#=GENOME_DIFF	1.0
#=CREATED	12:33:01 10 Oct 2025
#=PROGRAM	breseq 0.39.0 
#=COMMAND	breseq -j 8 -o /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_run15_rmdup_trimmng-adaptors-polyG/ME8307_S1_R1R2_RMDUP -r /ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8307_S1_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz /ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8307_S1_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=REFSEQ	/ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8307_S1_R1_RMDUP_RM-R2-DUP.cutadapt.fastq.gz
#=READSEQ	/ld1/breseq_work/20250912_VH01894_36_AAGTVTVM5_QC/RUN15_RMDUP/results/p05_trimmed_fastq_by_cutadapt_-m30/ME8307_S1_R2_RMDUP_RM-R1-DUP.cutadapt.fastq.gz
#=CONVERTED-BASES	412059693
#=CONVERTED-READS	1395450
#=INPUT-BASES	412143955
#=INPUT-READS	1395738
#=MAPPED-BASES	398545403
#=MAPPED-READS	1350544
SNP	1	438	NC_000913	14172	T
SNP	2	440	NC_000913	64536	T
SNP	3	441	NC_000913	64539	C
SNP	4	442	NC_000913	64593	T
SNP	5	443	NC_000913	64635	G
SNP	6	444	NC_000913	64641	A
SNP	7	445	NC_000913	64644	A
SNP	8	446	NC_000913	64665	C
SNP	9	447	NC_000913	64677	T
SNP	10	448	NC_000913	64680	C
SNP	11	449	NC_000913	64686	G
SNP	12	450	NC_000913	64692	T
SNP	13	451	NC_000913	64713	C
SNP	14	452	NC_000913	64716	T
SNP	15	453	NC_000913	64749	A
SNP	16	454	NC_000913	64755	A
SNP	17	455	NC_000913	64794	C
SNP	18	456	NC_000913	64883	A
SNP	19	457	NC_000913	64896	G
SNP	20	458	NC_000913	65028	A
SNP	21	459	NC_000913	65031	G
SNP	22	460	NC_000913	65043	C
SNP	23	461	NC_000913	65046	C
SNP	24	462	NC_000913	65057	T
SNP	25	463	NC_000913	65169	T
SNP	26	464	NC_000913	65171	G
SNP	27	465	NC_000913	65202	A
SNP	28	466	NC_000913	65208	G
SNP	29	467	NC_000913	65213	C
SNP	30	468	NC_000913	65232	T
SNP	31	469	NC_000913	65316	A
SNP	32	470	NC_000913	65381	C
SNP	33	471	NC_000913	65454	G
SNP	34	472	NC_000913	65594	C
SNP	35	473	NC_000913	65785	T
SNP	36	474	NC_000913	65788	T
SNP	37	475	NC_000913	65811	T
SNP	38	476	NC_000913	65905	T
DEL	39	477	NC_000913	66024	1
SNP	40	478	NC_000913	66032	T
SNP	41	479	NC_000913	66041	A
SNP	42	480	NC_000913	66053	G
SNP	43	481	NC_000913	66092	G
SNP	44	482	NC_000913	66134	A
SNP	45	483	NC_000913	66227	G
SNP	46	484	NC_000913	66245	A
SNP	47	485	NC_000913	66263	T
SNP	48	486	NC_000913	66266	G
SNP	49	487	NC_000913	66287	C
SNP	50	488	NC_000913	66308	T
SNP	51	489	NC_000913	66323	A
SNP	52	490	NC_000913	66343	C
SNP	53	491	NC_000913	66403	T
SNP	54	492	NC_000913	66494	A
SNP	55	493	NC_000913	66518	C
SNP	56	494	NC_000913	66686	G
SNP	57	495	NC_000913	66688	A
SNP	58	496	NC_000913	66784	T
SNP	59	497	NC_000913	66819	C
SNP	60	498	NC_000913	66823	T
SNP	61	499	NC_000913	66830	A
SNP	62	500	NC_000913	66847	T
SNP	63	501	NC_000913	66898	G
SNP	64	502	NC_000913	66901	A
SNP	65	503	NC_000913	66946	C
SNP	66	504	NC_000913	66970	C
SNP	67	505	NC_000913	67111	A
SNP	68	506	NC_000913	67123	C
SNP	69	507	NC_000913	67152	G
SNP	70	508	NC_000913	67171	A
SNP	71	509	NC_000913	67195	T
SNP	72	510	NC_000913	67259	A
SNP	73	511	NC_000913	67264	A
SNP	74	512	NC_000913	67405	G
SNP	75	513	NC_000913	67471	T
SNP	76	514	NC_000913	67596	C
SNP	77	515	NC_000913	67612	T
SNP	78	516	NC_000913	67759	A
SNP	79	517	NC_000913	67798	A
SNP	80	518	NC_000913	67834	A
SNP	81	519	NC_000913	67900	G
SNP	82	520	NC_000913	68236	A
SNP	83	521	NC_000913	68468	T
SNP	84	522	NC_000913	68476	G
SNP	85	523	NC_000913	68519	G
SNP	86	524	NC_000913	68678	C
SNP	87	525	NC_000913	68693	G
SNP	88	526	NC_000913	68837	T
SNP	89	527	NC_000913	68840	C
SNP	90	528	NC_000913	68842	A
SNP	91	529	NC_000913	68846	A
SNP	92	530	NC_000913	68849	A
SNP	93	531	NC_000913	68956	C
SNP	94	532	NC_000913	69001	T
SNP	95	533	NC_000913	69014	G
SNP	96	534	NC_000913	69323	G
SNP	97	535	NC_000913	69400	A
SNP	98	536	NC_000913	69605	G
SNP	99	537	NC_000913	69611	A
SNP	100	538	NC_000913	69629	A
DEL	101	539	NC_000913	69665	1
INS	102	540	NC_000913	69672	T
SNP	103	541	NC_000913	69752	A
SNP	104	542	NC_000913	69935	T
SNP	105	543	NC_000913	69981	C
SNP	106	544	NC_000913	69983	G
SNP	107	545	NC_000913	70289	T
SNP	108	546	NC_000913	70371	C
SNP	109	547	NC_000913	70434	T
SNP	110	548	NC_000913	70581	T
SNP	111	549	NC_000913	70740	G
SNP	112	550	NC_000913	71079	T
SNP	113	551	NC_000913	71082	C
SNP	114	552	NC_000913	71085	C
SNP	115	553	NC_000913	71109	C
SNP	116	554	NC_000913	71175	G
SNP	117	555	NC_000913	71214	C
SNP	118	556	NC_000913	71386	T
SNP	119	557	NC_000913	71543	G
SNP	120	558	NC_000913	71545	C
SNP	121	559	NC_000913	71548	T
SUB	122	560,561	NC_000913	71551	2	TC
SNP	123	562	NC_000913	71555	C
SNP	124	563	NC_000913	71569	C
SNP	125	564	NC_000913	71572	C
SNP	126	565	NC_000913	71584	C
SNP	127	566	NC_000913	71639	T
SNP	128	567	NC_000913	71644	C
SNP	129	568	NC_000913	71701	C
SNP	130	569	NC_000913	71764	A
SNP	131	570	NC_000913	71770	C
SNP	132	571	NC_000913	71806	A
SNP	133	572	NC_000913	71824	T
SNP	134	573	NC_000913	71857	A
SNP	135	574	NC_000913	71875	C
SNP	136	575	NC_000913	71899	G
SNP	137	576	NC_000913	71902	G
SNP	138	577	NC_000913	71908	A
SNP	139	578	NC_000913	71912	G
SNP	140	579	NC_000913	71962	A
SNP	141	580	NC_000913	71965	C
SNP	142	581	NC_000913	71968	T
SNP	143	582	NC_000913	71974	A
SNP	144	583	NC_000913	71989	G
SNP	145	584	NC_000913	71995	C
SNP	146	585	NC_000913	72117	G
SNP	147	586	NC_000913	72121	T
SUB	148	587,588	NC_000913	72151	2	GA
SUB	149	589,590	NC_000913	72183	2	GT
SNP	150	591	NC_000913	72202	T
SNP	151	592	NC_000913	72217	T
SNP	152	593	NC_000913	72253	T
SNP	153	594	NC_000913	72290	T
SNP	154	595	NC_000913	72322	C
SNP	155	596	NC_000913	72325	C
SNP	156	597	NC_000913	72349	G
SNP	157	598	NC_000913	72361	A
SNP	158	599	NC_000913	72367	T
SNP	159	600	NC_000913	72381	A
SNP	160	601	NC_000913	72423	G
SNP	161	602	NC_000913	72493	C
SNP	162	603	NC_000913	72517	G
SNP	163	604	NC_000913	72547	A
SNP	164	605	NC_000913	72605	T
SNP	165	606	NC_000913	72614	G
SNP	166	607	NC_000913	72661	C
SNP	167	608	NC_000913	72676	A
SNP	168	609	NC_000913	72691	T
SNP	169	610	NC_000913	72731	G
SNP	170	611	NC_000913	72733	C
SNP	171	612	NC_000913	72736	G
SNP	172	613	NC_000913	72745	A
SNP	173	614	NC_000913	72751	G
SNP	174	615	NC_000913	72799	G
SNP	175	616	NC_000913	72820	T
SNP	176	617	NC_000913	72862	T
SNP	177	618	NC_000913	72892	T
SNP	178	619	NC_000913	72928	C
SNP	179	620	NC_000913	72974	T
SNP	180	621	NC_000913	73001	G
SNP	181	622	NC_000913	73115	G
SNP	182	623	NC_000913	73121	A
SNP	183	624	NC_000913	73163	G
SNP	184	625	NC_000913	73178	C
SNP	185	626	NC_000913	73193	G
SNP	186	627	NC_000913	73208	C
SNP	187	628	NC_000913	73214	A
SNP	188	629	NC_000913	73253	T
SNP	189	630	NC_000913	73319	C
SNP	190	631	NC_000913	73328	A
SNP	191	632	NC_000913	73331	G
SNP	192	633	NC_000913	73413	G
SNP	193	634	NC_000913	73445	A
SNP	194	635	NC_000913	73582	G
SNP	195	636	NC_000913	73604	C
SNP	196	637	NC_000913	73712	T
SNP	197	638	NC_000913	73744	G
SNP	198	639	NC_000913	73753	A
SNP	199	640	NC_000913	73763	A
SNP	200	641	NC_000913	73777	T
SNP	201	642	NC_000913	73790	C
SNP	202	643	NC_000913	73853	T
SNP	203	644	NC_000913	73868	G
SNP	204	645	NC_000913	73919	T
SUB	205	646,647	NC_000913	73984	2	CG
SNP	206	648	NC_000913	74009	C
SNP	207	649	NC_000913	74015	T
SNP	208	650	NC_000913	74027	A
SNP	209	651	NC_000913	74069	T
SNP	210	652	NC_000913	74081	T
SNP	211	653	NC_000913	74084	G
SNP	212	654	NC_000913	74087	C
SNP	213	655	NC_000913	74204	A
SNP	214	656	NC_000913	74209	G
SNP	215	657	NC_000913	74222	T
SNP	216	658	NC_000913	74234	G
SNP	217	659	NC_000913	74308	C
SNP	218	660	NC_000913	74321	C
SNP	219	661	NC_000913	75707	T
SUB	220	662,663	NC_000913	75752	2	G
SUB	221	664,665	NC_000913	75758	1	GC
SNP	222	666	NC_000913	75767	T
SNP	223	667	NC_000913	75806	G
SNP	224	668	NC_000913	75812	T
SNP	225	669	NC_000913	75830	G
SNP	226	670	NC_000913	75833	G
SNP	227	671	NC_000913	75851	G
SNP	228	672	NC_000913	75854	C
SNP	229	673	NC_000913	75860	A
SNP	230	674	NC_000913	75863	G
SNP	231	675	NC_000913	75869	G
SNP	232	676	NC_000913	75875	C
SNP	233	677	NC_000913	75881	C
SNP	234	678	NC_000913	75887	C
SNP	235	679	NC_000913	75890	G
SNP	236	680	NC_000913	75893	C
SNP	237	681	NC_000913	75899	C
SUB	238	682,683	NC_000913	75901	2	GC
SNP	239	684	NC_000913	75905	A
SNP	240	685	NC_000913	75908	A
SNP	241	686	NC_000913	75920	C
SNP	242	687	NC_000913	75938	A
SNP	243	688	NC_000913	75950	G
SNP	244	689	NC_000913	75953	C
SUB	245	690,691	NC_000913	75966	2	TC
SUB	246	692,693	NC_000913	75984	2	CT
SNP	247	694	NC_000913	76000	C
SNP	248	695	NC_000913	76082	C
SNP	249	696	NC_000913	76086	A
SNP	250	697	NC_000913	76283	T
SNP	251	698	NC_000913	76334	A
SNP	252	699	NC_000913	76358	A
SNP	253	700	NC_000913	76364	A
SNP	254	701	NC_000913	76478	G
SNP	255	702	NC_000913	76576	A
SNP	256	703	NC_000913	76700	G
SNP	257	704	NC_000913	76727	A
SNP	258	705	NC_000913	76775	T
SNP	259	706	NC_000913	76862	A
SNP	260	707	NC_000913	77021	T
SNP	261	708	NC_000913	77027	G
SNP	262	709	NC_000913	77117	A
SNP	263	710	NC_000913	77776	A
SNP	264	711	NC_000913	78406	T
SNP	265	712	NC_000913	78520	A
SNP	266	713	NC_000913	78524	C
SNP	267	714	NC_000913	78533	C
SNP	268	715	NC_000913	78761	A
SNP	269	716	NC_000913	79040	G
SNP	270	717	NC_000913	80529	G
SNP	271	718	NC_000913	82633	G
SNP	272	719	NC_000913	82894	G
SNP	273	720	NC_000913	82909	T
SNP	274	721	NC_000913	82933	A
SNP	275	722	NC_000913	82957	T
SNP	276	723	NC_000913	83179	T
SNP	277	724	NC_000913	83182	A
SNP	278	725	NC_000913	83296	C
SNP	279	726	NC_000913	83317	G
SNP	280	727	NC_000913	83344	A
SNP	281	728	NC_000913	83359	T
SNP	282	729	NC_000913	83371	A
SNP	283	730	NC_000913	83383	A
SNP	284	731	NC_000913	84251	T
SNP	285	732	NC_000913	84267	C
SUB	286	733,734	NC_000913	84305	2	CG
SNP	287	735	NC_000913	84415	G
SNP	288	736	NC_000913	85481	C
SNP	289	737	NC_000913	86241	G
SNP	290	738	NC_000913	86271	T
SNP	291	739	NC_000913	86315	T
SNP	292	740	NC_000913	86345	C
SNP	293	741	NC_000913	86658	G
SNP	294	742	NC_000913	87410	T
SNP	295	743	NC_000913	89089	A
SNP	296	744	NC_000913	89103	C
SNP	297	745	NC_000913	89143	G
SNP	298	746	NC_000913	89145	T
SNP	299	747	NC_000913	89239	A
SNP	300	748	NC_000913	89241	A
SNP	301	749	NC_000913	89263	G
SNP	302	750	NC_000913	89316	C
SNP	303	751	NC_000913	89321	G
SNP	304	752	NC_000913	89471	G
SNP	305	753	NC_000913	89570	C
SNP	306	754	NC_000913	89699	C
SNP	307	755	NC_000913	89754	C
SNP	308	756	NC_000913	90432	G
SNP	309	757	NC_000913	90435	C
SNP	310	758	NC_000913	91904	A
SNP	311	759	NC_000913	91916	T
SNP	312	760	NC_000913	91922	A
SNP	313	761	NC_000913	91949	T
SNP	314	762	NC_000913	92096	T
SNP	315	763	NC_000913	92162	T
SNP	316	764	NC_000913	92327	T
SNP	317	765	NC_000913	92354	G
SNP	318	766	NC_000913	92687	G
SNP	319	767	NC_000913	92810	C
SNP	320	768	NC_000913	92843	G
SNP	321	769	NC_000913	94278	A
SNP	322	770	NC_000913	134256	T
SNP	323	771	NC_000913	246747	T
DEL	324	913,924	NC_000913	257908	776
SUB	325	772,773	NC_000913	480295	2	AA
SNP	326	775	NC_000913	690948	A
SNP	327	776	NC_000913	700038	A
SUB	328	777,778	NC_000913	809217	2	AG
SNP	329	780	NC_000913	968837	A
DEL	330	916,937	NC_000913	1016978	13331
SNP	331	782	NC_000913	1040126	T
SNP	332	783	NC_000913	1041585	T
SNP	333	784	NC_000913	1061935	A
SNP	334	785	NC_000913	1062188	T
SNP	335	786	NC_000913	1086443	T
SUB	336	787,788	NC_000913	1111727	2	TT
SNP	337	789	NC_000913	1169836	G
SNP	338	790	NC_000913	1189980	G
SNP	339	791	NC_000913	1196220	T
SNP	340	792	NC_000913	1196232	T
SNP	341	793	NC_000913	1196245	C
SNP	342	794	NC_000913	1196247	G
SNP	343	795	NC_000913	1196277	T
SNP	344	796	NC_000913	1196280	C
SNP	345	797	NC_000913	1196283	G
SNP	346	798	NC_000913	1196292	T
SNP	347	799	NC_000913	1196304	A
SNP	348	800	NC_000913	1196316	A
SNP	349	803	NC_000913	1242609	T
SNP	350	805	NC_000913	1301992	T
MOB	351	927,945	NC_000913	1303314	IS186	1	6	del_end=1
SNP	352	806	NC_000913	1306736	G
SNP	353	807	NC_000913	1310770	G
SNP	354	808	NC_000913	1337394	G
SNP	355	809	NC_000913	1357202	T
SNP	356	810	NC_000913	1358859	C
MOB	357	947,948	NC_000913	1399590	IS5	1	4
SNP	358	811	NC_000913	1449738	T
SNP	359	814	NC_000913	1475514	G
SNP	360	818	NC_000913	1643679	T
SNP	361	819	NC_000913	1652331	C
SNP	362	821	NC_000913	1721136	T
SNP	363	822	NC_000913	1776715	T
SNP	364	823	NC_000913	1894839	C
MOB	365	949,950	NC_000913	1907577	IS1	-1	8
INS	366	827	NC_000913	1978083	A
SNP	367	828	NC_000913	1987499	A
SNP	368	829	NC_000913	2027332	A
SNP	369	830	NC_000913	2040433	A
SNP	370	831	NC_000913	2041278	A
SNP	371	832	NC_000913	2052885	A
SNP	372	833	NC_000913	2099525	T
DEL	373	834	NC_000913	2111259	1
SNP	374	835	NC_000913	2125037	A
DEL	375	836,837	NC_000913	2173363	2
SNP	376	838	NC_000913	2188087	C
DEL	377	919,953	NC_000913	2262279	6678
SNP	378	841	NC_000913	2339173	A
SNP	379	842	NC_000913	2384808	T
SNP	380	843	NC_000913	2410419	A
SNP	381	845	NC_000913	2481400	A
SNP	382	846	NC_000913	2484827	T
SNP	383	848	NC_000913	2579943	A
MOB	384	957,958	NC_000913	2913392	IS2	-1	5
SNP	385	851	NC_000913	2926292	T
SUB	386	856,857	NC_000913	3088010	2	TT
SNP	387	859	NC_000913	3223646	T
SUB	388	860,861	NC_000913	3336411	2	AT
SNP	389	862	NC_000913	3388041	G
MOB	390	926,938	NC_000913	3429986	IS3	-1	5	ins_end=T
SNP	391	863	NC_000913	3474425	C
SNP	392	864	NC_000913	3486175	A
SNP	393	865	NC_000913	3486502	T
MOB	394	959,960	NC_000913	3546574	IS2	1	5
INS	395	866	NC_000913	3560455	G
SNP	396	867	NC_000913	3629921	T
SNP	397	868	NC_000913	3682515	T
SNP	398	869	NC_000913	3707947	A
DEL	399	921,964	NC_000913	3708467	168
SNP	400	870	NC_000913	3725176	G
SNP	401	871	NC_000913	3761230	A
SNP	402	872	NC_000913	3771979	T
INS	403	874	NC_000913	3815883	C
INS	404	965	NC_000913	3822651	CAGGAT	repeat_length=6	repeat_new_copies=2	repeat_ref_copies=1	repeat_seq=CAGGAT
SNP	405	875	NC_000913	3823162	T
SNP	406	876	NC_000913	3869637	A
SNP	407	877	NC_000913	3878536	A
SNP	408	878	NC_000913	3906764	A
SNP	409	880	NC_000913	3925200	C
SNP	410	881	NC_000913	3926991	A
SUB	411	882,883	NC_000913	3966530	2	TT
SNP	412	884	NC_000913	4003502	T
SNP	413	885	NC_000913	4015220	C
SNP	414	886	NC_000913	4015225	T
SNP	415	887	NC_000913	4084903	G
SNP	416	888	NC_000913	4092703	G
SNP	417	889	NC_000913	4113851	A
SNP	418	890	NC_000913	4143377	T
SNP	419	891	NC_000913	4161248	T
SNP	420	892	NC_000913	4164123	G
SNP	421	893	NC_000913	4215347	A
SNP	422	894	NC_000913	4223638	C
INS	423	895	NC_000913	4282332	A	repeat_length=1	repeat_new_copies=6	repeat_ref_copies=5	repeat_seq=A
SUB	424	896,897	NC_000913	4293781	2	AT
INS	425	898,899	NC_000913	4296381	GC
SNP	426	900	NC_000913	4325644	T
SNP	427	901	NC_000913	4392997	A
SNP	428	902	NC_000913	4393552	A
SNP	429	903	NC_000913	4396373	T
SNP	430	904	NC_000913	4396772	C
SNP	431	905	NC_000913	4473900	T
SNP	432	906	NC_000913	4475493	C
SNP	433	907	NC_000913	4508810	T
SNP	434	908	NC_000913	4510238	G
SNP	435	910	NC_000913	4556486	T
SNP	436	911	NC_000913	4561368	T
DEL	437	912	NC_000913	4563778	1	repeat_length=1	repeat_new_copies=5	repeat_ref_copies=6	repeat_seq=G
RA	438	.	NC_000913	14172	0	C	T	consensus_score=374.4	frequency=1	major_base=T	major_cov=39/70	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/70	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/70
RA	439	.	NC_000913	58065	0	C	A	bias_e_value=0.10192	bias_p_value=2.19578e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=155.7	fisher_strand_p_value=1.01132e-09	frequency=2.989e-01	ks_quality_p_value=1	major_base=C	major_cov=20/41	major_frequency=7.011e-01	minor_base=A	minor_cov=26/0	new_cov=26/0	polymorphism_frequency=2.989e-01	polymorphism_score=14.9	prediction=polymorphism	ref_cov=20/41	total_cov=46/41
RA	440	.	NC_000913	64536	0	C	T	consensus_score=213.0	frequency=1	major_base=T	major_cov=41/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/19
RA	441	.	NC_000913	64539	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=213.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=40/19	major_frequency=9.833e-01	minor_base=A	minor_cov=1/0	new_cov=40/19	polymorphism_frequency=9.833e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/19
RA	442	.	NC_000913	64593	0	C	T	consensus_score=279.3	frequency=1	major_base=T	major_cov=57/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=57/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=57/18
RA	443	.	NC_000913	64635	0	A	G	consensus_score=281.6	frequency=1	major_base=G	major_cov=61/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/16
RA	444	.	NC_000913	64641	0	T	A	consensus_score=243.8	frequency=1	major_base=A	major_cov=60/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=60/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=60/15
RA	445	.	NC_000913	64644	0	C	A	bias_e_value=4641650	bias_p_value=1	consensus_score=237.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=59/15	major_frequency=9.867e-01	minor_base=G	minor_cov=1/0	new_cov=59/15	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=60/15
RA	446	.	NC_000913	64665	0	T	C	consensus_score=292.4	frequency=1	major_base=C	major_cov=62/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=62/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=62/18
RA	447	.	NC_000913	64677	0	A	T	consensus_score=294.7	frequency=1	major_base=T	major_cov=61/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/19
RA	448	.	NC_000913	64680	0	G	C	bias_e_value=4641650	bias_p_value=1	consensus_score=252.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=58/19	major_frequency=9.625e-01	minor_base=A	minor_cov=3/0	new_cov=58/19	polymorphism_frequency=9.625e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/19
RA	449	.	NC_000913	64686	0	T	G	consensus_score=288.0	frequency=1	major_base=G	major_cov=62/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=62/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=62/19
RA	450	.	NC_000913	64692	0	C	T	consensus_score=310.6	frequency=1	major_base=T	major_cov=63/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=63/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=63/21
RA	451	.	NC_000913	64713	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=315.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=64/20	major_frequency=9.767e-01	minor_base=A	minor_cov=2/0	new_cov=64/20	polymorphism_frequency=9.767e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=66/21
RA	452	.	NC_000913	64716	0	C	T	bias_e_value=3667110	bias_p_value=0.790045	consensus_score=301.1	fisher_strand_p_value=0.426624	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=65/20	major_frequency=9.770e-01	minor_base=C	minor_cov=1/1	new_cov=65/20	polymorphism_frequency=9.770e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=1/1	total_cov=66/21
RA	453	.	NC_000913	64749	0	G	A	consensus_score=255.3	frequency=1	major_base=A	major_cov=57/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=57/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=57/26
RA	454	.	NC_000913	64755	0	G	A	consensus_score=264.3	frequency=1	major_base=A	major_cov=55/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=55/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/27
RA	455	.	NC_000913	64794	0	T	C	bias_e_value=3576900	bias_p_value=0.770609	consensus_score=320.6	fisher_strand_p_value=0.404494	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=53/35	major_frequency=9.888e-01	minor_base=T	minor_cov=0/1	new_cov=53/35	polymorphism_frequency=9.888e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=53/36
RA	456	.	NC_000913	64883	0	G	A	consensus_score=264.6	frequency=1	major_base=A	major_cov=35/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/45
RA	457	.	NC_000913	64896	0	A	G	bias_e_value=3785330	bias_p_value=0.815514	consensus_score=296.9	fisher_strand_p_value=0.457831	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=37/45	major_frequency=9.880e-01	minor_base=A	minor_cov=1/0	new_cov=37/45	polymorphism_frequency=9.880e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=38/45
RA	458	.	NC_000913	65028	0	G	A	bias_e_value=3162220	bias_p_value=0.681271	consensus_score=291.2	fisher_strand_p_value=0.317073	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=25/56	major_frequency=9.878e-01	minor_base=C	minor_cov=1/0	new_cov=25/56	polymorphism_frequency=9.878e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/56
RA	459	.	NC_000913	65031	0	A	G	consensus_score=286.9	frequency=1	major_base=G	major_cov=26/55	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/55	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/55
RA	460	.	NC_000913	65043	0	A	C	bias_e_value=3247010	bias_p_value=0.699537	consensus_score=283.5	fisher_strand_p_value=0.333333	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=26/54	major_frequency=9.877e-01	minor_base=A	minor_cov=1/0	new_cov=26/54	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=27/54
RA	461	.	NC_000913	65046	0	A	C	bias_e_value=3247010	bias_p_value=0.699537	consensus_score=293.9	fisher_strand_p_value=0.333333	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=26/54	major_frequency=9.877e-01	minor_base=A	minor_cov=1/0	new_cov=26/54	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=27/54
RA	462	.	NC_000913	65057	0	G	T	consensus_score=274.7	frequency=1	major_base=T	major_cov=27/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/56
RA	463	.	NC_000913	65169	0	C	T	consensus_score=229.2	frequency=1	major_base=T	major_cov=25/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/44
RA	464	.	NC_000913	65171	0	A	G	consensus_score=248.0	frequency=1	major_base=G	major_cov=25/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/44
RA	465	.	NC_000913	65202	0	G	A	consensus_score=221.7	frequency=1	major_base=A	major_cov=23/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/39
RA	466	.	NC_000913	65208	0	A	G	consensus_score=219.7	frequency=1	major_base=G	major_cov=23/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/38
RA	467	.	NC_000913	65213	0	A	C	consensus_score=218.5	frequency=1	major_base=C	major_cov=22/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/38
RA	468	.	NC_000913	65232	0	C	T	consensus_score=200.9	frequency=1	major_base=T	major_cov=23/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/36
RA	469	.	NC_000913	65316	0	T	A	consensus_score=203.1	frequency=1	major_base=A	major_cov=34/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/26
RA	470	.	NC_000913	65381	0	T	C	consensus_score=193.1	frequency=1	major_base=C	major_cov=30/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/24
RA	471	.	NC_000913	65454	0	A	G	consensus_score=184.4	frequency=1	major_base=G	major_cov=34/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/19
RA	472	.	NC_000913	65594	0	A	C	bias_e_value=3803810	bias_p_value=0.819495	consensus_score=182.5	fisher_strand_p_value=0.462963	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=24/29	major_frequency=9.815e-01	minor_base=T	minor_cov=1/0	new_cov=24/29	polymorphism_frequency=9.815e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/0	total_cov=25/29
RA	473	.	NC_000913	65785	0	A	T	consensus_score=182.5	frequency=1	major_base=T	major_cov=23/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/32
RA	474	.	NC_000913	65788	0	A	T	consensus_score=191.9	frequency=1	major_base=T	major_cov=23/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/32
RA	475	.	NC_000913	65811	0	G	T	bias_e_value=3684450	bias_p_value=0.793779	consensus_score=195.8	fisher_strand_p_value=0.431034	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=24/33	major_frequency=9.828e-01	minor_base=C	minor_cov=1/0	new_cov=24/33	polymorphism_frequency=9.828e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/33
RA	476	.	NC_000913	65905	0	C	T	consensus_score=203.2	frequency=1	major_base=T	major_cov=29/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	477	.	NC_000913	66024	0	C	.	consensus_score=295.7	frequency=1	major_base=.	major_cov=35/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/27
RA	478	.	NC_000913	66032	0	C	T	consensus_score=219.1	frequency=1	major_base=T	major_cov=36/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/26
RA	479	.	NC_000913	66041	0	G	A	consensus_score=200.1	frequency=1	major_base=A	major_cov=36/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/26
RA	480	.	NC_000913	66053	0	A	G	consensus_score=236.3	frequency=1	major_base=G	major_cov=42/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/23
RA	481	.	NC_000913	66092	0	A	G	bias_e_value=3389130	bias_p_value=0.730156	consensus_score=246.6	fisher_strand_p_value=0.362319	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=44/24	major_frequency=9.855e-01	minor_base=T	minor_cov=0/1	new_cov=44/24	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/25
RA	482	.	NC_000913	66134	0	G	A	bias_e_value=3270800	bias_p_value=0.704662	consensus_score=225.2	fisher_strand_p_value=0.338028	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=47/23	major_frequency=9.859e-01	minor_base=G	minor_cov=0/1	new_cov=47/23	polymorphism_frequency=9.859e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=47/24
RA	483	.	NC_000913	66227	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=253.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=41/32	major_frequency=9.865e-01	minor_base=A	minor_cov=1/0	new_cov=41/32	polymorphism_frequency=9.865e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=42/32
RA	484	.	NC_000913	66245	0	G	A	consensus_score=243.3	frequency=1	major_base=A	major_cov=40/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/32
RA	485	.	NC_000913	66263	0	C	T	consensus_score=260.1	frequency=1	major_base=T	major_cov=43/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/31
RA	486	.	NC_000913	66266	0	A	G	consensus_score=259.1	frequency=1	major_base=G	major_cov=43/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/31
RA	487	.	NC_000913	66287	0	G	C	bias_e_value=4638260	bias_p_value=0.99927	consensus_score=197.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.96203	major_base=C	major_cov=37/23	major_frequency=9.677e-01	minor_base=A	minor_cov=1/1	new_cov=37/23	polymorphism_frequency=9.677e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/0	total_cov=38/25
RA	488	.	NC_000913	66308	0	C	T	consensus_score=211.8	frequency=1	major_base=T	major_cov=35/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/26
RA	489	.	NC_000913	66323	0	G	A	bias_e_value=3903670	bias_p_value=0.841009	consensus_score=192.4	fisher_strand_p_value=0.492063	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=30/32	major_frequency=9.688e-01	minor_base=C	minor_cov=2/0	new_cov=30/32	polymorphism_frequency=9.688e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/32
RA	490	.	NC_000913	66343	0	T	C	consensus_score=218.5	frequency=1	major_base=C	major_cov=30/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/36
RA	491	.	NC_000913	66403	0	C	T	bias_e_value=3664940	bias_p_value=0.789576	consensus_score=186.1	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=0.994173	major_base=T	major_cov=23/32	major_frequency=9.821e-01	minor_base=C	minor_cov=1/0	new_cov=23/32	polymorphism_frequency=9.821e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=1/0	total_cov=24/32
RA	492	.	NC_000913	66494	0	G	A	consensus_score=193.1	frequency=1	major_base=A	major_cov=21/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/38
RA	493	.	NC_000913	66518	0	T	C	consensus_score=186.2	frequency=1	major_base=C	major_cov=21/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/35
RA	494	.	NC_000913	66686	0	C	G	bias_e_value=3719040	bias_p_value=0.801231	consensus_score=148.6	fisher_strand_p_value=0.44	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=21/28	major_frequency=9.800e-01	minor_base=T	minor_cov=1/0	new_cov=21/28	polymorphism_frequency=9.800e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/28
RA	495	.	NC_000913	66688	0	G	A	bias_e_value=3717670	bias_p_value=0.800937	consensus_score=144.3	fisher_strand_p_value=0.44	frequency=1	ks_quality_p_value=0.999184	major_base=A	major_cov=21/28	major_frequency=9.800e-01	minor_base=C	minor_cov=1/0	new_cov=21/28	polymorphism_frequency=9.800e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=0/0	total_cov=22/28
RA	496	.	NC_000913	66784	0	A	T	bias_e_value=3364570	bias_p_value=0.724864	consensus_score=174.0	fisher_strand_p_value=0.357143	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=36/19	major_frequency=9.821e-01	minor_base=C	minor_cov=0/1	new_cov=36/19	polymorphism_frequency=9.821e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/20
RA	497	.	NC_000913	66819	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=177.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=38/19	major_frequency=9.661e-01	minor_base=T	minor_cov=2/0	new_cov=38/19	polymorphism_frequency=9.661e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=40/19
RA	498	.	NC_000913	66823	0	G	T	consensus_score=185.8	frequency=1	major_base=T	major_cov=40/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/19
RA	499	.	NC_000913	66830	0	G	A	consensus_score=167.7	frequency=1	major_base=A	major_cov=40/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/20
RA	500	.	NC_000913	66847	0	C	T	consensus_score=206.7	frequency=1	major_base=T	major_cov=41/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/24
RA	501	.	NC_000913	66898	0	T	G	consensus_score=216.3	frequency=1	major_base=G	major_cov=41/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/23
RA	502	.	NC_000913	66901	0	G	A	consensus_score=189.6	frequency=1	major_base=A	major_cov=41/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/23
RA	503	.	NC_000913	66946	0	T	C	consensus_score=223.9	frequency=1	major_base=C	major_cov=39/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/26
RA	504	.	NC_000913	66970	0	T	C	consensus_score=230.6	frequency=1	major_base=C	major_cov=39/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/27
RA	505	.	NC_000913	67111	0	G	A	consensus_score=231.0	frequency=1	major_base=A	major_cov=30/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/39
RA	506	.	NC_000913	67123	0	T	C	consensus_score=249.3	frequency=1	major_base=C	major_cov=30/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/39
RA	507	.	NC_000913	67152	0	A	G	consensus_score=224.0	frequency=1	major_base=G	major_cov=30/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/37
RA	508	.	NC_000913	67171	0	G	A	bias_e_value=2113930	bias_p_value=0.455426	consensus_score=208.3	fisher_strand_p_value=0.16121	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=24/38	major_frequency=9.688e-01	minor_base=C	minor_cov=2/0	new_cov=24/38	polymorphism_frequency=9.688e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/38
RA	509	.	NC_000913	67195	0	G	T	consensus_score=228.5	frequency=1	major_base=T	major_cov=25/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/42
RA	510	.	NC_000913	67259	0	G	A	bias_e_value=202366	bias_p_value=0.0435979	consensus_score=195.1	fisher_strand_p_value=0.00737788	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=25/36	major_frequency=9.104e-01	minor_base=C	minor_cov=6/0	new_cov=25/36	polymorphism_frequency=9.104e-01	polymorphism_score=-5.3	prediction=consensus	ref_cov=0/0	total_cov=31/36
RA	511	.	NC_000913	67264	0	G	A	bias_e_value=2498240	bias_p_value=0.538223	consensus_score=213.0	fisher_strand_p_value=0.210312	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=29/36	major_frequency=9.701e-01	minor_base=C	minor_cov=2/0	new_cov=29/36	polymorphism_frequency=9.701e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/36
RA	512	.	NC_000913	67405	0	A	G	consensus_score=254.6	frequency=1	major_base=G	major_cov=41/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/29
RA	513	.	NC_000913	67471	0	A	T	consensus_score=251.6	frequency=1	major_base=T	major_cov=45/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/29
RA	514	.	NC_000913	67596	0	T	C	consensus_score=246.6	frequency=1	major_base=C	major_cov=35/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/34
RA	515	.	NC_000913	67612	0	G	T	consensus_score=222.6	frequency=1	major_base=T	major_cov=32/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/34
RA	516	.	NC_000913	67759	0	G	A	consensus_score=182.1	frequency=1	major_base=A	major_cov=11/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/40
RA	517	.	NC_000913	67798	0	T	A	consensus_score=172.8	frequency=1	major_base=A	major_cov=8/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/40
RA	518	.	NC_000913	67834	0	G	A	consensus_score=179.6	frequency=1	major_base=A	major_cov=6/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/44
RA	519	.	NC_000913	67900	0	C	G	consensus_score=151.4	frequency=1	major_base=G	major_cov=5/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/38
RA	520	.	NC_000913	68236	0	G	A	consensus_score=66.2	frequency=1	major_base=A	major_cov=12/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/11
RA	521	.	NC_000913	68468	0	C	T	consensus_score=202.0	frequency=1	major_base=T	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	522	.	NC_000913	68476	0	A	G	consensus_score=195.3	frequency=1	major_base=G	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	523	.	NC_000913	68519	0	A	G	consensus_score=156.7	frequency=1	major_base=G	major_cov=27/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/19
RA	524	.	NC_000913	68678	0	T	C	consensus_score=139.8	frequency=1	major_base=C	major_cov=23/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/18
RA	525	.	NC_000913	68693	0	A	G	consensus_score=142.7	frequency=1	major_base=G	major_cov=22/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/18
RA	526	.	NC_000913	68837	0	C	T	consensus_score=154.3	frequency=1	major_base=T	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	527	.	NC_000913	68840	0	T	C	consensus_score=161.3	frequency=1	major_base=C	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	528	.	NC_000913	68842	0	T	A	consensus_score=144.0	frequency=1	major_base=A	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	529	.	NC_000913	68846	0	G	A	consensus_score=139.5	frequency=1	major_base=A	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	530	.	NC_000913	68849	0	G	A	consensus_score=142.4	frequency=1	major_base=A	major_cov=29/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/15
RA	531	.	NC_000913	68956	0	T	C	consensus_score=185.5	frequency=1	major_base=C	major_cov=31/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/20
RA	532	.	NC_000913	69001	0	C	T	consensus_score=193.1	frequency=1	major_base=T	major_cov=29/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/25
RA	533	.	NC_000913	69014	0	A	G	consensus_score=199.6	frequency=1	major_base=G	major_cov=27/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/28
RA	534	.	NC_000913	69323	0	A	G	consensus_score=245.6	frequency=1	major_base=G	major_cov=36/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/31
RA	535	.	NC_000913	69400	0	G	A	consensus_score=212.6	frequency=1	major_base=A	major_cov=34/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/31
RA	536	.	NC_000913	69605	0	A	G	consensus_score=188.2	frequency=1	major_base=G	major_cov=24/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/29
RA	537	.	NC_000913	69611	0	G	A	consensus_score=174.9	frequency=1	major_base=A	major_cov=24/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/28
RA	538	.	NC_000913	69629	0	G	A	consensus_score=165.5	frequency=1	major_base=A	major_cov=24/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/27
RA	539	.	NC_000913	69665	0	C	.	consensus_score=242.8	frequency=1	major_base=.	major_cov=25/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/26
RA	540	.	NC_000913	69672	1	.	T	bias_e_value=4641630	bias_p_value=0.999996	consensus_score=181.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997101	major_base=T	major_cov=25/27	major_frequency=9.811e-01	minor_base=.	minor_cov=0/1	new_cov=25/27	polymorphism_frequency=9.811e-01	polymorphism_score=-2.4	prediction=consensus	ref_cov=0/1	total_cov=25/28
RA	541	.	NC_000913	69752	0	T	A	consensus_score=188.8	frequency=1	major_base=A	major_cov=25/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/32
RA	542	.	NC_000913	69935	0	C	T	consensus_score=262.2	frequency=1	major_base=T	major_cov=44/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/33
RA	543	.	NC_000913	69981	0	G	C	bias_e_value=4641650	bias_p_value=1	consensus_score=295.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=55/25	major_frequency=9.877e-01	minor_base=A	minor_cov=1/0	new_cov=55/25	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/25
RA	544	.	NC_000913	69983	0	A	G	bias_e_value=3116750	bias_p_value=0.671473	consensus_score=287.5	fisher_strand_p_value=0.308642	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=56/24	major_frequency=9.877e-01	minor_base=T	minor_cov=0/1	new_cov=56/24	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/25
RA	545	.	NC_000913	70289	0	G	T	consensus_score=395.1	frequency=1	major_base=T	major_cov=47/63	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/63	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/63
RA	546	.	NC_000913	70371	0	T	C	consensus_score=373.5	frequency=1	major_base=C	major_cov=49/57	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/57	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/57
RA	547	.	NC_000913	70434	0	C	T	consensus_score=372.8	frequency=1	major_base=T	major_cov=45/60	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/60	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/60
RA	548	.	NC_000913	70581	0	C	T	consensus_score=288.4	frequency=1	major_base=T	major_cov=42/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/40
RA	549	.	NC_000913	70740	0	T	G	consensus_score=262.5	frequency=1	major_base=G	major_cov=39/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/33
RA	550	.	NC_000913	71079	0	C	T	consensus_score=267.1	frequency=1	major_base=T	major_cov=43/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/38
RA	551	.	NC_000913	71082	0	T	C	consensus_score=295.6	frequency=1	major_base=C	major_cov=43/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/38
RA	552	.	NC_000913	71085	0	T	C	consensus_score=288.7	frequency=1	major_base=C	major_cov=43/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/38
RA	553	.	NC_000913	71109	0	T	C	consensus_score=332.1	frequency=1	major_base=C	major_cov=46/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/45
RA	554	.	NC_000913	71175	0	A	G	consensus_score=361.3	frequency=1	major_base=G	major_cov=48/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/50
RA	555	.	NC_000913	71214	0	T	C	consensus_score=356.2	frequency=1	major_base=C	major_cov=45/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/54
RA	556	.	NC_000913	71386	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=313.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=43/48	major_frequency=9.891e-01	minor_base=G	minor_cov=0/1	new_cov=43/48	polymorphism_frequency=9.891e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/49
RA	557	.	NC_000913	71543	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=318.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=50/37	major_frequency=9.886e-01	minor_base=A	minor_cov=1/0	new_cov=50/37	polymorphism_frequency=9.886e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=51/37
RA	558	.	NC_000913	71545	0	T	C	consensus_score=314.5	frequency=1	major_base=C	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	559	.	NC_000913	71548	0	C	T	consensus_score=306.4	frequency=1	major_base=T	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	560	.	NC_000913	71551	0	C	T	consensus_score=311.2	frequency=1	major_base=T	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	561	.	NC_000913	71552	0	T	C	consensus_score=321.9	frequency=1	major_base=C	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	562	.	NC_000913	71555	0	A	C	consensus_score=314.6	frequency=1	major_base=C	major_cov=51/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/37
RA	563	.	NC_000913	71569	0	T	C	consensus_score=321.0	frequency=1	major_base=C	major_cov=52/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/38
RA	564	.	NC_000913	71572	0	T	C	consensus_score=321.5	frequency=1	major_base=C	major_cov=52/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/39
RA	565	.	NC_000913	71584	0	T	C	consensus_score=348.7	frequency=1	major_base=C	major_cov=57/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=57/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=57/39
RA	566	.	NC_000913	71639	0	C	T	consensus_score=301.1	frequency=1	major_base=T	major_cov=50/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/41
RA	567	.	NC_000913	71644	0	T	C	consensus_score=332.9	frequency=1	major_base=C	major_cov=51/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=51/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=51/41
RA	568	.	NC_000913	71701	0	T	C	consensus_score=287.1	frequency=1	major_base=C	major_cov=47/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/39
RA	569	.	NC_000913	71764	0	T	A	consensus_score=254.8	frequency=1	major_base=A	major_cov=37/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/40
RA	570	.	NC_000913	71770	0	T	C	consensus_score=273.0	frequency=1	major_base=C	major_cov=34/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/40
RA	571	.	NC_000913	71806	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=270.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=37/43	major_frequency=9.877e-01	minor_base=G	minor_cov=0/1	new_cov=37/43	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=37/44
RA	572	.	NC_000913	71824	0	A	T	bias_e_value=4641600	bias_p_value=0.999988	consensus_score=271.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.995074	major_base=T	major_cov=35/45	major_frequency=9.877e-01	minor_base=G	minor_cov=0/1	new_cov=35/45	polymorphism_frequency=9.877e-01	polymorphism_score=-6.6	prediction=consensus	ref_cov=0/0	total_cov=35/46
RA	573	.	NC_000913	71857	0	T	A	consensus_score=270.4	frequency=1	major_base=A	major_cov=34/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/50
RA	574	.	NC_000913	71875	0	T	C	consensus_score=285.8	frequency=1	major_base=C	major_cov=32/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/50
RA	575	.	NC_000913	71899	0	A	G	bias_e_value=3426660	bias_p_value=0.738241	consensus_score=288.3	fisher_strand_p_value=0.37037	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=29/51	major_frequency=9.877e-01	minor_base=A	minor_cov=1/0	new_cov=29/51	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=30/51
RA	576	.	NC_000913	71902	0	A	G	bias_e_value=3447870	bias_p_value=0.742811	consensus_score=267.1	fisher_strand_p_value=0.375	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=29/50	major_frequency=9.875e-01	minor_base=A	minor_cov=1/0	new_cov=29/50	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=30/51
RA	577	.	NC_000913	71908	0	G	A	bias_e_value=3426660	bias_p_value=0.738241	consensus_score=270.0	fisher_strand_p_value=0.37037	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=29/51	major_frequency=9.877e-01	minor_base=G	minor_cov=1/0	new_cov=29/51	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=30/51
RA	578	.	NC_000913	71912	0	T	G	consensus_score=282.0	frequency=1	major_base=G	major_cov=28/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/50
RA	579	.	NC_000913	71962	0	G	A	consensus_score=264.0	frequency=1	major_base=A	major_cov=25/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/51
RA	580	.	NC_000913	71965	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=253.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=25/51	major_frequency=9.870e-01	minor_base=T	minor_cov=0/1	new_cov=25/51	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=25/52
RA	581	.	NC_000913	71968	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=256.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=25/51	major_frequency=9.870e-01	minor_base=C	minor_cov=0/1	new_cov=25/51	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=25/52
RA	582	.	NC_000913	71974	0	G	A	bias_e_value=3225370	bias_p_value=0.694875	consensus_score=267.5	fisher_strand_p_value=0.329114	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=25/53	major_frequency=9.873e-01	minor_base=C	minor_cov=1/0	new_cov=25/53	polymorphism_frequency=9.873e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/53
RA	583	.	NC_000913	71989	0	C	G	consensus_score=263.5	frequency=1	major_base=G	major_cov=23/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/51
RA	584	.	NC_000913	71995	0	T	C	consensus_score=259.4	frequency=1	major_base=C	major_cov=23/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/51
RA	585	.	NC_000913	72117	0	A	G	consensus_score=195.6	frequency=1	major_base=G	major_cov=17/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/38
RA	586	.	NC_000913	72121	0	A	T	consensus_score=186.9	frequency=1	major_base=T	major_cov=17/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/38
RA	587	.	NC_000913	72151	0	T	G	consensus_score=189.6	frequency=1	major_base=G	major_cov=17/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/36
RA	588	.	NC_000913	72152	0	G	A	consensus_score=179.4	frequency=1	major_base=A	major_cov=17/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/36
RA	589	.	NC_000913	72183	0	A	G	consensus_score=201.2	frequency=1	major_base=G	major_cov=21/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/34
RA	590	.	NC_000913	72184	0	C	T	consensus_score=188.1	frequency=1	major_base=T	major_cov=21/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/34
RA	591	.	NC_000913	72202	0	C	T	consensus_score=184.8	frequency=1	major_base=T	major_cov=22/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/30
RA	592	.	NC_000913	72217	0	C	T	consensus_score=177.8	frequency=1	major_base=T	major_cov=21/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/30
RA	593	.	NC_000913	72253	0	C	T	consensus_score=180.1	frequency=1	major_base=T	major_cov=29/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/21
RA	594	.	NC_000913	72290	0	A	T	consensus_score=193.3	frequency=1	major_base=T	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	595	.	NC_000913	72322	0	T	C	consensus_score=196.6	frequency=1	major_base=C	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	596	.	NC_000913	72325	0	T	C	consensus_score=194.4	frequency=1	major_base=C	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	597	.	NC_000913	72349	0	C	G	consensus_score=195.1	frequency=1	major_base=G	major_cov=35/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/22
RA	598	.	NC_000913	72361	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=182.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=39/19	major_frequency=9.831e-01	minor_base=C	minor_cov=1/0	new_cov=39/19	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/19
RA	599	.	NC_000913	72367	0	C	T	consensus_score=232.6	frequency=1	major_base=T	major_cov=42/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/21
RA	600	.	NC_000913	72381	0	G	A	bias_e_value=2769090	bias_p_value=0.596574	consensus_score=187.4	fisher_strand_p_value=0.25	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=45/14	major_frequency=9.833e-01	minor_base=G	minor_cov=0/1	new_cov=45/14	polymorphism_frequency=9.833e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=45/15
RA	601	.	NC_000913	72423	0	A	G	consensus_score=215.6	frequency=1	major_base=G	major_cov=42/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/17
RA	602	.	NC_000913	72493	0	T	C	consensus_score=207.0	frequency=1	major_base=C	major_cov=37/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/20
RA	603	.	NC_000913	72517	0	T	G	consensus_score=188.3	frequency=1	major_base=G	major_cov=34/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/20
RA	604	.	NC_000913	72547	0	C	A	consensus_score=171.2	frequency=1	major_base=A	major_cov=30/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/22
RA	605	.	NC_000913	72605	0	C	T	consensus_score=206.3	frequency=1	major_base=T	major_cov=30/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/32
RA	606	.	NC_000913	72614	0	A	G	bias_e_value=3902810	bias_p_value=0.840824	consensus_score=219.7	fisher_strand_p_value=0.491803	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=29/31	major_frequency=9.836e-01	minor_base=A	minor_cov=1/0	new_cov=29/31	polymorphism_frequency=9.836e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=30/32
RA	607	.	NC_000913	72661	0	T	C	consensus_score=214.5	frequency=1	major_base=C	major_cov=22/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/37
RA	608	.	NC_000913	72676	0	G	A	consensus_score=234.8	frequency=1	major_base=A	major_cov=26/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/38
RA	609	.	NC_000913	72691	0	C	T	consensus_score=217.9	frequency=1	major_base=T	major_cov=28/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/36
RA	610	.	NC_000913	72731	0	A	G	consensus_score=269.5	frequency=1	major_base=G	major_cov=34/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/43
RA	611	.	NC_000913	72733	0	A	C	consensus_score=278.5	frequency=1	major_base=C	major_cov=34/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/43
RA	612	.	NC_000913	72736	0	T	G	consensus_score=283.4	frequency=1	major_base=G	major_cov=34/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/43
RA	613	.	NC_000913	72745	0	T	A	consensus_score=294.1	frequency=1	major_base=A	major_cov=40/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/43
RA	614	.	NC_000913	72751	0	A	G	consensus_score=307.9	frequency=1	major_base=G	major_cov=40/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/44
RA	615	.	NC_000913	72799	0	A	G	consensus_score=325.5	frequency=1	major_base=G	major_cov=43/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/46
RA	616	.	NC_000913	72820	0	C	T	consensus_score=322.3	frequency=1	major_base=T	major_cov=47/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/44
RA	617	.	NC_000913	72862	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=303.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=47/39	major_frequency=9.885e-01	minor_base=C	minor_cov=1/0	new_cov=47/39	polymorphism_frequency=9.885e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=48/39
RA	618	.	NC_000913	72892	0	G	T	consensus_score=292.5	frequency=1	major_base=T	major_cov=48/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/34
RA	619	.	NC_000913	72928	0	T	C	consensus_score=341.9	frequency=1	major_base=C	major_cov=56/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=56/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/36
RA	620	.	NC_000913	72974	0	C	T	consensus_score=317.1	frequency=1	major_base=T	major_cov=47/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=47/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/41
RA	621	.	NC_000913	73001	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=300.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=45/40	major_frequency=9.884e-01	minor_base=T	minor_cov=1/0	new_cov=45/40	polymorphism_frequency=9.884e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/40
RA	622	.	NC_000913	73115	0	T	G	bias_e_value=4641650	bias_p_value=1	consensus_score=274.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=32/47	major_frequency=9.875e-01	minor_base=T	minor_cov=0/1	new_cov=32/47	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=32/48
RA	623	.	NC_000913	73121	0	G	A	consensus_score=276.0	frequency=1	major_base=A	major_cov=33/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/48
RA	624	.	NC_000913	73163	0	C	G	bias_e_value=3389130	bias_p_value=0.730156	consensus_score=250.2	fisher_strand_p_value=0.362319	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=24/44	major_frequency=9.855e-01	minor_base=T	minor_cov=1/0	new_cov=24/44	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/44
RA	625	.	NC_000913	73178	0	T	C	consensus_score=261.7	frequency=1	major_base=C	major_cov=24/50	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/50	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/50
RA	626	.	NC_000913	73193	0	C	G	consensus_score=266.0	frequency=1	major_base=G	major_cov=22/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/52
RA	627	.	NC_000913	73208	0	T	C	consensus_score=253.3	frequency=1	major_base=C	major_cov=18/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/54
RA	628	.	NC_000913	73214	0	G	A	bias_e_value=4641540	bias_p_value=0.999977	consensus_score=230.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.993203	major_base=A	major_cov=17/51	major_frequency=9.855e-01	minor_base=C	minor_cov=0/1	new_cov=17/51	polymorphism_frequency=9.855e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=0/1	total_cov=17/53
RA	629	.	NC_000913	73253	0	C	T	consensus_score=207.0	frequency=1	major_base=T	major_cov=21/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/43
RA	630	.	NC_000913	73319	0	T	C	consensus_score=177.1	frequency=1	major_base=C	major_cov=15/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/34
RA	631	.	NC_000913	73328	0	G	A	consensus_score=173.6	frequency=1	major_base=A	major_cov=15/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/32
RA	632	.	NC_000913	73331	0	A	G	consensus_score=174.4	frequency=1	major_base=G	major_cov=15/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/32
RA	633	.	NC_000913	73413	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=131.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=16/23	major_frequency=9.750e-01	minor_base=A	minor_cov=0/1	new_cov=16/23	polymorphism_frequency=9.750e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=16/24
RA	634	.	NC_000913	73445	0	C	A	consensus_score=131.4	frequency=1	major_base=A	major_cov=14/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/25
RA	635	.	NC_000913	73582	0	C	G	consensus_score=162.9	frequency=1	major_base=G	major_cov=27/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/19
RA	636	.	NC_000913	73604	0	T	C	consensus_score=167.4	frequency=1	major_base=C	major_cov=27/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/20
RA	637	.	NC_000913	73712	0	G	T	consensus_score=183.5	frequency=1	major_base=T	major_cov=37/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/17
RA	638	.	NC_000913	73744	0	A	G	consensus_score=197.1	frequency=1	major_base=G	major_cov=38/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/17
RA	639	.	NC_000913	73753	0	G	A	bias_e_value=3088880	bias_p_value=0.665471	consensus_score=174.7	fisher_strand_p_value=0.303571	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=39/16	major_frequency=9.821e-01	minor_base=G	minor_cov=0/1	new_cov=39/16	polymorphism_frequency=9.821e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=39/17
RA	640	.	NC_000913	73763	0	G	A	consensus_score=194.8	frequency=1	major_base=A	major_cov=37/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/20
RA	641	.	NC_000913	73777	0	G	T	consensus_score=198.8	frequency=1	major_base=T	major_cov=38/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/18
RA	642	.	NC_000913	73790	0	T	C	consensus_score=194.9	frequency=1	major_base=C	major_cov=37/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=37/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=37/19
RA	643	.	NC_000913	73853	0	C	T	consensus_score=218.9	frequency=1	major_base=T	major_cov=41/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/23
RA	644	.	NC_000913	73868	0	C	G	bias_e_value=4641650	bias_p_value=1	consensus_score=188.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=37/19	major_frequency=9.825e-01	minor_base=A	minor_cov=1/0	new_cov=37/19	polymorphism_frequency=9.825e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/19
RA	645	.	NC_000913	73919	0	C	T	consensus_score=216.6	frequency=1	major_base=T	major_cov=41/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/21
RA	646	.	NC_000913	73984	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=197.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=30/30	major_frequency=9.836e-01	minor_base=A	minor_cov=1/0	new_cov=30/30	polymorphism_frequency=9.836e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/30
RA	647	.	NC_000913	73985	0	A	G	consensus_score=214.6	frequency=1	major_base=G	major_cov=32/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/30
RA	648	.	NC_000913	74009	0	T	C	consensus_score=209.2	frequency=1	major_base=C	major_cov=31/29	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/29	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/29
RA	649	.	NC_000913	74015	0	C	T	consensus_score=231.9	frequency=1	major_base=T	major_cov=36/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/32
RA	650	.	NC_000913	74027	0	G	A	bias_e_value=2611940	bias_p_value=0.562718	consensus_score=236.2	fisher_strand_p_value=0.226408	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=33/38	major_frequency=9.726e-01	minor_base=G	minor_cov=2/0	new_cov=33/38	polymorphism_frequency=9.726e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=36/38
RA	651	.	NC_000913	74069	0	C	T	consensus_score=232.3	frequency=1	major_base=T	major_cov=28/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/41
RA	652	.	NC_000913	74081	0	C	T	bias_e_value=3582360	bias_p_value=0.771786	consensus_score=229.9	fisher_strand_p_value=0.405797	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=27/41	major_frequency=9.855e-01	minor_base=C	minor_cov=1/0	new_cov=27/41	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=28/41
RA	653	.	NC_000913	74084	0	A	G	bias_e_value=3963260	bias_p_value=0.853847	consensus_score=229.7	fisher_strand_p_value=0.510656	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=28/39	major_frequency=9.710e-01	minor_base=A	minor_cov=0/2	new_cov=28/39	polymorphism_frequency=9.710e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/2	total_cov=28/41
RA	654	.	NC_000913	74087	0	G	C	bias_e_value=2113210	bias_p_value=0.455271	consensus_score=227.7	fisher_strand_p_value=0.161125	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=26/41	major_frequency=9.710e-01	minor_base=T	minor_cov=2/0	new_cov=26/41	polymorphism_frequency=9.710e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/41
RA	655	.	NC_000913	74204	0	G	A	consensus_score=254.8	frequency=1	major_base=A	major_cov=19/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/51
RA	656	.	NC_000913	74209	0	A	G	consensus_score=234.5	frequency=1	major_base=G	major_cov=20/51	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/51	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/51
RA	657	.	NC_000913	74222	0	C	T	consensus_score=212.5	frequency=1	major_base=T	major_cov=18/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/48
RA	658	.	NC_000913	74234	0	A	G	bias_e_value=4641480	bias_p_value=0.999962	consensus_score=198.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.991295	major_base=G	major_cov=19/41	major_frequency=9.836e-01	minor_base=A	minor_cov=0/1	new_cov=19/41	polymorphism_frequency=9.836e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/1	total_cov=19/42
RA	659	.	NC_000913	74308	0	T	C	bias_e_value=4641520	bias_p_value=0.999971	consensus_score=229.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.992337	major_base=C	major_cov=22/42	major_frequency=9.846e-01	minor_base=T	minor_cov=0/1	new_cov=22/42	polymorphism_frequency=9.846e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=0/1	total_cov=22/43
RA	660	.	NC_000913	74321	0	T	C	consensus_score=223.0	frequency=1	major_base=C	major_cov=28/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/34
RA	661	.	NC_000913	75707	0	C	T	consensus_score=204.9	frequency=1	major_base=T	major_cov=27/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/38
RA	662	.	NC_000913	75752	0	C	.	bias_e_value=4618900	bias_p_value=0.995098	consensus_score=218.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.902631	major_base=.	major_cov=21/28	major_frequency=9.608e-01	minor_base=G	minor_cov=1/1	new_cov=21/28	polymorphism_frequency=9.608e-01	polymorphism_score=1.9	prediction=consensus	ref_cov=0/0	total_cov=22/29
RA	663	.	NC_000913	75753	0	A	G	bias_e_value=3707570	bias_p_value=0.79876	consensus_score=180.6	fisher_strand_p_value=0.442308	frequency=1	ks_quality_p_value=0.988006	major_base=G	major_cov=22/29	major_frequency=9.808e-01	minor_base=A	minor_cov=1/0	new_cov=22/29	polymorphism_frequency=9.808e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=23/29
RA	664	.	NC_000913	75757	1	.	G	bias_e_value=3624880	bias_p_value=0.780947	consensus_score=176.2	fisher_strand_p_value=0.442308	frequency=1	ks_quality_p_value=0.940742	major_base=G	major_cov=22/29	major_frequency=9.808e-01	minor_base=.	minor_cov=1/0	new_cov=22/29	polymorphism_frequency=9.808e-01	polymorphism_score=-2.3	prediction=consensus	ref_cov=1/0	total_cov=23/29
RA	665	.	NC_000913	75758	0	T	C	bias_e_value=3727800	bias_p_value=0.80312	consensus_score=171.3	fisher_strand_p_value=0.442308	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=22/29	major_frequency=9.808e-01	minor_base=T	minor_cov=1/0	new_cov=22/29	polymorphism_frequency=9.808e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=23/29
RA	666	.	NC_000913	75767	0	C	T	consensus_score=207.5	frequency=1	major_base=T	major_cov=29/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/33
RA	667	.	NC_000913	75806	0	A	G	consensus_score=244.7	frequency=1	major_base=G	major_cov=32/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/36
RA	668	.	NC_000913	75812	0	C	T	consensus_score=231.3	frequency=1	major_base=T	major_cov=32/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/37
RA	669	.	NC_000913	75830	0	A	G	consensus_score=244.6	frequency=1	major_base=G	major_cov=32/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/36
RA	670	.	NC_000913	75833	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=239.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999561	major_base=G	major_cov=32/35	major_frequency=9.853e-01	minor_base=T	minor_cov=0/1	new_cov=32/35	polymorphism_frequency=9.853e-01	polymorphism_score=-6.6	prediction=consensus	ref_cov=0/0	total_cov=32/36
RA	671	.	NC_000913	75851	0	A	G	bias_e_value=3878310	bias_p_value=0.835546	consensus_score=236.3	fisher_strand_p_value=0.485294	frequency=1	ks_quality_p_value=0.998246	major_base=G	major_cov=32/35	major_frequency=9.853e-01	minor_base=A	minor_cov=1/0	new_cov=32/35	polymorphism_frequency=9.853e-01	polymorphism_score=-5.8	prediction=consensus	ref_cov=1/0	total_cov=33/35
RA	672	.	NC_000913	75854	0	G	C	bias_e_value=4641650	bias_p_value=1	consensus_score=240.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=33/35	major_frequency=9.855e-01	minor_base=T	minor_cov=0/1	new_cov=33/35	polymorphism_frequency=9.855e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/36
RA	673	.	NC_000913	75860	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=228.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=33/34	major_frequency=9.853e-01	minor_base=C	minor_cov=1/0	new_cov=33/34	polymorphism_frequency=9.853e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=35/34
RA	674	.	NC_000913	75863	0	A	G	consensus_score=246.9	frequency=1	major_base=G	major_cov=35/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/34
RA	675	.	NC_000913	75869	0	T	G	consensus_score=239.5	frequency=1	major_base=G	major_cov=35/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/32
RA	676	.	NC_000913	75875	0	T	C	bias_e_value=4632220	bias_p_value=0.997969	consensus_score=231.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.936947	major_base=C	major_cov=34/32	major_frequency=9.851e-01	minor_base=A	minor_cov=1/0	new_cov=34/32	polymorphism_frequency=9.851e-01	polymorphism_score=-5.4	prediction=consensus	ref_cov=0/0	total_cov=35/32
RA	677	.	NC_000913	75881	0	T	C	consensus_score=225.7	frequency=1	major_base=C	major_cov=34/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/30
RA	678	.	NC_000913	75887	0	T	C	consensus_score=215.3	frequency=1	major_base=C	major_cov=34/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/28
RA	679	.	NC_000913	75890	0	A	G	bias_e_value=4641640	bias_p_value=0.999998	consensus_score=214.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997887	major_base=G	major_cov=33/28	major_frequency=9.839e-01	minor_base=A	minor_cov=1/0	new_cov=33/28	polymorphism_frequency=9.839e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=1/0	total_cov=34/28
RA	680	.	NC_000913	75893	0	T	C	consensus_score=213.8	frequency=1	major_base=C	major_cov=33/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/28
RA	681	.	NC_000913	75899	0	A	C	bias_e_value=3870550	bias_p_value=0.833873	consensus_score=191.9	fisher_strand_p_value=0.482143	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=29/26	major_frequency=9.821e-01	minor_base=T	minor_cov=0/1	new_cov=29/26	polymorphism_frequency=9.821e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	682	.	NC_000913	75901	0	C	G	consensus_score=200.1	frequency=1	major_base=G	major_cov=29/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	683	.	NC_000913	75902	0	A	C	bias_e_value=4641650	bias_p_value=1	consensus_score=192.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=28/27	major_frequency=9.821e-01	minor_base=T	minor_cov=1/0	new_cov=28/27	polymorphism_frequency=9.821e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	684	.	NC_000913	75905	0	G	A	consensus_score=193.1	frequency=1	major_base=A	major_cov=29/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	685	.	NC_000913	75908	0	G	A	consensus_score=196.1	frequency=1	major_base=A	major_cov=29/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/27
RA	686	.	NC_000913	75920	0	G	C	consensus_score=238.6	frequency=1	major_base=C	major_cov=33/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/33
RA	687	.	NC_000913	75938	0	T	A	bias_e_value=4641650	bias_p_value=1	consensus_score=222.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=31/32	major_frequency=9.844e-01	minor_base=C	minor_cov=1/0	new_cov=31/32	polymorphism_frequency=9.844e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/32
RA	688	.	NC_000913	75950	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=228.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=32/34	major_frequency=9.851e-01	minor_base=A	minor_cov=0/1	new_cov=32/34	polymorphism_frequency=9.851e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=32/35
RA	689	.	NC_000913	75953	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=239.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=32/34	major_frequency=9.851e-01	minor_base=T	minor_cov=0/1	new_cov=32/34	polymorphism_frequency=9.851e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=32/35
RA	690	.	NC_000913	75966	0	G	T	consensus_score=203.3	frequency=1	major_base=T	major_cov=30/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/34
RA	691	.	NC_000913	75967	0	T	C	consensus_score=223.5	frequency=1	major_base=C	major_cov=30/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=30/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=30/34
RA	692	.	NC_000913	75984	0	T	C	consensus_score=285.6	frequency=1	major_base=C	major_cov=43/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/36
RA	693	.	NC_000913	75985	0	C	T	consensus_score=263.0	frequency=1	major_base=T	major_cov=43/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/36
RA	694	.	NC_000913	76000	0	T	C	consensus_score=293.3	frequency=1	major_base=C	major_cov=43/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/39
RA	695	.	NC_000913	76082	0	T	C	consensus_score=299.9	frequency=1	major_base=C	major_cov=43/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/39
RA	696	.	NC_000913	76086	0	G	A	consensus_score=277.5	frequency=1	major_base=A	major_cov=43/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/39
RA	697	.	NC_000913	76283	0	C	T	bias_e_value=3769490	bias_p_value=0.8121	consensus_score=295.8	fisher_strand_p_value=0.453488	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=47/38	major_frequency=9.884e-01	minor_base=G	minor_cov=0/1	new_cov=47/38	polymorphism_frequency=9.884e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/39
RA	698	.	NC_000913	76334	0	G	A	bias_e_value=3866720	bias_p_value=0.833047	consensus_score=275.9	fisher_strand_p_value=0.481013	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=41/37	major_frequency=9.873e-01	minor_base=G	minor_cov=0/1	new_cov=41/37	polymorphism_frequency=9.873e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=41/38
RA	699	.	NC_000913	76358	0	C	A	consensus_score=291.9	frequency=1	major_base=A	major_cov=44/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/37
RA	700	.	NC_000913	76364	0	G	A	consensus_score=275.4	frequency=1	major_base=A	major_cov=42/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/35
RA	701	.	NC_000913	76478	0	A	G	consensus_score=280.2	frequency=1	major_base=G	major_cov=42/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=42/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/39
RA	702	.	NC_000913	76576	0	G	A	consensus_score=241.1	frequency=1	major_base=A	major_cov=32/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/37
RA	703	.	NC_000913	76700	0	A	G	consensus_score=247.6	frequency=1	major_base=G	major_cov=34/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/38
RA	704	.	NC_000913	76727	0	G	A	bias_e_value=3729980	bias_p_value=0.803588	consensus_score=250.9	fisher_strand_p_value=0.444444	frequency=1	ks_quality_p_value=0.996485	major_base=A	major_cov=31/40	major_frequency=9.861e-01	minor_base=G	minor_cov=1/0	new_cov=31/40	polymorphism_frequency=9.861e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=1/0	total_cov=32/40
RA	705	.	NC_000913	76775	0	A	T	consensus_score=208.6	frequency=1	major_base=T	major_cov=23/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/41
RA	706	.	NC_000913	76862	0	G	A	consensus_score=216.2	frequency=1	major_base=A	major_cov=21/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/38
RA	707	.	NC_000913	77021	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=135.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=19/26	major_frequency=9.783e-01	minor_base=G	minor_cov=0/1	new_cov=19/26	polymorphism_frequency=9.783e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/27
RA	708	.	NC_000913	77027	0	A	G	consensus_score=135.6	frequency=1	major_base=G	major_cov=17/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/25
RA	709	.	NC_000913	77117	0	G	A	consensus_score=143.2	frequency=1	major_base=A	major_cov=21/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/19
RA	710	.	NC_000913	77776	0	C	A	consensus_score=310.5	frequency=1	major_base=A	major_cov=58/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=58/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/33
RA	711	.	NC_000913	78406	0	A	T	bias_e_value=3697310	bias_p_value=0.796551	consensus_score=351.2	fisher_strand_p_value=0.434343	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=56/42	major_frequency=9.899e-01	minor_base=C	minor_cov=0/1	new_cov=56/42	polymorphism_frequency=9.899e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/43
RA	712	.	NC_000913	78520	0	C	A	bias_e_value=3614110	bias_p_value=0.778625	consensus_score=334.8	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=0.964739	major_base=A	major_cov=60/44	major_frequency=9.905e-01	minor_base=C	minor_cov=0/1	new_cov=60/44	polymorphism_frequency=9.905e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=60/45
RA	713	.	NC_000913	78524	0	A	C	bias_e_value=4641650	bias_p_value=1	consensus_score=346.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=59/45	major_frequency=9.905e-01	minor_base=A	minor_cov=1/0	new_cov=59/45	polymorphism_frequency=9.905e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=60/45
RA	714	.	NC_000913	78533	0	A	C	consensus_score=397.1	frequency=1	major_base=C	major_cov=61/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/48
RA	715	.	NC_000913	78761	0	G	A	consensus_score=357.1	frequency=1	major_base=A	major_cov=52/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/54
RA	716	.	NC_000913	79040	0	A	G	consensus_score=281.0	frequency=1	major_base=G	major_cov=39/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/38
RA	717	.	NC_000913	80529	0	C	G	bias_e_value=4641650	bias_p_value=1	consensus_score=254.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=39/32	major_frequency=9.726e-01	minor_base=C	minor_cov=1/1	new_cov=39/32	polymorphism_frequency=9.726e-01	polymorphism_score=-3.0	prediction=consensus	ref_cov=1/1	total_cov=40/34
RA	718	.	NC_000913	82633	0	T	G	bias_e_value=3899070	bias_p_value=0.840019	consensus_score=308.8	fisher_strand_p_value=0.494118	frequency=1	ks_quality_p_value=0.993022	major_base=G	major_cov=43/41	major_frequency=9.882e-01	minor_base=T	minor_cov=0/1	new_cov=43/41	polymorphism_frequency=9.882e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=0/1	total_cov=43/42
RA	719	.	NC_000913	82894	0	T	G	consensus_score=259.9	frequency=1	major_base=G	major_cov=27/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/45
RA	720	.	NC_000913	82909	0	C	T	consensus_score=252.3	frequency=1	major_base=T	major_cov=27/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/48
RA	721	.	NC_000913	82933	0	G	A	consensus_score=236.1	frequency=1	major_base=A	major_cov=23/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/46
RA	722	.	NC_000913	82957	0	C	T	consensus_score=188.9	frequency=1	major_base=T	major_cov=20/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/39
RA	723	.	NC_000913	83179	0	C	T	consensus_score=227.5	frequency=1	major_base=T	major_cov=45/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/20
RA	724	.	NC_000913	83182	0	G	A	consensus_score=215.4	frequency=1	major_base=A	major_cov=45/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/20
RA	725	.	NC_000913	83296	0	T	C	consensus_score=271.2	frequency=1	major_base=C	major_cov=52/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/26
RA	726	.	NC_000913	83317	0	A	G	bias_e_value=4639850	bias_p_value=0.999613	consensus_score=238.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.972296	major_base=G	major_cov=43/24	major_frequency=9.853e-01	minor_base=.	minor_cov=1/0	new_cov=43/24	polymorphism_frequency=9.853e-01	polymorphism_score=-2.4	prediction=consensus	ref_cov=0/0	total_cov=44/24
RA	727	.	NC_000913	83344	0	G	A	consensus_score=251.6	frequency=1	major_base=A	major_cov=44/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/30
RA	728	.	NC_000913	83359	0	C	T	consensus_score=284.4	frequency=1	major_base=T	major_cov=49/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/32
RA	729	.	NC_000913	83371	0	G	A	consensus_score=273.2	frequency=1	major_base=A	major_cov=50/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/32
RA	730	.	NC_000913	83383	0	G	A	bias_e_value=3610170	bias_p_value=0.777777	consensus_score=268.4	fisher_strand_p_value=0.4125	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=47/32	major_frequency=9.875e-01	minor_base=C	minor_cov=0/1	new_cov=47/32	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/33
RA	731	.	NC_000913	84251	0	G	T	consensus_score=415.3	frequency=1	major_base=T	major_cov=60/60	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=60/60	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=60/60
RA	732	.	NC_000913	84267	0	G	C	bias_e_value=4641650	bias_p_value=1	consensus_score=421.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=55/61	major_frequency=9.915e-01	minor_base=T	minor_cov=0/1	new_cov=55/61	polymorphism_frequency=9.915e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/62
RA	733	.	NC_000913	84305	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=378.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=49/58	major_frequency=9.907e-01	minor_base=T	minor_cov=0/1	new_cov=49/58	polymorphism_frequency=9.907e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=50/59
RA	734	.	NC_000913	84306	0	C	G	bias_e_value=1074900	bias_p_value=0.231577	consensus_score=334.6	fisher_strand_p_value=0.0609882	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=50/54	major_frequency=9.541e-01	minor_base=T	minor_cov=0/5	new_cov=50/54	polymorphism_frequency=9.541e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/59
RA	735	.	NC_000913	84415	0	A	G	consensus_score=346.8	frequency=1	major_base=G	major_cov=50/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/48
RA	736	.	NC_000913	85481	0	T	C	bias_e_value=2046580	bias_p_value=0.440916	consensus_score=442.3	fisher_strand_p_value=0.153366	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=50/80	major_frequency=9.848e-01	minor_base=A	minor_cov=2/0	new_cov=50/80	polymorphism_frequency=9.848e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/80
RA	737	.	NC_000913	86241	0	A	G	consensus_score=257.7	frequency=1	major_base=G	major_cov=33/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/38
RA	738	.	NC_000913	86271	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=211.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=22/38	major_frequency=9.836e-01	minor_base=C	minor_cov=0/1	new_cov=22/38	polymorphism_frequency=9.836e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=22/39
RA	739	.	NC_000913	86315	0	C	T	consensus_score=201.2	frequency=1	major_base=T	major_cov=24/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/34
RA	740	.	NC_000913	86345	0	G	C	bias_e_value=3674790	bias_p_value=0.791699	consensus_score=212.3	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=26/36	major_frequency=9.841e-01	minor_base=A	minor_cov=1/0	new_cov=26/36	polymorphism_frequency=9.841e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/36
RA	741	.	NC_000913	86658	0	A	G	consensus_score=314.8	frequency=1	major_base=G	major_cov=53/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/34
RA	742	.	NC_000913	87410	0	C	T	consensus_score=254.4	frequency=1	major_base=T	major_cov=41/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/34
RA	743	.	NC_000913	89089	0	C	A	consensus_score=289.7	frequency=1	major_base=A	major_cov=55/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=55/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=55/31
RA	744	.	NC_000913	89103	0	G	C	consensus_score=299.3	frequency=1	major_base=C	major_cov=53/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/28
RA	745	.	NC_000913	89143	0	A	G	consensus_score=327.0	frequency=1	major_base=G	major_cov=64/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=64/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=64/27
RA	746	.	NC_000913	89145	0	G	T	consensus_score=328.2	frequency=1	major_base=T	major_cov=64/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=64/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=64/27
RA	747	.	NC_000913	89239	0	G	A	consensus_score=350.1	frequency=1	major_base=A	major_cov=64/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=64/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=64/37
RA	748	.	NC_000913	89241	0	C	A	bias_e_value=4641530	bias_p_value=0.999975	consensus_score=349.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.992897	major_base=A	major_cov=63/37	major_frequency=9.901e-01	minor_base=G	minor_cov=1/0	new_cov=63/37	polymorphism_frequency=9.901e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=0/0	total_cov=64/37
RA	749	.	NC_000913	89263	0	A	G	consensus_score=417.9	frequency=1	major_base=G	major_cov=67/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=67/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=67/47
RA	750	.	NC_000913	89316	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=441.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.999865	major_base=C	major_cov=69/52	major_frequency=9.918e-01	minor_base=.	minor_cov=1/0	new_cov=69/52	polymorphism_frequency=9.918e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/0	total_cov=70/52
RA	751	.	NC_000913	89321	0	A	G	bias_e_value=4343.69	bias_p_value=0.000935806	consensus_score=365.0	fisher_strand_p_value=9.0794e-05	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=65/43	major_frequency=9.076e-01	minor_base=T	minor_cov=0/11	new_cov=65/43	polymorphism_frequency=9.076e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=67/54
RA	752	.	NC_000913	89471	0	T	G	consensus_score=475.3	frequency=1	major_base=G	major_cov=57/78	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=57/78	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=57/78
RA	753	.	NC_000913	89570	0	A	C	bias_e_value=3367700	bias_p_value=0.725538	consensus_score=391.3	fisher_strand_p_value=0.357798	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=38/70	major_frequency=9.908e-01	minor_base=A	minor_cov=1/0	new_cov=38/70	polymorphism_frequency=9.908e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=39/70
RA	754	.	NC_000913	89699	0	T	C	bias_e_value=3223580	bias_p_value=0.69449	consensus_score=251.9	fisher_strand_p_value=0.328767	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=23/49	major_frequency=9.863e-01	minor_base=A	minor_cov=1/0	new_cov=23/49	polymorphism_frequency=9.863e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/49
RA	755	.	NC_000913	89754	0	T	C	consensus_score=257.5	frequency=1	major_base=C	major_cov=25/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/45
RA	756	.	NC_000913	90432	0	A	G	consensus_score=305.3	frequency=1	major_base=G	major_cov=36/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/47
RA	757	.	NC_000913	90435	0	T	C	consensus_score=290.5	frequency=1	major_base=C	major_cov=36/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/47
RA	758	.	NC_000913	91904	0	G	A	consensus_score=315.4	frequency=1	major_base=A	major_cov=52/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/40
RA	759	.	NC_000913	91916	0	C	T	consensus_score=328.1	frequency=1	major_base=T	major_cov=52/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/40
RA	760	.	NC_000913	91922	0	G	A	bias_e_value=3945810	bias_p_value=0.850088	consensus_score=288.6	fisher_strand_p_value=0.505107	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=49/38	major_frequency=9.775e-01	minor_base=C	minor_cov=2/0	new_cov=49/38	polymorphism_frequency=9.775e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=0/0	total_cov=51/38
RA	761	.	NC_000913	91949	0	C	T	bias_e_value=3801670	bias_p_value=0.819034	consensus_score=326.4	fisher_strand_p_value=0.462366	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=50/42	major_frequency=9.892e-01	minor_base=G	minor_cov=0/1	new_cov=50/42	polymorphism_frequency=9.892e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=51/43
RA	762	.	NC_000913	92096	0	A	T	bias_e_value=3503820	bias_p_value=0.754865	consensus_score=265.2	fisher_strand_p_value=0.3875	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=30/49	major_frequency=9.875e-01	minor_base=C	minor_cov=1/0	new_cov=30/49	polymorphism_frequency=9.875e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/49
RA	763	.	NC_000913	92162	0	C	T	consensus_score=263.5	frequency=1	major_base=T	major_cov=33/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/45
RA	764	.	NC_000913	92327	0	G	T	bias_e_value=3836480	bias_p_value=0.826533	consensus_score=240.5	fisher_strand_p_value=0.472222	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=33/38	major_frequency=9.861e-01	minor_base=C	minor_cov=1/0	new_cov=33/38	polymorphism_frequency=9.861e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/38
RA	765	.	NC_000913	92354	0	A	G	consensus_score=266.1	frequency=1	major_base=G	major_cov=32/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/40
RA	766	.	NC_000913	92687	0	A	G	bias_e_value=3682570	bias_p_value=0.793376	consensus_score=258.9	fisher_strand_p_value=0.430556	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=41/30	major_frequency=9.861e-01	minor_base=T	minor_cov=0/1	new_cov=41/30	polymorphism_frequency=9.861e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/31
RA	767	.	NC_000913	92810	0	T	C	consensus_score=287.8	frequency=1	major_base=C	major_cov=40/43	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/43	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/43
RA	768	.	NC_000913	92843	0	A	G	consensus_score=316.2	frequency=1	major_base=G	major_cov=46/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/42
RA	769	.	NC_000913	94278	0	G	A	consensus_score=207.6	frequency=1	major_base=A	major_cov=34/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/27
RA	770	.	NC_000913	134256	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=277.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=46/34	major_frequency=9.877e-01	minor_base=C	minor_cov=1/0	new_cov=46/34	polymorphism_frequency=9.877e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/34
RA	771	.	NC_000913	246747	0	G	T	consensus_score=347.5	frequency=1	major_base=T	major_cov=52/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=52/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/48
RA	772	.	NC_000913	480295	0	G	A	consensus_score=448.2	frequency=1	major_base=A	major_cov=61/71	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/71	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/71
RA	773	.	NC_000913	480296	0	G	A	consensus_score=447.4	frequency=1	major_base=A	major_cov=61/71	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=61/71	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=61/71
RA	774	.	NC_000913	527504	0	C	A	bias_e_value=4.77495e-09	bias_p_value=1.02872e-15	consensus_reject=FREQUENCY_CUTOFF	consensus_score=414.3	fisher_strand_p_value=2.62572e-17	frequency=2.278e-01	ks_quality_p_value=1	major_base=C	major_cov=43/96	major_frequency=7.722e-01	minor_base=A	minor_cov=41/0	new_cov=41/0	polymorphism_frequency=2.278e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=43/96	total_cov=84/96
RA	775	.	NC_000913	690948	0	G	A	consensus_score=284.5	frequency=1	major_base=A	major_cov=27/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/52
RA	776	.	NC_000913	700038	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=227.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=41/24	major_frequency=9.848e-01	minor_base=C	minor_cov=1/0	new_cov=41/24	polymorphism_frequency=9.848e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=43/24
RA	777	.	NC_000913	809217	0	C	A	bias_e_value=4641650	bias_p_value=1	consensus_score=206.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=37/27	major_frequency=9.846e-01	minor_base=C	minor_cov=1/0	new_cov=37/27	polymorphism_frequency=9.846e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=38/27
RA	778	.	NC_000913	809218	0	A	G	consensus_score=233.9	frequency=1	major_base=G	major_cov=38/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/27
RA	779	.	NC_000913	847955	0	G	A	bias_e_value=4.74771e-06	bias_p_value=1.02285e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=183.7	fisher_strand_p_value=3.18877e-14	frequency=2.992e-01	ks_quality_p_value=1	major_base=G	major_cov=64/25	major_frequency=7.008e-01	minor_base=A	minor_cov=1/37	new_cov=1/37	polymorphism_frequency=2.992e-01	polymorphism_score=47.1	prediction=polymorphism	ref_cov=64/25	total_cov=66/62
RA	780	.	NC_000913	968837	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=257.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=38/39	major_frequency=9.872e-01	minor_base=C	minor_cov=1/0	new_cov=38/39	polymorphism_frequency=9.872e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/39
RA	781	.	NC_000913	1031379	0	G	C	bias_e_value=2469030	bias_p_value=0.53193	consensus_reject=FREQUENCY_CUTOFF	consensus_score=10.3	fisher_strand_p_value=0.391304	frequency=5.926e-01	ks_quality_p_value=0.527213	major_base=C	major_cov=13/3	major_frequency=5.926e-01	minor_base=G	minor_cov=7/4	new_cov=13/3	polymorphism_frequency=5.926e-01	polymorphism_score=34.7	prediction=polymorphism	ref_cov=7/4	total_cov=21/8
RA	782	.	NC_000913	1040126	0	G	T	consensus_score=379.8	frequency=1	major_base=T	major_cov=48/62	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/62	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/62
RA	783	.	NC_000913	1041585	0	C	T	bias_e_value=3414060	bias_p_value=0.735526	consensus_score=229.1	fisher_strand_p_value=0.367647	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=43/24	major_frequency=9.853e-01	minor_base=G	minor_cov=0/1	new_cov=43/24	polymorphism_frequency=9.853e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/25
RA	784	.	NC_000913	1061935	0	G	A	bias_e_value=3580700	bias_p_value=0.771427	consensus_score=200.1	fisher_strand_p_value=0.419355	frequency=1	ks_quality_p_value=0.966722	major_base=A	major_cov=36/25	major_frequency=9.839e-01	minor_base=.	minor_cov=0/1	new_cov=36/25	polymorphism_frequency=9.839e-01	polymorphism_score=-2.5	prediction=consensus	ref_cov=0/0	total_cov=36/26
RA	785	.	NC_000913	1062188	0	C	T	consensus_score=281.8	frequency=1	major_base=T	major_cov=44/34	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/34	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/34
RA	786	.	NC_000913	1086443	0	C	T	consensus_score=399.1	frequency=1	major_base=T	major_cov=69/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=69/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=69/46
RA	787	.	NC_000913	1111727	0	C	T	bias_e_value=1623910	bias_p_value=0.349856	consensus_score=292.0	fisher_strand_p_value=0.10867	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=40/46	major_frequency=9.663e-01	minor_base=C	minor_cov=3/0	new_cov=40/46	polymorphism_frequency=9.663e-01	polymorphism_score=NA	prediction=consensus	ref_cov=3/0	total_cov=43/46
RA	788	.	NC_000913	1111728	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=305.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=43/45	major_frequency=9.888e-01	minor_base=G	minor_cov=0/1	new_cov=43/45	polymorphism_frequency=9.888e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/46
RA	789	.	NC_000913	1169836	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=280.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=38/39	major_frequency=9.872e-01	minor_base=A	minor_cov=1/0	new_cov=38/39	polymorphism_frequency=9.872e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=39/39
RA	790	.	NC_000913	1189980	0	A	G	consensus_score=314.8	frequency=1	major_base=G	major_cov=33/52	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=33/52	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=33/52
RA	791	.	NC_000913	1196220	0	C	T	consensus_score=159.3	frequency=1	major_base=T	major_cov=31/27	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/27	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/27
RA	792	.	NC_000913	1196232	0	C	T	consensus_score=142.2	frequency=1	major_base=T	major_cov=31/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/21
RA	793	.	NC_000913	1196245	0	T	C	consensus_score=126.9	frequency=1	major_base=C	major_cov=26/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/19
RA	794	.	NC_000913	1196247	0	A	G	bias_e_value=3612400	bias_p_value=0.778258	consensus_score=127.2	fisher_strand_p_value=0.413043	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=27/18	major_frequency=9.783e-01	minor_base=A	minor_cov=0/1	new_cov=27/18	polymorphism_frequency=9.783e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=27/19
RA	795	.	NC_000913	1196277	0	C	T	consensus_score=92.5	frequency=1	major_base=T	major_cov=23/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/15
RA	796	.	NC_000913	1196280	0	G	C	bias_e_value=2856580	bias_p_value=0.615423	consensus_score=79.0	fisher_strand_p_value=0.263869	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=20/15	major_frequency=9.211e-01	minor_base=A	minor_cov=3/0	new_cov=20/15	polymorphism_frequency=9.211e-01	polymorphism_score=-6.4	prediction=consensus	ref_cov=0/0	total_cov=23/15
RA	797	.	NC_000913	1196283	0	A	G	consensus_score=101.7	frequency=1	major_base=G	major_cov=23/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/15
RA	798	.	NC_000913	1196292	0	C	T	consensus_score=89.2	frequency=1	major_base=T	major_cov=23/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/14
RA	799	.	NC_000913	1196304	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=76.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=21/11	major_frequency=9.697e-01	minor_base=C	minor_cov=1/0	new_cov=21/11	polymorphism_frequency=9.697e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/11
RA	800	.	NC_000913	1196316	0	T	A	consensus_score=63.6	frequency=1	major_base=A	major_cov=20/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/9
RA	801	.	NC_000913	1196325	0	A	G	consensus_score=50.7	deleted=1	frequency=1	major_base=G	major_cov=16/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/8
RA	802	.	NC_000913	1196352	0	C	A	consensus_score=36.6	deleted=1	frequency=1	major_base=A	major_cov=12/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=12/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=12/7
RA	803	.	NC_000913	1242609	0	C	T	consensus_score=271.5	frequency=1	major_base=T	major_cov=41/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/40
RA	804	.	NC_000913	1286870	0	C	A	bias_e_value=1175470	bias_p_value=0.253244	consensus_reject=FREQUENCY_CUTOFF	consensus_score=124.6	fisher_strand_p_value=0.068911	frequency=2.500e-01	ks_quality_p_value=1	major_base=C	major_cov=16/29	major_frequency=7.500e-01	minor_base=A	minor_cov=10/5	new_cov=10/5	polymorphism_frequency=2.500e-01	polymorphism_score=22.6	prediction=polymorphism	ref_cov=16/29	total_cov=27/34
RA	805	.	NC_000913	1301992	0	A	T	consensus_score=321.3	frequency=1	major_base=T	major_cov=35/61	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/61	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/61
RA	806	.	NC_000913	1306736	0	T	G	consensus_score=319.4	frequency=1	major_base=G	major_cov=49/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/38
RA	807	.	NC_000913	1310770	0	A	G	bias_e_value=3422940	bias_p_value=0.737441	consensus_score=503.7	fisher_strand_p_value=0.369565	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=87/50	major_frequency=9.928e-01	minor_base=A	minor_cov=0/1	new_cov=87/50	polymorphism_frequency=9.928e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=87/51
RA	808	.	NC_000913	1337394	0	A	G	bias_e_value=3505000	bias_p_value=0.755119	consensus_score=329.7	fisher_strand_p_value=0.418367	frequency=1	ks_quality_p_value=0.926861	major_base=G	major_cov=57/40	major_frequency=9.898e-01	minor_base=A	minor_cov=0/1	new_cov=57/40	polymorphism_frequency=9.898e-01	polymorphism_score=-4.4	prediction=consensus	ref_cov=0/1	total_cov=57/41
RA	809	.	NC_000913	1357202	0	C	T	consensus_score=319.9	frequency=1	major_base=T	major_cov=48/49	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=48/49	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=48/49
RA	810	.	NC_000913	1358859	0	T	C	consensus_score=231.2	frequency=1	major_base=C	major_cov=40/25	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=40/25	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/25
RA	811	.	NC_000913	1449738	0	C	T	consensus_score=283.8	frequency=1	major_base=T	major_cov=45/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=45/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/39
RA	812	.	NC_000913	1466210	0	G	A	bias_e_value=4557580	bias_p_value=0.981889	consensus_reject=FREQUENCY_CUTOFF	consensus_score=226.9	fisher_strand_p_value=0.815815	frequency=2.110e-01	ks_quality_p_value=1	major_base=G	major_cov=38/48	major_frequency=7.890e-01	minor_base=A	minor_cov=11/12	new_cov=11/12	polymorphism_frequency=2.110e-01	polymorphism_score=46.7	prediction=polymorphism	ref_cov=38/48	total_cov=49/60
RA	813	.	NC_000913	1466393	0	C	T	bias_e_value=64225	bias_p_value=0.0138367	consensus_reject=FREQUENCY_CUTOFF	consensus_score=113.4	fisher_strand_p_value=0.00190502	frequency=2.000e-01	ks_quality_p_value=1	major_base=C	major_cov=23/25	major_frequency=8.000e-01	minor_base=T	minor_cov=0/12	new_cov=0/12	polymorphism_frequency=2.000e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=23/25	total_cov=23/37
RA	814	.	NC_000913	1475514	0	A	G	consensus_score=396.1	frequency=1	major_base=G	major_cov=53/53	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/53	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/53
RA	815	.	NC_000913	1502768	0	G	A	bias_e_value=2.75319	bias_p_value=5.93149e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=217.1	fisher_strand_p_value=3.25164e-08	frequency=2.054e-01	ks_quality_p_value=1	major_base=G	major_cov=53/36	major_frequency=7.946e-01	minor_base=A	minor_cov=0/23	new_cov=0/23	polymorphism_frequency=2.054e-01	polymorphism_score=18.7	prediction=polymorphism	ref_cov=53/36	total_cov=53/59
RA	816	.	NC_000913	1502770	0	T	C	bias_e_value=0.0782908	bias_p_value=1.6867e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=193.8	fisher_strand_p_value=7.67086e-10	frequency=2.411e-01	ks_quality_p_value=1	major_base=T	major_cov=53/32	major_frequency=7.589e-01	minor_base=C	minor_cov=0/27	new_cov=0/27	polymorphism_frequency=2.411e-01	polymorphism_score=27.2	prediction=polymorphism	ref_cov=53/32	total_cov=53/59
RA	817	.	NC_000913	1502772	0	G	A	bias_e_value=0.0159661	bias_p_value=3.43975e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=180.3	fisher_strand_p_value=1.45436e-10	frequency=2.545e-01	ks_quality_p_value=1	major_base=G	major_cov=53/29	major_frequency=7.455e-01	minor_base=A	minor_cov=0/28	new_cov=0/28	polymorphism_frequency=2.545e-01	polymorphism_score=28.9	prediction=polymorphism	ref_cov=53/29	total_cov=53/59
RA	818	.	NC_000913	1643679	0	A	T	consensus_score=258.9	frequency=1	major_base=T	major_cov=36/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/42
RA	819	.	NC_000913	1652331	0	T	C	bias_e_value=3880810	bias_p_value=0.836083	consensus_score=444.0	fisher_strand_p_value=0.491803	frequency=1	ks_quality_p_value=0.986543	major_base=C	major_cov=59/62	major_frequency=9.918e-01	minor_base=G	minor_cov=1/0	new_cov=59/62	polymorphism_frequency=9.918e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/0	total_cov=60/62
RA	820	.	NC_000913	1697301	0	G	T	bias_e_value=3.82861e-05	bias_p_value=8.24837e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=223.5	fisher_strand_p_value=2.75685e-13	frequency=2.593e-01	ks_quality_p_value=1	major_base=G	major_cov=60/20	major_frequency=7.407e-01	minor_base=T	minor_cov=0/28	new_cov=0/28	polymorphism_frequency=2.593e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=60/20	total_cov=60/48
RA	821	.	NC_000913	1721136	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=456.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=54/79	major_frequency=9.925e-01	minor_base=G	minor_cov=0/1	new_cov=54/79	polymorphism_frequency=9.925e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/80
RA	822	.	NC_000913	1776715	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=328.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=50/49	major_frequency=9.900e-01	minor_base=G	minor_cov=0/1	new_cov=50/49	polymorphism_frequency=9.900e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=50/51
RA	823	.	NC_000913	1894839	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=371.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=58/42	major_frequency=9.901e-01	minor_base=A	minor_cov=1/0	new_cov=58/42	polymorphism_frequency=9.901e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=59/42
RA	824	.	NC_000913	1901209	0	C	T	bias_e_value=151.553	bias_p_value=3.26507e-05	consensus_reject=FREQUENCY_CUTOFF	consensus_score=141.6	fisher_strand_p_value=2.33782e-06	frequency=2.206e-01	ks_quality_p_value=1	major_base=C	major_cov=35/18	major_frequency=7.794e-01	minor_base=T	minor_cov=0/15	new_cov=0/15	polymorphism_frequency=2.206e-01	polymorphism_score=10.1	prediction=polymorphism	ref_cov=35/18	total_cov=35/33
RA	825	.	NC_000913	1902613	0	C	A	bias_e_value=0.142788	bias_p_value=3.07623e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=177.7	fisher_strand_p_value=1.44029e-09	frequency=2.558e-01	ks_quality_p_value=1	major_base=C	major_cov=19/45	major_frequency=7.442e-01	minor_base=A	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.558e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=19/45	total_cov=41/45
RA	826	.	NC_000913	1922815	0	C	A	bias_e_value=25935.6	bias_p_value=0.00558759	consensus_reject=FREQUENCY_CUTOFF	consensus_score=214.3	fisher_strand_p_value=0.000672884	frequency=2.523e-01	ks_quality_p_value=1	major_base=C	major_cov=25/58	major_frequency=7.477e-01	minor_base=A	minor_cov=19/9	new_cov=19/9	polymorphism_frequency=2.523e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=25/58	total_cov=44/67
RA	827	.	NC_000913	1978083	1	.	A	bias_e_value=3919810	bias_p_value=0.844486	consensus_score=385.8	fisher_strand_p_value=0.497001	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=55/59	major_frequency=9.828e-01	minor_base=.	minor_cov=0/2	new_cov=55/59	polymorphism_frequency=9.828e-01	polymorphism_score=0.5	prediction=consensus	ref_cov=0/2	total_cov=55/61
RA	828	.	NC_000913	1987499	0	C	A	consensus_score=237.9	frequency=1	major_base=A	major_cov=36/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/35
RA	829	.	NC_000913	2027332	0	T	A	bias_e_value=4641650	bias_p_value=1	consensus_score=256.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=51/30	major_frequency=9.878e-01	minor_base=C	minor_cov=1/0	new_cov=51/30	polymorphism_frequency=9.878e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=52/30
RA	830	.	NC_000913	2040433	0	C	A	consensus_score=268.5	frequency=1	major_base=A	major_cov=39/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/39
RA	831	.	NC_000913	2041278	0	G	A	bias_e_value=3915170	bias_p_value=0.843487	consensus_score=393.3	fisher_strand_p_value=0.495575	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=57/55	major_frequency=9.912e-01	minor_base=G	minor_cov=0/1	new_cov=57/55	polymorphism_frequency=9.912e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=57/56
RA	832	.	NC_000913	2052885	0	G	A	consensus_score=414.7	frequency=1	major_base=A	major_cov=66/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=66/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=66/54
RA	833	.	NC_000913	2099525	0	A	T	consensus_score=423.7	frequency=1	major_base=T	major_cov=59/64	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=59/64	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=59/64
RA	834	.	NC_000913	2111259	0	G	.	bias_e_value=3858360	bias_p_value=0.831248	consensus_score=557.3	fisher_strand_p_value=0.478632	frequency=1	ks_quality_p_value=0.999853	major_base=.	major_cov=55/61	major_frequency=9.915e-01	minor_base=G	minor_cov=1/0	new_cov=55/61	polymorphism_frequency=9.915e-01	polymorphism_score=-3.3	prediction=consensus	ref_cov=1/0	total_cov=56/61
RA	835	.	NC_000913	2125037	0	G	A	consensus_score=209.5	frequency=1	major_base=A	major_cov=31/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/31
RA	836	.	NC_000913	2173363	0	C	.	consensus_score=321.5	frequency=1	major_base=.	major_cov=36/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/33
RA	837	.	NC_000913	2173364	0	C	.	consensus_score=321.5	frequency=1	major_base=.	major_cov=36/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/33
RA	838	.	NC_000913	2188087	0	T	C	consensus_score=456.3	frequency=1	major_base=C	major_cov=69/56	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=69/56	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=69/56
RA	839	.	NC_000913	2239994	0	G	T	bias_e_value=6.01881e-05	bias_p_value=1.2967e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=279.8	fisher_strand_p_value=4.40284e-13	frequency=2.308e-01	ks_quality_p_value=1	major_base=G	major_cov=67/23	major_frequency=7.692e-01	minor_base=T	minor_cov=0/27	new_cov=0/27	polymorphism_frequency=2.308e-01	polymorphism_score=11.4	prediction=polymorphism	ref_cov=67/23	total_cov=67/50
RA	840	.	NC_000913	2288418	0	G	T	bias_e_value=0.00220886	bias_p_value=4.75877e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=246.4	fisher_strand_p_value=1.85074e-11	frequency=2.899e-01	ks_quality_p_value=1	major_base=G	major_cov=54/44	major_frequency=7.101e-01	minor_base=T	minor_cov=0/40	new_cov=0/40	polymorphism_frequency=2.899e-01	polymorphism_score=16.2	prediction=polymorphism	ref_cov=54/44	total_cov=55/84
RA	841	.	NC_000913	2339173	0	G	A	consensus_score=272.4	frequency=1	major_base=A	major_cov=34/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=34/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=34/45
RA	842	.	NC_000913	2384808	0	C	T	consensus_score=322.3	frequency=1	major_base=T	major_cov=53/55	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=53/55	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=53/55
RA	843	.	NC_000913	2410419	0	G	A	consensus_score=283.9	frequency=1	major_base=A	major_cov=49/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=49/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=49/31
RA	844	.	NC_000913	2466633	0	C	A	bias_e_value=6.50489	bias_p_value=1.40142e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=230.5	fisher_strand_p_value=8.08642e-08	frequency=2.672e-01	ks_quality_p_value=1	major_base=C	major_cov=38/47	major_frequency=7.328e-01	minor_base=A	minor_cov=30/1	new_cov=30/1	polymorphism_frequency=2.672e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=38/47	total_cov=68/48
RA	845	.	NC_000913	2481400	0	T	A	consensus_score=391.3	frequency=1	major_base=A	major_cov=63/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=63/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=63/48
RA	846	.	NC_000913	2484827	0	C	T	consensus_score=455.0	frequency=1	major_base=T	major_cov=70/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=70/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=70/54
RA	847	.	NC_000913	2490240	0	G	T	bias_e_value=0.933073	bias_p_value=2.01022e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=213.3	fisher_strand_p_value=1.03703e-08	frequency=3.071e-01	ks_quality_p_value=1	major_base=G	major_cov=50/38	major_frequency=6.929e-01	minor_base=T	minor_cov=2/37	new_cov=2/37	polymorphism_frequency=3.071e-01	polymorphism_score=14.9	prediction=polymorphism	ref_cov=50/38	total_cov=52/75
RA	848	.	NC_000913	2579943	0	G	A	consensus_score=210.4	frequency=1	major_base=A	major_cov=29/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/31
RA	849	.	NC_000913	2767445	0	C	A	bias_e_value=1.38348e-07	bias_p_value=2.98058e-14	consensus_reject=FREQUENCY_CUTOFF	consensus_score=148.5	fisher_strand_p_value=8.34435e-16	frequency=3.205e-01	ks_quality_p_value=1	major_base=C	major_cov=5/48	major_frequency=6.795e-01	minor_base=A	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=3.205e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=5/48	total_cov=30/48
RA	850	.	NC_000913	2876715	0	G	T	bias_e_value=5.43078	bias_p_value=1.17001e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=170.2	fisher_strand_p_value=6.6774e-08	frequency=2.917e-01	ks_quality_p_value=1	major_base=G	major_cov=37/31	major_frequency=7.083e-01	minor_base=T	minor_cov=0/28	new_cov=0/28	polymorphism_frequency=2.917e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=37/31	total_cov=37/59
RA	851	.	NC_000913	2926292	0	C	T	consensus_score=301.1	frequency=1	major_base=T	major_cov=50/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/33
RA	852	.	NC_000913	2990480	0	C	A	bias_e_value=0.00053257	bias_p_value=1.14737e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=188.7	fisher_strand_p_value=4.21963e-12	frequency=3.471e-01	ks_quality_p_value=1	major_base=C	major_cov=33/46	major_frequency=6.529e-01	minor_base=A	minor_cov=42/0	new_cov=42/0	polymorphism_frequency=3.471e-01	polymorphism_score=20.5	prediction=polymorphism	ref_cov=33/46	total_cov=75/46
RA	853	.	NC_000913	3032307	0	C	T	bias_e_value=0.019919	bias_p_value=4.29136e-09	consensus_reject=FREQUENCY_CUTOFF	consensus_score=190.9	fisher_strand_p_value=1.83233e-10	frequency=2.190e-01	ks_quality_p_value=1	major_base=C	major_cov=24/58	major_frequency=7.810e-01	minor_base=T	minor_cov=23/0	new_cov=23/0	polymorphism_frequency=2.190e-01	polymorphism_score=22.2	prediction=polymorphism	ref_cov=24/58	total_cov=47/58
RA	854	.	NC_000913	3054886	0	G	T	bias_e_value=0.160841	bias_p_value=3.46516e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=147.9	fisher_strand_p_value=1.63193e-09	frequency=2.874e-01	ks_quality_p_value=1	major_base=G	major_cov=21/41	major_frequency=7.126e-01	minor_base=T	minor_cov=25/0	new_cov=25/0	polymorphism_frequency=2.874e-01	polymorphism_score=21.0	prediction=polymorphism	ref_cov=21/41	total_cov=46/41
RA	855	.	NC_000913	3054894	0	G	T	bias_e_value=10.5664	bias_p_value=2.27643e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=122.5	fisher_strand_p_value=1.35379e-07	frequency=2.875e-01	ks_quality_p_value=1	major_base=G	major_cov=18/39	major_frequency=7.125e-01	minor_base=T	minor_cov=22/1	new_cov=22/1	polymorphism_frequency=2.875e-01	polymorphism_score=14.2	prediction=polymorphism	ref_cov=18/39	total_cov=40/40
RA	856	.	NC_000913	3088010	0	C	T	bias_e_value=4641580	bias_p_value=0.999985	consensus_score=383.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994523	major_base=T	major_cov=56/58	major_frequency=9.913e-01	minor_base=G	minor_cov=0/1	new_cov=56/58	polymorphism_frequency=9.913e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/59
RA	857	.	NC_000913	3088011	0	C	T	bias_e_value=3886740	bias_p_value=0.837361	consensus_score=396.8	fisher_strand_p_value=0.486957	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=55/59	major_frequency=9.913e-01	minor_base=C	minor_cov=1/0	new_cov=55/59	polymorphism_frequency=9.913e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=56/59
RA	858	.	NC_000913	3157420	0	C	A	bias_e_value=0.00413053	bias_p_value=8.89884e-10	consensus_reject=FREQUENCY_CUTOFF	consensus_score=194.9	fisher_strand_p_value=3.55084e-11	frequency=2.800e-01	ks_quality_p_value=1	major_base=C	major_cov=22/50	major_frequency=7.200e-01	minor_base=A	minor_cov=28/0	new_cov=28/0	polymorphism_frequency=2.800e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=22/50	total_cov=50/50
RA	859	.	NC_000913	3223646	0	C	T	consensus_score=227.4	frequency=1	major_base=T	major_cov=38/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/26
RA	860	.	NC_000913	3336411	0	G	A	bias_e_value=4155140	bias_p_value=0.895185	consensus_score=340.7	fisher_strand_p_value=0.578614	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=56/42	major_frequency=9.703e-01	minor_base=G	minor_cov=1/2	new_cov=56/42	polymorphism_frequency=9.703e-01	polymorphism_score=-3.4	prediction=consensus	ref_cov=1/2	total_cov=58/44
RA	861	.	NC_000913	3336412	0	A	T	bias_e_value=2202690	bias_p_value=0.474548	consensus_score=337.4	fisher_strand_p_value=0.183654	frequency=1	ks_quality_p_value=0.935874	major_base=T	major_cov=58/42	major_frequency=9.804e-01	minor_base=A	minor_cov=0/2	new_cov=58/42	polymorphism_frequency=9.804e-01	polymorphism_score=-0.2	prediction=consensus	ref_cov=0/2	total_cov=58/44
RA	862	.	NC_000913	3388041	0	T	G	consensus_score=311.7	frequency=1	major_base=G	major_cov=39/46	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/46	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/46
RA	863	.	NC_000913	3474425	0	T	C	consensus_score=239.7	frequency=1	major_base=C	major_cov=41/28	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/28	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/28
RA	864	.	NC_000913	3486175	0	G	A	consensus_score=245.2	frequency=1	major_base=A	major_cov=41/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=41/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=41/36
RA	865	.	NC_000913	3486502	0	C	T	consensus_score=315.1	frequency=1	major_base=T	major_cov=39/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=39/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=39/54
RA	866	.	NC_000913	3560455	1	.	G	consensus_score=249.4	frequency=1	major_base=G	major_cov=38/33	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=38/33	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=38/33
RA	867	.	NC_000913	3629921	0	C	T	consensus_score=219.5	frequency=1	major_base=T	major_cov=25/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=25/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/42
RA	868	.	NC_000913	3682515	0	C	T	consensus_score=306.6	frequency=1	major_base=T	major_cov=50/41	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=50/41	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=50/41
RA	869	.	NC_000913	3707947	0	C	A	consensus_score=391.6	frequency=1	major_base=A	major_cov=81/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=81/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=81/36
RA	870	.	NC_000913	3725176	0	T	G	consensus_score=280.2	frequency=1	major_base=G	major_cov=35/45	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/45	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/45
RA	871	.	NC_000913	3761230	0	G	A	consensus_score=236.3	frequency=1	major_base=A	major_cov=36/31	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/31	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/31
RA	872	.	NC_000913	3771979	0	G	T	bias_e_value=3930010	bias_p_value=0.846684	consensus_score=474.0	fisher_strand_p_value=0.500159	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=63/73	major_frequency=9.855e-01	minor_base=G	minor_cov=0/2	new_cov=63/73	polymorphism_frequency=9.855e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=0/2	total_cov=63/75
RA	873	.	NC_000913	3789274	0	C	A	bias_e_value=6.44668	bias_p_value=1.38888e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=247.4	fisher_strand_p_value=8.00965e-08	frequency=2.417e-01	ks_quality_p_value=1	major_base=C	major_cov=45/46	major_frequency=7.583e-01	minor_base=A	minor_cov=29/0	new_cov=29/0	polymorphism_frequency=2.417e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=45/46	total_cov=74/46
RA	874	.	NC_000913	3815883	1	.	C	bias_e_value=4249410	bias_p_value=0.915495	consensus_score=397.2	fisher_strand_p_value=0.61815	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=53/55	major_frequency=9.730e-01	minor_base=.	minor_cov=2/1	new_cov=53/55	polymorphism_frequency=9.730e-01	polymorphism_score=2.5	prediction=consensus	ref_cov=2/1	total_cov=56/56
RA	875	.	NC_000913	3823162	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=253.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=25/51	major_frequency=9.870e-01	minor_base=G	minor_cov=0/1	new_cov=25/51	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=25/52
RA	876	.	NC_000913	3869637	0	C	A	consensus_score=288.2	frequency=1	major_base=A	major_cov=35/48	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/48	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/48
RA	877	.	NC_000913	3878536	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=195.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=27/32	major_frequency=9.833e-01	minor_base=G	minor_cov=0/1	new_cov=27/32	polymorphism_frequency=9.833e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=27/33
RA	878	.	NC_000913	3906764	0	G	A	bias_e_value=3694570	bias_p_value=0.795959	consensus_score=474.5	fisher_strand_p_value=0.433824	frequency=1	ks_quality_p_value=0.999564	major_base=A	major_cov=58/77	major_frequency=9.926e-01	minor_base=C	minor_cov=1/0	new_cov=58/77	polymorphism_frequency=9.926e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=59/77
RA	879	.	NC_000913	3911533	0	C	A	bias_e_value=5.83759e-06	bias_p_value=1.25765e-12	consensus_reject=FREQUENCY_CUTOFF	consensus_score=199.1	fisher_strand_p_value=3.94704e-14	frequency=3.435e-01	ks_quality_p_value=1	major_base=C	major_cov=33/53	major_frequency=6.565e-01	minor_base=A	minor_cov=45/0	new_cov=45/0	polymorphism_frequency=3.435e-01	polymorphism_score=20.4	prediction=polymorphism	ref_cov=33/53	total_cov=78/53
RA	880	.	NC_000913	3925200	0	T	C	consensus_score=289.8	frequency=1	major_base=C	major_cov=36/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=36/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=36/44
RA	881	.	NC_000913	3926991	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=441.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=91/47	major_frequency=9.928e-01	minor_base=C	minor_cov=1/0	new_cov=91/47	polymorphism_frequency=9.928e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=92/47
RA	882	.	NC_000913	3966530	0	C	T	consensus_score=354.0	frequency=1	major_base=T	major_cov=58/42	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=58/42	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/42
RA	883	.	NC_000913	3966531	0	C	T	bias_e_value=3640680	bias_p_value=0.78435	consensus_score=339.7	fisher_strand_p_value=0.42	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=58/41	major_frequency=9.900e-01	minor_base=G	minor_cov=0/1	new_cov=58/41	polymorphism_frequency=9.900e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=58/42
RA	884	.	NC_000913	4003502	0	G	T	bias_e_value=2597710	bias_p_value=0.559652	consensus_score=295.7	fisher_strand_p_value=0.22435	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=39/45	major_frequency=9.767e-01	minor_base=C	minor_cov=2/0	new_cov=39/45	polymorphism_frequency=9.767e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=41/46
RA	885	.	NC_000913	4015220	0	A	C	consensus_score=267.3	frequency=1	major_base=C	major_cov=29/47	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/47	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/47
RA	886	.	NC_000913	4015225	0	G	T	consensus_score=243.7	frequency=1	major_base=T	major_cov=29/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/44
RA	887	.	NC_000913	4084903	0	T	G	bias_e_value=4641500	bias_p_value=0.999967	consensus_score=211.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.991841	major_base=G	major_cov=25/37	major_frequency=9.841e-01	minor_base=T	minor_cov=0/1	new_cov=25/37	polymorphism_frequency=9.841e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=25/38
RA	888	.	NC_000913	4092703	0	A	G	consensus_score=277.9	frequency=1	major_base=G	major_cov=35/44	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/44	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/44
RA	889	.	NC_000913	4113851	0	G	A	consensus_score=346.4	frequency=1	major_base=A	major_cov=56/40	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=56/40	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/40
RA	890	.	NC_000913	4143377	0	C	T	bias_e_value=4641010	bias_p_value=0.999861	consensus_score=234.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.983357	major_base=T	major_cov=41/24	major_frequency=9.848e-01	minor_base=C	minor_cov=1/0	new_cov=41/24	polymorphism_frequency=9.848e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=1/0	total_cov=42/24
RA	891	.	NC_000913	4161248	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=245.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=35/40	major_frequency=9.868e-01	minor_base=G	minor_cov=0/1	new_cov=35/40	polymorphism_frequency=9.868e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=35/41
RA	892	.	NC_000913	4164123	0	C	G	bias_e_value=3993300	bias_p_value=0.860318	consensus_score=284.4	fisher_strand_p_value=0.520423	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=32/49	major_frequency=9.759e-01	minor_base=T	minor_cov=0/2	new_cov=32/49	polymorphism_frequency=9.759e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/51
RA	893	.	NC_000913	4215347	0	T	A	bias_e_value=3881890	bias_p_value=0.836316	consensus_score=456.5	fisher_strand_p_value=0.485507	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=66/71	major_frequency=9.928e-01	minor_base=C	minor_cov=1/0	new_cov=66/71	polymorphism_frequency=9.928e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=67/72
RA	894	.	NC_000913	4223638	0	T	C	consensus_score=345.2	frequency=1	major_base=C	major_cov=46/53	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=46/53	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=46/53
RA	895	.	NC_000913	4282332	1	.	A	bias_e_value=4641600	bias_p_value=0.999989	consensus_score=422.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.995213	major_base=A	major_cov=66/56	major_frequency=9.919e-01	minor_base=.	minor_cov=1/0	new_cov=66/56	polymorphism_frequency=9.919e-01	polymorphism_score=-2.8	prediction=consensus	ref_cov=1/0	total_cov=67/56
RA	896	.	NC_000913	4293781	0	G	A	bias_e_value=4641640	bias_p_value=0.999997	consensus_score=279.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.997359	major_base=A	major_cov=28/54	major_frequency=9.880e-01	minor_base=G	minor_cov=0/1	new_cov=28/54	polymorphism_frequency=9.880e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=0/1	total_cov=28/55
RA	897	.	NC_000913	4293782	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=277.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=28/54	major_frequency=9.880e-01	minor_base=G	minor_cov=0/1	new_cov=28/54	polymorphism_frequency=9.880e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/55
RA	898	.	NC_000913	4296380	1	.	C	bias_e_value=1678560	bias_p_value=0.361631	consensus_score=198.9	fisher_strand_p_value=0.122158	frequency=1	ks_quality_p_value=0.933497	major_base=C	major_cov=40/20	major_frequency=9.677e-01	minor_base=T	minor_cov=0/2	new_cov=40/20	polymorphism_frequency=9.677e-01	polymorphism_score=-1.6	prediction=consensus	ref_cov=1/0	total_cov=41/22
RA	899	.	NC_000913	4296380	2	.	G	bias_e_value=4625240	bias_p_value=0.996465	consensus_score=204.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.917105	major_base=G	major_cov=40/22	major_frequency=9.841e-01	minor_base=.	minor_cov=1/0	new_cov=40/22	polymorphism_frequency=9.841e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=1/0	total_cov=41/22
RA	900	.	NC_000913	4325644	0	C	T	consensus_score=244.8	frequency=1	major_base=T	major_cov=22/54	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/54	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/54
RA	901	.	NC_000913	4392997	0	G	A	consensus_score=433.6	frequency=1	major_base=A	major_cov=43/77	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=43/77	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=43/77
RA	902	.	NC_000913	4393552	0	G	A	consensus_score=262.4	frequency=1	major_base=A	major_cov=44/36	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=44/36	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=44/36
RA	903	.	NC_000913	4396373	0	C	T	bias_e_value=2821940	bias_p_value=0.60796	consensus_score=222.7	fisher_strand_p_value=0.258312	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=29/37	major_frequency=9.565e-01	minor_base=G	minor_cov=0/3	new_cov=29/37	polymorphism_frequency=9.565e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=0/0	total_cov=29/40
RA	904	.	NC_000913	4396772	0	T	C	bias_e_value=3438200	bias_p_value=0.740727	consensus_score=206.8	fisher_strand_p_value=0.372881	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=37/21	major_frequency=9.831e-01	minor_base=T	minor_cov=0/1	new_cov=37/21	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=37/22
RA	905	.	NC_000913	4473900	0	C	T	consensus_score=319.6	frequency=1	major_base=T	major_cov=54/39	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=54/39	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=54/39
RA	906	.	NC_000913	4475493	0	T	C	bias_e_value=4641580	bias_p_value=0.999985	consensus_score=540.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994582	major_base=C	major_cov=73/80	major_frequency=9.935e-01	minor_base=A	minor_cov=0/1	new_cov=73/80	polymorphism_frequency=9.935e-01	polymorphism_score=-5.1	prediction=consensus	ref_cov=0/0	total_cov=73/81
RA	907	.	NC_000913	4508810	0	C	T	bias_e_value=3925060	bias_p_value=0.845617	consensus_score=393.5	fisher_strand_p_value=0.498623	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=56/63	major_frequency=9.835e-01	minor_base=G	minor_cov=0/2	new_cov=56/63	polymorphism_frequency=9.835e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=56/65
RA	908	.	NC_000913	4510238	0	T	G	bias_e_value=510867	bias_p_value=0.110061	consensus_score=494.5	fisher_strand_p_value=0.0230794	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=90/55	major_frequency=9.732e-01	minor_base=T	minor_cov=0/4	new_cov=90/55	polymorphism_frequency=9.732e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/4	total_cov=90/59
RA	909	.	NC_000913	4540411	0	C	A	bias_e_value=0.000359427	bias_p_value=7.74351e-11	consensus_reject=FREQUENCY_CUTOFF	consensus_score=218.5	fisher_strand_p_value=2.80568e-12	frequency=3.406e-01	ks_quality_p_value=1	major_base=C	major_cov=42/49	major_frequency=6.594e-01	minor_base=A	minor_cov=47/0	new_cov=47/0	polymorphism_frequency=3.406e-01	polymorphism_score=12.1	prediction=polymorphism	ref_cov=42/49	total_cov=89/49
RA	910	.	NC_000913	4556486	0	C	T	bias_e_value=3656070	bias_p_value=0.787665	consensus_score=526.2	fisher_strand_p_value=0.423841	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=87/63	major_frequency=9.934e-01	minor_base=C	minor_cov=0/1	new_cov=87/63	polymorphism_frequency=9.934e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=87/64
RA	911	.	NC_000913	4561368	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=327.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=45/46	major_frequency=9.891e-01	minor_base=C	minor_cov=1/0	new_cov=45/46	polymorphism_frequency=9.891e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=46/46
RA	912	.	NC_000913	4563778	0	G	.	bias_e_value=3934580	bias_p_value=0.847668	consensus_score=365.2	fisher_strand_p_value=0.501582	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=43/35	major_frequency=9.750e-01	minor_base=G	minor_cov=2/0	new_cov=43/35	polymorphism_frequency=9.750e-01	polymorphism_score=0.4	prediction=consensus	ref_cov=2/0	total_cov=45/35
MC	913	.	NC_000913	257908	258683	768	0	left_inside_cov=1	left_outside_cov=130	right_inside_cov=1	right_outside_cov=130
MC	914	.	NC_000913	275509	315228	0	0	left_inside_cov=0	left_outside_cov=85	right_inside_cov=0	right_outside_cov=86
MC	915	.	NC_000913	315433	372748	1050	0	left_inside_cov=26	left_outside_cov=27	right_inside_cov=2	right_outside_cov=87
MC	916	.	NC_000913	1016978	1030308	0	0	left_inside_cov=0	left_outside_cov=124	right_inside_cov=0	right_outside_cov=125
MC	917	.	NC_000913	1196324	1211426	0	0	left_inside_cov=26	left_outside_cov=27	right_inside_cov=26	right_outside_cov=28
MC	918	.	NC_000913	1978495	1979270	0	0	left_inside_cov=0	left_outside_cov=87	right_inside_cov=0	right_outside_cov=113
MC	919	.	NC_000913	2262279	2268956	0	0	left_inside_cov=0	left_outside_cov=71	right_inside_cov=0	right_outside_cov=71
MC	920	.	NC_000913	3423824	3424457	633	0	left_inside_cov=26	left_outside_cov=27	right_inside_cov=26	right_outside_cov=29
MC	921	.	NC_000913	3708467	3708634	0	0	left_inside_cov=0	left_outside_cov=43	right_inside_cov=24	right_outside_cov=67
MC	922	.	NC_000913	4541024	4542041	0	0	left_inside_cov=0	left_outside_cov=103	right_inside_cov=0	right_outside_cov=105
JC	923	.	NC_000913	1	1	NC_000913	4641652	-1	0	alignment_overlap=0	coverage_minus=63	coverage_plus=49	flanking_left=300	flanking_right=300	frequency=1	ignore=CIRCULAR_CHROMOSOME	junction_possible_overlap_registers=294	key=NC_000913__1__1__NC_000913__4641652__-1__0____300__300__0__0	max_left=295	max_left_minus=295	max_left_plus=291	max_min_left=149	max_min_left_minus=149	max_min_left_plus=148	max_min_right=144	max_min_right_minus=115	max_min_right_plus=144	max_pos_hash_score=588	max_right=289	max_right_minus=278	max_right_plus=289	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.29	new_junction_read_count=114	polymorphism_frequency=1.000e+00	pos_hash_score=68	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=112
JC	924	.	NC_000913	257907	-1	NC_000913	258684	1	0	alignment_overlap=8	coverage_minus=46	coverage_plus=82	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=286	key=NC_000913__257907__-1__NC_000913__258676__1__8____300__300__0__0	max_left=288	max_left_minus=288	max_left_plus=287	max_min_left=143	max_min_left_minus=86	max_min_left_plus=143	max_min_right=145	max_min_right_minus=145	max_min_right_plus=144	max_pos_hash_score=572	max_right=289	max_right_minus=289	max_right_plus=284	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.50	new_junction_read_count=129	polymorphism_frequency=9.962e-01	pos_hash_score=71	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.01	side_1_overlap=8	side_1_possible_overlap_registers=294	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=286	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=128
JC	925	.	NC_000913	275508	-1	NC_000913	372749	1	0	alignment_overlap=10	coverage_minus=38	coverage_plus=45	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=284	key=NC_000913__275508__-1__NC_000913__372739__1__10____300__300__0__0	max_left=277	max_left_minus=277	max_left_plus=272	max_min_left=144	max_min_left_minus=139	max_min_left_plus=144	max_min_right=142	max_min_right_minus=142	max_min_right_plus=131	max_pos_hash_score=568	max_right=288	max_right_minus=277	max_right_plus=288	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.99	new_junction_read_count=85	polymorphism_frequency=1.000e+00	pos_hash_score=54	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=10	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=284	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=83
JC	926	.	NC_000913	315229	1	NC_000913	3429986	1	-1	alignment_overlap=-1	coverage_minus=44	coverage_plus=39	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__315229__1__NC_000913__3429986__1__-1__T__300__300__0__0	max_left=292	max_left_minus=267	max_left_plus=292	max_min_left=147	max_min_left_minus=147	max_min_left_plus=140	max_min_right=149	max_min_right_minus=149	max_min_right_plus=144	max_pos_hash_score=586	max_right=283	max_right_minus=283	max_right_plus=276	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.98	new_junction_read_count=86	polymorphism_frequency=1.000e+00	pos_hash_score=59	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=83	unique_read_sequence=T
JC	927	.	NC_000913	609350	-1	NC_000913	1303314	1	0	alignment_overlap=3	coverage_minus=38	coverage_plus=50	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=291	key=NC_000913__609350__-1__NC_000913__1303311__1__3____300__300__1__0	max_left=296	max_left_minus=296	max_left_plus=296	max_min_left=146	max_min_left_minus=143	max_min_left_plus=146	max_min_right=144	max_min_right_minus=133	max_min_right_plus=144	max_pos_hash_score=582	max_right=294	max_right_minus=290	max_right_plus=294	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.03	new_junction_read_count=90	polymorphism_frequency=9.888e-01	pos_hash_score=57	prediction=consensus	read_count_offset=6	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=3	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.01	side_2_overlap=0	side_2_possible_overlap_registers=285	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=88
JC	928	.	NC_000913	696441	-1	NC_000913	696768	1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=6.510e-02	junction_possible_overlap_registers=282	key=NC_000913__696441__-1__NC_000913__696756__1__12____300__300__0__0	max_left=277	max_left_minus=277	max_left_plus=234	max_min_left=73	max_min_left_minus=73	max_min_left_plus=69	max_min_right=54	max_min_right_minus=5	max_min_right_plus=54	max_pos_hash_score=564	max_right=219	max_right_minus=215	max_right_plus=219	neg_log10_pos_hash_p_value=6.8	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=6.510e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.94	side_1_overlap=12	side_1_possible_overlap_registers=294	side_1_read_count=83	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.75	side_2_overlap=0	side_2_possible_overlap_registers=282	side_2_read_count=64	side_2_redundant=0	total_non_overlap_reads=5
JC	929	.	NC_000913	780629	-1	NC_000913	780919	1	0	alignment_overlap=76	coverage_minus=4	coverage_plus=7	flanking_left=300	flanking_right=300	frequency=1.383e-01	junction_possible_overlap_registers=218	key=NC_000913__780629__-1__NC_000913__780843__1__76____300__300__0__0	max_left=172	max_left_minus=172	max_left_plus=172	max_min_left=100	max_min_left_minus=54	max_min_left_plus=100	max_min_right=106	max_min_right_minus=106	max_min_right_plus=67	max_pos_hash_score=436	max_right=187	max_right_minus=170	max_right_plus=187	neg_log10_pos_hash_p_value=3.5	new_junction_coverage=0.17	new_junction_read_count=11	polymorphism_frequency=1.383e-01	pos_hash_score=11	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=76	side_1_possible_overlap_registers=294	side_1_read_count=85	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.13	side_2_overlap=0	side_2_possible_overlap_registers=218	side_2_read_count=74	side_2_redundant=0	total_non_overlap_reads=11
JC	930	.	NC_000913	780631	-1	NC_000913	781811	1	0	alignment_overlap=20	coverage_minus=1	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=7.633e-02	junction_possible_overlap_registers=274	key=NC_000913__780631__-1__NC_000913__781791__1__20____300__300__0__0	max_left=57	max_left_minus=56	max_left_plus=57	max_min_left=57	max_min_left_minus=56	max_min_left_plus=57	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=548	max_right=263	max_right_minus=224	max_right_plus=263	neg_log10_pos_hash_p_value=6.7	new_junction_coverage=0.07	new_junction_read_count=6	polymorphism_frequency=7.633e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.96	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=85	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=5
JC	931	.	NC_000913	780674	-1	NC_000913	781268	1	0	alignment_overlap=18	coverage_minus=1	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=3.597e-02	junction_possible_overlap_registers=276	key=NC_000913__780674__-1__NC_000913__781250__1__18____300__300__0__0	max_left=50	max_left_minus=50	max_left_plus=50	max_min_left=50	max_min_left_minus=50	max_min_left_plus=50	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=552	max_right=123	max_right_minus=123	max_right_plus=123	neg_log10_pos_hash_p_value=7.8	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=3.597e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.14	side_1_overlap=18	side_1_possible_overlap_registers=294	side_1_read_count=101	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.79	side_2_overlap=0	side_2_possible_overlap_registers=276	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=3
JC	932	.	NC_000913	781369	1	NC_000913	2521006	-1	-3	alignment_overlap=-3	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=5.458e-02	junction_possible_overlap_registers=291	key=NC_000913__781369__1__NC_000913__2521006__-1__-3__GAG__300__300__0__0	max_left=108	max_left_minus=108	max_left_plus=108	max_min_left=48	max_min_left_minus=27	max_min_left_plus=48	max_min_right=62	max_min_right_minus=62	max_min_right_plus=62	max_pos_hash_score=582	max_right=269	max_right_minus=269	max_right_plus=247	neg_log10_pos_hash_p_value=7.5	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=5.458e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.64	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.94	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=83	side_2_redundant=0	total_non_overlap_reads=4	unique_read_sequence=GAG
JC	933	.	NC_000913	781369	1	NC_000913	2521006	-1	-2	alignment_overlap=-2	coverage_minus=9	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1.676e-01	junction_possible_overlap_registers=292	key=NC_000913__781369__1__NC_000913__2521006__-1__-2__GG__300__300__0__0	max_left=197	max_left_minus=197	max_left_plus=197	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=76	max_min_right_minus=76	max_min_right_plus=50	max_pos_hash_score=584	max_right=76	max_right_minus=76	max_right_plus=50	neg_log10_pos_hash_p_value=5.1	new_junction_coverage=0.16	new_junction_read_count=14	polymorphism_frequency=1.676e-01	pos_hash_score=10	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.64	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.94	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=83	side_2_redundant=0	total_non_overlap_reads=13	unique_read_sequence=GG
JC	934	.	NC_000913	781369	1	NC_000913	2521127	-1	-1	alignment_overlap=-1	coverage_minus=9	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1.835e-01	junction_possible_overlap_registers=293	key=NC_000913__781369__1__NC_000913__2521127__-1__-1__G__300__300__0__0	max_left=197	max_left_minus=197	max_left_plus=197	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=77	max_min_right_minus=77	max_min_right_plus=51	max_pos_hash_score=586	max_right=77	max_right_minus=77	max_right_plus=51	neg_log10_pos_hash_p_value=5.1	new_junction_coverage=0.16	new_junction_read_count=14	polymorphism_frequency=1.835e-01	pos_hash_score=10	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.64	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=57	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.77	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=68	side_2_redundant=0	total_non_overlap_reads=13	unique_read_sequence=G
JC	935	.	NC_000913	781446	-1	NC_000913	781811	1	0	alignment_overlap=20	coverage_minus=1	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=8.035e-02	junction_possible_overlap_registers=274	key=NC_000913__781446__-1__NC_000913__781791__1__20____300__300__0__0	max_left=57	max_left_minus=56	max_left_plus=57	max_min_left=57	max_min_left_minus=56	max_min_left_plus=57	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=548	max_right=263	max_right_minus=224	max_right_plus=263	neg_log10_pos_hash_p_value=6.7	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=8.035e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.59	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=52	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.80	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=66	side_2_redundant=0	total_non_overlap_reads=5
JC	936	.	NC_000913	781763	1	NC_000913	2521328	-1	-52	alignment_overlap=-52	coverage_minus=1	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=4.883e-02	junction_possible_overlap_registers=242	key=NC_000913__781763__1__NC_000913__2521328__-1__-52__TGCTGGCGCAACGTTATCCTTCACGCTTAACATCTGAGTTTGATGTTAAAAC__300__300__0__0	max_left=153	max_left_minus=153	max_left_plus=153	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=88	max_min_right_minus=88	max_min_right_plus=88	max_pos_hash_score=484	max_right=88	max_right_minus=88	max_right_plus=88	neg_log10_pos_hash_p_value=7.2	new_junction_coverage=0.04	new_junction_read_count=3	polymorphism_frequency=4.883e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.82	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=73	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.78	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=69	side_2_redundant=0	total_non_overlap_reads=3	unique_read_sequence=TGCTGGCGCAACGTTATCCTTCACGCTTAACATCTGAGTTTGATGTTAAAAC
JC	937	.	NC_000913	1016977	-1	NC_000913	1030309	1	0	alignment_overlap=2	coverage_minus=64	coverage_plus=57	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=292	key=NC_000913__1016977__-1__NC_000913__1030307__1__2____300__300__0__0	max_left=297	max_left_minus=294	max_left_plus=297	max_min_left=134	max_min_left_minus=114	max_min_left_plus=134	max_min_right=137	max_min_right_minus=137	max_min_right_plus=126	max_pos_hash_score=584	max_right=296	max_right_minus=296	max_right_plus=296	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.41	new_junction_read_count=124	polymorphism_frequency=1.000e+00	pos_hash_score=78	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=2	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=292	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=121
JC	938	.	NC_000913	1094245	1	NC_000913	3429990	-1	0	alignment_overlap=1	coverage_minus=53	coverage_plus=54	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__1094245__1__NC_000913__3429991__-1__1____300__300__1__0	max_left=296	max_left_minus=241	max_left_plus=296	max_min_left=148	max_min_left_minus=146	max_min_left_plus=148	max_min_right=148	max_min_right_minus=148	max_min_right_plus=120	max_pos_hash_score=586	max_right=295	max_right_minus=295	max_right_plus=288	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.22	new_junction_read_count=108	polymorphism_frequency=1.000e+00	pos_hash_score=60	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=1	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=288	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=107
JC	939	.	NC_000913	1166125	-1	NC_000913	1166621	1	0	alignment_overlap=15	coverage_minus=5	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=9.384e-02	junction_possible_overlap_registers=279	key=NC_000913__1166125__-1__NC_000913__1166606__1__15____300__300__0__0	max_left=158	max_left_minus=158	max_left_plus=158	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=55	max_min_right_minus=55	max_min_right_plus=55	max_pos_hash_score=558	max_right=55	max_right_minus=55	max_right_plus=55	neg_log10_pos_hash_p_value=5.9	new_junction_coverage=0.10	new_junction_read_count=8	polymorphism_frequency=9.384e-02	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.99	side_1_overlap=15	side_1_possible_overlap_registers=294	side_1_read_count=88	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.85	side_2_overlap=0	side_2_possible_overlap_registers=279	side_2_read_count=71	side_2_redundant=0	total_non_overlap_reads=8
JC	940	.	NC_000913	1227665	-1	NC_000913	1228049	1	0	alignment_overlap=11	coverage_minus=2	coverage_plus=3	flanking_left=300	flanking_right=300	frequency=4.514e-02	junction_possible_overlap_registers=283	key=NC_000913__1227665__-1__NC_000913__1228038__1__11____300__300__0__0	max_left=175	max_left_minus=175	max_left_plus=117	max_min_left=117	max_min_left_minus=117	max_min_left_plus=117	max_min_right=74	max_min_right_minus=74	max_min_right_plus=0	max_pos_hash_score=566	max_right=147	max_right_minus=147	max_right_plus=147	neg_log10_pos_hash_p_value=6.9	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=4.514e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.36	side_1_overlap=11	side_1_possible_overlap_registers=294	side_1_read_count=120	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.13	side_2_overlap=0	side_2_possible_overlap_registers=283	side_2_read_count=96	side_2_redundant=0	total_non_overlap_reads=5
JC	941	.	NC_000913	1286906	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=3	coverage_plus=5	flanking_left=300	flanking_right=300	frequency=1.463e-01	junction_possible_overlap_registers=274	key=NC_000913__1286906__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=270	max_left_minus=270	max_left_plus=240	max_min_left=132	max_min_left_minus=0	max_min_left_plus=132	max_min_right=76	max_min_right_minus=76	max_min_right_plus=76	max_pos_hash_score=548	max_right=202	max_right_minus=76	max_right_plus=202	neg_log10_pos_hash_p_value=5.5	new_junction_coverage=0.10	new_junction_read_count=8	polymorphism_frequency=1.463e-01	pos_hash_score=8	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.60	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=53	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.53	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=44	side_2_redundant=0	total_non_overlap_reads=8
JC	942	.	NC_000913	1287084	-1	NC_000913	1287557	1	0	alignment_overlap=20	coverage_minus=3	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=1.375e-01	junction_possible_overlap_registers=274	key=NC_000913__1287084__-1__NC_000913__1287537__1__20____300__300__0__0	max_left=153	max_left_minus=153	max_left_plus=132	max_min_left=132	max_min_left_minus=109	max_min_left_plus=132	max_min_right=125	max_min_right_minus=125	max_min_right_plus=0	max_pos_hash_score=548	max_right=239	max_right_minus=233	max_right_plus=239	neg_log10_pos_hash_p_value=5.8	new_junction_coverage=0.08	new_junction_read_count=7	polymorphism_frequency=1.375e-01	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.53	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=47	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.53	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=44	side_2_redundant=0	total_non_overlap_reads=7
JC	943	.	NC_000913	1287262	-1	NC_000913	1287382	1	0	alignment_overlap=21	coverage_minus=3	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=9.709e-02	junction_possible_overlap_registers=273	key=NC_000913__1287262__-1__NC_000913__1287361__1__21____300__300__0__0	max_left=109	max_left_minus=109	max_left_plus=109	max_min_left=58	max_min_left_minus=58	max_min_left_plus=20	max_min_right=104	max_min_right_minus=104	max_min_right_plus=104	max_pos_hash_score=546	max_right=221	max_right_minus=221	max_right_plus=217	neg_log10_pos_hash_p_value=6.7	new_junction_coverage=0.06	new_junction_read_count=5	polymorphism_frequency=9.709e-02	pos_hash_score=5	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.63	side_1_overlap=21	side_1_possible_overlap_registers=294	side_1_read_count=56	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.50	side_2_overlap=0	side_2_possible_overlap_registers=273	side_2_read_count=41	side_2_redundant=0	total_non_overlap_reads=5
JC	944	.	NC_000913	1299498	-1	NC_000913	1300698	1	0	alignment_overlap=4	coverage_minus=70	coverage_plus=70	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=290	key=NC_000913__1299498__-1__NC_000913__1300694__1__4____300__300__0__0	max_left=290	max_left_minus=290	max_left_plus=286	max_min_left=146	max_min_left_minus=133	max_min_left_plus=146	max_min_right=142	max_min_right_minus=133	max_min_right_plus=142	max_pos_hash_score=580	max_right=287	max_right_minus=287	max_right_plus=286	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.65	new_junction_read_count=144	polymorphism_frequency=1.000e+00	pos_hash_score=80	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=4	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=290	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=140
JC	945	.	NC_000913	1303319	-1	NC_000913	2514273	1	0	alignment_overlap=4	coverage_minus=29	coverage_plus=49	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=290	key=NC_000913__1303323__-1__NC_000913__2514273__1__4____300__300__0__1	max_left=288	max_left_minus=269	max_left_plus=288	max_min_left=145	max_min_left_minus=132	max_min_left_plus=145	max_min_right=146	max_min_right_minus=146	max_min_right_plus=137	max_pos_hash_score=580	max_right=293	max_right_minus=255	max_right_plus=293	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.89	new_junction_read_count=78	polymorphism_frequency=1.000e+00	pos_hash_score=43	prediction=consensus	read_count_offset=6	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=284	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=4	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=78
JC	946	.	NC_000913	1397238	-1	NC_000913	1978494	-1	0	alignment_overlap=0	coverage_minus=49	coverage_plus=36	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1397238__-1__NC_000913__1978494__-1__0____300__300__1__0	max_left=294	max_left_minus=283	max_left_plus=294	max_min_left=144	max_min_left_minus=144	max_min_left_plus=120	max_min_right=148	max_min_right_minus=148	max_min_right_plus=132	max_pos_hash_score=588	max_right=298	max_right_minus=298	max_right_plus=296	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.98	new_junction_read_count=87	polymorphism_frequency=1.000e+00	pos_hash_score=58	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=85
JC	947	.	NC_000913	1399590	1	NC_000913	2101749	1	0	alignment_overlap=0	coverage_minus=52	coverage_plus=45	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1399590__1__NC_000913__2101749__1__0____300__300__0__1	max_left=298	max_left_minus=297	max_left_plus=298	max_min_left=148	max_min_left_minus=138	max_min_left_plus=148	max_min_right=149	max_min_right_minus=149	max_min_right_plus=132	max_pos_hash_score=588	max_right=291	max_right_minus=284	max_right_plus=291	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.10	new_junction_read_count=97	polymorphism_frequency=1.000e+00	pos_hash_score=66	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=290	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=97
JC	948	.	NC_000913	1399593	-1	NC_000913	2290113	-1	0	alignment_overlap=1	coverage_minus=50	coverage_plus=65	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__1399594__-1__NC_000913__2290113__-1__1____300__300__0__1	max_left=297	max_left_minus=291	max_left_plus=297	max_min_left=149	max_min_left_minus=138	max_min_left_plus=149	max_min_right=143	max_min_right_minus=143	max_min_right_plus=108	max_pos_hash_score=586	max_right=292	max_right_minus=292	max_right_plus=287	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.35	new_junction_read_count=119	polymorphism_frequency=1.000e+00	pos_hash_score=70	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=115
JC	949	.	NC_000913	1907577	1	NC_000913	1979270	-1	0	alignment_overlap=0	coverage_minus=41	coverage_plus=44	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1907577__1__NC_000913__1979270__-1__0____300__300__0__1	max_left=288	max_left_minus=288	max_left_plus=282	max_min_left=147	max_min_left_minus=124	max_min_left_plus=147	max_min_right=149	max_min_right_minus=149	max_min_right_plus=147	max_pos_hash_score=588	max_right=280	max_right_minus=280	max_right_plus=253	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.99	new_junction_read_count=88	polymorphism_frequency=1.000e+00	pos_hash_score=52	prediction=consensus	read_count_offset=8	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=286	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=85
JC	950	.	NC_000913	1907584	-1	NC_000913	1978503	1	0	alignment_overlap=0	coverage_minus=44	coverage_plus=47	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1907584__-1__NC_000913__1978503__1__0____300__300__0__1	max_left=296	max_left_minus=296	max_left_plus=287	max_min_left=142	max_min_left_minus=120	max_min_left_plus=142	max_min_right=149	max_min_right_minus=134	max_min_right_plus=149	max_pos_hash_score=588	max_right=286	max_right_minus=277	max_right_plus=286	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.03	new_junction_read_count=91	polymorphism_frequency=1.000e+00	pos_hash_score=67	prediction=consensus	read_count_offset=8	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=286	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=91
JC	951	.	NC_000913	1979270	-1	NC_000913	4541023	-1	0	alignment_overlap=0	coverage_minus=56	coverage_plus=45	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1979270__-1__NC_000913__4541023__-1__0____300__300__1__0	max_left=295	max_left_minus=284	max_left_plus=295	max_min_left=148	max_min_left_minus=148	max_min_left_plus=125	max_min_right=147	max_min_right_minus=147	max_min_right_plus=145	max_pos_hash_score=588	max_right=298	max_right_minus=298	max_right_plus=279	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.16	new_junction_read_count=103	polymorphism_frequency=1.000e+00	pos_hash_score=65	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=101
JC	952	.	NC_000913	1979271	1	NC_000913	2102947	-1	0	alignment_overlap=0	coverage_minus=47	coverage_plus=62	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__1979271__1__NC_000913__2102947__-1__0____300__300__0__1	max_left=299	max_left_minus=299	max_left_plus=294	max_min_left=145	max_min_left_minus=143	max_min_left_plus=145	max_min_right=144	max_min_right_minus=130	max_min_right_plus=144	max_pos_hash_score=588	max_right=299	max_right_minus=299	max_right_plus=292	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.28	new_junction_read_count=113	polymorphism_frequency=1.000e+00	pos_hash_score=72	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=109
JC	953	.	NC_000913	2262278	-1	NC_000913	2268957	1	0	alignment_overlap=1	coverage_minus=32	coverage_plus=37	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=293	key=NC_000913__2262278__-1__NC_000913__2268956__1__1____300__300__0__0	max_left=298	max_left_minus=288	max_left_plus=298	max_min_left=116	max_min_left_minus=107	max_min_left_plus=116	max_min_right=148	max_min_right_minus=148	max_min_right_plus=148	max_pos_hash_score=586	max_right=297	max_right_minus=276	max_right_plus=297	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.80	new_junction_read_count=71	polymorphism_frequency=1.000e+00	pos_hash_score=46	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=1	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=293	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=69
JC	954	.	NC_000913	2518116	-1	NC_000913	2518232	1	0	alignment_overlap=81	coverage_minus=5	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=1.320e-01	junction_possible_overlap_registers=213	key=NC_000913__2518116__-1__NC_000913__2518151__1__81____300__300__0__0	max_left=199	max_left_minus=199	max_left_plus=139	max_min_left=89	max_min_left_minus=89	max_min_left_plus=1	max_min_right=13	max_min_right_minus=13	max_min_right_plus=13	max_pos_hash_score=426	max_right=210	max_right_minus=210	max_right_plus=169	neg_log10_pos_hash_p_value=4.7	new_junction_coverage=0.11	new_junction_read_count=7	polymorphism_frequency=1.320e-01	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.73	side_1_overlap=81	side_1_possible_overlap_registers=294	side_1_read_count=65	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.70	side_2_overlap=0	side_2_possible_overlap_registers=213	side_2_read_count=45	side_2_redundant=0	total_non_overlap_reads=7
JC	955	.	NC_000913	2817942	-1	NC_000913	2818492	1	0	alignment_overlap=20	coverage_minus=2	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=9.209e-02	junction_possible_overlap_registers=274	key=NC_000913__2817942__-1__NC_000913__2818472__1__20____300__300__0__0	max_left=161	max_left_minus=83	max_left_plus=161	max_min_left=111	max_min_left_minus=83	max_min_left_plus=111	max_min_right=120	max_min_right_minus=0	max_min_right_plus=120	max_pos_hash_score=548	max_right=275	max_right_minus=207	max_right_plus=275	neg_log10_pos_hash_p_value=6.2	new_junction_coverage=0.07	new_junction_read_count=6	polymorphism_frequency=9.209e-02	pos_hash_score=6	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.78	side_1_overlap=20	side_1_possible_overlap_registers=294	side_1_read_count=69	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.65	side_2_overlap=0	side_2_possible_overlap_registers=274	side_2_read_count=54	side_2_redundant=0	total_non_overlap_reads=6
JC	956	.	NC_000913	2877791	-1	NC_000913	2878097	1	0	alignment_overlap=18	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=6.892e-02	junction_possible_overlap_registers=276	key=NC_000913__2877791__-1__NC_000913__2878079__1__18____300__300__0__0	max_left=262	max_left_minus=262	max_left_plus=192	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=86	max_min_right_minus=86	max_min_right_plus=86	max_pos_hash_score=552	max_right=86	max_right_minus=86	max_right_plus=86	neg_log10_pos_hash_p_value=7.8	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=6.892e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.72	side_1_overlap=18	side_1_possible_overlap_registers=294	side_1_read_count=64	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.58	side_2_overlap=0	side_2_possible_overlap_registers=276	side_2_read_count=48	side_2_redundant=0	total_non_overlap_reads=4
JC	957	.	NC_000913	2913392	1	NC_000913	2997691	-1	0	alignment_overlap=0	coverage_minus=36	coverage_plus=51	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2913392__1__NC_000913__2997691__-1__0____300__300__0__1	max_left=295	max_left_minus=277	max_left_plus=295	max_min_left=144	max_min_left_minus=144	max_min_left_plus=141	max_min_right=150	max_min_right_minus=150	max_min_right_plus=143	max_pos_hash_score=588	max_right=296	max_right_minus=296	max_right_plus=292	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.99	new_junction_read_count=88	polymorphism_frequency=1.000e+00	pos_hash_score=48	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=87
JC	958	.	NC_000913	2913396	-1	NC_000913	2996361	1	0	alignment_overlap=0	coverage_minus=33	coverage_plus=40	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2913396__-1__NC_000913__2996361__1__0____300__300__0__1	max_left=298	max_left_minus=298	max_left_plus=277	max_min_left=136	max_min_left_minus=136	max_min_left_plus=132	max_min_right=149	max_min_right_minus=133	max_min_right_plus=149	max_pos_hash_score=588	max_right=297	max_right_minus=297	max_right_plus=271	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.84	new_junction_read_count=74	polymorphism_frequency=1.000e+00	pos_hash_score=49	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=289	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=73
JC	959	.	NC_000913	2996361	1	NC_000913	3546574	1	0	alignment_overlap=0	coverage_minus=47	coverage_plus=34	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__2996361__1__NC_000913__3546574__1__0____300__300__1__0	max_left=292	max_left_minus=276	max_left_plus=292	max_min_left=147	max_min_left_minus=147	max_min_left_plus=133	max_min_right=141	max_min_right_minus=141	max_min_right_plus=141	max_pos_hash_score=588	max_right=292	max_right_minus=264	max_right_plus=292	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.94	new_junction_read_count=83	polymorphism_frequency=1.000e+00	pos_hash_score=57	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=289	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=81
JC	960	.	NC_000913	3186096	1	NC_000913	3546578	-1	0	alignment_overlap=2	coverage_minus=60	coverage_plus=43	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=292	key=NC_000913__3186096__1__NC_000913__3546580__-1__2____300__300__1__0	max_left=295	max_left_minus=295	max_left_plus=295	max_min_left=141	max_min_left_minus=141	max_min_left_plus=135	max_min_right=137	max_min_right_minus=137	max_min_right_plus=123	max_pos_hash_score=584	max_right=295	max_right_minus=295	max_right_plus=294	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.22	new_junction_read_count=107	polymorphism_frequency=1.000e+00	pos_hash_score=64	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=287	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=103
JC	961	.	NC_000913	3469405	-1	NC_000913	3469715	1	0	alignment_overlap=16	coverage_minus=2	coverage_plus=2	flanking_left=300	flanking_right=300	frequency=3.470e-02	junction_possible_overlap_registers=278	key=NC_000913__3469405__-1__NC_000913__3469699__1__16____300__300__0__0	max_left=125	max_left_minus=125	max_left_plus=125	max_min_left=14	max_min_left_minus=14	max_min_left_plus=7	max_min_right=90	max_min_right_minus=90	max_min_right_plus=90	max_pos_hash_score=556	max_right=218	max_right_minus=147	max_right_plus=218	neg_log10_pos_hash_p_value=7.3	new_junction_coverage=0.05	new_junction_read_count=4	polymorphism_frequency=3.470e-02	pos_hash_score=4	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.34	side_1_overlap=16	side_1_possible_overlap_registers=294	side_1_read_count=119	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.31	side_2_overlap=0	side_2_possible_overlap_registers=278	side_2_read_count=110	side_2_redundant=0	total_non_overlap_reads=4
JC	962	.	NC_000913	3584195	-1	NC_000913	4542042	1	0	alignment_overlap=0	coverage_minus=57	coverage_plus=43	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__3584195__-1__NC_000913__4542042__1__0____300__300__1__0	max_left=293	max_left_minus=282	max_left_plus=293	max_min_left=149	max_min_left_minus=149	max_min_left_plus=148	max_min_right=147	max_min_right_minus=138	max_min_right_plus=147	max_pos_hash_score=588	max_right=294	max_right_minus=294	max_right_plus=292	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.19	new_junction_read_count=105	polymorphism_frequency=1.000e+00	pos_hash_score=63	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=100
JC	963	.	NC_000913	3648146	-1	NC_000913	3648378	1	0	alignment_overlap=58	coverage_minus=3	coverage_plus=4	flanking_left=300	flanking_right=300	frequency=7.103e-02	junction_possible_overlap_registers=236	key=NC_000913__3648146__-1__NC_000913__3648320__1__58____300__300__0__0	max_left=212	max_left_minus=212	max_left_plus=143	max_min_left=114	max_min_left_minus=114	max_min_left_plus=84	max_min_right=93	max_min_right_minus=15	max_min_right_plus=93	max_pos_hash_score=472	max_right=157	max_right_minus=128	max_right_plus=157	neg_log10_pos_hash_p_value=5.1	new_junction_coverage=0.10	new_junction_read_count=7	polymorphism_frequency=7.103e-02	pos_hash_score=7	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.20	side_1_overlap=58	side_1_possible_overlap_registers=294	side_1_read_count=106	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.38	side_2_overlap=0	side_2_possible_overlap_registers=236	side_2_read_count=98	side_2_redundant=0	total_non_overlap_reads=7
JC	964	.	NC_000913	3708466	-1	NC_000913	3708635	1	0	alignment_overlap=108	coverage_minus=18	coverage_plus=24	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=186	key=NC_000913__3708466__-1__NC_000913__3708527__1__108____300__300__0__0	max_left=187	max_left_minus=158	max_left_plus=187	max_min_left=95	max_min_left_minus=80	max_min_left_plus=95	max_min_right=91	max_min_right_minus=91	max_min_right_plus=87	max_pos_hash_score=372	max_right=189	max_right_minus=184	max_right_plus=189	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.77	new_junction_read_count=43	polymorphism_frequency=1.000e+00	pos_hash_score=29	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=108	side_1_possible_overlap_registers=294	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=186	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=42
JC	965	.	NC_000913	3822646	1	NC_000913	3822651	-1	0	alignment_overlap=0	coverage_minus=42	coverage_plus=43	flanking_left=300	flanking_right=300	frequency=1	junction_possible_overlap_registers=294	key=NC_000913__3822646__1__NC_000913__3822651__-1__0____300__300__0__0	max_left=296	max_left_minus=287	max_left_plus=296	max_min_left=148	max_min_left_minus=148	max_min_left_plus=130	max_min_right=146	max_min_right_minus=146	max_min_right_plus=124	max_pos_hash_score=588	max_right=299	max_right_minus=299	max_right_plus=296	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.01	new_junction_read_count=89	polymorphism_frequency=9.622e-01	pos_hash_score=60	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.05	side_1_overlap=0	side_1_possible_overlap_registers=294	side_1_read_count=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.03	side_2_overlap=0	side_2_possible_overlap_registers=294	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=85
UN	966	.	NC_000913	15663	16456
UN	967	.	NC_000913	20066	20066
UN	968	.	NC_000913	20079	20281
UN	969	.	NC_000913	20285	20285
UN	970	.	NC_000913	224019	224510
UN	971	.	NC_000913	225164	225164
UN	972	.	NC_000913	225166	225166
UN	973	.	NC_000913	225168	225168
UN	974	.	NC_000913	225171	225171
UN	975	.	NC_000913	225176	225331
UN	976	.	NC_000913	225333	225336
UN	977	.	NC_000913	225339	225339
UN	978	.	NC_000913	225341	225341
UN	979	.	NC_000913	227256	228414
UN	980	.	NC_000913	228416	228416
UN	981	.	NC_000913	228420	228420
UN	982	.	NC_000913	228425	228425
UN	983	.	NC_000913	257908	258683
UN	984	.	NC_000913	270791	271001
UN	985	.	NC_000913	271003	271003
UN	986	.	NC_000913	274238	274238
UN	987	.	NC_000913	274240	274241
UN	988	.	NC_000913	274243	274869
UN	989	.	NC_000913	275509	315228
UN	990	.	NC_000913	315495	372748
UN	991	.	NC_000913	381541	382324
UN	992	.	NC_000913	391973	392697
UN	993	.	NC_000913	526074	526074
UN	994	.	NC_000913	526080	526083
UN	995	.	NC_000913	526086	526087
UN	996	.	NC_000913	526089	526093
UN	997	.	NC_000913	526095	526448
UN	998	.	NC_000913	567034	567034
UN	999	.	NC_000913	567055	567770
UN	1000	.	NC_000913	574848	574850
UN	1001	.	NC_000913	574852	575514
UN	1002	.	NC_000913	608274	608275
UN	1003	.	NC_000913	608277	608277
UN	1004	.	NC_000913	608280	609107
UN	1005	.	NC_000913	609115	609115
UN	1006	.	NC_000913	688119	688119
UN	1007	.	NC_000913	688129	688766
UN	1008	.	NC_000913	1016978	1030308
UN	1009	.	NC_000913	1094519	1095233
UN	1010	.	NC_000913	1095239	1095239
UN	1011	.	NC_000913	1095245	1095245
UN	1012	.	NC_000913	1095247	1095247
UN	1013	.	NC_000913	1196374	1211413
UN	1014	.	NC_000913	1299499	1300697
UN	1015	.	NC_000913	1396324	1396324
UN	1016	.	NC_000913	1396330	1396968
UN	1017	.	NC_000913	1432912	1432916
UN	1018	.	NC_000913	1468188	1468188
UN	1019	.	NC_000913	1468195	1468974
UN	1020	.	NC_000913	1468977	1468977
UN	1021	.	NC_000913	1469550	1470228
UN	1022	.	NC_000913	1470230	1470232
UN	1023	.	NC_000913	1528521	1528521
UN	1024	.	NC_000913	1528558	1528558
UN	1025	.	NC_000913	1528561	1528893
UN	1026	.	NC_000913	1528897	1528897
UN	1027	.	NC_000913	1528899	1528901
UN	1028	.	NC_000913	1651121	1651277
UN	1029	.	NC_000913	1978495	1979270
UN	1030	.	NC_000913	2067002	2067064
UN	1031	.	NC_000913	2069216	2069986
UN	1032	.	NC_000913	2069988	2069991
UN	1033	.	NC_000913	2069993	2069995
UN	1034	.	NC_000913	2069997	2069999
UN	1035	.	NC_000913	2070001	2070002
UN	1036	.	NC_000913	2070005	2070005
UN	1037	.	NC_000913	2101997	2102663
UN	1038	.	NC_000913	2170428	2170428
UN	1039	.	NC_000913	2170449	2171154
UN	1040	.	NC_000913	2171156	2171156
UN	1041	.	NC_000913	2171159	2171160
UN	1042	.	NC_000913	2262279	2268956
UN	1043	.	NC_000913	2289191	2289833
UN	1044	.	NC_000913	2514536	2515341
UN	1045	.	NC_000913	2515345	2515347
UN	1046	.	NC_000913	2515354	2515355
UN	1047	.	NC_000913	2726352	2728979
UN	1048	.	NC_000913	2728983	2728983
UN	1049	.	NC_000913	2729808	2730687
UN	1050	.	NC_000913	2730691	2730691
UN	1051	.	NC_000913	2996616	2997405
UN	1052	.	NC_000913	2997407	2997407
UN	1053	.	NC_000913	2997409	2997409
UN	1054	.	NC_000913	2997411	2997411
UN	1055	.	NC_000913	2997413	2997413
UN	1056	.	NC_000913	2997417	2997417
UN	1057	.	NC_000913	3130426	3131062
UN	1058	.	NC_000913	3186362	3187171
UN	1059	.	NC_000913	3365826	3366470
UN	1060	.	NC_000913	3423933	3424376
UN	1061	.	NC_000913	3424862	3426576
UN	1062	.	NC_000913	3427216	3427218
UN	1063	.	NC_000913	3427222	3428298
UN	1064	.	NC_000913	3428300	3428300
UN	1065	.	NC_000913	3428304	3428304
UN	1066	.	NC_000913	3583695	3583910
UN	1067	.	NC_000913	3619535	3619535
UN	1068	.	NC_000913	3619546	3620857
UN	1069	.	NC_000913	3620864	3620864
UN	1070	.	NC_000913	3620870	3620870
UN	1071	.	NC_000913	3620879	3620879
UN	1072	.	NC_000913	3620890	3620890
UN	1073	.	NC_000913	3621344	3622044
UN	1074	.	NC_000913	3622046	3622046
UN	1075	.	NC_000913	3622049	3622049
UN	1076	.	NC_000913	3622051	3622051
UN	1077	.	NC_000913	3622053	3622053
UN	1078	.	NC_000913	3652289	3652289
UN	1079	.	NC_000913	3652292	3652953
UN	1080	.	NC_000913	3708467	3708549
UN	1081	.	NC_000913	3708551	3708551
UN	1082	.	NC_000913	3708554	3708556
UN	1083	.	NC_000913	3762522	3762523
UN	1084	.	NC_000913	3762525	3763859
UN	1085	.	NC_000913	3763861	3763861
UN	1086	.	NC_000913	3763866	3763866
UN	1087	.	NC_000913	3763868	3763868
UN	1088	.	NC_000913	3763870	3763870
UN	1089	.	NC_000913	3763877	3763877
UN	1090	.	NC_000913	3763881	3763881
UN	1091	.	NC_000913	3764320	3764321
UN	1092	.	NC_000913	3764326	3764327
UN	1093	.	NC_000913	3764329	3764329
UN	1094	.	NC_000913	3764331	3765036
UN	1095	.	NC_000913	3765040	3765044
UN	1096	.	NC_000913	3942264	3942264
UN	1097	.	NC_000913	3942276	3943161
UN	1098	.	NC_000913	3944326	3944328
UN	1099	.	NC_000913	3944331	3945294
UN	1100	.	NC_000913	3945296	3945296
UN	1101	.	NC_000913	4035437	4036835
UN	1102	.	NC_000913	4038112	4038414
UN	1103	.	NC_000913	4038417	4038418
UN	1104	.	NC_000913	4038994	4038994
UN	1105	.	NC_000913	4038998	4039105
UN	1106	.	NC_000913	4039107	4039108
UN	1107	.	NC_000913	4039655	4040329
UN	1108	.	NC_000913	4040332	4040333
UN	1109	.	NC_000913	4040335	4040335
UN	1110	.	NC_000913	4166920	4166920
UN	1111	.	NC_000913	4166923	4167937
UN	1112	.	NC_000913	4168816	4171372
UN	1113	.	NC_000913	4171375	4171375
UN	1114	.	NC_000913	4176829	4176837
UN	1115	.	NC_000913	4208385	4209470
UN	1116	.	NC_000913	4209473	4209474
UN	1117	.	NC_000913	4210297	4210297
UN	1118	.	NC_000913	4210304	4212850
UN	1119	.	NC_000913	4212859	4212859
UN	1120	.	NC_000913	4212863	4212863
UN	1121	.	NC_000913	4498463	4498463
UN	1122	.	NC_000913	4498466	4498466
UN	1123	.	NC_000913	4498470	4499233
UN	1124	.	NC_000913	4499237	4499239
UN	1125	.	NC_000913	4499244	4499245
UN	1126	.	NC_000913	4499251	4499251
UN	1127	.	NC_000913	4507741	4508414
UN	1128	.	NC_000913	4508416	4508416
UN	1129	.	NC_000913	4508422	4508422
UN	1130	.	NC_000913	4508425	4508425
UN	1131	.	NC_000913	4541024	4542041