias_p_value=3.09253e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=170.8	fisher_strand_p_value=1.18211e-11	frequency=3.118e-01	ks_quality_p_value=1	major_base=C	major_cov=19/45	major_frequency=6.882e-01	minor_base=A	minor_cov=29/0	new_cov=29/0	polymorphism_frequency=3.118e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=19/45	total_cov=48/45
RA	883	.	NC_000913	3925200	0	T	C	consensus_score=217.6	frequency=1	major_base=C	major_cov=31/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/31
RA	884	.	NC_000913	3926991	0	G	A	consensus_score=350.7	frequency=1	major_base=A	major_cov=62/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=62/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=62/40
RA	885	.	NC_000913	3966530	0	C	T	consensus_score=322.2	frequency=1	major_base=T	major_cov=54/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=54/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/42
RA	886	.	NC_000913	3966531	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=313.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=53/42	major_frequency=9.896e-01	minor_base=C	minor_cov=1/0	new_cov=53/42	polymorphism_frequency=9.896e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=54/42
RA	887	.	NC_000913	4003502	0	G	T	consensus_score=246.6	frequency=1	major_base=T	major_cov=35/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/35
RA	888	.	NC_000913	4015220	0	A	C	consensus_score=198.8	frequency=1	major_base=C	major_cov=27/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/29
RA	889	.	NC_000913	4015225	0	G	T	consensus_score=214.7	frequency=1	major_base=T	major_cov=34/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/27
RA	890	.	NC_000913	4084903	0	T	G	bias_e_value=4641650	bias_p_value=0.999999	consensus_score=143.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998893	major_base=G	major_cov=18/24	major_frequency=9.767e-01	minor_base=T	minor_cov=0/1	new_cov=18/24	polymorphism_frequency=9.767e-01	polymorphism_score=-6.1	prediction=consensus	ref_cov=0/1	total_cov=18/25
RA	891	.	NC_000913	4092703	0	A	G	consensus_score=285.5	frequency=1	major_base=G	major_cov=47/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/32
RA	892	.	NC_000913	4113851	0	G	A	consensus_score=293.4	frequency=1	major_base=A	major_cov=53/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/34
RA	893	.	NC_000913	4143377	0	C	T	bias_e_value=3912980	bias_p_value=0.843014	consensus_score=171.6	fisher_strand_p_value=0.494902	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=26/23	major_frequency=9.608e-01	minor_base=C	minor_cov=2/0	new_cov=26/23	polymorphism_frequency=9.608e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=28/24
RA	894	.	NC_000913	4161248	0	G	T	consensus_score=268.0	frequency=1	major_base=T	major_cov=39/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/42
RA	895	.	NC_000913	4164123	0	C	G	consensus_score=229.2	frequency=1	major_base=G	major_cov=30/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/36
RA	896	.	NC_000913	4215347	0	T	A	consensus_score=353.5	frequency=1	major_base=A	major_cov=55/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=55/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/52
RA	897	.	NC_000913	4223638	0	T	C	bias_e_value=3917810	bias_p_value=0.844055	consensus_score=377.7	fisher_strand_p_value=0.496385	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=54/51	major_frequency=9.813e-01	minor_base=A	minor_cov=2/0	new_cov=54/51	polymorphism_frequency=9.813e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/51
RA	898	.	NC_000913	4282332	1	.	A	bias_e_value=4263490	bias_p_value=0.918528	consensus_score=415.0	fisher_strand_p_value=0.624853	frequency=1	ks_quality_p_value=0.999471	major_base=A	major_cov=65/56	major_frequency=9.680e-01	minor_base=.	minor_cov=3/1	new_cov=65/56	polymorphism_frequency=9.680e-01	polymorphism_score=8.0	prediction=consensus	ref_cov=3/1	total_cov=68/57
RA	899	.	NC_000913	4293781	0	G	A	consensus_score=175.7	frequency=1	major_base=A	major_cov=22/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/31
RA	900	.	NC_000913	4293782	0	C	T	consensus_score=192.7	frequency=1	major_base=T	major_cov=22/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/31
RA	901	.	NC_000913	4296060	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_reject=FREQUENCY_CUTOFF	consensus_score=57.9	fisher_strand_p_value=1	frequency=2.500e-01	ks_quality_p_value=1	major_base=C	major_cov=11/16	major_frequency=7.500e-01	minor_base=T	minor_cov=4/5	new_cov=4/5	polymorphism_frequency=2.500e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=11/16	total_cov=15/21
RA	902	.	NC_000913	4296268	0	T	C	bias_e_value=4343210	bias_p_value=0.935704	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=9.2	fisher_strand_p_value=0.678456	frequency=3.750e-01	ks_quality_p_value=0.978023	major_base=T	major_cov=8/7	major_frequency=6.250e-01	minor_base=C	minor_cov=6/3	new_cov=6/3	polymorphism_frequency=3.750e-01	polymorphism_score=20.0	prediction=polymorphism	ref_cov=8/7	total_cov=14/10
RA	903	.	NC_000913	4296380	1	.	C	bias_e_value=4204870	bias_p_value=0.9059	consensus_score=119.1	fisher_strand_p_value=0.598837	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=22/19	major_frequency=9.318e-01	minor_base=T	minor_cov=1/2	new_cov=22/19	polymorphism_frequency=9.318e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/0	total_cov=24/21
RA	904	.	NC_000913	4296380	2	.	G	bias_e_value=4641650	bias_p_value=0.999999	consensus_score=132.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99899	major_base=G	major_cov=23/21	major_frequency=9.778e-01	minor_base=.	minor_cov=1/0	new_cov=23/21	polymorphism_frequency=9.778e-01	polymorphism_score=-3.0	prediction=consensus	ref_cov=1/0	total_cov=24/21
RA	905	.	NC_000913	4325644	0	C	T	consensus_score=213.7	frequency=1	major_base=T	major_cov=19/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/46
RA	906	.	NC_000913	4392997	0	G	A	consensus_score=317.8	frequency=1	major_base=A	major_cov=38/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/50
RA	907	.	NC_000913	4393552	0	G	A	consensus_score=241.6	frequency=1	major_base=A	major_cov=46/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/27
RA	908	.	NC_000913	4396373	0	C	T	consensus_score=289.2	frequency=1	major_base=T	major_cov=40/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/41
RA	909	.	NC_000913	4396772	0	T	C	bias_e_value=3779530	bias_p_value=0.814263	consensus_score=196.9	fisher_strand_p_value=0.493648	frequency=1	ks_quality_p_value=0.924208	major_base=C	major_cov=29/27	major_frequency=9.655e-01	minor_base=A	minor_cov=2/0	new_cov=29/27	polymorphism_frequency=9.655e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=0/0	total_cov=31/27
RA	910	.	NC_000913	4473900	0	C	T	consensus_score=264.0	frequency=1	major_base=T	major_cov=44/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/39
RA	911	.	NC_000913	4475493	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=478.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=67/66	major_frequency=9.925e-01	minor_base=T	minor_cov=0/1	new_cov=67/66	polymorphism_frequency=9.925e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=67/67
RA	912	.	NC_000913	4508810	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=406.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999458	major_base=T	major_cov=51/70	major_frequency=9.918e-01	minor_base=G	minor_cov=0/1	new_cov=51/70	polymorphism_frequency=9.918e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/71
RA	913	.	NC_000913	4510238	0	T	G	bias_e_value=1728360	bias_p_value=0.372359	consensus_score=400.3	fisher_strand_p_value=0.119024	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=63/59	major_frequency=9.683e-01	minor_base=T	minor_cov=0/4	new_cov=63/59	polymorphism_frequency=9.683e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/4	total_cov=63/63
RA	914	.	NC_000913	4556486	0	C	T	consensus_score=399.6	frequency=1	major_base=T	major_cov=64/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=64/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=64/52
RA	915	.	NC_000913	4561368	0	C	T	consensus_score=248.0	frequency=1	major_base=T	major_cov=41/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/29
RA	916	.	NC_000913	4563778	0	G	.	bias_e_value=976121	bias_p_value=0.210296	consensus_score=295.0	fisher_strand_p_value=0.0536448	frequency=1	ks_quality_p_value=0.998218	major_base=.	major_cov=30/35	major_frequency=9.420e-01	minor_base=G	minor_cov=4/0	new_cov=30/35	polymorphism_frequency=9.420e-01	polymorphism_score=8.0	prediction=consensus	ref_cov=4/0	total_cov=34/35
MC	917	.	NC_000913	257908	258683	768	0	left_inside_cov=0	left_outside_cov=114	right_inside_cov=0	right_outside_cov=113
MC	918	.	NC_000913	275509	372748	0	0	left_inside_cov=0	left_outside_cov=104	right_inside_cov=3	right_outside_cov=107
MC	919	.	NC_000913	1196304	1211440	0	0	left_inside_cov=23	left_outside_cov=27	right_inside_cov=24	right_outside_cov=25
MC	920	.	NC_000913	1978495	1979270	0	0	left_inside_cov=0	left_outside_cov=99	right_inside_cov=0	right_outside_cov=107
MC	921	.	NC_000913	2262279	2268956	0	0	left_inside_cov=0	left_outside_cov=85	right_inside_cov=2	right_outside_cov=87
MC	922	.	NC_000913	3423858	3424444	374	206	left_inside_cov=24	left_outside_cov=26	right_inside_cov=22	right_outside_cov=27
MC	923	.	NC_000913	3708467	3708634	0	0	left_inside_cov=0	left_outside_cov=41	right_inside_cov=24	right_outside_cov=65
MC	924	.	NC_000913	4541024	4542041	0	0	left_inside_cov=0	left_outside_cov=81	right_inside_cov=0	right_outside_cov=100
JC	925	.	NC_000913	1	1	NC_000913	4641652	-1	0	alignment_overlap=0	coverage_minus=57	coverage_plus=55	flanking_left=300	flanking_right=300	frequency=1	ignore=CIRCULAR_CHROMOSOME	junction_possible_overlap_registers=294	key=NC_000913__1__1__NC_000913__4641652__-1__0____300__300__0__0	max_left=292	max_left_minus=292	max_left_plus=233	max_min_left=149	max_min_left_minus=149	max_min_left_plus=148	max_min_right=147	max_min_right_minus=147	max_min_right_plus=134	max_pos_hash_score=590	max_right=284	max_right_minus=269	max_right_plus=284	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.41	new_junction_read_count=116	polymorphism_frequency=1.000e+00	pos_hash_score=63	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=112
JC	926	.	NC_000913	257907	-1	NC_000913	258684	1	0	alignment_overlap=8	coverage_minus=45	coverage_plus=66	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=286	key=NC_000913__257907__-1__NC_000913__258676__1__8____300__300__0__0	max_left=289	max_left_minus=289	max_left_plus=287	max_min_left=143	max_min_left_minus=104	max_min_left_plus=143	max_min_right=138	max_min_right_minus=136	max_min_right_plus=138	max_pos_hash_score=574	max_right=291	max_right_minus=291	max_right_plus=279	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.42	new_junction_read_count=114	polymorphism_frequency=1.000e+00	pos_hash_score=67	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=8	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=286	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=111
JC	927	.	NC_000913	275508	-1	NC_000913	372749	1	0	alignment_overlap=10	coverage_minus=47	coverage_plus=54	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=284	key=NC_000913__275508__-1__NC_000913__372739__1__10____300__300__0__0	max_left=281	max_left_minus=281	max_left_plus=266	max_min_left=142	max_min_left_minus=137	max_min_left_plus=142	max_min_right=140	max_min_right_minus=140	max_min_right_plus=126	max_pos_hash_score=570	max_right=288	max_right_minus=286	max_right_plus=288	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.31	new_junction_read_count=104	polymorphism_frequency=1.000e+00	pos_hash_score=69	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=10	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=284	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=101
JC	928	.	NC_000913	609350	-1	NC_000913	1303314	1	0	alignment_overlap=3	coverage_minus=44	coverage_plus=30	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=291	key=NC_000913__609350__-1__NC_000913__1303311__1__3____300__300__1__0	max_left=296	max_left_minus=285	max_left_plus=296	max_min_left=146	max_min_left_minus=135	max_min_left_plus=146	max_min_right=141	max_min_right_minus=141	max_min_right_plus=86	max_pos_hash_score=584	max_right=292	max_right_minus=292	max_right_plus=292	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.92	new_junction_read_count=75	polymorphism_frequency=9.866e-01	pos_hash_score=48	prediction=consensus	read_count_offset=6	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=3	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.01	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=74
JC	929	.	NC_000913	629003	-1	NC_000913	629483	1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.829e-02	junction_possible_overlap_registers=285	key=NC_000913__629003__-1__NC_000913__629474__1__9____300__300__0__0	max_left=149	max_left_minus=149	max_left_plus=149	max_min_left=18	max_min_left_minus=18	max_min_left_plus=18	max_min_right=61	max_min_right_minus=61	max_min_right_plus=61	max_pos_hash_score=572	max_right=156	max_right_minus=156	max_right_plus=156	neg_log10_pos_hash_p_value=7.1	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=5.829e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.69	side_1_overlap=9	side_1_possible_overlap_registers=294	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.93	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=4
JC	930	.	NC_000913	696466	-1	NC_000913	696793	1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.606e-02	junction_possible_overlap_registers=284	key=NC_000913__696466__-1__NC_000913__696783__1__10____300__300__0__0	max_left=180	max_left_minus=180	max_left_plus=113	max_min_left=94	max_min_left_minus=0	max_min_left_plus=94	max_min_right=110	max_min_right_minus=110	max_min_right_plus=70	max_pos_hash_score=570	max_right=195	max_right_minus=110	max_right_plus=195	neg_log10_pos_hash_p_value=7.6	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=4.606e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.97	side_1_overlap=10	side_1_possible_overlap_registers=294	side_1_read_count=80	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.59	side_2_overlap=0	side_2_possible_overlap_registers=284	side_2_read_count=47	side_2_redundant=0	total_non_overlap_reads=3
JC	931	.	NC_000913	696741	-1	NC_000913	697135	1	0	alignment_overlap=78	coverage_minus=5	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1.628e-01	junction_possible_overlap_registers=216	key=NC_000913__696741__-1__NC_000913__697057__1__78____300__300__0__0	max_left=182	max_left_minus=182	max_left_plus=175	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=106	max_min_right_minus=106	max_min_right_plus=60	max_pos_hash_score=434	max_right=106	max_right_minus=106	max_right_plus=60	neg_log10_pos_hash_p_value=4.1	new_junction_coverage=0.15	new_junction_read_count=9	polymorphism_frequency=1.628e-01	pos_hash_score=8	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.52	side_1_overlap=78	side_1_possible_overlap_registers=294	side_1_read_count=43	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.01	side_2_overlap=0	side_2_possible_overlap_registers=216	side_2_read_count=61	side_2_redundant=0	total_non_overlap_reads=9
JC	932	.	NC_000913	732239	-1	NC_000913	3622029	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=2.059e-01	junction_possible_overlap_registers=282	key=NC_000913__732239__-1__NC_000913__3622017__1__12____300__300__0__0	max_left=171	max_left_minus=124	max_left_plus=171	max_min_left=75	max_min_left_minus=75	max_min_left_plus=0	max_min_right=116	max_min_right_minus=97	max_min_right_plus=116	max_pos_hash_score=566	max_right=213	max_right_minus=213	max_right_plus=116	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=2.059e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.34	side_1_overlap=12	side_1_possible_overlap_registers=294	side_1_read_count=28	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=4
JC	933	.	NC_000913	732239	-1	NC_000913	3765020	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=2.231e-01	junction_possible_overlap_registers=282	key=NC_000913__732239__-1__NC_000913__3765008__1__12____300__300__0__0	max_left=171	max_left_minus=124	max_left_plus=171	max_min_left=75	max_min_left_minus=75	max_min_left_plus=0	max_min_right=116	max_min_right_minus=97	max_min_right_plus=116	max_pos_hash_score=566	max_right=213	max_right_minus=213	max_right_plus=116	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=2.231e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.34	side_1_overlap=12	side_1_possible_overlap_registers=294	side_1_read_count=28	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.01	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=4
JC	934	.	NC_000913	781322	-1	NC_000913	781811	1	0	alignment_overlap=39	coverage_minus=3	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=9.964e-02	junction_possible_overlap_registers=255	key=NC_000913__781322__-1__NC_000913__781772__1__39____300__300__0__0	max_left=129	max_left_minus=129	max_left_plus=129	max_min_left=69	max_min_left_minus=40	max_min_left_plus=69	max_min_right=88	max_min_right_minus=52	max_min_right_plus=88	max_pos_hash_score=512	max_right=140	max_right_minus=140	max_right_plus=105	neg_log10_pos_hash_p_value=5.6	new_junction_coverage=0.08	new_junction_read_count=6	polymorphism_frequency=9.964e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.69	side_1_overlap=39	side_1_possible_overlap_registers=294	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.82	side_2_overlap=0	side_2_possible_overlap_registers=255	side_2_read_count=59	side_2_redundant=0	total_non_overlap_reads=6
JC	935	.	NC_000913	781688	-1	NC_000913	781845	1	0	alignment_overlap=54	coverage_minus=2	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=5.058e-02	junction_possible_overlap_registers=240	key=NC_000913__781688__-1__NC_000913__781791__1__54____300__300__0__0	max_left=167	max_left_minus=167	max_left_plus=91	max_min_left=91	max_min_left_minus=5	max_min_left_plus=91	max_min_right=79	max_min_right_minus=79	max_min_right_plus=0	max_pos_hash_score=482	max_right=241	max_right_minus=241	max_right_plus=155	neg_log10_pos_hash_p_value=6.8	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=5.058e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.75	side_1_overlap=54	side_1_possible_overlap_registers=294	side_1_read_count=62	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.92	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=62	side_2_redundant=0	total_non_overlap_reads=3
JC	936	.	NC_000913	1094245	1	NC_000913	3429990	-1	0	alignment_overlap=1	coverage_minus=49	coverage_plus=36	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__1094245__1__NC_000913__3429991__-1__1____300__300__1__0	max_left=296	max_left_minus=295	max_left_plus=296	max_min_left=145	max_min_left_minus=128	max_min_left_plus=145	max_min_right=140	max_min_right_minus=140	max_min_right_plus=135	max_pos_hash_score=588	max_right=295	max_right_minus=295	max_right_plus=290	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=1.05	new_junction_read_count=86	polymorphism_frequency=1.000e+00	pos_hash_score=52	prediction=consensus	read_count_offset=3	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=1	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=290	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=85
JC	937	.	NC_000913	1166125	-1	NC_000913	1166621	1	0	alignment_overlap=15	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.875e-02	junction_possible_overlap_registers=279	key=NC_000913__1166125__-1__NC_000913__1166606__1__15____300__300__0__0	max_left=99	max_left_minus=99	max_left_plus=99	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=79	max_min_right_minus=79	max_min_right_plus=79	max_pos_hash_score=560	max_right=79	max_right_minus=79	max_right_plus=79	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=5.875e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.91	side_1_overlap=15	side_1_possible_overlap_registers=294	side_1_read_count=75	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.73	side_2_overlap=0	side_2_possible_overlap_registers=279	side_2_read_count=57	side_2_redundant=0	total_non_overlap_reads=4
JC	938	.	NC_000913	1227665	-1	NC_000913	1228049	1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.977e-02	junction_possible_overlap_registers=283	key=NC_000913__1227665__-1__NC_000913__1228038__1__11____300__300__0__0	max_left=110	max_left_minus=110	max_left_plus=110	max_min_left=49	max_min_left_minus=49	max_min_left_plus=0	max_min_right=69	max_min_right_minus=69	max_min_right_plus=69	max_pos_hash_score=568	max_right=76	max_right_minus=76	max_right_plus=69	neg_log10_pos_hash_p_value=6.5	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=4.977e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.32	side_1_overlap=11	side_1_possible_overlap_registers=294	side_1_read_count=109	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.08	side_2_overlap=0	side_2_possible_overlap_registers=283	side_2_read_count=86	side_2_redundant=0	total_non_overlap_reads=5
JC	939	.	NC_000913	1286906	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=9.779e-02	junction_possible_overlap_registers=274	key=NC_000913__1286906__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=263	max_left_minus=263	max_left_plus=243	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=36	max_min_right_minus=36	max_min_right_plus=34	max_pos_hash_score=550	max_right=36	max_right_minus=36	max_right_plus=34	neg_log10_pos_hash_p_value=6.9	new_junction_coverage=0.07	new_junction_read_count=5	polymorphism_frequency=9.779e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.67	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=55	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.53	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=41	side_2_redundant=0	total_non_overlap_reads=5
JC	940	.	NC_000913	1287084	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=5	coverage_plus=6	flanking_left=300	flanking_right=300	frequency=1.836e-01	junction_possible_overlap_registers=274	key=NC_000913__1287084__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=270	max_left_minus=270	max_left_plus=167	max_min_left=127	max_min_left_minus=75	max_min_left_plus=127	max_min_right=113	max_min_right_minus=73	max_min_right_plus=113	max_pos_hash_score=550	max_right=205	max_right_minus=205	max_right_plus=153	neg_log10_pos_hash_p_value=4.2	new_junction_coverage=0.14	new_junction_read_count=11	polymorphism_frequency=1.836e-01	pos_hash_score=11	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.74	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=61	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.53	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=41	side_2_redundant=0	total_non_overlap_reads=11
JC	941	.	NC_000913	1299498	-1	NC_000913	1300698	1	0	alignment_overlap=4	coverage_minus=51	coverage_plus=55	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=290	key=NC_000913__1299498__-1__NC_000913__1300694__1__4____300__300__0__0	max_left=287	max_left_minus=287	max_left_plus=284	max_min_left=146	max_min_left_minus=140	max_min_left_plus=146	max_min_right=140	max_min_right_minus=139	max_min_right_plus=140	max_pos_hash_score=582	max_right=287	max_right_minus=283	max_right_plus=287	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.35	new_junction_read_count=110	polymorphism_frequency=1.000e+00	pos_hash_score=66	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=4	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=290	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=106
JC	942	.	NC_000913	1303319	-1	NC_000913	2514273	1	0	alignment_overlap=4	coverage_minus=24	coverage_plus=44	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=290	key=NC_000913__1303323__-1__NC_000913__2514273__1__4____300__300__0__1	max_left=293	max_left_minus=263	max_left_plus=293	max_min_left=144	max_min_left_minus=99	max_min_left_plus=144	max_min_right=137	max_min_right_minus=135	max_min_right_plus=137	max_pos_hash_score=582	max_right=293	max_right_minus=272	max_right_plus=293	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.84	new_junction_read_count=68	polymorphism_frequency=9.708e-01	pos_hash_score=47	prediction=consensus	read_count_offset=6	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.03	side_1_overlap=0	side_1_possible_overlap_registers=284	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=4	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=68
JC	943	.	NC_000913	1397238	-1	NC_000913	1978494	-1	0	alignment_overlap=0	coverage_minus=43	coverage_plus=51	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1397238__-1__NC_000913__1978494__-1__0____300__300__1__0	max_left=294	max_left_minus=284	max_left_plus=294	max_min_left=141	max_min_left_minus=141	max_min_left_plus=120	max_min_right=138	max_min_right_minus=138	max_min_right_plus=131	max_pos_hash_score=590	max_right=297	max_right_minus=297	max_right_plus=291	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.20	new_junction_read_count=99	polymorphism_frequency=1.000e+00	pos_hash_score=66	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=94
JC	944	.	NC_000913	1399590	1	NC_000913	2101749	1	0	alignment_overlap=0	coverage_minus=47	coverage_plus=53	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1399590__1__NC_000913__2101749__1__0____300__300__0__1	max_left=297	max_left_minus=285	max_left_plus=297	max_min_left=149	max_min_left_minus=149	max_min_left_plus=137	max_min_right=149	max_min_right_minus=149	max_min_right_plus=139	max_pos_hash_score=590	max_right=293	max_right_minus=293	max_right_plus=283	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.22	new_junction_read_count=101	polymorphism_frequency=1.000e+00	pos_hash_score=64	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=290	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=100
JC	945	.	NC_000913	1399593	-1	NC_000913	2290113	-1	0	alignment_overlap=1	coverage_minus=30	coverage_plus=37	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__1399594__-1__NC_000913__2290113__-1__1____300__300__0__1	max_left=297	max_left_minus=291	max_left_plus=297	max_min_left=143	max_min_left_minus=141	max_min_left_plus=143	max_min_right=130	max_min_right_minus=130	max_min_right_plus=115	max_pos_hash_score=588	max_right=292	max_right_minus=292	max_right_plus=287	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.83	new_junction_read_count=68	polymorphism_frequency=1.000e+00	pos_hash_score=45	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=67
JC	946	.	NC_000913	1907577	1	NC_000913	1979270	-1	0	alignment_overlap=0	coverage_minus=32	coverage_plus=33	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1907577__1__NC_000913__1979270__-1__0____300__300__0__1	max_left=292	max_left_minus=281	max_left_plus=292	max_min_left=149	max_min_left_minus=149	max_min_left_plus=146	max_min_right=143	max_min_right_minus=143	max_min_right_plus=140	max_pos_hash_score=590	max_right=283	max_right_minus=280	max_right_plus=283	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.81	new_junction_read_count=67	polymorphism_frequency=1.000e+00	pos_hash_score=41	prediction=consensus	read_count_offset=8	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=286	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=65
JC	947	.	NC_000913	1907584	-1	NC_000913	1978503	1	0	alignment_overlap=0	coverage_minus=48	coverage_plus=46	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1907584__-1__NC_000913__1978503__1__0____300__300__0__1	max_left=296	max_left_minus=296	max_left_plus=266	max_min_left=149	max_min_left_minus=130	max_min_left_plus=149	max_min_right=149	max_min_right_minus=134	max_min_right_plus=149	max_pos_hash_score=590	max_right=297	max_right_minus=297	max_right_plus=289	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.14	new_junction_read_count=94	polymorphism_frequency=1.000e+00	pos_hash_score=62	prediction=consensus	read_count_offset=8	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=286	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=94
JC	948	.	NC_000913	1979270	-1	NC_000913	4541023	-1	0	alignment_overlap=0	coverage_minus=46	coverage_plus=35	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1979270__-1__NC_000913__4541023__-1__0____300__300__1__0	max_left=293	max_left_minus=278	max_left_plus=293	max_min_left=147	max_min_left_minus=147	max_min_left_plus=140	max_min_right=147	max_min_right_minus=147	max_min_right_plus=128	max_pos_hash_score=590	max_right=298	max_right_minus=298	max_right_plus=286	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.99	new_junction_read_count=82	polymorphism_frequency=1.000e+00	pos_hash_score=57	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=81
JC	949	.	NC_000913	1979271	1	NC_000913	2102947	-1	0	alignment_overlap=0	coverage_minus=48	coverage_plus=55	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1979271__1__NC_000913__2102947__-1__0____300__300__0__1	max_left=292	max_left_minus=281	max_left_plus=292	max_min_left=143	max_min_left_minus=143	max_min_left_plus=135	max_min_right=145	max_min_right_minus=145	max_min_right_plus=129	max_pos_hash_score=590	max_right=294	max_right_minus=294	max_right_plus=291	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.30	new_junction_read_count=107	polymorphism_frequency=1.000e+00	pos_hash_score=67	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=103
JC	950	.	NC_000913	2170171	1	NC_000913	3429988	1	0	alignment_overlap=2	coverage_minus=42	coverage_plus=34	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=292	key=NC_000913__2170171__1__NC_000913__3429986__1__2____300__300__1__0	max_left=293	max_left_minus=292	max_left_plus=293	max_min_left=147	max_min_left_minus=145	max_min_left_plus=147	max_min_right=132	max_min_right_minus=120	max_min_right_plus=132	max_pos_hash_score=586	max_right=297	max_right_minus=297	max_right_plus=289	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.94	new_junction_read_count=77	polymorphism_frequency=1.000e+00	pos_hash_score=50	prediction=consensus	read_count_offset=3	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=76
JC	951	.	NC_000913	2200878	-1	NC_000913	2201106	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=1	flanking_left=300	flanking_right=300	frequency=2.895e-02	junction_possible_overlap_registers=282	key=NC_000913__2200878__-1__NC_000913__2201094__1__12____300__300__0__0	max_left=195	max_left_minus=195	max_left_plus=71	max_min_left=81	max_min_left_minus=81	max_min_left_plus=71	max_min_right=93	max_min_right_minus=93	max_min_right_plus=0	max_pos_hash_score=566	max_right=216	max_right_minus=207	max_right_plus=216	neg_log10_pos_hash_p_value=7.6	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=2.895e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.42	side_1_overlap=12	side_1_possible_overlap_registers=294	side_1_read_count=117	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.12	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=89	side_2_redundant=0	total_non_overlap_reads=3
JC	952	.	NC_000913	2262278	-1	NC_000913	2268957	1	0	alignment_overlap=1	coverage_minus=34	coverage_plus=50	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__2262278__-1__NC_000913__2268956__1__1____300__300__0__0	max_left=272	max_left_minus=272	max_left_plus=264	max_min_left=134	max_min_left_minus=134	max_min_left_plus=128	max_min_right=148	max_min_right_minus=148	max_min_right_plus=138	max_pos_hash_score=588	max_right=294	max_right_minus=288	max_right_plus=294	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.03	new_junction_read_count=85	polymorphism_frequency=1.000e+00	pos_hash_score=54	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=1	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=84
JC	953	.	NC_000913	2913392	1	NC_000913	2997691	-1	0	alignment_overlap=0	coverage_minus=38	coverage_plus=43	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2913392__1__NC_000913__2997691__-1__0____300__300__0__1	max_left=295	max_left_minus=285	max_left_plus=295	max_min_left=144	max_min_left_minus=144	max_min_left_plus=127	max_min_right=147	max_min_right_minus=138	max_min_right_plus=147	max_pos_hash_score=590	max_right=296	max_right_minus=296	max_right_plus=292	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.99	new_junction_read_count=82	polymorphism_frequency=1.000e+00	pos_hash_score=55	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=81
JC	954	.	NC_000913	2913396	-1	NC_000913	2996361	1	0	alignment_overlap=0	coverage_minus=35	coverage_plus=45	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2913396__-1__NC_000913__2996361__1__0____300__300__0__1	max_left=298	max_left_minus=298	max_left_plus=294	max_min_left=140	max_min_left_minus=136	max_min_left_plus=140	max_min_right=139	max_min_right_minus=133	max_min_right_plus=139	max_pos_hash_score=590	max_right=298	max_right_minus=289	max_right_plus=298	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.97	new_junction_read_count=80	polymorphism_frequency=1.000e+00	pos_hash_score=53	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=80
JC	955	.	NC_000913	2996361	1	NC_000913	3546574	1	0	alignment_overlap=0	coverage_minus=48	coverage_plus=28	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2996361__1__NC_000913__3546574__1__0____300__300__1__0	max_left=280	max_left_minus=258	max_left_plus=280	max_min_left=144	max_min_left_minus=144	max_min_left_plus=139	max_min_right=150	max_min_right_minus=141	max_min_right_plus=150	max_pos_hash_score=590	max_right=297	max_right_minus=295	max_right_plus=297	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.92	new_junction_read_count=76	polymorphism_frequency=9.868e-01	pos_hash_score=50	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.01	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=76
JC	956	.	NC_000913	3186096	1	NC_000913	3546578	-1	0	alignment_overlap=2	coverage_minus=79	coverage_plus=40	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=292	key=NC_000913__3186096__1__NC_000913__3546580__-1__2____300__300__1__0	max_left=295	max_left_minus=295	max_left_plus=294	max_min_left=141	max_min_left_minus=141	max_min_left_plus=136	max_min_right=147	max_min_right_minus=147	max_min_right_plus=144	max_pos_hash_score=586	max_right=295	max_right_minus=295	max_right_plus=294	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.45	new_junction_read_count=119	polymorphism_frequency=1.000e+00	pos_hash_score=64	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=287	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=119
JC	957	.	NC_000913	3468779	-1	NC_000913	3469104	1	0	alignment_overlap=17	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.796e-02	junction_possible_overlap_registers=277	key=NC_000913__3468779__-1__NC_000913__3469087__1__17____300__300__0__0	max_left=253	max_left_minus=253	max_left_plus=190	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=93	max_min_right_minus=77	max_min_right_plus=93	max_pos_hash_score=556	max_right=93	max_right_minus=77	max_right_plus=93	neg_log10_pos_hash_p_value=6.9	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=4.796e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.09	side_1_overlap=17	side_1_possible_overlap_registers=294	side_1_read_count=90	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.95	side_2_overlap=0	side_2_possible_overlap_registers=277	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=4
JC	958	.	NC_000913	3584195	-1	NC_000913	4542042	1	0	alignment_overlap=0	coverage_minus=52	coverage_plus=47	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__3584195__-1__NC_000913__4542042__1__0____300__300__1__0	max_left=294	max_left_minus=289	max_left_plus=294	max_min_left=149	max_min_left_minus=140	max_min_left_plus=149	max_min_right=149	max_min_right_minus=149	max_min_right_plus=147	max_pos_hash_score=590	max_right=292	max_right_minus=291	max_right_plus=292	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.21	new_junction_read_count=100	polymorphism_frequency=1.000e+00	pos_hash_score=68	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=99
JC	959	.	NC_000913	3621836	-1	NC_000913	3622017	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.104e-01	junction_possible_overlap_registers=282	key=NC_000913__3621848__-1__NC_000913__3622017__1__12____300__300__1__0	max_left=171	max_left_minus=124	max_left_plus=171	max_min_left=75	max_min_left_minus=75	max_min_left_plus=0	max_min_right=116	max_min_right_minus=97	max_min_right_plus=116	max_pos_hash_score=566	max_right=213	max_right_minus=213	max_right_plus=116	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=5.104e-01	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=12	side_2_possible_overlap_registers=294	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=4
JC	960	.	NC_000913	3708466	-1	NC_000913	3708635	1	0	alignment_overlap=108	coverage_minus=20	coverage_plus=21	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=186	key=NC_000913__3708466__-1__NC_000913__3708527__1__108____300__300__0__0	max_left=191	max_left_minus=143	max_left_plus=191	max_min_left=94	max_min_left_minus=94	max_min_left_plus=46	max_min_right=92	max_min_right_minus=91	max_min_right_plus=92	max_pos_hash_score=374	max_right=186	max_right_minus=186	max_right_plus=170	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.79	new_junction_read_count=41	polymorphism_frequency=1.000e+00	pos_hash_score=28	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=108	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=186	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=41
JC	961	.	NC_000913	3764827	-1	NC_000913	3765008	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=282	key=NC_000913__3764839__-1__NC_000913__3765008__1__12____300__300__1__0	max_left=171	max_left_minus=124	max_left_plus=171	max_min_left=75	max_min_left_minus=75	max_min_left_plus=0	max_min_right=116	max_min_right_minus=97	max_min_right_plus=116	max_pos_hash_score=566	max_right=213	max_right_minus=213	max_right_plus=116	neg_log10_pos_hash_p_value=7.0	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=8.066e-01	pos_hash_score=4	prediction=consensus	reject=COVERAGE_EVENNESS_SKEW	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.01	side_2_overlap=12	side_2_possible_overlap_registers=294	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=4
JC	962	.	NC_000913	3822646	1	NC_000913	3822651	-1	0	alignment_overlap=0	coverage_minus=36	coverage_plus=27	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__3822646__1__NC_000913__3822651__-1__0____300__300__0__0	max_left=290	max_left_minus=288	max_left_plus=290	max_min_left=148	max_min_left_minus=148	max_min_left_plus=123	max_min_right=146	max_min_right_minus=146	max_min_right_plus=124	max_pos_hash_score=590	max_right=294	max_right_minus=294	max_right_plus=291	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.79	new_junction_read_count=65	polymorphism_frequency=9.559e-01	pos_hash_score=40	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.01	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.06	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=5	side_2_redundant=0	total_non_overlap_reads=63
JC	963	.	NC_000913	4295870	-1	NC_000913	4296434	1	0	alignment_overlap=39	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=6.683e-02	junction_possible_overlap_registers=255	key=NC_000913__4295870__-1__NC_000913__4296395__1__39____300__300__0__0	max_left=169	max_left_minus=169	max_left_plus=169	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=83	max_min_right_minus=72	max_min_right_plus=83	max_pos_hash_score=512	max_right=83	max_right_minus=72	max_right_plus=83	neg_log10_pos_hash_p_value=6.5	new_junction_coverage=0.06	new_junction_read_count=4	polymorphism_frequency=6.683e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.85	side_1_overlap=39	side_1_possible_overlap_registers=294	side_1_read_count=70	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.71	side_2_overlap=0	side_2_possible_overlap_registers=255	side_2_read_count=51	side_2_redundant=0	total_non_overlap_reads=4
JC	964	.	NC_000913	4606166	-1	NC_000913	4606403	1	0	alignment_overlap=89	coverage_minus=4	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1.384e-01	junction_possible_overlap_registers=205	key=NC_000913__4606166__-1__NC_000913__4606314__1__89____300__300__0__0	max_left=199	max_left_minus=199	max_left_plus=160	max_min_left=29	max_min_left_minus=0	max_min_left_plus=29	max_min_right=88	max_min_right_minus=68	max_min_right_plus=88	max_pos_hash_score=412	max_right=138	max_right_minus=68	max_right_plus=138	neg_log10_pos_hash_p_value=4.3	new_junction_coverage=0.14	new_junction_read_count=8	polymorphism_frequency=1.384e-01	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.90	side_1_overlap=89	side_1_possible_overlap_registers=294	side_1_read_count=74	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.83	side_2_overlap=0	side_2_possible_overlap_registers=205	side_2_read_count=48	side_2_redundant=0	total_non_overlap_reads=8
UN	965	.	NC_000913	15647	15648
UN	966	.	NC_000913	15654	15657
UN	967	.	NC_000913	15660	15660
UN	968	.	NC_000913	15663	16497
UN	969	.	NC_000913	20079	20278
UN	970	.	NC_000913	20280	20280
UN	971	.	NC_000913	224014	224512
UN	972	.	NC_000913	225164	225326
UN	973	.	NC_000913	227271	228422
UN	974	.	NC_000913	257908	258683
UN	975	.	NC_000913	270796	270796
UN	976	.	NC_000913	270798	270799
UN	977	.	NC_000913	270801	270801
UN	978	.	NC_000913	270806	271007
UN	979	.	NC_000913	271011	271011
UN	980	.	NC_000913	274235	274889
UN	981	.	NC_000913	275509	372748
UN	982	.	NC_000913	381526	381526
UN	983	.	NC_000913	381528	381529
UN	984	.	NC_000913	381533	382324
UN	985	.	NC_000913	391984	392690
UN	986	.	NC_000913	392709	392709
UN	987	.	NC_000913	526130	526130
UN	988	.	NC_000913	526133	526133
UN	989	.	NC_000913	526135	526135
UN	990	.	NC_000913	526138	526439
UN	991	.	NC_000913	567034	567034
UN	992	.	NC_000913	567039	567762
UN	993	.	NC_000913	567764	567764
UN	994	.	NC_000913	574861	575503
UN	995	.	NC_000913	608262	609073
UN	996	.	NC_000913	688119	688119
UN	997	.	NC_000913	688125	688765
UN	998	.	NC_000913	1094520	1095224
UN	999	.	NC_000913	1196363	1196363
UN	1000	.	NC_000913	1196369	1211413
UN	1001	.	NC_000913	1299499	1300697
UN	1002	.	NC_000913	1396321	1396961
UN	1003	.	NC_000913	1468165	1468166
UN	1004	.	NC_000913	1468168	1468169
UN	1005	.	NC_000913	1468173	1468987
UN	1006	.	NC_000913	1469562	1470228
UN	1007	.	NC_000913	1528557	1528557
UN	1008	.	NC_000913	1528561	1528928
UN	1009	.	NC_000913	1528937	1528937
UN	1010	.	NC_000913	1651100	1651279
UN	1011	.	NC_000913	1651281	1651282
UN	1012	.	NC_000913	1651284	1651285
UN	1013	.	NC_000913	1651288	1651290
UN	1014	.	NC_000913	1651292	1651293
UN	1015	.	NC_000913	1978495	1979270
UN	1016	.	NC_000913	2067006	2067038
UN	1017	.	NC_000913	2069196	2070006
UN	1018	.	NC_000913	2070010	2070011
UN	1019	.	NC_000913	2070018	2070018
UN	1020	.	NC_000913	2070021	2070021
UN	1021	.	NC_000913	2102022	2102663
UN	1022	.	NC_000913	2170438	2170438
UN	1023	.	NC_000913	2170448	2171164
UN	1024	.	NC_000913	2262279	2268956
UN	1025	.	NC_000913	2289197	2289833
UN	1026	.	NC_000913	2514533	2515353
UN	1027	.	NC_000913	2726309	2726310
UN	1028	.	NC_000913	2726312	2729013
UN	1029	.	NC_000913	2729826	2729826
UN	1030	.	NC_000913	2729829	2730693
UN	1031	.	NC_000913	2996616	2997427
UN	1032	.	NC_000913	2997429	2997430
UN	1033	.	NC_000913	2997432	2997433
UN	1034	.	NC_000913	2997435	2997440
UN	1035	.	NC_000913	3130419	3131070
UN	1036	.	NC_000913	3131075	3131076
UN	1037	.	NC_000913	3186385	3187161
UN	1038	.	NC_000913	3187166	3187166
UN	1039	.	NC_000913	3365826	3366470
UN	1040	.	NC_000913	3423922	3424394
UN	1041	.	NC_000913	3424928	3426576
UN	1042	.	NC_000913	3427108	3427108
UN	1043	.	NC_000913	3427116	3427116
UN	1044	.	NC_000913	3427120	3427120
UN	1045	.	NC_000913	3427126	3427126
UN	1046	.	NC_000913	3427128	3427130
UN	1047	.	NC_000913	3427132	3427133
UN	1048	.	NC_000913	3427136	3427136
UN	1049	.	NC_000913	3427139	3427139
UN	1050	.	NC_000913	3427141	3427141
UN	1051	.	NC_000913	3427145	3427145
UN	1052	.	NC_000913	3427151	3427152
UN	1053	.	NC_000913	3427154	3427154
UN	1054	.	NC_000913	3427164	3427164
UN	1055	.	NC_000913	3427169	3427169
UN	1056	.	NC_000913	3427175	3427175
UN	1057	.	NC_000913	3427184	3427184
UN	1058	.	NC_000913	3427196	3427196
UN	1059	.	NC_000913	3427202	3428304
UN	1060	.	NC_000913	3428341	3428341
UN	1061	.	NC_000913	3583691	3583920
UN	1062	.	NC_000913	3619531	3620827
UN	1063	.	NC_000913	3620830	3620833
UN	1064	.	NC_000913	3621332	3622054
UN	1065	.	NC_000913	3652285	3652970
UN	1066	.	NC_000913	3708467	3708554
UN	1067	.	NC_000913	3762522	3763824
UN	1068	.	NC_000913	3763826	3763826
UN	1069	.	NC_000913	3763831	3763831
UN	1070	.	NC_000913	3763844	3763844
UN	1071	.	NC_000913	3764297	3764297
UN	1072	.	NC_000913	3764305	3764305
UN	1073	.	NC_000913	3764317	3764318
UN	1074	.	NC_000913	3764320	3765048
UN	1075	.	NC_000913	3942320	3943136
UN	1076	.	NC_000913	3943138	3943138
UN	1077	.	NC_000913	3943141	3943142
UN	1078	.	NC_000913	3944326	3945296
UN	1079	.	NC_000913	4035425	4035425
UN	1080	.	NC_000913	4035432	4036846
UN	1081	.	NC_000913	4036848	4036849
UN	1082	.	NC_000913	4038100	4038404
UN	1083	.	NC_000913	4039011	4039109
UN	1084	.	NC_000913	4039655	4040326
UN	1085	.	NC_000913	4133801	4133801
UN	1086	.	NC_000913	4133804	4133804
UN	1087	.	NC_000913	4133806	4133806
UN	1088	.	NC_000913	4166542	4166542
UN	1089	.	NC_000913	4166550	4166557
UN	1090	.	NC_000913	4166559	4166562
UN	1091	.	NC_000913	4166564	4166604
UN	1092	.	NC_000913	4166907	4167991
UN	1093	.	NC_000913	4167993	4167993
UN	1094	.	NC_000913	4167995	4167996
UN	1095	.	NC_000913	4168815	4171385
UN	1096	.	NC_000913	4171388	4171390
UN	1097	.	NC_000913	4171396	4171396
UN	1098	.	NC_000913	4171415	4171415
UN	1099	.	NC_000913	4176829	4176864
UN	1100	.	NC_000913	4208400	4209500
UN	1101	.	NC_000913	4210272	4210272
UN	1102	.	NC_000913	4210280	4210280
UN	1103	.	NC_000913	4210285	4212849
UN	1104	.	NC_000913	4212852	4212852
UN	1105	.	NC_000913	4212854	4212856
UN	1106	.	NC_000913	4296191	4296191
UN	1107	.	NC_000913	4296268	4296268
UN	1108	.	NC_000913	4498470	4499234
UN	1109	.	NC_000913	4499239	4499239
UN	1110	.	NC_000913	4499244	4499245
UN	1111	.	NC_000913	4507741	4508429
UN	1112	.	NC_000913	4541024	4542041