#=GENOME_DIFF	1.0
#=CREATED	16:51:08 28 Nov 2024
#=PROGRAM	breseq 0.39.0 
#=COMMAND	breseq -j 8 -o /ld1/breseq_work/20231211run9/CV70_S24_L001_R1R2_001 -r /ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff /ld1/raw_sequence_data/20231211run9/CV70_S24_L001_R1_001.fastq.gz /ld1/raw_sequence_data/20231211run9/CV70_S24_L001_R2_001.fastq.gz
#=REFSEQ	/ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff
#=READSEQ	/ld1/raw_sequence_data/20231211run9/CV70_S24_L001_R1_001.fastq.gz
#=READSEQ	/ld1/raw_sequence_data/20231211run9/CV70_S24_L001_R2_001.fastq.gz
#=CONVERTED-BASES	286142354
#=CONVERTED-READS	1163207
#=INPUT-BASES	286154484
#=INPUT-READS	1163326
#=MAPPED-BASES	264162477
#=MAPPED-READS	1079025
DEL	1	376,390	NC_000913	62379	25896
SNP	2	182	NC_000913	89089	A
SNP	3	183	NC_000913	89103	C
SNP	4	184	NC_000913	89143	G
SNP	5	185	NC_000913	89145	T
SNP	6	186	NC_000913	89239	A
SNP	7	187	NC_000913	89241	A
SNP	8	188	NC_000913	89263	G
SNP	9	189	NC_000913	89316	C
SNP	10	190	NC_000913	89321	G
SNP	11	191	NC_000913	89471	G
SNP	12	192	NC_000913	89570	C
SNP	13	193	NC_000913	89699	C
SNP	14	194	NC_000913	89754	C
SNP	15	195	NC_000913	90432	G
SNP	16	196	NC_000913	90435	C
SNP	17	197	NC_000913	91904	A
SNP	18	198	NC_000913	91916	T
SNP	19	199	NC_000913	91922	A
SNP	20	200	NC_000913	91949	T
SNP	21	201	NC_000913	92096	T
SNP	22	202	NC_000913	92162	T
SNP	23	203	NC_000913	92327	T
SNP	24	204	NC_000913	92354	G
SNP	25	205	NC_000913	92687	G
SNP	26	206	NC_000913	92810	C
SNP	27	207	NC_000913	92843	G
SNP	28	208	NC_000913	94278	A
SNP	29	209	NC_000913	134256	T
SNP	30	210	NC_000913	244565	T
SNP	31	211	NC_000913	246747	T
DEL	32	377,391	NC_000913	257908	776
SNP	33	212	NC_000913	284535	G
MOB	34	393,394	NC_000913	288695	IS150	1	3
SNP	35	214	NC_000913	313543	A
SNP	36	215	NC_000913	419294	G
SUB	37	216,217	NC_000913	480295	2	AA
SNP	38	218	NC_000913	553161	A
SNP	39	237	NC_000913	690948	A
SNP	40	238	NC_000913	700038	A
MOB	41	397,399	NC_000913	789812	IS2	-1	5
SNP	42	239	NC_000913	791688	A
SUB	43	240,241	NC_000913	809217	2	AG
SNP	44	242	NC_000913	917966	A
SNP	45	243	NC_000913	968837	A
SNP	46	244	NC_000913	1003243	T
SNP	47	245	NC_000913	1040126	T
SNP	48	247	NC_000913	1061935	A
MOB	49	398,400	NC_000913	1093481	IS2	1	5
SNP	50	248	NC_000913	1100070	A
SUB	51	249,250	NC_000913	1111727	2	TT
SNP	52	251	NC_000913	1123556	T
SNP	53	252	NC_000913	1169836	G
SNP	54	253	NC_000913	1189980	G
SNP	55	254	NC_000913	1196220	T
SNP	56	255	NC_000913	1196232	T
SNP	57	256	NC_000913	1196245	C
SNP	58	257	NC_000913	1196247	G
SNP	59	258	NC_000913	1196277	T
SNP	60	259	NC_000913	1196280	C
SNP	61	260	NC_000913	1196283	G
SNP	62	261	NC_000913	1196292	T
SNP	63	262	NC_000913	1196304	A
SNP	64	263	NC_000913	1196316	A
SNP	65	264	NC_000913	1196325	G
MOB	66	392,402	NC_000913	1301050	IS1	1	9
SNP	67	265	NC_000913	1301992	T
SNP	68	266	NC_000913	1306736	G
SNP	69	267	NC_000913	1310770	G
SNP	70	268	NC_000913	1331947	T
SNP	71	269	NC_000913	1337394	G
SNP	72	270	NC_000913	1357202	T
SNP	73	271	NC_000913	1358859	C
SNP	74	272	NC_000913	1412897	A
SNP	75	273	NC_000913	1428087	T
MOB	76	403,404	NC_000913	1434343	IS5	1	4
SNP	77	274	NC_000913	1437145	A
DEL	78	381,406	NC_000913	1588756	970
SNP	79	275	NC_000913	1598172	G
SNP	80	276	NC_000913	1610076	G
SNP	81	277	NC_000913	1610440	T
SNP	82	278	NC_000913	1632837	G
SNP	83	279	NC_000913	1643679	T
MOB	84	407,408	NC_000913	1651851	IS2	-1	5
SNP	85	280	NC_000913	1652331	C
DEL	86	382,409	NC_000913	1704350	390
SNP	87	282	NC_000913	1721136	T
SNP	88	283	NC_000913	1738377	T
SNP	89	284	NC_000913	1776715	T
SNP	90	285	NC_000913	1856968	A
SNP	91	286	NC_000913	1894839	C
SNP	92	287	NC_000913	1975224	A
INS	93	410	NC_000913	1977451	CTGGAAAGTTGCAG	repeat_length=14	repeat_new_copies=2	repeat_ref_copies=1	repeat_seq=CTGGAAAGTTGCAG
SNP	94	288	NC_000913	1987499	A
SNP	95	289	NC_000913	2003276	C
SNP	96	290	NC_000913	2003462	A
SNP	97	291	NC_000913	2040433	A
DEL	98	292,293	NC_000913	2173363	2
SNP	99	294	NC_000913	2175991	A
SNP	100	295	NC_000913	2178759	C
SNP	101	296	NC_000913	2188087	C
DEL	102	384,415	NC_000913	2238416	19
DEL	103	297	NC_000913	2263441	1
MOB	104	412,417	NC_000913	2382507	IS1	1	9
SNP	105	298	NC_000913	2384808	T
SNP	106	299	NC_000913	2410419	A
SNP	107	300	NC_000913	2484827	T
SNP	108	302	NC_000913	2700747	A
SNP	109	303	NC_000913	2748396	A
SNP	110	304	NC_000913	2756976	A
SNP	111	305	NC_000913	2780060	A
SNP	112	306	NC_000913	2792209	A
SNP	113	307	NC_000913	2800435	A
MOB	114	418,419	NC_000913	2805802	IS1	1	9
SNP	115	308	NC_000913	2810925	A
SNP	116	309	NC_000913	2817850	A
SNP	117	310	NC_000913	2823288	T
SNP	118	311	NC_000913	2863773	T
SNP	119	312	NC_000913	2878077	T
SNP	120	314	NC_000913	2889365	T
SNP	121	315	NC_000913	2905825	T
MOB	122	420,421	NC_000913	2913392	IS2	-1	5
SNP	123	316	NC_000913	2926292	T
DEL	124	422	NC_000913	2942765	8
SNP	125	318	NC_000913	3028546	A
SNP	126	319	NC_000913	3050472	A
SNP	127	320	NC_000913	3061916	T
SNP	128	321	NC_000913	3065449	A
SNP	129	322	NC_000913	3065861	A
MOB	130	423,424	NC_000913	3078723	IS5	1	4
SNP	131	323	NC_000913	3089260	C
SNP	132	324	NC_000913	3090968	A
SUB	133	325,326	NC_000913	3336411	2	AT
SNP	134	327	NC_000913	3367944	A
SNP	135	328	NC_000913	3388041	G
SNP	136	330	NC_000913	3399929	T
SNP	137	331	NC_000913	3436697	A
SNP	138	332	NC_000913	3449779	A
SNP	139	333	NC_000913	3468768	T
SNP	140	335	NC_000913	3474425	C
SNP	141	336	NC_000913	3543877	A
INS	142	338	NC_000913	3560455	G
SNP	143	339	NC_000913	3629921	T
SNP	144	340	NC_000913	3682515	T
SNP	145	341	NC_000913	3696909	A
SNP	146	342	NC_000913	3707947	A
SNP	147	343	NC_000913	3725176	G
SNP	148	344	NC_000913	3761230	A
SNP	149	345	NC_000913	3771979	T
INS	150	346	NC_000913	3815883	C
INS	151	430	NC_000913	3822651	CAGGAT	repeat_length=6	repeat_new_copies=2	repeat_ref_copies=1	repeat_seq=CAGGAT
SNP	152	347	NC_000913	3823162	T
SNP	153	348	NC_000913	3869637	A
SNP	154	349	NC_000913	3878536	A
SNP	155	350	NC_000913	3883678	A
SNP	156	351	NC_000913	3912074	A
SNP	157	353	NC_000913	3931069	T
MOB	158	431,432	NC_000913	3938983	IS2	-1	5
SNP	159	354	NC_000913	3955304	T
SNP	160	355	NC_000913	3988115	T
SNP	161	356	NC_000913	3993531	C
SNP	162	357	NC_000913	3996049	A
SNP	163	358	NC_000913	4011802	T
MOB	164	411,426	NC_000913	4069379	IS1	1	9
SNP	165	359	NC_000913	4084903	G
SNP	166	360	NC_000913	4092703	G
SNP	167	361	NC_000913	4210041	A
SNP	168	362	NC_000913	4272878	G
SNP	169	363	NC_000913	4276716	T
MOB	170	413,427	NC_000913	4289448	IS1	1	9
INS	171	364,365	NC_000913	4296381	GC
SNP	172	366	NC_000913	4337390	T
SNP	173	367	NC_000913	4338916	T
SNP	174	368	NC_000913	4349993	T
SNP	175	369	NC_000913	4375354	A
SNP	176	370	NC_000913	4380367	T
SNP	177	371	NC_000913	4425688	A
SNP	178	372	NC_000913	4425696	A
SUB	179	373,374	NC_000913	4436956	2	TT
MOB	180	428,429	NC_000913	4452701	IS150	1	3
SNP	181	375	NC_000913	4532409	G
RA	182	.	NC_000913	89089	0	C	A	consensus_score=148.3	frequency=1	major_base=A	major_cov=17/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/26
RA	183	.	NC_000913	89103	0	G	C	consensus_score=132.9	frequency=1	major_base=C	major_cov=16/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=16/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=16/23
RA	184	.	NC_000913	89143	0	A	G	consensus_score=87.5	frequency=1	major_base=G	major_cov=9/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/17
RA	185	.	NC_000913	89145	0	G	T	consensus_score=84.5	frequency=1	major_base=T	major_cov=9/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/17
RA	186	.	NC_000913	89239	0	G	A	consensus_score=131.2	frequency=1	major_base=A	major_cov=19/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/19
RA	187	.	NC_000913	89241	0	C	A	consensus_score=129.9	frequency=1	major_base=A	major_cov=19/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=19/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=19/19
RA	188	.	NC_000913	89263	0	A	G	bias_e_value=3742010	bias_p_value=0.80618	consensus_score=131.8	fisher_strand_p_value=0.475	frequency=1	ks_quality_p_value=0.939112	major_base=G	major_cov=21/18	major_frequency=9.750e-01	minor_base=T	minor_cov=0/1	new_cov=21/18	polymorphism_frequency=9.750e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/19
RA	189	.	NC_000913	89316	0	T	C	bias_e_value=4637220	bias_p_value=0.999045	consensus_score=125.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.956617	major_base=C	major_cov=19/18	major_frequency=9.487e-01	minor_base=A	minor_cov=1/1	new_cov=19/18	polymorphism_frequency=9.487e-01	polymorphism_score=-4.9	prediction=consensus	ref_cov=1/0	total_cov=21/19
RA	190	.	NC_000913	89321	0	A	G	bias_e_value=3819650	bias_p_value=0.822908	consensus_score=138.5	fisher_strand_p_value=0.47619	frequency=1	ks_quality_p_value=0.981589	major_base=G	major_cov=22/19	major_frequency=9.762e-01	minor_base=T	minor_cov=0/1	new_cov=22/19	polymorphism_frequency=9.762e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/20
RA	191	.	NC_000913	89471	0	T	G	consensus_score=134.2	frequency=1	major_base=G	major_cov=22/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/17
RA	192	.	NC_000913	89570	0	A	C	consensus_score=148.9	frequency=1	major_base=C	major_cov=27/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/16
RA	193	.	NC_000913	89699	0	T	C	bias_e_value=4640490	bias_p_value=0.999749	consensus_score=199.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.977696	major_base=C	major_cov=33/23	major_frequency=9.825e-01	minor_base=A	minor_cov=1/0	new_cov=33/23	polymorphism_frequency=9.825e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=0/0	total_cov=34/23
RA	194	.	NC_000913	89754	0	T	C	bias_e_value=2922490	bias_p_value=0.629623	consensus_score=182.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.274692	major_base=C	major_cov=30/23	major_frequency=9.815e-01	minor_base=T	minor_cov=1/0	new_cov=30/23	polymorphism_frequency=9.815e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=31/23
RA	195	.	NC_000913	90432	0	A	G	bias_e_value=4601260	bias_p_value=0.991297	consensus_score=236.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.871005	major_base=G	major_cov=27/41	major_frequency=9.855e-01	minor_base=A	minor_cov=0/1	new_cov=27/41	polymorphism_frequency=9.855e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/1	total_cov=27/42
RA	196	.	NC_000913	90435	0	T	C	bias_e_value=3947370	bias_p_value=0.850423	consensus_score=236.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.505599	major_base=C	major_cov=27/41	major_frequency=9.855e-01	minor_base=T	minor_cov=0/1	new_cov=27/41	polymorphism_frequency=9.855e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/1	total_cov=27/42
RA	197	.	NC_000913	91904	0	G	A	bias_e_value=1154310	bias_p_value=0.248684	consensus_score=196.0	fisher_strand_p_value=0.244792	frequency=1	ks_quality_p_value=0.274578	major_base=A	major_cov=29/32	major_frequency=9.531e-01	minor_base=G	minor_cov=0/3	new_cov=29/32	polymorphism_frequency=9.531e-01	polymorphism_score=1.0	prediction=consensus	ref_cov=0/3	total_cov=29/36
RA	198	.	NC_000913	91916	0	C	T	bias_e_value=1701930	bias_p_value=0.366664	consensus_score=197.8	fisher_strand_p_value=0.24965	frequency=1	ks_quality_p_value=0.466103	major_base=T	major_cov=29/34	major_frequency=9.545e-01	minor_base=C	minor_cov=0/3	new_cov=29/34	polymorphism_frequency=9.545e-01	polymorphism_score=1.5	prediction=consensus	ref_cov=0/3	total_cov=30/37
RA	199	.	NC_000913	91922	0	G	A	bias_e_value=1896660	bias_p_value=0.408618	consensus_score=205.9	fisher_strand_p_value=0.252885	frequency=1	ks_quality_p_value=0.540344	major_base=A	major_cov=28/34	major_frequency=9.538e-01	minor_base=G	minor_cov=0/3	new_cov=28/34	polymorphism_frequency=9.538e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=0/3	total_cov=28/37
RA	200	.	NC_000913	91949	0	C	T	bias_e_value=3978410	bias_p_value=0.857111	consensus_score=232.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.515547	major_base=T	major_cov=34/35	major_frequency=9.857e-01	minor_base=C	minor_cov=0/1	new_cov=34/35	polymorphism_frequency=9.857e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/1	total_cov=34/36
RA	201	.	NC_000913	92096	0	A	T	bias_e_value=3513080	bias_p_value=0.75686	consensus_score=261.5	fisher_strand_p_value=0.38961	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=47/29	major_frequency=9.870e-01	minor_base=G	minor_cov=0/1	new_cov=47/29	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=47/30
RA	202	.	NC_000913	92162	0	C	T	bias_e_value=3440270	bias_p_value=0.741173	consensus_score=264.3	fisher_strand_p_value=0.373333	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=47/27	major_frequency=9.867e-01	minor_base=C	minor_cov=0/1	new_cov=47/27	polymorphism_frequency=9.867e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=47/28
RA	203	.	NC_000913	92327	0	G	T	bias_e_value=4186570	bias_p_value=0.901958	consensus_score=309.0	fisher_strand_p_value=0.629842	frequency=1	ks_quality_p_value=0.938717	major_base=T	major_cov=39/49	major_frequency=9.565e-01	minor_base=G	minor_cov=1/3	new_cov=39/49	polymorphism_frequency=9.565e-01	polymorphism_score=0.5	prediction=consensus	ref_cov=1/3	total_cov=40/52
RA	204	.	NC_000913	92354	0	A	G	bias_e_value=4204690	bias_p_value=0.905862	consensus_score=329.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.598762	major_base=G	major_cov=37/55	major_frequency=9.684e-01	minor_base=A	minor_cov=1/2	new_cov=37/55	polymorphism_frequency=9.684e-01	polymorphism_score=-1.6	prediction=consensus	ref_cov=1/2	total_cov=38/57
RA	205	.	NC_000913	92687	0	A	G	bias_e_value=3251980	bias_p_value=0.700609	consensus_score=194.6	fisher_strand_p_value=0.579133	frequency=1	ks_quality_p_value=0.57726	major_base=G	major_cov=33/25	major_frequency=9.508e-01	minor_base=A	minor_cov=1/2	new_cov=33/25	polymorphism_frequency=9.508e-01	polymorphism_score=1.1	prediction=consensus	ref_cov=1/2	total_cov=34/28
RA	206	.	NC_000913	92810	0	T	C	consensus_score=233.1	frequency=1	major_base=C	major_cov=35/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/30
RA	207	.	NC_000913	92843	0	A	G	consensus_score=215.1	frequency=1	major_base=G	major_cov=32/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=32/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=32/30
RA	208	.	NC_000913	94278	0	G	A	consensus_score=239.2	frequency=1	major_base=A	major_cov=31/37	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/37	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/37
RA	209	.	NC_000913	134256	0	G	T	bias_e_value=3570580	bias_p_value=0.769247	consensus_score=120.5	fisher_strand_p_value=0.581272	frequency=1	ks_quality_p_value=0.693295	major_base=T	major_cov=17/22	major_frequency=9.286e-01	minor_base=G	minor_cov=2/1	new_cov=17/22	polymorphism_frequency=9.286e-01	polymorphism_score=1.3	prediction=consensus	ref_cov=2/1	total_cov=19/23
RA	210	.	NC_000913	244565	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=157.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=24/25	major_frequency=9.800e-01	minor_base=G	minor_cov=0/1	new_cov=24/25	polymorphism_frequency=9.800e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/26
RA	211	.	NC_000913	246747	0	G	T	bias_e_value=4272180	bias_p_value=0.9204	consensus_score=93.8	fisher_strand_p_value=0.633858	frequency=1	ks_quality_p_value=0.99159	major_base=T	major_cov=19/13	major_frequency=8.649e-01	minor_base=G	minor_cov=2/3	new_cov=19/13	polymorphism_frequency=8.649e-01	polymorphism_score=4.7	prediction=consensus	ref_cov=2/3	total_cov=21/16
RA	212	.	NC_000913	284535	0	T	G	bias_e_value=623579	bias_p_value=0.134344	consensus_score=357.2	fisher_strand_p_value=0.0568655	frequency=1	ks_quality_p_value=0.52329	major_base=G	major_cov=38/64	major_frequency=9.714e-01	minor_base=T	minor_cov=3/0	new_cov=38/64	polymorphism_frequency=9.714e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=3/0	total_cov=41/64
RA	213	.	NC_000913	300120	0	C	G	bias_e_value=132744	bias_p_value=0.0285985	consensus_reject=FREQUENCY_CUTOFF	consensus_score=94.6	fisher_strand_p_value=0.00445968	frequency=2.679e-01	ks_quality_p_value=1	major_base=C	major_cov=20/21	major_frequency=7.321e-01	minor_base=G	minor_cov=1/14	new_cov=1/14	polymorphism_frequency=2.679e-01	polymorphism_score=12.7	prediction=polymorphism	ref_cov=20/21	total_cov=21/36
RA	214	.	NC_000913	313543	0	G	A	bias_e_value=4616950	bias_p_value=0.994678	consensus_score=101.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.898621	major_base=A	major_cov=16/15	major_frequency=9.118e-01	minor_base=G	minor_cov=1/2	new_cov=16/15	polymorphism_frequency=9.118e-01	polymorphism_score=-0.2	prediction=consensus	ref_cov=1/2	total_cov=17/17
RA	215	.	NC_000913	419294	0	A	G	bias_e_value=4466430	bias_p_value=0.96225	consensus_score=129.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.738124	major_base=G	major_cov=16/22	major_frequency=9.744e-01	minor_base=A	minor_cov=0/1	new_cov=16/22	polymorphism_frequency=9.744e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=16/23
RA	216	.	NC_000913	480295	0	G	A	bias_e_value=4639160	bias_p_value=0.999463	consensus_score=63.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.967416	major_base=A	major_cov=9/12	major_frequency=9.130e-01	minor_base=G	minor_cov=1/1	new_cov=9/12	polymorphism_frequency=9.130e-01	polymorphism_score=-0.7	prediction=consensus	ref_cov=1/1	total_cov=10/13
RA	217	.	NC_000913	480296	0	G	A	bias_e_value=4040610	bias_p_value=0.870511	consensus_score=57.1	fisher_strand_p_value=0.544156	frequency=1	ks_quality_p_value=0.985748	major_base=A	major_cov=7/12	major_frequency=8.636e-01	minor_base=G	minor_cov=2/1	new_cov=7/12	polymorphism_frequency=8.636e-01	polymorphism_score=-0.5	prediction=consensus	ref_cov=2/1	total_cov=10/13
RA	218	.	NC_000913	553161	0	G	A	bias_e_value=3675220	bias_p_value=0.791792	consensus_score=217.9	fisher_strand_p_value=0.469697	frequency=1	ks_quality_p_value=0.912675	major_base=A	major_cov=30/35	major_frequency=9.848e-01	minor_base=G	minor_cov=1/0	new_cov=30/35	polymorphism_frequency=9.848e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=1/0	total_cov=31/35
RA	219	.	NC_000913	566190	0	C	A	bias_e_value=593577	bias_p_value=0.12788	consensus_reject=FREQUENCY_CUTOFF	consensus_score=174.0	fisher_strand_p_value=0.0550957	frequency=2.099e-01	ks_quality_p_value=0.507014	major_base=C	major_cov=31/33	major_frequency=7.901e-01	minor_base=A	minor_cov=13/4	new_cov=13/4	polymorphism_frequency=2.099e-01	polymorphism_score=32.9	prediction=polymorphism	ref_cov=31/33	total_cov=44/37
RA	220	.	NC_000913	566236	0	A	G	bias_e_value=308473	bias_p_value=0.0664575	consensus_reject=FREQUENCY_CUTOFF	consensus_score=147.2	fisher_strand_p_value=0.0805584	frequency=2.027e-01	ks_quality_p_value=0.152854	major_base=A	major_cov=26/33	major_frequency=7.973e-01	minor_base=G	minor_cov=11/4	new_cov=11/4	polymorphism_frequency=2.027e-01	polymorphism_score=36.9	prediction=polymorphism	ref_cov=26/33	total_cov=37/38
RA	221	.	NC_000913	566275	0	A	G	bias_e_value=980833	bias_p_value=0.211311	consensus_reject=FREQUENCY_CUTOFF	consensus_score=131.5	fisher_strand_p_value=0.15346	frequency=2.174e-01	ks_quality_p_value=0.351208	major_base=A	major_cov=24/30	major_frequency=7.826e-01	minor_base=G	minor_cov=10/5	new_cov=10/5	polymorphism_frequency=2.174e-01	polymorphism_score=33.1	prediction=polymorphism	ref_cov=24/30	total_cov=35/35
RA	222	.	NC_000913	566283	0	G	C	bias_e_value=47435.9	bias_p_value=0.0102196	consensus_reject=FREQUENCY_CUTOFF	consensus_score=152.5	fisher_strand_p_value=0.0759116	frequency=2.154e-01	ks_quality_p_value=0.0176828	major_base=G	major_cov=22/29	major_frequency=7.846e-01	minor_base=C	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.154e-01	polymorphism_score=44.7	prediction=polymorphism	ref_cov=22/29	total_cov=32/35
RA	223	.	NC_000913	566284	0	C	G	bias_e_value=94716.8	bias_p_value=0.0204058	consensus_reject=FREQUENCY_CUTOFF	consensus_score=158.6	fisher_strand_p_value=0.0681979	frequency=2.121e-01	ks_quality_p_value=0.0439351	major_base=C	major_cov=21/31	major_frequency=7.879e-01	minor_base=G	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.121e-01	polymorphism_score=45.8	prediction=polymorphism	ref_cov=21/31	total_cov=32/35
RA	224	.	NC_000913	566320	0	A	C	bias_e_value=728882	bias_p_value=0.157031	consensus_reject=FREQUENCY_CUTOFF	consensus_score=131.0	fisher_strand_p_value=0.039285	frequency=2.154e-01	ks_quality_p_value=0.926799	major_base=A	major_cov=20/31	major_frequency=7.846e-01	minor_base=C	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.154e-01	polymorphism_score=28.1	prediction=polymorphism	ref_cov=20/31	total_cov=31/35
RA	225	.	NC_000913	566323	0	C	A	bias_e_value=630857	bias_p_value=0.135912	consensus_reject=FREQUENCY_CUTOFF	consensus_score=165.8	fisher_strand_p_value=0.039061	frequency=2.000e-01	ks_quality_p_value=0.773258	major_base=C	major_cov=22/34	major_frequency=8.000e-01	minor_base=A	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.000e-01	polymorphism_score=28.9	prediction=polymorphism	ref_cov=22/34	total_cov=32/38
RA	226	.	NC_000913	566326	0	T	C	bias_e_value=631748	bias_p_value=0.136104	consensus_reject=FREQUENCY_CUTOFF	consensus_score=145.7	fisher_strand_p_value=0.0323366	frequency=2.029e-01	ks_quality_p_value=0.935754	major_base=T	major_cov=20/35	major_frequency=7.971e-01	minor_base=C	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.029e-01	polymorphism_score=31.9	prediction=polymorphism	ref_cov=20/35	total_cov=30/39
RA	227	.	NC_000913	566329	0	T	G	bias_e_value=606837	bias_p_value=0.130737	consensus_reject=FREQUENCY_CUTOFF	consensus_score=139.0	fisher_strand_p_value=0.0323366	frequency=2.029e-01	ks_quality_p_value=0.888652	major_base=T	major_cov=20/35	major_frequency=7.971e-01	minor_base=G	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.029e-01	polymorphism_score=42.9	prediction=polymorphism	ref_cov=20/35	total_cov=30/39
RA	228	.	NC_000913	566332	0	T	G	bias_e_value=217951	bias_p_value=0.0469555	consensus_reject=FREQUENCY_CUTOFF	consensus_score=123.9	fisher_strand_p_value=0.0157588	frequency=2.090e-01	ks_quality_p_value=0.51198	major_base=T	major_cov=18/35	major_frequency=7.910e-01	minor_base=G	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.090e-01	polymorphism_score=44.2	prediction=polymorphism	ref_cov=18/35	total_cov=29/39
RA	229	.	NC_000913	566335	0	C	T	bias_e_value=378168	bias_p_value=0.0814728	consensus_reject=FREQUENCY_CUTOFF	consensus_score=146.8	fisher_strand_p_value=0.0311867	frequency=2.059e-01	ks_quality_p_value=0.507697	major_base=C	major_cov=19/35	major_frequency=7.941e-01	minor_base=T	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.059e-01	polymorphism_score=30.1	prediction=polymorphism	ref_cov=19/35	total_cov=29/39
RA	230	.	NC_000913	566344	0	A	G	bias_e_value=615873	bias_p_value=0.132684	consensus_reject=FREQUENCY_CUTOFF	consensus_score=112.7	fisher_strand_p_value=0.0837102	frequency=2.308e-01	ks_quality_p_value=0.349848	major_base=A	major_cov=20/30	major_frequency=7.692e-01	minor_base=G	minor_cov=10/5	new_cov=10/5	polymorphism_frequency=2.308e-01	polymorphism_score=31.8	prediction=polymorphism	ref_cov=20/30	total_cov=30/36
RA	231	.	NC_000913	566347	0	G	A	bias_e_value=469071	bias_p_value=0.101057	consensus_reject=FREQUENCY_CUTOFF	consensus_score=134.3	fisher_strand_p_value=0.0346381	frequency=2.090e-01	ks_quality_p_value=0.598279	major_base=G	major_cov=20/33	major_frequency=7.910e-01	minor_base=A	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.090e-01	polymorphism_score=28.9	prediction=polymorphism	ref_cov=20/33	total_cov=30/37
RA	232	.	NC_000913	566350	0	C	G	bias_e_value=589591	bias_p_value=0.127022	consensus_reject=FREQUENCY_CUTOFF	consensus_score=155.9	fisher_strand_p_value=0.0366394	frequency=2.121e-01	ks_quality_p_value=0.755869	major_base=C	major_cov=20/32	major_frequency=7.879e-01	minor_base=G	minor_cov=10/4	new_cov=10/4	polymorphism_frequency=2.121e-01	polymorphism_score=39.2	prediction=polymorphism	ref_cov=20/32	total_cov=30/37
RA	233	.	NC_000913	581335	0	C	A	bias_e_value=3456130	bias_p_value=0.74459	consensus_reject=FREQUENCY_CUTOFF	consensus_score=297.3	fisher_strand_p_value=0.832229	frequency=2.044e-01	ks_quality_p_value=0.452782	major_base=C	major_cov=59/50	major_frequency=7.956e-01	minor_base=A	minor_cov=14/14	new_cov=14/14	polymorphism_frequency=2.044e-01	polymorphism_score=71.6	prediction=polymorphism	ref_cov=59/50	total_cov=73/64
RA	234	.	NC_000913	581337	0	G	A	bias_e_value=2434510	bias_p_value=0.524492	consensus_reject=FREQUENCY_CUTOFF	consensus_score=284.7	fisher_strand_p_value=0.66941	frequency=2.000e-01	ks_quality_p_value=0.301194	major_base=G	major_cov=58/50	major_frequency=8.000e-01	minor_base=A	minor_cov=13/14	new_cov=13/14	polymorphism_frequency=2.000e-01	polymorphism_score=69.4	prediction=polymorphism	ref_cov=58/50	total_cov=72/64
RA	235	.	NC_000913	613283	0	A	G	bias_e_value=5.83544	bias_p_value=1.25719e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=125.8	fisher_strand_p_value=7.20629e-08	frequency=2.716e-01	ks_quality_p_value=1	major_base=A	major_cov=22/37	major_frequency=7.284e-01	minor_base=G	minor_cov=22/0	new_cov=22/0	polymorphism_frequency=2.716e-01	polymorphism_score=18.3	prediction=polymorphism	ref_cov=22/37	total_cov=46/38
RA	236	.	NC_000913	640880	0	T	G	bias_e_value=1.33649e-07	bias_p_value=2.87934e-14	consensus_reject=FREQUENCY_CUTOFF	consensus_score=271.7	fisher_strand_p_value=8.0529e-16	frequency=2.149e-01	ks_quality_p_value=1	major_base=T	major_cov=12/83	major_frequency=7.851e-01	minor_base=G	minor_cov=25/1	new_cov=25/1	polymorphism_frequency=2.149e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=12/83	total_cov=38/84
RA	237	.	NC_000913	690948	0	G	A	bias_e_value=4641490	bias_p_value=0.999966	consensus_score=156.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.991709	major_base=A	major_cov=23/23	major_frequency=9.787e-01	minor_base=G	minor_cov=1/0	new_cov=23/23	polymorphism_frequency=9.787e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=1/0	total_cov=24/23
RA	238	.	NC_000913	700038	0	G	A	consensus_score=239.0	frequency=1	major_base=A	major_cov=31/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=31/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/35
RA	239	.	NC_000913	791688	0	G	A	bias_e_value=2095000	bias_p_value=0.451347	consensus_score=182.1	fisher_strand_p_value=0.236364	frequency=1	ks_quality_p_value=0.672624	major_base=A	major_cov=25/28	major_frequency=9.636e-01	minor_base=G	minor_cov=2/0	new_cov=25/28	polymorphism_frequency=9.636e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=2/0	total_cov=27/28
RA	240	.	NC_000913	809217	0	C	A	consensus_score=171.8	frequency=1	major_base=A	major_cov=18/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/30
RA	241	.	NC_000913	809218	0	A	G	bias_e_value=4641510	bias_p_value=0.999968	consensus_score=175.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.992053	major_base=G	major_cov=18/29	major_frequency=9.792e-01	minor_base=T	minor_cov=0/1	new_cov=18/29	polymorphism_frequency=9.792e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/30
RA	242	.	NC_000913	917966	0	G	A	consensus_score=246.8	frequency=1	major_base=A	major_cov=35/32	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=35/32	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=35/32
RA	243	.	NC_000913	968837	0	G	A	bias_e_value=4336670	bias_p_value=0.934294	consensus_score=179.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.66013	major_base=A	major_cov=15/38	major_frequency=9.464e-01	minor_base=G	minor_cov=1/2	new_cov=15/38	polymorphism_frequency=9.464e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/2	total_cov=17/40
RA	244	.	NC_000913	1003243	0	G	T	bias_e_value=4185760	bias_p_value=0.901782	consensus_score=98.0	fisher_strand_p_value=0.590909	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=14/17	major_frequency=9.118e-01	minor_base=G	minor_cov=2/1	new_cov=14/17	polymorphism_frequency=9.118e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/1	total_cov=17/18
RA	245	.	NC_000913	1040126	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=191.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=26/32	major_frequency=8.788e-01	minor_base=G	minor_cov=3/5	new_cov=26/32	polymorphism_frequency=8.788e-01	polymorphism_score=3.4	prediction=consensus	ref_cov=3/5	total_cov=29/37
RA	246	.	NC_000913	1061930	0	G	A	bias_e_value=11.9113	bias_p_value=2.56617e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=88.3	fisher_strand_p_value=1.53775e-07	frequency=3.103e-01	ks_quality_p_value=1	major_base=G	major_cov=29/11	major_frequency=6.897e-01	minor_base=A	minor_cov=0/18	new_cov=0/18	polymorphism_frequency=3.103e-01	polymorphism_score=19.1	prediction=polymorphism	ref_cov=29/11	total_cov=29/29
RA	247	.	NC_000913	1061935	0	G	A	bias_e_value=4542400	bias_p_value=0.978618	consensus_score=135.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.800463	major_base=A	major_cov=24/25	major_frequency=9.245e-01	minor_base=G	minor_cov=2/2	new_cov=24/25	polymorphism_frequency=9.245e-01	polymorphism_score=0.4	prediction=consensus	ref_cov=2/2	total_cov=26/30
RA	248	.	NC_000913	1100070	0	G	A	consensus_score=175.2	frequency=1	major_base=A	major_cov=24/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/26
RA	249	.	NC_000913	1111727	0	C	T	bias_e_value=2560600	bias_p_value=0.551658	consensus_score=147.3	fisher_strand_p_value=0.383545	frequency=1	ks_quality_p_value=0.571103	major_base=T	major_cov=29/19	major_frequency=8.889e-01	minor_base=C	minor_cov=2/4	new_cov=29/19	polymorphism_frequency=8.889e-01	polymorphism_score=9.6	prediction=consensus	ref_cov=2/4	total_cov=31/23
RA	250	.	NC_000913	1111728	0	C	T	bias_e_value=2111550	bias_p_value=0.454914	consensus_score=141.4	fisher_strand_p_value=0.219045	frequency=1	ks_quality_p_value=0.734688	major_base=T	major_cov=29/18	major_frequency=8.868e-01	minor_base=C	minor_cov=2/4	new_cov=29/18	polymorphism_frequency=8.868e-01	polymorphism_score=10.0	prediction=consensus	ref_cov=2/4	total_cov=31/23
RA	251	.	NC_000913	1123556	0	C	T	bias_e_value=3851470	bias_p_value=0.829763	consensus_score=115.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.476553	major_base=T	major_cov=14/20	major_frequency=9.714e-01	minor_base=C	minor_cov=0/1	new_cov=14/20	polymorphism_frequency=9.714e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=0/1	total_cov=14/21
RA	252	.	NC_000913	1169836	0	A	G	consensus_score=161.0	frequency=1	major_base=G	major_cov=26/18	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=26/18	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=26/18
RA	253	.	NC_000913	1189980	0	A	G	bias_e_value=4641620	bias_p_value=0.999994	consensus_score=170.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99646	major_base=G	major_cov=24/23	major_frequency=9.792e-01	minor_base=A	minor_cov=0/1	new_cov=24/23	polymorphism_frequency=9.792e-01	polymorphism_score=-6.2	prediction=consensus	ref_cov=0/1	total_cov=24/24
RA	254	.	NC_000913	1196220	0	C	T	bias_e_value=3336670	bias_p_value=0.718854	consensus_score=92.7	fisher_strand_p_value=0.351351	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=12/24	major_frequency=9.730e-01	minor_base=C	minor_cov=1/0	new_cov=12/24	polymorphism_frequency=9.730e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=13/24
RA	255	.	NC_000913	1196232	0	C	T	consensus_score=88.5	frequency=1	major_base=T	major_cov=11/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/23
RA	256	.	NC_000913	1196245	0	T	C	consensus_score=88.0	frequency=1	major_base=C	major_cov=11/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/22
RA	257	.	NC_000913	1196247	0	A	G	consensus_score=85.2	frequency=1	major_base=G	major_cov=11/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/22
RA	258	.	NC_000913	1196277	0	C	T	consensus_score=53.9	frequency=1	major_base=T	major_cov=8/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/17
RA	259	.	NC_000913	1196280	0	G	C	consensus_score=56.5	frequency=1	major_base=C	major_cov=8/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/17
RA	260	.	NC_000913	1196283	0	A	G	consensus_score=50.1	frequency=1	major_base=G	major_cov=8/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/17
RA	261	.	NC_000913	1196292	0	C	T	consensus_score=47.9	frequency=1	major_base=T	major_cov=7/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/16
RA	262	.	NC_000913	1196304	0	G	A	consensus_score=43.2	frequency=1	major_base=A	major_cov=6/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/16
RA	263	.	NC_000913	1196316	0	T	A	consensus_score=28.0	frequency=1	major_base=A	major_cov=6/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/11
RA	264	.	NC_000913	1196325	0	A	G	consensus_score=27.6	frequency=1	major_base=G	major_cov=5/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=5/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/11
RA	265	.	NC_000913	1301992	0	A	T	bias_e_value=4641340	bias_p_value=0.999933	consensus_score=148.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.988462	major_base=T	major_cov=32/12	major_frequency=9.362e-01	minor_base=A	minor_cov=2/1	new_cov=32/12	polymorphism_frequency=9.362e-01	polymorphism_score=-5.6	prediction=consensus	ref_cov=2/1	total_cov=34/14
RA	266	.	NC_000913	1306736	0	T	G	consensus_score=111.7	frequency=1	major_base=G	major_cov=11/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/23
RA	267	.	NC_000913	1310770	0	A	G	bias_e_value=4641650	bias_p_value=0.999999	consensus_score=203.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.998725	major_base=G	major_cov=25/30	major_frequency=9.649e-01	minor_base=A	minor_cov=1/1	new_cov=25/30	polymorphism_frequency=9.649e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=1/1	total_cov=26/31
RA	268	.	NC_000913	1331947	0	C	T	consensus_score=152.3	frequency=1	major_base=T	major_cov=23/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=23/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=23/22
RA	269	.	NC_000913	1337394	0	A	G	bias_e_value=4641650	bias_p_value=1	consensus_score=205.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=28/29	major_frequency=9.828e-01	minor_base=A	minor_cov=1/0	new_cov=28/29	polymorphism_frequency=9.828e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=29/29
RA	270	.	NC_000913	1357202	0	C	T	bias_e_value=2718050	bias_p_value=0.585578	consensus_score=136.6	fisher_strand_p_value=0.414634	frequency=1	ks_quality_p_value=0.584029	major_base=T	major_cov=24/16	major_frequency=9.756e-01	minor_base=C	minor_cov=0/1	new_cov=24/16	polymorphism_frequency=9.756e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=24/17
RA	271	.	NC_000913	1358859	0	T	C	bias_e_value=1999590	bias_p_value=0.430793	consensus_score=117.1	fisher_strand_p_value=0.148017	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=16/26	major_frequency=8.936e-01	minor_base=A	minor_cov=4/1	new_cov=16/26	polymorphism_frequency=8.936e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/0	total_cov=20/27
RA	272	.	NC_000913	1412897	0	G	A	bias_e_value=3148020	bias_p_value=0.678212	consensus_score=95.4	fisher_strand_p_value=0.448276	frequency=1	ks_quality_p_value=0.701398	major_base=A	major_cov=12/16	major_frequency=9.655e-01	minor_base=G	minor_cov=1/0	new_cov=12/16	polymorphism_frequency=9.655e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=1/0	total_cov=13/16
RA	273	.	NC_000913	1428087	0	C	T	bias_e_value=4641380	bias_p_value=0.999942	consensus_score=226.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.989262	major_base=T	major_cov=45/31	major_frequency=9.744e-01	minor_base=C	minor_cov=1/1	new_cov=45/31	polymorphism_frequency=9.744e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=1/1	total_cov=46/32
RA	274	.	NC_000913	1437145	0	T	A	bias_e_value=4130300	bias_p_value=0.889834	consensus_score=56.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.56898	major_base=A	major_cov=13/6	major_frequency=9.048e-01	minor_base=T	minor_cov=1/1	new_cov=13/6	polymorphism_frequency=9.048e-01	polymorphism_score=-1.4	prediction=consensus	ref_cov=1/1	total_cov=14/7
RA	275	.	NC_000913	1598172	0	T	G	consensus_score=69.2	frequency=1	major_base=G	major_cov=14/7	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/7	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/7
RA	276	.	NC_000913	1610076	0	T	G	bias_e_value=2470180	bias_p_value=0.532178	consensus_score=205.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.206458	major_base=G	major_cov=32/30	major_frequency=9.254e-01	minor_base=T	minor_cov=3/2	new_cov=32/30	polymorphism_frequency=9.254e-01	polymorphism_score=7.9	prediction=consensus	ref_cov=3/2	total_cov=35/32
RA	277	.	NC_000913	1610440	0	C	T	bias_e_value=3700670	bias_p_value=0.797275	consensus_score=150.8	fisher_strand_p_value=0.491212	frequency=1	ks_quality_p_value=0.885998	major_base=T	major_cov=22/23	major_frequency=9.574e-01	minor_base=C	minor_cov=0/2	new_cov=22/23	polymorphism_frequency=9.574e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=0/2	total_cov=22/25
RA	278	.	NC_000913	1632837	0	A	G	consensus_score=71.3	frequency=1	major_base=G	major_cov=11/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/16
RA	279	.	NC_000913	1643679	0	A	T	bias_e_value=2254440	bias_p_value=0.485697	consensus_score=187.3	fisher_strand_p_value=0.179221	frequency=1	ks_quality_p_value=0.994723	major_base=T	major_cov=22/32	major_frequency=9.643e-01	minor_base=A	minor_cov=2/0	new_cov=22/32	polymorphism_frequency=9.643e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=24/32
RA	280	.	NC_000913	1652331	0	T	C	consensus_score=59.9	frequency=1	major_base=C	major_cov=7/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/10
RA	281	.	NC_000913	1715620	0	A	C	bias_e_value=27241.2	bias_p_value=0.00586886	consensus_reject=FREQUENCY_CUTOFF	consensus_score=77.6	fisher_strand_p_value=0.000711543	frequency=2.692e-01	ks_quality_p_value=1	major_base=A	major_cov=19/19	major_frequency=7.308e-01	minor_base=C	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=2.692e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=19/19	total_cov=19/33
RA	282	.	NC_000913	1721136	0	C	T	consensus_score=130.1	frequency=1	major_base=T	major_cov=17/19	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/19	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/19
RA	283	.	NC_000913	1738377	0	C	T	bias_e_value=4592040	bias_p_value=0.989312	consensus_score=163.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.857404	major_base=T	major_cov=25/25	major_frequency=9.615e-01	minor_base=C	minor_cov=1/1	new_cov=25/25	polymorphism_frequency=9.615e-01	polymorphism_score=-2.0	prediction=consensus	ref_cov=1/1	total_cov=26/26
RA	284	.	NC_000913	1776715	0	A	T	consensus_score=131.0	frequency=1	major_base=T	major_cov=14/23	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/23	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/23
RA	285	.	NC_000913	1856968	0	T	A	bias_e_value=2871240	bias_p_value=0.618581	consensus_score=129.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.266248	major_base=A	major_cov=20/19	major_frequency=9.512e-01	minor_base=T	minor_cov=1/1	new_cov=20/19	polymorphism_frequency=9.512e-01	polymorphism_score=-0.1	prediction=consensus	ref_cov=1/1	total_cov=21/20
RA	286	.	NC_000913	1894839	0	T	C	bias_e_value=3746830	bias_p_value=0.807219	consensus_score=133.4	fisher_strand_p_value=0.447368	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=21/16	major_frequency=9.737e-01	minor_base=.	minor_cov=0/1	new_cov=21/16	polymorphism_frequency=9.737e-01	polymorphism_score=-4.7	prediction=consensus	ref_cov=0/0	total_cov=21/17
RA	287	.	NC_000913	1975224	0	G	A	consensus_score=163.9	frequency=1	major_base=A	major_cov=21/30	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/30	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/30
RA	288	.	NC_000913	1987499	0	C	A	bias_e_value=3173760	bias_p_value=0.683756	consensus_score=90.4	fisher_strand_p_value=0.319244	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=12/16	major_frequency=8.750e-01	minor_base=C	minor_cov=3/1	new_cov=12/16	polymorphism_frequency=8.750e-01	polymorphism_score=1.0	prediction=consensus	ref_cov=3/1	total_cov=15/17
RA	289	.	NC_000913	2003276	0	A	C	consensus_score=188.1	frequency=1	major_base=C	major_cov=28/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=28/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=28/22
RA	290	.	NC_000913	2003462	0	C	A	consensus_score=127.4	frequency=1	major_base=A	major_cov=21/21	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/21	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/21
RA	291	.	NC_000913	2040433	0	C	A	bias_e_value=4625050	bias_p_value=0.996423	consensus_score=173.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.916618	major_base=A	major_cov=30/30	major_frequency=8.955e-01	minor_base=C	minor_cov=3/4	new_cov=30/30	polymorphism_frequency=8.955e-01	polymorphism_score=10.4	prediction=consensus	ref_cov=3/4	total_cov=33/34
RA	292	.	NC_000913	2173363	0	C	.	bias_e_value=255532	bias_p_value=0.0550519	consensus_score=111.4	fisher_strand_p_value=0.0129354	frequency=1	ks_quality_p_value=0.756329	major_base=.	major_cov=27/4	major_frequency=8.378e-01	minor_base=C	minor_cov=2/4	new_cov=27/4	polymorphism_frequency=8.378e-01	polymorphism_score=19.5	prediction=consensus	ref_cov=2/4	total_cov=29/8
RA	293	.	NC_000913	2173364	0	C	.	bias_e_value=255532	bias_p_value=0.0550519	consensus_score=113.1	fisher_strand_p_value=0.0129354	frequency=1	ks_quality_p_value=0.756329	major_base=.	major_cov=27/4	major_frequency=8.378e-01	minor_base=C	minor_cov=2/4	new_cov=27/4	polymorphism_frequency=8.378e-01	polymorphism_score=17.7	prediction=consensus	ref_cov=2/4	total_cov=29/8
RA	294	.	NC_000913	2175991	0	T	A	consensus_score=175.6	frequency=1	major_base=A	major_cov=29/24	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=29/24	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=29/24
RA	295	.	NC_000913	2178759	0	G	C	bias_e_value=3693130	bias_p_value=0.79565	consensus_score=97.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.433265	major_base=C	major_cov=8/20	major_frequency=9.032e-01	minor_base=G	minor_cov=1/2	new_cov=8/20	polymorphism_frequency=9.032e-01	polymorphism_score=4.1	prediction=consensus	ref_cov=1/2	total_cov=9/22
RA	296	.	NC_000913	2188087	0	T	C	consensus_score=126.2	frequency=1	major_base=C	major_cov=18/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=18/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=18/17
RA	297	.	NC_000913	2263441	0	C	.	bias_e_value=2294250	bias_p_value=0.494274	consensus_score=258.2	fisher_strand_p_value=0.297474	frequency=1	ks_quality_p_value=0.616152	major_base=.	major_cov=23/36	major_frequency=9.365e-01	minor_base=C	minor_cov=3/1	new_cov=23/36	polymorphism_frequency=9.365e-01	polymorphism_score=13.8	prediction=consensus	ref_cov=3/1	total_cov=26/38
RA	298	.	NC_000913	2384808	0	C	T	bias_e_value=2663990	bias_p_value=0.573931	consensus_score=143.6	fisher_strand_p_value=0.234043	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=24/21	major_frequency=9.574e-01	minor_base=C	minor_cov=0/2	new_cov=24/21	polymorphism_frequency=9.574e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/2	total_cov=24/23
RA	299	.	NC_000913	2410419	0	G	A	bias_e_value=2641890	bias_p_value=0.569171	consensus_score=170.4	fisher_strand_p_value=0.392157	frequency=1	ks_quality_p_value=0.58849	major_base=A	major_cov=31/19	major_frequency=9.804e-01	minor_base=G	minor_cov=0/1	new_cov=31/19	polymorphism_frequency=9.804e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=31/20
RA	300	.	NC_000913	2484827	0	C	T	consensus_score=112.7	frequency=1	major_base=T	major_cov=11/22	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/22	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/22
RA	301	.	NC_000913	2667126	0	A	C	bias_e_value=0.133232	bias_p_value=2.87037e-08	consensus_reject=FREQUENCY_CUTOFF	consensus_score=97.9	fisher_strand_p_value=1.33935e-09	frequency=3.182e-01	ks_quality_p_value=1	major_base=A	major_cov=37/8	major_frequency=6.818e-01	minor_base=C	minor_cov=1/20	new_cov=1/20	polymorphism_frequency=3.182e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=37/8	total_cov=38/28
RA	302	.	NC_000913	2700747	0	G	A	bias_e_value=4392390	bias_p_value=0.946299	consensus_score=165.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.690715	major_base=A	major_cov=26/20	major_frequency=9.787e-01	minor_base=G	minor_cov=1/0	new_cov=26/20	polymorphism_frequency=9.787e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=1/0	total_cov=27/20
RA	303	.	NC_000913	2748396	0	G	A	bias_e_value=4321660	bias_p_value=0.931061	consensus_score=161.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.652454	major_base=A	major_cov=29/22	major_frequency=9.444e-01	minor_base=G	minor_cov=2/1	new_cov=29/22	polymorphism_frequency=9.444e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=2/1	total_cov=31/24
RA	304	.	NC_000913	2756976	0	G	A	bias_e_value=3972790	bias_p_value=0.855901	consensus_score=176.1	fisher_strand_p_value=0.513725	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=29/20	major_frequency=9.608e-01	minor_base=C	minor_cov=2/0	new_cov=29/20	polymorphism_frequency=9.608e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=31/20
RA	305	.	NC_000913	2780060	0	G	A	bias_e_value=4004160	bias_p_value=0.862657	consensus_score=132.7	fisher_strand_p_value=0.630897	frequency=1	ks_quality_p_value=0.830601	major_base=A	major_cov=25/19	major_frequency=9.167e-01	minor_base=G	minor_cov=3/1	new_cov=25/19	polymorphism_frequency=9.167e-01	polymorphism_score=2.7	prediction=consensus	ref_cov=3/1	total_cov=28/20
RA	306	.	NC_000913	2792209	0	G	A	bias_e_value=4626490	bias_p_value=0.996734	consensus_score=258.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.92028	major_base=A	major_cov=37/38	major_frequency=9.615e-01	minor_base=G	minor_cov=2/1	new_cov=37/38	polymorphism_frequency=9.615e-01	polymorphism_score=-0.1	prediction=consensus	ref_cov=2/1	total_cov=39/39
RA	307	.	NC_000913	2800435	0	G	A	bias_e_value=3752530	bias_p_value=0.808448	consensus_score=92.3	fisher_strand_p_value=0.526882	frequency=1	ks_quality_p_value=0.851992	major_base=A	major_cov=11/18	major_frequency=9.355e-01	minor_base=G	minor_cov=0/2	new_cov=11/18	polymorphism_frequency=9.355e-01	polymorphism_score=-1.0	prediction=consensus	ref_cov=0/2	total_cov=11/20
RA	308	.	NC_000913	2810925	0	G	A	bias_e_value=3091300	bias_p_value=0.665992	consensus_score=146.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.304009	major_base=A	major_cov=17/26	major_frequency=9.556e-01	minor_base=G	minor_cov=1/1	new_cov=17/26	polymorphism_frequency=9.556e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=1/1	total_cov=18/27
RA	309	.	NC_000913	2817850	0	G	A	bias_e_value=3455230	bias_p_value=0.744396	consensus_score=114.8	fisher_strand_p_value=0.682985	frequency=1	ks_quality_p_value=0.551431	major_base=A	major_cov=17/25	major_frequency=8.750e-01	minor_base=G	minor_cov=3/3	new_cov=17/25	polymorphism_frequency=8.750e-01	polymorphism_score=6.1	prediction=consensus	ref_cov=3/3	total_cov=21/28
RA	310	.	NC_000913	2823288	0	C	T	bias_e_value=2479530	bias_p_value=0.53419	consensus_score=235.0	fisher_strand_p_value=0.614509	frequency=1	ks_quality_p_value=0.338052	major_base=T	major_cov=34/36	major_frequency=9.459e-01	minor_base=C	minor_cov=3/1	new_cov=34/36	polymorphism_frequency=9.459e-01	polymorphism_score=2.9	prediction=consensus	ref_cov=3/1	total_cov=37/37
RA	311	.	NC_000913	2863773	0	C	T	bias_e_value=3297350	bias_p_value=0.710382	consensus_score=200.6	fisher_strand_p_value=0.494048	frequency=1	ks_quality_p_value=0.694953	major_base=T	major_cov=32/30	major_frequency=9.688e-01	minor_base=C	minor_cov=2/0	new_cov=32/30	polymorphism_frequency=9.688e-01	polymorphism_score=-1.9	prediction=consensus	ref_cov=2/0	total_cov=35/30
RA	312	.	NC_000913	2878077	0	C	T	bias_e_value=4619260	bias_p_value=0.995177	consensus_score=109.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.903402	major_base=T	major_cov=12/23	major_frequency=9.722e-01	minor_base=C	minor_cov=0/1	new_cov=12/23	polymorphism_frequency=9.722e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/1	total_cov=12/24
RA	313	.	NC_000913	2878947	0	C	T	bias_e_value=11.6581	bias_p_value=2.51162e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=25.4	fisher_strand_p_value=1.50301e-07	frequency=4.000e-01	ks_quality_p_value=1	major_base=C	major_cov=1/17	major_frequency=6.000e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=4.000e-01	polymorphism_score=12.8	prediction=polymorphism	ref_cov=1/17	total_cov=13/17
RA	314	.	NC_000913	2889365	0	C	T	consensus_score=199.7	frequency=1	major_base=T	major_cov=21/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=21/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=21/38
RA	315	.	NC_000913	2905825	0	C	T	consensus_score=93.2	frequency=1	major_base=T	major_cov=15/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/12
RA	316	.	NC_000913	2926292	0	C	T	bias_e_value=2067000	bias_p_value=0.445315	consensus_score=111.1	fisher_strand_p_value=0.157658	frequency=1	ks_quality_p_value=0.987721	major_base=T	major_cov=22/13	major_frequency=9.459e-01	minor_base=G	minor_cov=0/2	new_cov=22/13	polymorphism_frequency=9.459e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/15
RA	317	.	NC_000913	2950173	0	A	G	bias_e_value=42.0973	bias_p_value=9.06947e-06	consensus_reject=FREQUENCY_CUTOFF	consensus_score=101.0	fisher_strand_p_value=5.91186e-07	frequency=2.453e-01	ks_quality_p_value=1	major_base=A	major_cov=9/31	major_frequency=7.547e-01	minor_base=G	minor_cov=13/0	new_cov=13/0	polymorphism_frequency=2.453e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=9/31	total_cov=22/31
RA	318	.	NC_000913	3028546	0	G	A	bias_e_value=4087940	bias_p_value=0.880708	consensus_score=117.1	fisher_strand_p_value=0.594595	frequency=1	ks_quality_p_value=0.930363	major_base=A	major_cov=16/19	major_frequency=9.211e-01	minor_base=G	minor_cov=2/1	new_cov=16/19	polymorphism_frequency=9.211e-01	polymorphism_score=2.0	prediction=consensus	ref_cov=2/1	total_cov=18/21
RA	319	.	NC_000913	3050472	0	G	A	bias_e_value=3901900	bias_p_value=0.840627	consensus_score=203.8	fisher_strand_p_value=0.491525	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=28/30	major_frequency=9.831e-01	minor_base=C	minor_cov=1/0	new_cov=28/30	polymorphism_frequency=9.831e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=29/31
RA	320	.	NC_000913	3061916	0	C	T	bias_e_value=4459170	bias_p_value=0.960686	consensus_score=355.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.733031	major_base=T	major_cov=51/53	major_frequency=9.720e-01	minor_base=C	minor_cov=1/2	new_cov=51/53	polymorphism_frequency=9.720e-01	polymorphism_score=0.5	prediction=consensus	ref_cov=1/2	total_cov=52/56
RA	321	.	NC_000913	3065449	0	G	A	bias_e_value=4219610	bias_p_value=0.909075	consensus_score=256.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.605092	major_base=A	major_cov=39/39	major_frequency=9.630e-01	minor_base=G	minor_cov=1/2	new_cov=39/39	polymorphism_frequency=9.630e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/2	total_cov=43/41
RA	322	.	NC_000913	3065861	0	G	A	bias_e_value=4508300	bias_p_value=0.97127	consensus_score=162.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.770074	major_base=A	major_cov=28/24	major_frequency=9.123e-01	minor_base=G	minor_cov=3/2	new_cov=28/24	polymorphism_frequency=9.123e-01	polymorphism_score=5.7	prediction=consensus	ref_cov=3/2	total_cov=31/26
RA	323	.	NC_000913	3089260	0	T	C	bias_e_value=4640300	bias_p_value=0.999709	consensus_score=215.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.975987	major_base=C	major_cov=31/32	major_frequency=9.844e-01	minor_base=T	minor_cov=0/1	new_cov=31/32	polymorphism_frequency=9.844e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=31/33
RA	324	.	NC_000913	3090968	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=165.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.99944	major_base=A	major_cov=19/32	major_frequency=9.107e-01	minor_base=G	minor_cov=2/3	new_cov=19/32	polymorphism_frequency=9.107e-01	polymorphism_score=3.5	prediction=consensus	ref_cov=2/3	total_cov=21/35
RA	325	.	NC_000913	3336411	0	G	A	bias_e_value=3598530	bias_p_value=0.775268	consensus_score=128.4	fisher_strand_p_value=0.432432	frequency=1	ks_quality_p_value=0.947381	major_base=A	major_cov=15/21	major_frequency=9.730e-01	minor_base=G	minor_cov=1/0	new_cov=15/21	polymorphism_frequency=9.730e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=17/21
RA	326	.	NC_000913	3336412	0	A	T	bias_e_value=3737320	bias_p_value=0.805171	consensus_score=120.8	fisher_strand_p_value=0.447368	frequency=1	ks_quality_p_value=0.994326	major_base=T	major_cov=16/21	major_frequency=9.737e-01	minor_base=A	minor_cov=1/0	new_cov=16/21	polymorphism_frequency=9.737e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=17/21
RA	327	.	NC_000913	3367944	0	G	A	bias_e_value=1429330	bias_p_value=0.307936	consensus_score=135.8	fisher_strand_p_value=0.325581	frequency=1	ks_quality_p_value=0.277988	major_base=A	major_cov=13/29	major_frequency=9.767e-01	minor_base=G	minor_cov=1/0	new_cov=13/29	polymorphism_frequency=9.767e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=1/0	total_cov=14/29
RA	328	.	NC_000913	3388041	0	T	G	consensus_score=157.0	frequency=1	major_base=G	major_cov=22/26	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/26	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/26
RA	329	.	NC_000913	3393679	0	A	T	bias_e_value=1.32324	bias_p_value=2.85081e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=96.7	fisher_strand_p_value=1.49918e-08	frequency=2.400e-01	ks_quality_p_value=1	major_base=A	major_cov=4/34	major_frequency=7.600e-01	minor_base=T	minor_cov=12/0	new_cov=12/0	polymorphism_frequency=2.400e-01	polymorphism_score=10.2	prediction=polymorphism	ref_cov=4/34	total_cov=16/34
RA	330	.	NC_000913	3399929	0	A	T	bias_e_value=4198580	bias_p_value=0.904544	consensus_score=308.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.596204	major_base=T	major_cov=50/38	major_frequency=9.778e-01	minor_base=A	minor_cov=1/1	new_cov=50/38	polymorphism_frequency=9.778e-01	polymorphism_score=-1.5	prediction=consensus	ref_cov=1/1	total_cov=51/39
RA	331	.	NC_000913	3436697	0	G	A	bias_e_value=3501640	bias_p_value=0.754395	consensus_score=244.0	fisher_strand_p_value=0.473684	frequency=1	ks_quality_p_value=0.817009	major_base=A	major_cov=35/40	major_frequency=9.868e-01	minor_base=G	minor_cov=1/0	new_cov=35/40	polymorphism_frequency=9.868e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=1/0	total_cov=36/40
RA	332	.	NC_000913	3449779	0	G	A	bias_e_value=801570	bias_p_value=0.172691	consensus_score=211.0	fisher_strand_p_value=0.239464	frequency=1	ks_quality_p_value=0.172169	major_base=A	major_cov=33/32	major_frequency=9.559e-01	minor_base=G	minor_cov=0/3	new_cov=33/32	polymorphism_frequency=9.559e-01	polymorphism_score=1.1	prediction=consensus	ref_cov=0/3	total_cov=33/35
RA	333	.	NC_000913	3468768	0	C	T	bias_e_value=4604610	bias_p_value=0.99202	consensus_score=188.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.876353	major_base=T	major_cov=28/26	major_frequency=9.818e-01	minor_base=C	minor_cov=1/0	new_cov=28/26	polymorphism_frequency=9.818e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=29/26
RA	334	.	NC_000913	3471111	0	C	G	bias_e_value=2136.3	bias_p_value=0.000460247	consensus_reject=FREQUENCY_CUTOFF	consensus_score=131.2	fisher_strand_p_value=4.15019e-05	frequency=2.090e-01	ks_quality_p_value=1	major_base=C	major_cov=31/22	major_frequency=7.910e-01	minor_base=G	minor_cov=0/14	new_cov=0/14	polymorphism_frequency=2.090e-01	polymorphism_score=12.4	prediction=polymorphism	ref_cov=31/22	total_cov=31/37
RA	335	.	NC_000913	3474425	0	T	C	bias_e_value=3604390	bias_p_value=0.776532	consensus_score=292.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.411097	major_base=C	major_cov=33/43	major_frequency=9.870e-01	minor_base=T	minor_cov=0/1	new_cov=33/43	polymorphism_frequency=9.870e-01	polymorphism_score=-4.5	prediction=consensus	ref_cov=0/1	total_cov=33/44
RA	336	.	NC_000913	3543877	0	G	A	bias_e_value=4612760	bias_p_value=0.993775	consensus_score=136.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.890515	major_base=A	major_cov=20/24	major_frequency=8.980e-01	minor_base=G	minor_cov=2/3	new_cov=20/24	polymorphism_frequency=8.980e-01	polymorphism_score=7.7	prediction=consensus	ref_cov=2/3	total_cov=22/27
RA	337	.	NC_000913	3548925	0	A	C	bias_e_value=3507800	bias_p_value=0.755722	consensus_reject=FREQUENCY_CUTOFF	consensus_score=73.2	fisher_strand_p_value=0.388405	frequency=3.214e-01	ks_quality_p_value=1	major_base=A	major_cov=23/15	major_frequency=6.786e-01	minor_base=C	minor_cov=8/10	new_cov=8/10	polymorphism_frequency=3.214e-01	polymorphism_score=11.1	prediction=polymorphism	ref_cov=23/15	total_cov=31/26
RA	338	.	NC_000913	3560455	1	.	G	bias_e_value=3807920	bias_p_value=0.820381	consensus_score=170.1	fisher_strand_p_value=0.479167	frequency=1	ks_quality_p_value=0.968589	major_base=G	major_cov=22/25	major_frequency=9.792e-01	minor_base=T	minor_cov=1/0	new_cov=22/25	polymorphism_frequency=9.792e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/0	total_cov=23/25
RA	339	.	NC_000913	3629921	0	C	T	bias_e_value=1916920	bias_p_value=0.412981	consensus_score=258.2	fisher_strand_p_value=0.466667	frequency=1	ks_quality_p_value=0.297526	major_base=T	major_cov=40/34	major_frequency=9.867e-01	minor_base=C	minor_cov=0/1	new_cov=40/34	polymorphism_frequency=9.867e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=0/1	total_cov=40/35
RA	340	.	NC_000913	3682515	0	C	T	consensus_score=126.9	frequency=1	major_base=T	major_cov=24/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=24/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=24/12
RA	341	.	NC_000913	3696909	0	G	A	bias_e_value=3021560	bias_p_value=0.650967	consensus_score=138.5	fisher_strand_p_value=0.498258	frequency=1	ks_quality_p_value=0.585251	major_base=A	major_cov=22/18	major_frequency=9.524e-01	minor_base=G	minor_cov=2/0	new_cov=22/18	polymorphism_frequency=9.524e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=2/0	total_cov=24/18
RA	342	.	NC_000913	3707947	0	C	A	bias_e_value=3857330	bias_p_value=0.831026	consensus_score=78.0	fisher_strand_p_value=0.478261	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=10/12	major_frequency=9.565e-01	minor_base=C	minor_cov=1/0	new_cov=10/12	polymorphism_frequency=9.565e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=11/12
RA	343	.	NC_000913	3725176	0	T	G	consensus_score=209.8	frequency=1	major_base=G	major_cov=27/38	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/38	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/38
RA	344	.	NC_000913	3761230	0	G	A	bias_e_value=3802070	bias_p_value=0.819119	consensus_score=270.7	fisher_strand_p_value=0.589756	frequency=1	ks_quality_p_value=0.784181	major_base=A	major_cov=35/43	major_frequency=9.630e-01	minor_base=G	minor_cov=2/1	new_cov=35/43	polymorphism_frequency=9.630e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=2/1	total_cov=37/44
RA	345	.	NC_000913	3771979	0	G	T	bias_e_value=2643600	bias_p_value=0.569539	consensus_score=125.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.231031	major_base=T	major_cov=21/18	major_frequency=9.286e-01	minor_base=G	minor_cov=2/1	new_cov=21/18	polymorphism_frequency=9.286e-01	polymorphism_score=5.0	prediction=consensus	ref_cov=2/1	total_cov=23/19
RA	346	.	NC_000913	3815883	1	.	C	bias_e_value=3190020	bias_p_value=0.687261	consensus_score=179.6	fisher_strand_p_value=0.414627	frequency=1	ks_quality_p_value=0.777388	major_base=C	major_cov=33/19	major_frequency=8.814e-01	minor_base=.	minor_cov=3/4	new_cov=33/19	polymorphism_frequency=8.814e-01	polymorphism_score=16.3	prediction=consensus	ref_cov=3/4	total_cov=36/23
RA	347	.	NC_000913	3823162	0	C	T	bias_e_value=3640530	bias_p_value=0.784318	consensus_score=251.0	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=0.979915	major_base=T	major_cov=40/29	major_frequency=9.857e-01	minor_base=G	minor_cov=0/1	new_cov=40/29	polymorphism_frequency=9.857e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=40/30
RA	348	.	NC_000913	3869637	0	C	A	bias_e_value=4629130	bias_p_value=0.997303	consensus_score=188.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.927458	major_base=A	major_cov=34/27	major_frequency=9.531e-01	minor_base=C	minor_cov=2/1	new_cov=34/27	polymorphism_frequency=9.531e-01	polymorphism_score=-2.3	prediction=consensus	ref_cov=2/1	total_cov=36/28
RA	349	.	NC_000913	3878536	0	G	A	bias_e_value=4641580	bias_p_value=0.999985	consensus_score=391.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.994523	major_base=A	major_cov=58/56	major_frequency=9.913e-01	minor_base=C	minor_cov=1/0	new_cov=58/56	polymorphism_frequency=9.913e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=59/56
RA	350	.	NC_000913	3883678	0	G	A	bias_e_value=3828670	bias_p_value=0.82485	consensus_score=312.1	fisher_strand_p_value=0.47191	frequency=1	ks_quality_p_value=0.995923	major_base=A	major_cov=41/47	major_frequency=9.888e-01	minor_base=C	minor_cov=1/0	new_cov=41/47	polymorphism_frequency=9.888e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=42/47
RA	351	.	NC_000913	3912074	0	G	A	bias_e_value=4641620	bias_p_value=0.999994	consensus_score=244.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.996485	major_base=A	major_cov=41/30	major_frequency=9.861e-01	minor_base=C	minor_cov=1/0	new_cov=41/30	polymorphism_frequency=9.861e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=43/30
RA	352	.	NC_000913	3914523	0	C	T	bias_e_value=4.28148	bias_p_value=9.22405e-07	consensus_reject=FREQUENCY_CUTOFF	consensus_score=138.5	fisher_strand_p_value=5.18963e-08	frequency=2.143e-01	ks_quality_p_value=1	major_base=C	major_cov=13/42	major_frequency=7.857e-01	minor_base=T	minor_cov=15/0	new_cov=15/0	polymorphism_frequency=2.143e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=13/42	total_cov=28/43
RA	353	.	NC_000913	3931069	0	C	T	consensus_score=114.3	frequency=1	major_base=T	major_cov=20/16	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=20/16	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=20/16
RA	354	.	NC_000913	3955304	0	C	T	bias_e_value=3925610	bias_p_value=0.845736	consensus_score=267.3	fisher_strand_p_value=0.501832	frequency=1	ks_quality_p_value=0.993946	major_base=T	major_cov=42/34	major_frequency=9.744e-01	minor_base=A	minor_cov=2/0	new_cov=42/34	polymorphism_frequency=9.744e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=45/34
RA	355	.	NC_000913	3988115	0	C	T	bias_e_value=4418580	bias_p_value=0.951941	consensus_score=219.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.706444	major_base=T	major_cov=29/36	major_frequency=9.559e-01	minor_base=C	minor_cov=1/2	new_cov=29/36	polymorphism_frequency=9.559e-01	polymorphism_score=1.3	prediction=consensus	ref_cov=1/2	total_cov=30/38
RA	356	.	NC_000913	3993531	0	T	C	consensus_score=219.1	frequency=1	major_base=C	major_cov=27/35	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=27/35	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=27/35
RA	357	.	NC_000913	3996049	0	T	A	bias_e_value=4247520	bias_p_value=0.915089	consensus_score=337.8	fisher_strand_p_value=0.617307	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=47/48	major_frequency=9.596e-01	minor_base=T	minor_cov=3/1	new_cov=47/48	polymorphism_frequency=9.596e-01	polymorphism_score=1.5	prediction=consensus	ref_cov=3/1	total_cov=51/49
RA	358	.	NC_000913	4011802	0	C	T	bias_e_value=3908410	bias_p_value=0.84203	consensus_score=257.4	fisher_strand_p_value=0.493506	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=39/37	major_frequency=9.870e-01	minor_base=G	minor_cov=0/1	new_cov=39/37	polymorphism_frequency=9.870e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=40/38
RA	359	.	NC_000913	4084903	0	T	G	bias_e_value=4641000	bias_p_value=0.999859	consensus_score=263.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.983272	major_base=G	major_cov=41/35	major_frequency=9.744e-01	minor_base=T	minor_cov=1/1	new_cov=41/35	polymorphism_frequency=9.744e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/1	total_cov=42/36
RA	360	.	NC_000913	4092703	0	A	G	bias_e_value=3356500	bias_p_value=0.723127	consensus_score=140.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.35546	major_base=G	major_cov=14/30	major_frequency=9.778e-01	minor_base=A	minor_cov=0/1	new_cov=14/30	polymorphism_frequency=9.778e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/1	total_cov=14/31
RA	361	.	NC_000913	4210041	0	G	A	bias_e_value=4639600	bias_p_value=0.999559	consensus_score=66.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.970444	major_base=A	major_cov=22/24	major_frequency=8.679e-01	minor_base=G	minor_cov=3/4	new_cov=22/24	polymorphism_frequency=8.679e-01	polymorphism_score=11.1	prediction=consensus	ref_cov=3/4	total_cov=26/28
RA	362	.	NC_000913	4272878	0	C	G	bias_e_value=4641650	bias_p_value=1	consensus_score=316.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=49/39	major_frequency=9.888e-01	minor_base=C	minor_cov=1/0	new_cov=49/39	polymorphism_frequency=9.888e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=50/39
RA	363	.	NC_000913	4276716	0	G	T	bias_e_value=2375510	bias_p_value=0.51178	consensus_score=176.1	fisher_strand_p_value=0.411765	frequency=1	ks_quality_p_value=0.47061	major_base=T	major_cov=30/20	major_frequency=9.804e-01	minor_base=G	minor_cov=0/1	new_cov=30/20	polymorphism_frequency=9.804e-01	polymorphism_score=-3.0	prediction=consensus	ref_cov=0/1	total_cov=30/21
RA	364	.	NC_000913	4296380	1	.	C	consensus_score=114.3	frequency=1	major_base=C	major_cov=17/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/20
RA	365	.	NC_000913	4296380	2	.	G	consensus_score=117.3	frequency=1	major_base=G	major_cov=17/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=17/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=17/20
RA	366	.	NC_000913	4337390	0	C	T	bias_e_value=345784	bias_p_value=0.0744958	consensus_score=126.5	fisher_strand_p_value=0.544534	frequency=1	ks_quality_p_value=0.0260263	major_base=T	major_cov=24/13	major_frequency=9.250e-01	minor_base=C	minor_cov=1/2	new_cov=24/13	polymorphism_frequency=9.250e-01	polymorphism_score=2.4	prediction=consensus	ref_cov=1/2	total_cov=25/15
RA	367	.	NC_000913	4338916	0	C	T	bias_e_value=2507890	bias_p_value=0.540301	consensus_score=299.9	fisher_strand_p_value=0.241573	frequency=1	ks_quality_p_value=0.876123	major_base=T	major_cov=45/42	major_frequency=9.775e-01	minor_base=C	minor_cov=0/2	new_cov=45/42	polymorphism_frequency=9.775e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=0/2	total_cov=45/44
RA	368	.	NC_000913	4349993	0	C	T	bias_e_value=1617850	bias_p_value=0.348551	consensus_score=214.4	fisher_strand_p_value=0.451613	frequency=1	ks_quality_p_value=0.239325	major_base=T	major_cov=27/34	major_frequency=9.839e-01	minor_base=C	minor_cov=1/0	new_cov=27/34	polymorphism_frequency=9.839e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=1/0	total_cov=28/34
RA	369	.	NC_000913	4375354	0	G	A	bias_e_value=3779960	bias_p_value=0.814356	consensus_score=161.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.456352	major_base=A	major_cov=24/25	major_frequency=9.800e-01	minor_base=G	minor_cov=1/0	new_cov=24/25	polymorphism_frequency=9.800e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=25/25
RA	370	.	NC_000913	4380367	0	C	T	bias_e_value=1549910	bias_p_value=0.333913	consensus_score=236.9	fisher_strand_p_value=0.105739	frequency=1	ks_quality_p_value=0.960789	major_base=T	major_cov=39/33	major_frequency=9.600e-01	minor_base=G	minor_cov=0/3	new_cov=39/33	polymorphism_frequency=9.600e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=40/36
RA	371	.	NC_000913	4425688	0	C	A	bias_e_value=4631290	bias_p_value=0.997767	consensus_score=199.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.933923	major_base=A	major_cov=21/38	major_frequency=9.833e-01	minor_base=C	minor_cov=0/1	new_cov=21/38	polymorphism_frequency=9.833e-01	polymorphism_score=-5.2	prediction=consensus	ref_cov=0/1	total_cov=21/39
RA	372	.	NC_000913	4425696	0	C	A	bias_e_value=3924470	bias_p_value=0.84549	consensus_score=194.9	fisher_strand_p_value=0.522404	frequency=1	ks_quality_p_value=0.954128	major_base=A	major_cov=23/36	major_frequency=9.672e-01	minor_base=C	minor_cov=0/2	new_cov=23/36	polymorphism_frequency=9.672e-01	polymorphism_score=-2.8	prediction=consensus	ref_cov=0/2	total_cov=23/38
RA	373	.	NC_000913	4436956	0	C	T	bias_e_value=3680820	bias_p_value=0.792998	consensus_score=345.9	fisher_strand_p_value=0.430108	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=53/39	major_frequency=9.892e-01	minor_base=G	minor_cov=0/1	new_cov=53/39	polymorphism_frequency=9.892e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=53/41
RA	374	.	NC_000913	4436957	0	C	T	bias_e_value=2286670	bias_p_value=0.492641	consensus_score=333.8	fisher_strand_p_value=0.182328	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=53/38	major_frequency=9.785e-01	minor_base=G	minor_cov=0/2	new_cov=53/38	polymorphism_frequency=9.785e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=53/41
RA	375	.	NC_000913	4532409	0	T	G	bias_e_value=4638010	bias_p_value=0.999215	consensus_score=293.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.960635	major_base=G	major_cov=47/33	major_frequency=9.639e-01	minor_base=T	minor_cov=2/1	new_cov=47/33	polymorphism_frequency=9.639e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=2/1	total_cov=49/34
MC	376	.	NC_000913	62379	88274	0	0	left_inside_cov=1	left_outside_cov=95	right_inside_cov=0	right_outside_cov=95
MC	377	.	NC_000913	257908	258683	767	0	left_inside_cov=0	left_outside_cov=54	right_inside_cov=0	right_outside_cov=54
MC	378	.	NC_000913	339199	358972	0	0	left_inside_cov=1	left_outside_cov=66	right_inside_cov=7	right_outside_cov=8
MC	379	.	NC_000913	372291	374020	0	0	left_inside_cov=7	left_outside_cov=8	right_inside_cov=7	right_outside_cov=8
MC	380	.	NC_000913	1196352	1211448	0	0	left_inside_cov=7	left_outside_cov=8	right_inside_cov=7	right_outside_cov=8
MC	381	.	NC_000913	1588756	1589725	0	0	left_inside_cov=0	left_outside_cov=31	right_inside_cov=0	right_outside_cov=31
MC	382	.	NC_000913	1704350	1704739	0	0	left_inside_cov=0	left_outside_cov=46	right_inside_cov=4	right_outside_cov=51
MC	383	.	NC_000913	1978495	1979270	0	767	left_inside_cov=0	left_outside_cov=39	right_inside_cov=1	right_outside_cov=41
MC	384	.	NC_000913	2238416	2238434	0	0	left_inside_cov=0	left_outside_cov=48	right_inside_cov=0	right_outside_cov=48
MC	385	.	NC_000913	3423870	3424426	363	188	left_inside_cov=7	left_outside_cov=8	right_inside_cov=7	right_outside_cov=9
MC	386	.	NC_000913	4540716	4551780	0	0	left_inside_cov=7	left_outside_cov=8	right_inside_cov=7	right_outside_cov=8
MC	387	.	NC_000913	4551789	4557116	0	0	left_inside_cov=7	left_outside_cov=8	right_inside_cov=7	right_outside_cov=8
MC	388	.	NC_000913	4557183	4597432	0	0	left_inside_cov=7	left_outside_cov=8	right_inside_cov=0	right_outside_cov=12
JC	389	.	NC_000913	1	1	NC_000913	4641652	-1	0	alignment_overlap=0	coverage_minus=10	coverage_plus=15	flanking_left=251	flanking_right=251	frequency=1	ignore=CIRCULAR_CHROMOSOME	junction_possible_overlap_registers=244	key=NC_000913__1__1__NC_000913__4641652__-1__0____251__251__0__0	max_left=249	max_left_minus=247	max_left_plus=249	max_min_left=118	max_min_left_minus=118	max_min_left_plus=86	max_min_right=124	max_min_right_minus=124	max_min_right_plus=110	max_pos_hash_score=490	max_right=250	max_right_minus=250	max_right_plus=229	neg_log10_pos_hash_p_value=1.2	new_junction_coverage=0.44	new_junction_read_count=25	polymorphism_frequency=1.000e+00	pos_hash_score=24	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=25
JC	390	.	NC_000913	62378	-1	NC_000913	88275	1	0	alignment_overlap=0	coverage_minus=47	coverage_plus=45	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__62378__-1__NC_000913__88275__1__0____251__251__0__0	max_left=249	max_left_minus=249	max_left_plus=248	max_min_left=123	max_min_left_minus=121	max_min_left_plus=123	max_min_right=125	max_min_right_minus=125	max_min_right_plus=123	max_pos_hash_score=490	max_right=244	max_right_minus=240	max_right_plus=244	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.65	new_junction_read_count=94	polymorphism_frequency=9.947e-01	pos_hash_score=80	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=92
JC	391	.	NC_000913	257907	-1	NC_000913	258684	1	0	alignment_overlap=8	coverage_minus=30	coverage_plus=22	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=236	key=NC_000913__257907__-1__NC_000913__258676__1__8____251__251__0__0	max_left=227	max_left_minus=196	max_left_plus=227	max_min_left=113	max_min_left_minus=111	max_min_left_plus=113	max_min_right=116	max_min_right_minus=116	max_min_right_plus=67	max_pos_hash_score=474	max_right=242	max_right_minus=241	max_right_plus=242	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.98	new_junction_read_count=54	polymorphism_frequency=1.000e+00	pos_hash_score=48	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=8	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=236	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=52
JC	392	.	NC_000913	258675	-1	NC_000913	1301058	-1	0	alignment_overlap=0	coverage_minus=20	coverage_plus=20	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__258675__-1__NC_000913__1301058__-1__0____251__251__1__0	max_left=246	max_left_minus=226	max_left_plus=246	max_min_left=106	max_min_left_minus=106	max_min_left_plus=33	max_min_right=122	max_min_right_minus=122	max_min_right_plus=120	max_pos_hash_score=490	max_right=248	max_right_minus=241	max_right_plus=248	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.72	new_junction_read_count=41	polymorphism_frequency=1.000e+00	pos_hash_score=40	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=40
JC	393	.	NC_000913	288695	1	NC_000913	3722075	-1	0	alignment_overlap=0	coverage_minus=17	coverage_plus=22	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__288695__1__NC_000913__3722075__-1__0____251__251__0__0	max_left=241	max_left_minus=237	max_left_plus=241	max_min_left=125	max_min_left_minus=125	max_min_left_plus=125	max_min_right=124	max_min_right_minus=124	max_min_right_plus=121	max_pos_hash_score=490	max_right=249	max_right_minus=248	max_right_plus=249	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.70	new_junction_read_count=40	polymorphism_frequency=9.518e-01	pos_hash_score=38	prediction=consensus	read_count_offset=3	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.04	side_1_overlap=0	side_1_possible_overlap_registers=241	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=0	total_non_overlap_reads=39
JC	394	.	NC_000913	288697	-1	NC_000913	3720633	1	0	alignment_overlap=0	coverage_minus=20	coverage_plus=60	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__288697__-1__NC_000913__3720633__1__0____251__251__0__0	max_left=250	max_left_minus=225	max_left_plus=250	max_min_left=121	max_min_left_minus=121	max_min_left_plus=109	max_min_right=122	max_min_right_minus=107	max_min_right_plus=122	max_pos_hash_score=490	max_right=248	max_right_minus=248	max_right_plus=244	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.42	new_junction_read_count=81	polymorphism_frequency=9.756e-01	pos_hash_score=67	prediction=consensus	read_count_offset=3	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.04	side_1_overlap=0	side_1_possible_overlap_registers=241	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=0	total_non_overlap_reads=80
JC	395	.	NC_000913	339198	-1	NC_000913	375418	1	0	alignment_overlap=4	coverage_minus=25	coverage_plus=37	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=240	key=NC_000913__339198__-1__NC_000913__375414__1__4____251__251__0__0	max_left=246	max_left_minus=237	max_left_plus=246	max_min_left=118	max_min_left_minus=117	max_min_left_plus=118	max_min_right=120	max_min_right_minus=112	max_min_right_plus=120	max_pos_hash_score=482	max_right=236	max_right_minus=229	max_right_plus=236	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.16	new_junction_read_count=65	polymorphism_frequency=9.560e-01	pos_hash_score=56	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=4	side_1_possible_overlap_registers=244	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.09	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=5	side_2_redundant=0	total_non_overlap_reads=62
JC	396	.	NC_000913	366180	-1	NC_000913	366274	1	0	alignment_overlap=0	coverage_minus=25	coverage_plus=28	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__366180__-1__NC_000913__366274__1__0____251__251__0__0	max_left=244	max_left_minus=244	max_left_plus=244	max_min_left=123	max_min_left_minus=110	max_min_left_plus=123	max_min_right=123	max_min_right_minus=123	max_min_right_plus=106	max_pos_hash_score=490	max_right=233	max_right_minus=231	max_right_plus=233	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.97	new_junction_read_count=55	polymorphism_frequency=9.402e-01	pos_hash_score=49	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.04	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.09	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=5	side_2_redundant=0	total_non_overlap_reads=53
JC	397	.	NC_000913	381260	1	NC_000913	789812	1	0	alignment_overlap=0	coverage_minus=21	coverage_plus=23	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__381260__1__NC_000913__789812__1__0____251__251__1__0	max_left=245	max_left_minus=245	max_left_plus=242	max_min_left=121	max_min_left_minus=102	max_min_left_plus=121	max_min_right=124	max_min_right_minus=124	max_min_right_plus=108	max_pos_hash_score=490	max_right=246	max_right_minus=235	max_right_plus=246	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.77	new_junction_read_count=44	polymorphism_frequency=1.000e+00	pos_hash_score=40	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=44
JC	398	.	NC_000913	381260	1	NC_000913	1093485	-1	0	alignment_overlap=2	coverage_minus=14	coverage_plus=21	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__381260__1__NC_000913__1093487__-1__2____251__251__1__0	max_left=246	max_left_minus=246	max_left_plus=240	max_min_left=124	max_min_left_minus=102	max_min_left_plus=124	max_min_right=119	max_min_right_minus=110	max_min_right_plus=119	max_pos_hash_score=486	max_right=243	max_right_minus=243	max_right_plus=213	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.62	new_junction_read_count=35	polymorphism_frequency=9.717e-01	pos_hash_score=34	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=237	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=35
JC	399	.	NC_000913	382590	-1	NC_000913	789816	-1	0	alignment_overlap=2	coverage_minus=31	coverage_plus=28	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__382590__-1__NC_000913__789818__-1__2____251__251__1__0	max_left=244	max_left_minus=244	max_left_plus=242	max_min_left=119	max_min_left_minus=119	max_min_left_plus=112	max_min_right=124	max_min_right_minus=108	max_min_right_plus=124	max_pos_hash_score=486	max_right=248	max_right_minus=248	max_right_plus=239	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.10	new_junction_read_count=62	polymorphism_frequency=1.000e+00	pos_hash_score=55	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=237	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=59
JC	400	.	NC_000913	1093481	1	NC_000913	1651548	-1	0	alignment_overlap=0	coverage_minus=22	coverage_plus=10	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1093481__1__NC_000913__1651548__-1__0____251__251__0__1	max_left=211	max_left_minus=192	max_left_plus=211	max_min_left=121	max_min_left_minus=117	max_min_left_plus=121	max_min_right=123	max_min_right_minus=123	max_min_right_plus=119	max_pos_hash_score=490	max_right=248	max_right_minus=248	max_right_plus=233	neg_log10_pos_hash_p_value=0.8	new_junction_coverage=0.56	new_junction_read_count=32	polymorphism_frequency=9.691e-01	pos_hash_score=30	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=32
JC	401	.	NC_000913	1299498	-1	NC_000913	1300698	1	0	alignment_overlap=4	coverage_minus=23	coverage_plus=15	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=240	key=NC_000913__1299498__-1__NC_000913__1300694__1__4____251__251__0__0	max_left=233	max_left_minus=206	max_left_plus=233	max_min_left=115	max_min_left_minus=115	max_min_left_plus=97	max_min_right=120	max_min_right_minus=120	max_min_right_plus=112	max_pos_hash_score=482	max_right=246	max_right_minus=246	max_right_plus=203	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.71	new_junction_read_count=40	polymorphism_frequency=1.000e+00	pos_hash_score=38	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=4	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=38
JC	402	.	NC_000913	1301050	1	NC_000913	1978503	1	0	alignment_overlap=0	coverage_minus=36	coverage_plus=27	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1301050__1__NC_000913__1978503__1__0____251__251__0__1	max_left=249	max_left_minus=249	max_left_plus=235	max_min_left=123	max_min_left_minus=123	max_min_left_plus=114	max_min_right=112	max_min_right_minus=108	max_min_right_plus=112	max_pos_hash_score=490	max_right=246	max_right_minus=246	max_right_plus=245	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.12	new_junction_read_count=64	polymorphism_frequency=1.000e+00	pos_hash_score=61	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=235	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=63
JC	403	.	NC_000913	1396044	1	NC_000913	1434346	-1	0	alignment_overlap=0	coverage_minus=14	coverage_plus=23	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1396044__1__NC_000913__1434346__-1__0____251__251__1__0	max_left=241	max_left_minus=241	max_left_plus=240	max_min_left=124	max_min_left_minus=122	max_min_left_plus=124	max_min_right=125	max_min_right_minus=125	max_min_right_plus=118	max_pos_hash_score=490	max_right=246	max_right_minus=246	max_right_plus=241	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.65	new_junction_read_count=37	polymorphism_frequency=9.238e-01	pos_hash_score=35	prediction=consensus	read_count_offset=4	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=37
JC	404	.	NC_000913	1397238	-1	NC_000913	1434343	1	0	alignment_overlap=0	coverage_minus=13	coverage_plus=21	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1397238__-1__NC_000913__1434343__1__0____251__251__1__0	max_left=245	max_left_minus=238	max_left_plus=245	max_min_left=91	max_min_left_minus=91	max_min_left_plus=76	max_min_right=118	max_min_right_minus=85	max_min_right_plus=118	max_pos_hash_score=490	max_right=245	max_right_minus=214	max_right_plus=245	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.61	new_junction_read_count=35	polymorphism_frequency=9.198e-01	pos_hash_score=33	prediction=consensus	read_count_offset=4	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=34
JC	405	.	NC_000913	1397238	-1	NC_000913	1978494	-1	0	alignment_overlap=0	coverage_minus=20	coverage_plus=16	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1397238__-1__NC_000913__1978494__-1__0____251__251__1__0	max_left=216	max_left_minus=216	max_left_plus=201	max_min_left=114	max_min_left_minus=112	max_min_left_plus=114	max_min_right=121	max_min_right_minus=121	max_min_right_plus=112	max_pos_hash_score=490	max_right=236	max_right_minus=223	max_right_plus=236	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.68	new_junction_read_count=39	polymorphism_frequency=1.000e+00	pos_hash_score=35	prediction=consensus	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=36
JC	406	.	NC_000913	1588755	-1	NC_000913	1589726	1	0	alignment_overlap=0	coverage_minus=14	coverage_plus=17	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1588755__-1__NC_000913__1589726__1__0____251__251__0__0	max_left=234	max_left_minus=231	max_left_plus=234	max_min_left=73	max_min_left_minus=73	max_min_left_plus=56	max_min_right=124	max_min_right_minus=82	max_min_right_plus=124	max_pos_hash_score=490	max_right=240	max_right_minus=233	max_right_plus=240	neg_log10_pos_hash_p_value=0.8	new_junction_coverage=0.54	new_junction_read_count=31	polymorphism_frequency=1.000e+00	pos_hash_score=29	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=31
JC	407	.	NC_000913	1651548	-1	NC_000913	1651855	-1	0	alignment_overlap=0	coverage_minus=12	coverage_plus=21	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1651548__-1__NC_000913__1651855__-1__0____251__251__1__0	max_left=244	max_left_minus=215	max_left_plus=244	max_min_left=121	max_min_left_minus=81	max_min_left_plus=121	max_min_right=116	max_min_right_minus=80	max_min_right_plus=116	max_pos_hash_score=490	max_right=242	max_right_minus=241	max_right_plus=242	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.58	new_junction_read_count=33	polymorphism_frequency=1.000e+00	pos_hash_score=31	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=33
JC	408	.	NC_000913	1651851	1	NC_000913	2070271	-1	0	alignment_overlap=0	coverage_minus=20	coverage_plus=16	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1651851__1__NC_000913__2070271__-1__0____251__251__0__1	max_left=243	max_left_minus=243	max_left_plus=220	max_min_left=90	max_min_left_minus=90	max_min_left_plus=62	max_min_right=124	max_min_right_minus=121	max_min_right_plus=124	max_pos_hash_score=490	max_right=248	max_right_minus=245	max_right_plus=248	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.65	new_junction_read_count=37	polymorphism_frequency=1.000e+00	pos_hash_score=34	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=36
JC	409	.	NC_000913	1704349	-1	NC_000913	1704740	1	0	alignment_overlap=2	coverage_minus=17	coverage_plus=25	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__1704349__-1__NC_000913__1704738__1__2____251__251__0__0	max_left=221	max_left_minus=221	max_left_plus=196	max_min_left=116	max_min_left_minus=98	max_min_left_plus=116	max_min_right=121	max_min_right_minus=104	max_min_right_plus=121	max_pos_hash_score=486	max_right=235	max_right_minus=233	max_right_plus=235	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.81	new_junction_read_count=46	polymorphism_frequency=9.684e-01	pos_hash_score=38	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=2	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=242	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=42
JC	410	.	NC_000913	1977430	1	NC_000913	1977443	-1	0	alignment_overlap=8	coverage_minus=22	coverage_plus=13	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=236	key=NC_000913__1977430__1__NC_000913__1977451__-1__8____251__251__0__0	max_left=237	max_left_minus=228	max_left_plus=237	max_min_left=96	max_min_left_minus=58	max_min_left_plus=96	max_min_right=119	max_min_right_minus=119	max_min_right_plus=103	max_pos_hash_score=474	max_right=241	max_right_minus=241	max_right_plus=178	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.65	new_junction_read_count=36	polymorphism_frequency=9.133e-01	pos_hash_score=33	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.09	side_1_overlap=8	side_1_possible_overlap_registers=244	side_1_read_count=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=236	side_2_read_count=2	side_2_redundant=0	total_non_overlap_reads=35
JC	411	.	NC_000913	1978503	1	NC_000913	4069379	1	0	alignment_overlap=0	coverage_minus=22	coverage_plus=36	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1978503__1__NC_000913__4069379__1__0____251__251__1__0	max_left=239	max_left_minus=232	max_left_plus=239	max_min_left=124	max_min_left_minus=99	max_min_left_plus=124	max_min_right=121	max_min_right_minus=115	max_min_right_plus=121	max_pos_hash_score=490	max_right=245	max_right_minus=241	max_right_plus=245	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.02	new_junction_read_count=58	polymorphism_frequency=9.332e-01	pos_hash_score=56	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.07	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=58
JC	412	.	NC_000913	1979270	-1	NC_000913	2382515	-1	0	alignment_overlap=0	coverage_minus=37	coverage_plus=29	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1979270__-1__NC_000913__2382515__-1__0____251__251__1__0	max_left=245	max_left_minus=243	max_left_plus=245	max_min_left=119	max_min_left_minus=119	max_min_left_plus=116	max_min_right=124	max_min_right_minus=124	max_min_right_plus=119	max_pos_hash_score=490	max_right=250	max_right_minus=243	max_right_plus=250	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.18	new_junction_read_count=67	polymorphism_frequency=9.699e-01	pos_hash_score=65	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=2	side_2_redundant=0	total_non_overlap_reads=66
JC	413	.	NC_000913	1979270	-1	NC_000913	4289456	-1	0	alignment_overlap=0	coverage_minus=37	coverage_plus=36	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1979270__-1__NC_000913__4289456__-1__0____251__251__1__0	max_left=248	max_left_minus=247	max_left_plus=248	max_min_left=124	max_min_left_minus=112	max_min_left_plus=124	max_min_right=123	max_min_right_minus=120	max_min_right_plus=123	max_pos_hash_score=490	max_right=249	max_right_minus=249	max_right_plus=246	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.32	new_junction_read_count=75	polymorphism_frequency=9.863e-01	pos_hash_score=68	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=73
JC	414	.	NC_000913	1979271	1	NC_000913	2102947	-1	0	alignment_overlap=0	coverage_minus=27	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__1979271__1__NC_000913__2102947__-1__0____251__251__0__1	max_left=235	max_left_minus=235	max_left_plus=228	max_min_left=118	max_min_left_minus=116	max_min_left_plus=118	max_min_right=124	max_min_right_minus=123	max_min_right_plus=124	max_pos_hash_score=490	max_right=246	max_right_minus=246	max_right_plus=239	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.70	new_junction_read_count=40	polymorphism_frequency=9.756e-01	pos_hash_score=35	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=38
JC	415	.	NC_000913	2238415	-1	NC_000913	2238435	1	0	alignment_overlap=0	coverage_minus=21	coverage_plus=26	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2238415__-1__NC_000913__2238435__1__0____251__251__0__0	max_left=234	max_left_minus=234	max_left_plus=229	max_min_left=125	max_min_left_minus=125	max_min_left_plus=114	max_min_right=112	max_min_right_minus=106	max_min_right_plus=112	max_pos_hash_score=490	max_right=239	max_right_minus=239	max_right_plus=238	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.84	new_junction_read_count=48	polymorphism_frequency=1.000e+00	pos_hash_score=41	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=47
JC	416	.	NC_000913	2290113	-1	NC_000913	2904758	1	0	alignment_overlap=0	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=1.071e-01	junction_possible_overlap_registers=244	key=NC_000913__2290113__-1__NC_000913__2904758__1__0____251__251__1__0	max_left=170	max_left_minus=170	max_left_plus=170	max_min_left=110	max_min_left_minus=110	max_min_left_plus=0	max_min_right=50	max_min_right_minus=50	max_min_right_plus=50	max_pos_hash_score=490	max_right=140	max_right_minus=140	max_right_plus=50	neg_log10_pos_hash_p_value=4.6	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=1.071e-01	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.44	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=25	side_2_redundant=0	total_non_overlap_reads=3
JC	417	.	NC_000913	2382507	1	NC_000913	3584195	-1	0	alignment_overlap=0	coverage_minus=15	coverage_plus=16	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2382507__1__NC_000913__3584195__-1__0____251__251__0__1	max_left=238	max_left_minus=235	max_left_plus=238	max_min_left=123	max_min_left_minus=108	max_min_left_plus=123	max_min_right=124	max_min_right_minus=124	max_min_right_plus=116	max_pos_hash_score=490	max_right=233	max_right_minus=211	max_right_plus=233	neg_log10_pos_hash_p_value=1.0	new_junction_coverage=0.54	new_junction_read_count=31	polymorphism_frequency=9.372e-01	pos_hash_score=27	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.04	side_1_overlap=0	side_1_possible_overlap_registers=235	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=31
JC	418	.	NC_000913	2805802	1	NC_000913	3584195	-1	0	alignment_overlap=0	coverage_minus=51	coverage_plus=36	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2805802__1__NC_000913__3584195__-1__0____251__251__0__1	max_left=249	max_left_minus=249	max_left_plus=249	max_min_left=121	max_min_left_minus=120	max_min_left_plus=121	max_min_right=124	max_min_right_minus=124	max_min_right_plus=109	max_pos_hash_score=490	max_right=248	max_right_minus=248	max_right_plus=233	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.56	new_junction_read_count=89	polymorphism_frequency=9.885e-01	pos_hash_score=80	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=235	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=87
JC	419	.	NC_000913	2805810	-1	NC_000913	3583428	1	0	alignment_overlap=0	coverage_minus=26	coverage_plus=24	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2805810__-1__NC_000913__3583428__1__0____251__251__0__1	max_left=245	max_left_minus=221	max_left_plus=245	max_min_left=115	max_min_left_minus=107	max_min_left_plus=115	max_min_right=121	max_min_right_minus=121	max_min_right_plus=91	max_pos_hash_score=490	max_right=244	max_right_minus=237	max_right_plus=244	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.88	new_junction_read_count=50	polymorphism_frequency=9.797e-01	pos_hash_score=50	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=235	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=50
JC	420	.	NC_000913	2913392	1	NC_000913	2997691	-1	0	alignment_overlap=0	coverage_minus=28	coverage_plus=29	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2913392__1__NC_000913__2997691__-1__0____251__251__0__1	max_left=250	max_left_minus=250	max_left_plus=249	max_min_left=122	max_min_left_minus=122	max_min_left_plus=115	max_min_right=121	max_min_right_minus=121	max_min_right_plus=109	max_pos_hash_score=490	max_right=248	max_right_minus=248	max_right_plus=240	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.00	new_junction_read_count=57	polymorphism_frequency=9.331e-01	pos_hash_score=52	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.07	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=57
JC	421	.	NC_000913	2913396	-1	NC_000913	2996361	1	0	alignment_overlap=0	coverage_minus=46	coverage_plus=20	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__2913396__-1__NC_000913__2996361__1__0____251__251__0__1	max_left=250	max_left_minus=250	max_left_plus=248	max_min_left=122	max_min_left_minus=122	max_min_left_plus=107	max_min_right=117	max_min_right_minus=116	max_min_right_plus=117	max_pos_hash_score=490	max_right=244	max_right_minus=244	max_right_plus=236	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.18	new_junction_read_count=67	polymorphism_frequency=9.426e-01	pos_hash_score=57	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.07	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=66
JC	422	.	NC_000913	2942764	-1	NC_000913	2942773	1	0	alignment_overlap=6	coverage_minus=15	coverage_plus=18	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=238	key=NC_000913__2942764__-1__NC_000913__2942767__1__6____251__251__0__0	max_left=232	max_left_minus=232	max_left_plus=223	max_min_left=114	max_min_left_minus=103	max_min_left_plus=114	max_min_right=61	max_min_right_minus=61	max_min_right_plus=54	max_pos_hash_score=478	max_right=243	max_right_minus=243	max_right_plus=238	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.61	new_junction_read_count=34	polymorphism_frequency=9.198e-01	pos_hash_score=31	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.05	side_1_overlap=6	side_1_possible_overlap_registers=244	side_1_read_count=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.05	side_2_overlap=0	side_2_possible_overlap_registers=238	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=33
JC	423	.	NC_000913	3078723	1	NC_000913	3131340	-1	0	alignment_overlap=0	coverage_minus=23	coverage_plus=10	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3078723__1__NC_000913__3131340__-1__0____251__251__0__1	max_left=248	max_left_minus=248	max_left_plus=224	max_min_left=119	max_min_left_minus=119	max_min_left_plus=113	max_min_right=120	max_min_right_minus=119	max_min_right_plus=120	max_pos_hash_score=490	max_right=246	max_right_minus=246	max_right_plus=227	neg_log10_pos_hash_p_value=0.7	new_junction_coverage=0.60	new_junction_read_count=34	polymorphism_frequency=9.710e-01	pos_hash_score=32	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=240	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=33
JC	424	.	NC_000913	3078726	-1	NC_000913	3130146	1	0	alignment_overlap=1	coverage_minus=24	coverage_plus=25	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__3078727__-1__NC_000913__3130146__1__1____251__251__0__1	max_left=247	max_left_minus=247	max_left_plus=244	max_min_left=112	max_min_left_minus=98	max_min_left_plus=112	max_min_right=124	max_min_right_minus=115	max_min_right_plus=124	max_pos_hash_score=488	max_right=247	max_right_minus=241	max_right_plus=247	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.86	new_junction_read_count=49	polymorphism_frequency=9.797e-01	pos_hash_score=47	prediction=consensus	read_count_offset=4	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.02	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=49
JC	425	.	NC_000913	3451295	-1	NC_000913	3451798	1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=3.769e-02	junction_possible_overlap_registers=234	key=NC_000913__3451295__-1__NC_000913__3451788__1__10____251__251__0__0	max_left=56	max_left_minus=56	max_left_plus=56	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=22	max_min_right_minus=22	max_min_right_plus=22	max_pos_hash_score=470	max_right=240	max_right_minus=22	max_right_plus=240	neg_log10_pos_hash_p_value=4.5	new_junction_coverage=0.05	new_junction_read_count=3	polymorphism_frequency=3.769e-02	pos_hash_score=3	prediction=polymorphism	reject=COVERAGE_EVENNESS_SKEW,FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.19	side_1_overlap=10	side_1_possible_overlap_registers=244	side_1_read_count=68	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.61	side_2_overlap=0	side_2_possible_overlap_registers=234	side_2_read_count=88	side_2_redundant=0	total_non_overlap_reads=3
JC	426	.	NC_000913	3583428	1	NC_000913	4069387	-1	0	alignment_overlap=0	coverage_minus=23	coverage_plus=27	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3583428__1__NC_000913__4069387__-1__0____251__251__1__0	max_left=244	max_left_minus=236	max_left_plus=244	max_min_left=116	max_min_left_minus=115	max_min_left_plus=116	max_min_right=124	max_min_right_minus=107	max_min_right_plus=124	max_pos_hash_score=490	max_right=247	max_right_minus=239	max_right_plus=247	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.91	new_junction_read_count=52	polymorphism_frequency=9.260e-01	pos_hash_score=46	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.07	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=4	side_2_redundant=0	total_non_overlap_reads=50
JC	427	.	NC_000913	3584195	-1	NC_000913	4289448	1	0	alignment_overlap=0	coverage_minus=39	coverage_plus=42	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3584195__-1__NC_000913__4289448__1__0____251__251__1__0	max_left=246	max_left_minus=240	max_left_plus=246	max_min_left=122	max_min_left_minus=122	max_min_left_plus=120	max_min_right=117	max_min_right_minus=117	max_min_right_plus=102	max_pos_hash_score=490	max_right=249	max_right_minus=244	max_right_plus=249	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.44	new_junction_read_count=82	polymorphism_frequency=9.875e-01	pos_hash_score=70	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=81
JC	428	.	NC_000913	3720633	1	NC_000913	4452703	-1	0	alignment_overlap=2	coverage_minus=49	coverage_plus=45	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__3720633__1__NC_000913__4452705__-1__2____251__251__0__0	max_left=248	max_left_minus=248	max_left_plus=247	max_min_left=123	max_min_left_minus=123	max_min_left_plus=123	max_min_right=115	max_min_right_minus=115	max_min_right_plus=109	max_pos_hash_score=486	max_right=242	max_right_minus=242	max_right_plus=238	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.70	new_junction_read_count=96	polymorphism_frequency=9.896e-01	pos_hash_score=76	prediction=consensus	read_count_offset=3	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=94
JC	429	.	NC_000913	3722075	-1	NC_000913	4452701	1	0	alignment_overlap=1	coverage_minus=38	coverage_plus=24	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__3722076__-1__NC_000913__4452701__1__1____251__251__0__0	max_left=248	max_left_minus=243	max_left_plus=248	max_min_left=123	max_min_left_minus=123	max_min_left_plus=123	max_min_right=118	max_min_right_minus=118	max_min_right_plus=116	max_pos_hash_score=488	max_right=232	max_right_minus=232	max_right_plus=208	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=1.13	new_junction_read_count=64	polymorphism_frequency=9.845e-01	pos_hash_score=52	prediction=consensus	read_count_offset=3	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=1	side_2_possible_overlap_registers=241	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=62
JC	430	.	NC_000913	3822646	1	NC_000913	3822651	-1	0	alignment_overlap=0	coverage_minus=40	coverage_plus=34	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3822646__1__NC_000913__3822651__-1__0____251__251__0__0	max_left=235	max_left_minus=235	max_left_plus=224	max_min_left=125	max_min_left_minus=125	max_min_left_plus=122	max_min_right=122	max_min_right_minus=122	max_min_right_plus=110	max_pos_hash_score=490	max_right=244	max_right_minus=240	max_right_plus=244	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.30	new_junction_read_count=74	polymorphism_frequency=9.610e-01	pos_hash_score=70	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.09	side_1_overlap=0	side_1_possible_overlap_registers=244	side_1_read_count=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.02	side_2_overlap=0	side_2_possible_overlap_registers=244	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=74
JC	431	.	NC_000913	3938983	1	NC_000913	4498181	1	0	alignment_overlap=0	coverage_minus=22	coverage_plus=27	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3938983__1__NC_000913__4498181__1__0____251__251__0__1	max_left=245	max_left_minus=239	max_left_plus=245	max_min_left=112	max_min_left_minus=91	max_min_left_plus=112	max_min_right=113	max_min_right_minus=84	max_min_right_plus=113	max_pos_hash_score=490	max_right=243	max_right_minus=242	max_right_plus=243	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.88	new_junction_read_count=50	polymorphism_frequency=1.000e+00	pos_hash_score=45	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=49
JC	432	.	NC_000913	3938987	-1	NC_000913	4499511	-1	0	alignment_overlap=0	coverage_minus=7	coverage_plus=32	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=244	key=NC_000913__3938987__-1__NC_000913__4499511__-1__0____251__251__0__1	max_left=246	max_left_minus=89	max_left_plus=246	max_min_left=125	max_min_left_minus=89	max_min_left_plus=125	max_min_right=113	max_min_right_minus=0	max_min_right_plus=113	max_pos_hash_score=490	max_right=250	max_right_minus=250	max_right_plus=244	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.72	new_junction_read_count=41	polymorphism_frequency=1.000e+00	pos_hash_score=37	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=239	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=39
UN	433	.	NC_000913	15576	16536
UN	434	.	NC_000913	20022	20355
UN	435	.	NC_000913	20362	20362
UN	436	.	NC_000913	62379	68928
UN	437	.	NC_000913	68930	68930
UN	438	.	NC_000913	68932	68932
UN	439	.	NC_000913	68937	82087
UN	440	.	NC_000913	82114	82115
UN	441	.	NC_000913	82117	82117
UN	442	.	NC_000913	82122	82122
UN	443	.	NC_000913	82130	82131
UN	444	.	NC_000913	82133	82133
UN	445	.	NC_000913	82135	82135
UN	446	.	NC_000913	82139	82139
UN	447	.	NC_000913	82153	82153
UN	448	.	NC_000913	82177	82178
UN	449	.	NC_000913	82185	82185
UN	450	.	NC_000913	82189	82190
UN	451	.	NC_000913	82193	82193
UN	452	.	NC_000913	82198	82201
UN	453	.	NC_000913	82203	88274
UN	454	.	NC_000913	223919	223919
UN	455	.	NC_000913	223957	223958
UN	456	.	NC_000913	223960	224540
UN	457	.	NC_000913	224542	224543
UN	458	.	NC_000913	224547	224547
UN	459	.	NC_000913	224549	224549
UN	460	.	NC_000913	225125	225376
UN	461	.	NC_000913	225379	225379
UN	462	.	NC_000913	225383	225383
UN	463	.	NC_000913	225386	225388
UN	464	.	NC_000913	227217	228452
UN	465	.	NC_000913	257908	258683
UN	466	.	NC_000913	270727	270727
UN	467	.	NC_000913	270731	270732
UN	468	.	NC_000913	270735	271083
UN	469	.	NC_000913	274180	274927
UN	470	.	NC_000913	279394	279699
UN	471	.	NC_000913	279701	279704
UN	472	.	NC_000913	290856	291170
UN	473	.	NC_000913	315447	315447
UN	474	.	NC_000913	315450	316260
UN	475	.	NC_000913	316263	316263
UN	476	.	NC_000913	316271	316272
UN	477	.	NC_000913	339199	339716
UN	478	.	NC_000913	339719	339719
UN	479	.	NC_000913	339723	339723
UN	480	.	NC_000913	339727	339730
UN	481	.	NC_000913	339741	339741
UN	482	.	NC_000913	339743	339743
UN	483	.	NC_000913	339745	339746
UN	484	.	NC_000913	339753	339753
UN	485	.	NC_000913	339778	339778
UN	486	.	NC_000913	339781	339781
UN	487	.	NC_000913	339784	339784
UN	488	.	NC_000913	339786	339786
UN	489	.	NC_000913	339802	339818
UN	490	.	NC_000913	339820	342170
UN	491	.	NC_000913	342175	342175
UN	492	.	NC_000913	342178	342178
UN	493	.	NC_000913	342181	342183
UN	494	.	NC_000913	342186	342187
UN	495	.	NC_000913	342189	342190
UN	496	.	NC_000913	342192	342192
UN	497	.	NC_000913	342194	342194
UN	498	.	NC_000913	342196	342196
UN	499	.	NC_000913	342235	342236
UN	500	.	NC_000913	342241	342241
UN	501	.	NC_000913	342247	342248
UN	502	.	NC_000913	342254	342254
UN	503	.	NC_000913	342260	342260
UN	504	.	NC_000913	342267	342267
UN	505	.	NC_000913	342271	342271
UN	506	.	NC_000913	342274	342274
UN	507	.	NC_000913	342276	342276
UN	508	.	NC_000913	342287	342287
UN	509	.	NC_000913	342291	342291
UN	510	.	NC_000913	342314	342316
UN	511	.	NC_000913	342338	342338
UN	512	.	NC_000913	342341	342342
UN	513	.	NC_000913	342348	342348
UN	514	.	NC_000913	342350	348082
UN	515	.	NC_000913	348141	348141
UN	516	.	NC_000913	348173	349058
UN	517	.	NC_000913	349074	349074
UN	518	.	NC_000913	349091	349226
UN	519	.	NC_000913	349229	349231
UN	520	.	NC_000913	349233	349238
UN	521	.	NC_000913	349240	349241
UN	522	.	NC_000913	349244	349244
UN	523	.	NC_000913	349246	349247
UN	524	.	NC_000913	349249	349257
UN	525	.	NC_000913	349259	349260
UN	526	.	NC_000913	349264	350633
UN	527	.	NC_000913	350638	350638
UN	528	.	NC_000913	350645	350646
UN	529	.	NC_000913	350653	350653
UN	530	.	NC_000913	350669	350669
UN	531	.	NC_000913	350671	350671
UN	532	.	NC_000913	350716	351693
UN	533	.	NC_000913	351695	351695
UN	534	.	NC_000913	351698	351893
UN	535	.	NC_000913	351896	351896
UN	536	.	NC_000913	351905	352022
UN	537	.	NC_000913	352054	352061
UN	538	.	NC_000913	352070	352070
UN	539	.	NC_000913	352073	352074
UN	540	.	NC_000913	352079	352079
UN	541	.	NC_000913	352116	356517
UN	542	.	NC_000913	356523	356523
UN	543	.	NC_000913	356526	356526
UN	544	.	NC_000913	356531	356531
UN	545	.	NC_000913	356537	356537
UN	546	.	NC_000913	356547	356547
UN	547	.	NC_000913	356553	356553
UN	548	.	NC_000913	356556	356556
UN	549	.	NC_000913	356625	356625
UN	550	.	NC_000913	356628	356628
UN	551	.	NC_000913	356634	356634
UN	552	.	NC_000913	356643	356644
UN	553	.	NC_000913	356651	356654
UN	554	.	NC_000913	356660	356660
UN	555	.	NC_000913	356664	356665
UN	556	.	NC_000913	356668	356668
UN	557	.	NC_000913	356671	356671
UN	558	.	NC_000913	356673	356674
UN	559	.	NC_000913	356683	356702
UN	560	.	NC_000913	356706	356706
UN	561	.	NC_000913	356709	356709
UN	562	.	NC_000913	356712	356712
UN	563	.	NC_000913	356732	356740
UN	564	.	NC_000913	356742	357279
UN	565	.	NC_000913	357282	357282
UN	566	.	NC_000913	357284	357284
UN	567	.	NC_000913	357286	357288
UN	568	.	NC_000913	357290	357296
UN	569	.	NC_000913	357302	357302
UN	570	.	NC_000913	357306	357306
UN	571	.	NC_000913	357334	357334
UN	572	.	NC_000913	357355	357355
UN	573	.	NC_000913	357361	357378
UN	574	.	NC_000913	357397	357397
UN	575	.	NC_000913	357407	357407
UN	576	.	NC_000913	357417	357417
UN	577	.	NC_000913	357423	357436
UN	578	.	NC_000913	357441	357441
UN	579	.	NC_000913	357443	357443
UN	580	.	NC_000913	357445	357445
UN	581	.	NC_000913	357448	357448
UN	582	.	NC_000913	357452	357452
UN	583	.	NC_000913	357454	357455
UN	584	.	NC_000913	357458	357460
UN	585	.	NC_000913	357462	357465
UN	586	.	NC_000913	357467	357468
UN	587	.	NC_000913	357470	357470
UN	588	.	NC_000913	357477	357477
UN	589	.	NC_000913	357481	357482
UN	590	.	NC_000913	357485	357494
UN	591	.	NC_000913	357497	357499
UN	592	.	NC_000913	357501	357504
UN	593	.	NC_000913	357506	358848
UN	594	.	NC_000913	359021	359021
UN	595	.	NC_000913	359036	359036
UN	596	.	NC_000913	359065	359065
UN	597	.	NC_000913	359067	359067
UN	598	.	NC_000913	359097	359097
UN	599	.	NC_000913	359101	359101
UN	600	.	NC_000913	359104	359104
UN	601	.	NC_000913	359108	359109
UN	602	.	NC_000913	359143	359143
UN	603	.	NC_000913	359178	359178
UN	604	.	NC_000913	359187	359187
UN	605	.	NC_000913	359199	359199
UN	606	.	NC_000913	359203	359203
UN	607	.	NC_000913	359205	359206
UN	608	.	NC_000913	359211	359211
UN	609	.	NC_000913	359213	359213
UN	610	.	NC_000913	359216	359217
UN	611	.	NC_000913	359221	359491
UN	612	.	NC_000913	359493	359494
UN	613	.	NC_000913	359496	359496
UN	614	.	NC_000913	366181	366266
UN	615	.	NC_000913	366268	366270
UN	616	.	NC_000913	372319	372337
UN	617	.	NC_000913	372339	373898
UN	618	.	NC_000913	373987	373987
UN	619	.	NC_000913	374263	374264
UN	620	.	NC_000913	374297	374297
UN	621	.	NC_000913	374313	374348
UN	622	.	NC_000913	374372	374904
UN	623	.	NC_000913	374910	374911
UN	624	.	NC_000913	374913	374913
UN	625	.	NC_000913	374915	374917
UN	626	.	NC_000913	374919	374919
UN	627	.	NC_000913	374922	374927
UN	628	.	NC_000913	374930	374930
UN	629	.	NC_000913	374932	374941
UN	630	.	NC_000913	374943	374951
UN	631	.	NC_000913	374953	374983
UN	632	.	NC_000913	374985	374990
UN	633	.	NC_000913	374992	374992
UN	634	.	NC_000913	374994	374995
UN	635	.	NC_000913	374997	375000
UN	636	.	NC_000913	375004	375004
UN	637	.	NC_000913	375006	375006
UN	638	.	NC_000913	375011	375011
UN	639	.	NC_000913	375013	375013
UN	640	.	NC_000913	375023	375023
UN	641	.	NC_000913	375025	375026
UN	642	.	NC_000913	375028	375032
UN	643	.	NC_000913	375034	375034
UN	644	.	NC_000913	375036	375038
UN	645	.	NC_000913	375040	375045
UN	646	.	NC_000913	375047	375054
UN	647	.	NC_000913	375056	375210
UN	648	.	NC_000913	375212	375212
UN	649	.	NC_000913	375214	375227
UN	650	.	NC_000913	375229	375230
UN	651	.	NC_000913	375232	375235
UN	652	.	NC_000913	375238	375242
UN	653	.	NC_000913	375244	375244
UN	654	.	NC_000913	375246	375246
UN	655	.	NC_000913	375248	375248
UN	656	.	NC_000913	375251	375251
UN	657	.	NC_000913	375254	375263
UN	658	.	NC_000913	375268	375268
UN	659	.	NC_000913	375270	375271
UN	660	.	NC_000913	375273	375274
UN	661	.	NC_000913	375276	375276
UN	662	.	NC_000913	375279	375279
UN	663	.	NC_000913	375283	375283
UN	664	.	NC_000913	375287	375289
UN	665	.	NC_000913	375296	375296
UN	666	.	NC_000913	375299	375300
UN	667	.	NC_000913	375305	375305
UN	668	.	NC_000913	375307	375308
UN	669	.	NC_000913	375320	375320
UN	670	.	NC_000913	375326	375326
UN	671	.	NC_000913	375331	375331
UN	672	.	NC_000913	375341	375341
UN	673	.	NC_000913	375367	375367
UN	674	.	NC_000913	375372	375372
UN	675	.	NC_000913	375374	375374
UN	676	.	NC_000913	375381	375381
UN	677	.	NC_000913	375385	375385
UN	678	.	NC_000913	375395	375395
UN	679	.	NC_000913	375402	375402
UN	680	.	NC_000913	375417	375417
UN	681	.	NC_000913	381473	382363
UN	682	.	NC_000913	391919	392741
UN	683	.	NC_000913	526085	526085
UN	684	.	NC_000913	526088	526088
UN	685	.	NC_000913	526091	526497
UN	686	.	NC_000913	526504	526504
UN	687	.	NC_000913	566988	567843
UN	688	.	NC_000913	574806	574807
UN	689	.	NC_000913	574809	575561
UN	690	.	NC_000913	608235	608236
UN	691	.	NC_000913	608238	609132
UN	692	.	NC_000913	609134	609137
UN	693	.	NC_000913	688082	688821
UN	694	.	NC_000913	688823	688824
UN	695	.	NC_000913	987492	987492
UN	696	.	NC_000913	987494	987495
UN	697	.	NC_000913	987497	987497
UN	698	.	NC_000913	987500	987500
UN	699	.	NC_000913	1094462	1095278
UN	700	.	NC_000913	1095283	1095283
UN	701	.	NC_000913	1095289	1095289
UN	702	.	NC_000913	1095291	1095291
UN	703	.	NC_000913	1095293	1095293
UN	704	.	NC_000913	1129325	1129325
UN	705	.	NC_000913	1196348	1196348
UN	706	.	NC_000913	1196351	1211429
UN	707	.	NC_000913	1299499	1300697
UN	708	.	NC_000913	1396183	1396183
UN	709	.	NC_000913	1396188	1396188
UN	710	.	NC_000913	1396202	1397028
UN	711	.	NC_000913	1397030	1397030
UN	712	.	NC_000913	1432844	1433023
UN	713	.	NC_000913	1433818	1433823
UN	714	.	NC_000913	1433826	1433832
UN	715	.	NC_000913	1433841	1433842
UN	716	.	NC_000913	1433844	1433846
UN	717	.	NC_000913	1433857	1433863
UN	718	.	NC_000913	1433865	1433865
UN	719	.	NC_000913	1433870	1433900
UN	720	.	NC_000913	1468123	1469025
UN	721	.	NC_000913	1469494	1470331
UN	722	.	NC_000913	1528539	1528540
UN	723	.	NC_000913	1528542	1528542
UN	724	.	NC_000913	1528544	1528940
UN	725	.	NC_000913	1528942	1528942
UN	726	.	NC_000913	1571087	1571087
UN	727	.	NC_000913	1571093	1571116
UN	728	.	NC_000913	1588756	1588877
UN	729	.	NC_000913	1588920	1588920
UN	730	.	NC_000913	1588922	1588922
UN	731	.	NC_000913	1588945	1588945
UN	732	.	NC_000913	1588949	1588949
UN	733	.	NC_000913	1588984	1588984
UN	734	.	NC_000913	1589050	1589725
UN	735	.	NC_000913	1633397	1633399
UN	736	.	NC_000913	1634273	1634273
UN	737	.	NC_000913	1634275	1634276
UN	738	.	NC_000913	1634281	1634282
UN	739	.	NC_000913	1634284	1634285
UN	740	.	NC_000913	1634288	1634439
UN	741	.	NC_000913	1651065	1651337
UN	742	.	NC_000913	1651341	1651341
UN	743	.	NC_000913	1704350	1704739
UN	744	.	NC_000913	1978495	1979270
UN	745	.	NC_000913	2066955	2067077
UN	746	.	NC_000913	2069154	2070064
UN	747	.	NC_000913	2070068	2070074
UN	748	.	NC_000913	2101979	2102742
UN	749	.	NC_000913	2102751	2102751
UN	750	.	NC_000913	2151686	2151686
UN	751	.	NC_000913	2170382	2170382
UN	752	.	NC_000913	2170384	2170384
UN	753	.	NC_000913	2170386	2171204
UN	754	.	NC_000913	2171209	2171209
UN	755	.	NC_000913	2238416	2238434
UN	756	.	NC_000913	2289121	2289121
UN	757	.	NC_000913	2289137	2289138
UN	758	.	NC_000913	2289144	2289903
UN	759	.	NC_000913	2289908	2289908
UN	760	.	NC_000913	2289927	2289927
UN	761	.	NC_000913	2289939	2289939
UN	762	.	NC_000913	2514483	2514483
UN	763	.	NC_000913	2514485	2515395
UN	764	.	NC_000913	2515397	2515397
UN	765	.	NC_000913	2726279	2729053
UN	766	.	NC_000913	2729791	2729791
UN	767	.	NC_000913	2729793	2729793
UN	768	.	NC_000913	2729795	2730735
UN	769	.	NC_000913	2942765	2942772
UN	770	.	NC_000913	2996573	2997479
UN	771	.	NC_000913	2997481	2997481
UN	772	.	NC_000913	3117499	3117499
UN	773	.	NC_000913	3117501	3117504
UN	774	.	NC_000913	3117509	3117509
UN	775	.	NC_000913	3130365	3131143
UN	776	.	NC_000913	3131145	3131146
UN	777	.	NC_000913	3131148	3131148
UN	778	.	NC_000913	3131152	3131152
UN	779	.	NC_000913	3186300	3186301
UN	780	.	NC_000913	3186307	3186307
UN	781	.	NC_000913	3186309	3186309
UN	782	.	NC_000913	3186311	3187204
UN	783	.	NC_000913	3365787	3366532
UN	784	.	NC_000913	3366534	3366534
UN	785	.	NC_000913	3366536	3366536
UN	786	.	NC_000913	3423874	3423875
UN	787	.	NC_000913	3423881	3424424
UN	788	.	NC_000913	3424426	3424427
UN	789	.	NC_000913	3424861	3424861
UN	790	.	NC_000913	3424863	3424863
UN	791	.	NC_000913	3424865	3426621
UN	792	.	NC_000913	3426623	3426624
UN	793	.	NC_000913	3427014	3428321
UN	794	.	NC_000913	3428324	3428324
UN	795	.	NC_000913	3470378	3470378
UN	796	.	NC_000913	3470392	3470506
UN	797	.	NC_000913	3470509	3470510
UN	798	.	NC_000913	3583647	3583973
UN	799	.	NC_000913	3619468	3619470
UN	800	.	NC_000913	3619474	3619474
UN	801	.	NC_000913	3619476	3620857
UN	802	.	NC_000913	3621322	3621322
UN	803	.	NC_000913	3621327	3622064
UN	804	.	NC_000913	3652239	3652242
UN	805	.	NC_000913	3652245	3653024
UN	806	.	NC_000913	3666613	3666613
UN	807	.	NC_000913	3666616	3666670
UN	808	.	NC_000913	3708461	3708461
UN	809	.	NC_000913	3708463	3708527
UN	810	.	NC_000913	3762477	3765057
UN	811	.	NC_000913	3942257	3943178
UN	812	.	NC_000913	3944260	3944260
UN	813	.	NC_000913	3944263	3944263
UN	814	.	NC_000913	3944266	3944266
UN	815	.	NC_000913	3944273	3945349
UN	816	.	NC_000913	4035377	4035377
UN	817	.	NC_000913	4035383	4035383
UN	818	.	NC_000913	4035387	4035388
UN	819	.	NC_000913	4035390	4036871
UN	820	.	NC_000913	4036873	4036874
UN	821	.	NC_000913	4038053	4038466
UN	822	.	NC_000913	4038468	4038468
UN	823	.	NC_000913	4038471	4038471
UN	824	.	NC_000913	4038473	4038473
UN	825	.	NC_000913	4038961	4039171
UN	826	.	NC_000913	4039620	4039620
UN	827	.	NC_000913	4039624	4040402
UN	828	.	NC_000913	4166486	4166639
UN	829	.	NC_000913	4166642	4166643
UN	830	.	NC_000913	4166849	4166849
UN	831	.	NC_000913	4166863	4166864
UN	832	.	NC_000913	4166869	4166869
UN	833	.	NC_000913	4166872	4167992
UN	834	.	NC_000913	4167999	4167999
UN	835	.	NC_000913	4168801	4168801
UN	836	.	NC_000913	4168807	4171489
UN	837	.	NC_000913	4176736	4176738
UN	838	.	NC_000913	4176741	4176741
UN	839	.	NC_000913	4176744	4176882
UN	840	.	NC_000913	4208295	4208295
UN	841	.	NC_000913	4208300	4208301
UN	842	.	NC_000913	4208304	4209509
UN	843	.	NC_000913	4209511	4209512
UN	844	.	NC_000913	4209516	4209516
UN	845	.	NC_000913	4210228	4210232
UN	846	.	NC_000913	4210234	4212916
UN	847	.	NC_000913	4212918	4212918
UN	848	.	NC_000913	4498387	4498387
UN	849	.	NC_000913	4498389	4499280
UN	850	.	NC_000913	4507662	4507662
UN	851	.	NC_000913	4507666	4508451
UN	852	.	NC_000913	4508457	4508457
UN	853	.	NC_000913	4508459	4508461
UN	854	.	NC_000913	4540730	4540730
UN	855	.	NC_000913	4540738	4540739
UN	856	.	NC_000913	4540741	4540743
UN	857	.	NC_000913	4540749	4540749
UN	858	.	NC_000913	4540751	4542283
UN	859	.	NC_000913	4542289	4542289
UN	860	.	NC_000913	4542294	4542295
UN	861	.	NC_000913	4542302	4542302
UN	862	.	NC_000913	4542330	4542330
UN	863	.	NC_000913	4542342	4542342
UN	864	.	NC_000913	4542352	4543903
UN	865	.	NC_000913	4543925	4546132
UN	866	.	NC_000913	4546135	4546137
UN	867	.	NC_000913	4546144	4546145
UN	868	.	NC_000913	4546147	4546149
UN	869	.	NC_000913	4546151	4546151
UN	870	.	NC_000913	4546157	4546165
UN	871	.	NC_000913	4546167	4546170
UN	872	.	NC_000913	4546173	4546589
UN	873	.	NC_000913	4546591	4546610
UN	874	.	NC_000913	4546612	4546624
UN	875	.	NC_000913	4546626	4546630
UN	876	.	NC_000913	4546642	4546674
UN	877	.	NC_000913	4546709	4546742
UN	878	.	NC_000913	4546744	4546746
UN	879	.	NC_000913	4546748	4546768
UN	880	.	NC_000913	4546770	4546785
UN	881	.	NC_000913	4546787	4551762
UN	882	.	NC_000913	4551769	4551769
UN	883	.	NC_000913	4551779	4551779
UN	884	.	NC_000913	4551979	4551979
UN	885	.	NC_000913	4551991	4551991
UN	886	.	NC_000913	4551998	4551998
UN	887	.	NC_000913	4552009	4553727
UN	888	.	NC_000913	4553737	4553752
UN	889	.	NC_000913	4553754	4553784
UN	890	.	NC_000913	4553786	4553803
UN	891	.	NC_000913	4553813	4553814
UN	892	.	NC_000913	4553823	4553823
UN	893	.	NC_000913	4553837	4553837
UN	894	.	NC_000913	4553842	4553842
UN	895	.	NC_000913	4553853	4553853
UN	896	.	NC_000913	4553866	4553866
UN	897	.	NC_000913	4553876	4553876
UN	898	.	NC_000913	4553878	4553878
UN	899	.	NC_000913	4553883	4553883
UN	900	.	NC_000913	4553922	4553922
UN	901	.	NC_000913	4553947	4553947
UN	902	.	NC_000913	4553986	4553986
UN	903	.	NC_000913	4553995	4553995
UN	904	.	NC_000913	4553999	4554000
UN	905	.	NC_000913	4554034	4554034
UN	906	.	NC_000913	4554043	4554043
UN	907	.	NC_000913	4554052	4555105
UN	908	.	NC_000913	4555109	4555109
UN	909	.	NC_000913	4555114	4555114
UN	910	.	NC_000913	4555116	4555116
UN	911	.	NC_000913	4555119	4555119
UN	912	.	NC_000913	4555125	4555125
UN	913	.	NC_000913	4555129	4555129
UN	914	.	NC_000913	4555135	4555136
UN	915	.	NC_000913	4555141	4555141
UN	916	.	NC_000913	4555144	4555144
UN	917	.	NC_000913	4555150	4555151
UN	918	.	NC_000913	4555154	4555156
UN	919	.	NC_000913	4555164	4555165
UN	920	.	NC_000913	4555167	4555167
UN	921	.	NC_000913	4555169	4555169
UN	922	.	NC_000913	4555174	4555174
UN	923	.	NC_000913	4555176	4555176
UN	924	.	NC_000913	4555179	4555179
UN	925	.	NC_000913	4555186	4555186
UN	926	.	NC_000913	4555189	4555189
UN	927	.	NC_000913	4555191	4555191
UN	928	.	NC_000913	4555195	4555195
UN	929	.	NC_000913	4555202	4556023
UN	930	.	NC_000913	4556025	4556034
UN	931	.	NC_000913	4556036	4556044
UN	932	.	NC_000913	4556067	4556071
UN	933	.	NC_000913	4556073	4556076
UN	934	.	NC_000913	4556173	4556173
UN	935	.	NC_000913	4556182	4556182
UN	936	.	NC_000913	4556186	4557052
UN	937	.	NC_000913	4557054	4557054
UN	938	.	NC_000913	4557062	4557062
UN	939	.	NC_000913	4557145	4557145
UN	940	.	NC_000913	4557208	4557208
UN	941	.	NC_000913	4557254	4558380
UN	942	.	NC_000913	4558383	4558384
UN	943	.	NC_000913	4558413	4558415
UN	944	.	NC_000913	4558427	4558427
UN	945	.	NC_000913	4558430	4558430
UN	946	.	NC_000913	4558451	4558452
UN	947	.	NC_000913	4558463	4558463
UN	948	.	NC_000913	4558481	4558481
UN	949	.	NC_000913	4558490	4558490
UN	950	.	NC_000913	4558511	4558526
UN	951	.	NC_000913	4558532	4558533
UN	952	.	NC_000913	4558536	4558544
UN	953	.	NC_000913	4558553	4558554
UN	954	.	NC_000913	4558558	4558558
UN	955	.	NC_000913	4558560	4558562
UN	956	.	NC_000913	4558565	4558565
UN	957	.	NC_000913	4558568	4558569
UN	958	.	NC_000913	4558571	4558572
UN	959	.	NC_000913	4558577	4558578
UN	960	.	NC_000913	4558580	4558580
UN	961	.	NC_000913	4558583	4558583
UN	962	.	NC_000913	4558585	4558585
UN	963	.	NC_000913	4558587	4558587
UN	964	.	NC_000913	4558596	4558596
UN	965	.	NC_000913	4558601	4558601
UN	966	.	NC_000913	4558618	4558618
UN	967	.	NC_000913	4558622	4558625
UN	968	.	NC_000913	4558633	4558635
UN	969	.	NC_000913	4558638	4558640
UN	970	.	NC_000913	4558645	4558646
UN	971	.	NC_000913	4558653	4558653
UN	972	.	NC_000913	4558658	4558658
UN	973	.	NC_000913	4558672	4558673
UN	974	.	NC_000913	4558675	4558675
UN	975	.	NC_000913	4558680	4558680
UN	976	.	NC_000913	4558682	4558682
UN	977	.	NC_000913	4558686	4558686
UN	978	.	NC_000913	4558688	4558688
UN	979	.	NC_000913	4558693	4563859
UN	980	.	NC_000913	4563861	4565345
UN	981	.	NC_000913	4565351	4565351
UN	982	.	NC_000913	4565408	4565408
UN	983	.	NC_000913	4565465	4565569
UN	984	.	NC_000913	4565577	4565577
UN	985	.	NC_000913	4565582	4565582
UN	986	.	NC_000913	4565594	4568612
UN	987	.	NC_000913	4568614	4568628
UN	988	.	NC_000913	4568631	4568631
UN	989	.	NC_000913	4568639	4568639
UN	990	.	NC_000913	4568655	4568655
UN	991	.	NC_000913	4568658	4568658
UN	992	.	NC_000913	4568660	4568660
UN	993	.	NC_000913	4568721	4568721
UN	994	.	NC_000913	4568736	4568736
UN	995	.	NC_000913	4568751	4568753
UN	996	.	NC_000913	4568755	4569010
UN	997	.	NC_000913	4569013	4569015
UN	998	.	NC_000913	4569018	4569018
UN	999	.	NC_000913	4569021	4569021
UN	1000	.	NC_000913	4569030	4569030
UN	1001	.	NC_000913	4569033	4569040
UN	1002	.	NC_000913	4569045	4569047
UN	1003	.	NC_000913	4569050	4569050
UN	1004	.	NC_000913	4569063	4569063
UN	1005	.	NC_000913	4569065	4569065
UN	1006	.	NC_000913	4569067	4569067
UN	1007	.	NC_000913	4569070	4569070
UN	1008	.	NC_000913	4569077	4569077
UN	1009	.	NC_000913	4569079	4569079
UN	1010	.	NC_000913	4569082	4569082
UN	1011	.	NC_000913	4569085	4569087
UN	1012	.	NC_000913	4569091	4569092
UN	1013	.	NC_000913	4569094	4569094
UN	1014	.	NC_000913	4569101	4569104
UN	1015	.	NC_000913	4569106	4570868
UN	1016	.	NC_000913	4570870	4575271
UN	1017	.	NC_000913	4575275	4575275
UN	1018	.	NC_000913	4575279	4575280
UN	1019	.	NC_000913	4575300	4575301
UN	1020	.	NC_000913	4575306	4575306
UN	1021	.	NC_000913	4575309	4575309
UN	1022	.	NC_000913	4575313	4575313
UN	1023	.	NC_000913	4575317	4575317
UN	1024	.	NC_000913	4575326	4575326
UN	1025	.	NC_000913	4575328	4575328
UN	1026	.	NC_000913	4575334	4576491
UN	1027	.	NC_000913	4576493	4576493
UN	1028	.	NC_000913	4576507	4577518
UN	1029	.	NC_000913	4577522	4577522
UN	1030	.	NC_000913	4577531	4577531
UN	1031	.	NC_000913	4577544	4577544
UN	1032	.	NC_000913	4577561	4577561
UN	1033	.	NC_000913	4577601	4577613
UN	1034	.	NC_000913	4577616	4577616
UN	1035	.	NC_000913	4577659	4577670
UN	1036	.	NC_000913	4577680	4577680
UN	1037	.	NC_000913	4577694	4577694
UN	1038	.	NC_000913	4577703	4577703
UN	1039	.	NC_000913	4577815	4577848
UN	1040	.	NC_000913	4577852	4577852
UN	1041	.	NC_000913	4577855	4577856
UN	1042	.	NC_000913	4577859	4577863
UN	1043	.	NC_000913	4577865	4577866
UN	1044	.	NC_000913	4577871	4578934
UN	1045	.	NC_000913	4578961	4578961
UN	1046	.	NC_000913	4579017	4579017
UN	1047	.	NC_000913	4579070	4581632
UN	1048	.	NC_000913	4581634	4581635
UN	1049	.	NC_000913	4581637	4581637
UN	1050	.	NC_000913	4581652	4581653
UN	1051	.	NC_000913	4581673	4581675
UN	1052	.	NC_000913	4581678	4581678
UN	1053	.	NC_000913	4581684	4581684
UN	1054	.	NC_000913	4581691	4581691
UN	1055	.	NC_000913	4581693	4581693
UN	1056	.	NC_000913	4581703	4581703
UN	1057	.	NC_000913	4581706	4581709
UN	1058	.	NC_000913	4581713	4581713
UN	1059	.	NC_000913	4581720	4581720
UN	1060	.	NC_000913	4581726	4581727
UN	1061	.	NC_000913	4581731	4582734
UN	1062	.	NC_000913	4582737	4582737
UN	1063	.	NC_000913	4582764	4582764
UN	1064	.	NC_000913	4582783	4582783
UN	1065	.	NC_000913	4582798	4582798
UN	1066	.	NC_000913	4582803	4582803
UN	1067	.	NC_000913	4582806	4582807
UN	1068	.	NC_000913	4582810	4582810
UN	1069	.	NC_000913	4582813	4587421
UN	1070	.	NC_000913	4587424	4587428
UN	1071	.	NC_000913	4587430	4587432
UN	1072	.	NC_000913	4587435	4587439
UN	1073	.	NC_000913	4587441	4587442
UN	1074	.	NC_000913	4587444	4587447
UN	1075	.	NC_000913	4587462	4587463
UN	1076	.	NC_000913	4587468	4587469
UN	1077	.	NC_000913	4587480	4587480
UN	1078	.	NC_000913	4587490	4593854
UN	1079	.	NC_000913	4593856	4593866
UN	1080	.	NC_000913	4593951	4593951
UN	1081	.	NC_000913	4594014	4594014
UN	1082	.	NC_000913	4594018	4594018
UN	1083	.	NC_000913	4594021	4594021
UN	1084	.	NC_000913	4594025	4594025
UN	1085	.	NC_000913	4594035	4594035
UN	1086	.	NC_000913	4594039	4594040
UN	1087	.	NC_000913	4594043	4594043
UN	1088	.	NC_000913	4594048	4594048
UN	1089	.	NC_000913	4594053	4595329
UN	1090	.	NC_000913	4595334	4595334
UN	1091	.	NC_000913	4595344	4595352
UN	1092	.	NC_000913	4595354	4595358
UN	1093	.	NC_000913	4595361	4595361
UN	1094	.	NC_000913	4595365	4595365
UN	1095	.	NC_000913	4595371	4595371
UN	1096	.	NC_000913	4595373	4595373
UN	1097	.	NC_000913	4595376	4595376
UN	1098	.	NC_000913	4595379	4595379
UN	1099	.	NC_000913	4595385	4595385
UN	1100	.	NC_000913	4595391	4595391
UN	1101	.	NC_000913	4595394	4595394
UN	1102	.	NC_000913	4595398	4595399
UN	1103	.	NC_000913	4595402	4595403
UN	1104	.	NC_000913	4595407	4595407
UN	1105	.	NC_000913	4595409	4595409
UN	1106	.	NC_000913	4595432	4595433
UN	1107	.	NC_000913	4595437	4595437
UN	1108	.	NC_000913	4595439	4595439
UN	1109	.	NC_000913	4595442	4595443
UN	1110	.	NC_000913	4595450	4595450
UN	1111	.	NC_000913	4595454	4595454
UN	1112	.	NC_000913	4595460	4595537
UN	1113	.	NC_000913	4595540	4595540
UN	1114	.	NC_000913	4595545	4595615
UN	1115	.	NC_000913	4595619	4595620
UN	1116	.	NC_000913	4595622	4595622
UN	1117	.	NC_000913	4595625	4595625
UN	1118	.	NC_000913	4595629	4595629
UN	1119	.	NC_000913	4595635	4595635
UN	1120	.	NC_000913	4595655	4595655
UN	1121	.	NC_000913	4595660	4595661
UN	1122	.	NC_000913	4595664	4595664
UN	1123	.	NC_000913	4595677	4595677
UN	1124	.	NC_000913	4595733	4595733
UN	1125	.	NC_000913	4595740	4595740
UN	1126	.	NC_000913	4595748	4595748
UN	1127	.	NC_000913	4595768	4595771
UN	1128	.	NC_000913	4595778	4595867
UN	1129	.	NC_000913	4595869	4595869
UN	1130	.	NC_000913	4595872	4595873
UN	1131	.	NC_000913	4595876	4595876
UN	1132	.	NC_000913	4595879	4595880
UN	1133	.	NC_000913	4595882	4595883
UN	1134	.	NC_000913	4595885	4595885
UN	1135	.	NC_000913	4595887	4595889
UN	1136	.	NC_000913	4595891	4595893
UN	1137	.	NC_000913	4595896	4595896
UN	1138	.	NC_000913	4595898	4595898
UN	1139	.	NC_000913	4595900	4595900
UN	1140	.	NC_000913	4595902	4595904
UN	1141	.	NC_000913	4595909	4595910
UN	1142	.	NC_000913	4595918	4595987
UN	1143	.	NC_000913	4595989	4595990
UN	1144	.	NC_000913	4595994	4595999
UN	1145	.	NC_000913	4596001	4596008
UN	1146	.	NC_000913	4596010	4596010
UN	1147	.	NC_000913	4596013	4596020
UN	1148	.	NC_000913	4596023	4596023
UN	1149	.	NC_000913	4596026	4596029
UN	1150	.	NC_000913	4596031	4596032
UN	1151	.	NC_000913	4596036	4596040
UN	1152	.	NC_000913	4596042	4596045
UN	1153	.	NC_000913	4596047	4596047
UN	1154	.	NC_000913	4596050	4596057
UN	1155	.	NC_000913	4596062	4596066
UN	1156	.	NC_000913	4596068	4596072
UN	1157	.	NC_000913	4596076	4596076
UN	1158	.	NC_000913	4596078	4596079
UN	1159	.	NC_000913	4596083	4596084
UN	1160	.	NC_000913	4596089	4597433