#=GENOME_DIFF	1.0
#=CREATED	18:16:44 28 Nov 2024
#=PROGRAM	breseq 0.39.0 
#=COMMAND	breseq -j 8 -o /ld1/breseq_work/20231211run9/CV55_S11_L001_R1R2_001 -r /ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff /ld1/raw_sequence_data/20231211run9/CV55_S11_L001_R1_001.fastq.gz /ld1/raw_sequence_data/20231211run9/CV55_S11_L001_R2_001.fastq.gz
#=REFSEQ	/ld1/E.coli_MG1655_ref/MG1655/ncbi_dataset/data/GCF_000005845.2/genomic.gbff
#=READSEQ	/ld1/raw_sequence_data/20231211run9/CV55_S11_L001_R1_001.fastq.gz
#=READSEQ	/ld1/raw_sequence_data/20231211run9/CV55_S11_L001_R2_001.fastq.gz
#=CONVERTED-BASES	144753794
#=CONVERTED-READS	592416
#=INPUT-BASES	144770702
#=INPUT-READS	592698
#=MAPPED-BASES	117633461
#=MAPPED-READS	486508
SNP	1	127	NC_000913	100946	C
SNP	2	128	NC_000913	246747	T
DEL	3	294,322	NC_000913	366181	93
SUB	4	129,130	NC_000913	480295	2	AA
SNP	5	131	NC_000913	496382	G
SNP	6	133	NC_000913	690948	A
SNP	7	134	NC_000913	700038	A
SUB	8	135,136	NC_000913	809217	2	AG
SNP	9	137	NC_000913	822527	T
MOB	10	324,325	NC_000913	886412	IS2	-1	5
SNP	11	138	NC_000913	968837	A
SNP	12	139	NC_000913	1040126	T
SNP	13	140	NC_000913	1061935	A
SNP	14	141	NC_000913	1098620	A
SUB	15	142,143	NC_000913	1111727	2	TT
SNP	16	144	NC_000913	1169836	G
SNP	17	145	NC_000913	1189980	G
SNP	18	146	NC_000913	1194922	A
SNP	19	147	NC_000913	1196232	T
SNP	20	148	NC_000913	1196245	C
MOB	21	328,329	NC_000913	1223636	IS2	-1	5
SNP	22	149	NC_000913	1253002	T
DEL	23	303,330	NC_000913	1299499	1199
MOB	24	321,331	NC_000913	1301050	IS1	1	9
SNP	25	150	NC_000913	1301992	T
SNP	26	151	NC_000913	1306736	G
SNP	27	152	NC_000913	1310770	G
SNP	28	153	NC_000913	1337394	G
SNP	29	154	NC_000913	1357202	T
SNP	30	155	NC_000913	1358859	C
SNP	31	156	NC_000913	1441038	A
SUB	32	157,158,159,160	NC_000913	1497385	4	CAA
SNP	33	161	NC_000913	1584092	A
SNP	34	162	NC_000913	1629247	T
SNP	35	163	NC_000913	1643679	T
SNP	36	164	NC_000913	1652331	C
MOB	37	334,335	NC_000913	1652623	IS2	-1	5
SNP	38	165	NC_000913	1667460	A
SNP	39	166	NC_000913	1682459	G
SNP	40	167	NC_000913	1748841	T
SNP	41	168	NC_000913	1767014	T
SUB	42	169,170	NC_000913	1848300	2	TT
SNP	43	171	NC_000913	1849629	C
SNP	44	172	NC_000913	1894839	C
DEL	45	304,337	NC_000913	1978503	776
SNP	46	173	NC_000913	2041278	A
SNP	47	174	NC_000913	2052885	A
MOB	48	338,339	NC_000913	2089842	IS1	1	9
SNP	49	175	NC_000913	2104024	T
DEL	50	176	NC_000913	2111259	1
SNP	51	177	NC_000913	2142598	A
SNP	52	178	NC_000913	2155197	A
DEL	53	179,180	NC_000913	2173363	2
SNP	54	181	NC_000913	2173448	T
MOB	55	341,342	NC_000913	2176844	IS4	-1	13
SNP	56	182	NC_000913	2233609	T
MOB	57	343,344	NC_000913	2238948	IS186	-1	6	del_end=2	del_start=1
SNP	58	183	NC_000913	2247134	C
SNP	59	184	NC_000913	2307733	T
SNP	60	185	NC_000913	2310878	T
SNP	61	186	NC_000913	2404402	A
INS	62	187	NC_000913	2405840	T
SNP	63	188	NC_000913	2446592	A
DEL	64	189	NC_000913	2485636	1
SNP	65	190	NC_000913	2485638	A
SNP	66	191	NC_000913	2522369	A
SNP	67	192	NC_000913	2587112	T
SNP	68	193	NC_000913	2702363	A
SNP	69	202	NC_000913	2774947	A
SNP	70	203	NC_000913	2867311	T
SNP	71	204	NC_000913	2880635	C
SNP	72	205	NC_000913	2926772	A
SNP	73	207	NC_000913	2937210	T
SNP	74	208	NC_000913	2938548	T
DEL	75	209	NC_000913	3025601	1	repeat_length=1	repeat_new_copies=4	repeat_ref_copies=5	repeat_seq=T
SNP	76	210	NC_000913	3070858	G
DEL	77	211	NC_000913	3207549	1
SNP	78	212	NC_000913	3279276	G
SNP	79	213	NC_000913	3296481	A
SNP	80	214	NC_000913	3324965	T
SNP	81	215	NC_000913	3326537	A
SNP	82	216	NC_000913	3329743	T
SNP	83	217	NC_000913	3388041	G
SNP	84	218	NC_000913	3411689	T
SNP	85	219	NC_000913	3433900	T
SNP	86	220	NC_000913	3439485	T
SNP	87	225	NC_000913	3486502	T
SNP	88	226	NC_000913	3486538	C
SNP	89	227	NC_000913	3511466	T
SNP	90	228	NC_000913	3555047	C
SNP	91	229	NC_000913	3560362	A
INS	92	230	NC_000913	3560455	G
SNP	93	231	NC_000913	3647428	T
SNP	94	232	NC_000913	3707947	A
SNP	95	233	NC_000913	3719429	A
SNP	96	234	NC_000913	3725176	G
SNP	97	237	NC_000913	3730560	T
SNP	98	238	NC_000913	3770539	T
DEL	99	239	NC_000913	3773173	1
SNP	100	240	NC_000913	3773176	T
INS	101	241	NC_000913	3815883	C
SNP	102	242	NC_000913	3925834	T
SNP	103	243	NC_000913	3926991	A
SUB	104	244,245	NC_000913	3966530	2	TT
SNP	105	248	NC_000913	4003502	T
MOB	106	350,351	NC_000913	4123617	IS2	-1	5
SNP	107	250	NC_000913	4133311	A
SNP	108	251	NC_000913	4150418	G
SNP	109	252	NC_000913	4193996	G
SNP	110	253	NC_000913	4217310	G
SNP	111	254	NC_000913	4223638	C
INS	112	255,256	NC_000913	4296381	GC
SNP	113	257	NC_000913	4325644	T
SNP	114	258	NC_000913	4331890	T
SNP	115	260	NC_000913	4437890	T
SNP	116	261	NC_000913	4473900	T
SNP	117	262	NC_000913	4475493	C
SNP	118	263	NC_000913	4476605	A
SNP	119	264	NC_000913	4489016	T
SNP	120	265	NC_000913	4510238	G
SNP	121	266	NC_000913	4532409	G
SNP	122	267	NC_000913	4546601	T
SNP	123	268	NC_000913	4620610	A
SNP	124	269	NC_000913	4636925	C
SNP	125	270	NC_000913	4638240	A
MOB	126	353,354	NC_000913	4640418	IS30	-1	2
RA	127	.	NC_000913	100946	0	T	C	consensus_score=71.6	frequency=1	major_base=C	major_cov=13/10	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/10	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/10
RA	128	.	NC_000913	246747	0	G	T	bias_e_value=4476880	bias_p_value=0.964502	consensus_score=60.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.745665	major_base=T	major_cov=15/8	major_frequency=9.583e-01	minor_base=G	minor_cov=1/0	new_cov=15/8	polymorphism_frequency=9.583e-01	polymorphism_score=-3.2	prediction=consensus	ref_cov=1/0	total_cov=16/8
RA	129	.	NC_000913	480295	0	G	A	bias_e_value=4640690	bias_p_value=0.999792	consensus_score=33.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.979696	major_base=A	major_cov=5/8	major_frequency=8.667e-01	minor_base=G	minor_cov=1/1	new_cov=5/8	polymorphism_frequency=8.667e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=1/1	total_cov=6/9
RA	130	.	NC_000913	480296	0	G	A	bias_e_value=4571650	bias_p_value=0.984918	consensus_score=31.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.831424	major_base=A	major_cov=5/8	major_frequency=8.667e-01	minor_base=G	minor_cov=1/1	new_cov=5/8	polymorphism_frequency=8.667e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/1	total_cov=6/9
RA	131	.	NC_000913	496382	0	C	G	bias_e_value=2692160	bias_p_value=0.58	consensus_score=108.6	fisher_strand_p_value=0.576814	frequency=1	ks_quality_p_value=0.41304	major_base=G	major_cov=20/15	major_frequency=9.211e-01	minor_base=C	minor_cov=1/2	new_cov=20/15	polymorphism_frequency=9.211e-01	polymorphism_score=3.2	prediction=consensus	ref_cov=1/2	total_cov=21/17
RA	132	.	NC_000913	581337	0	G	A	bias_e_value=3616880	bias_p_value=0.779223	consensus_reject=FREQUENCY_CUTOFF	consensus_score=49.6	fisher_strand_p_value=1	frequency=2.069e-01	ks_quality_p_value=0.414137	major_base=G	major_cov=8/15	major_frequency=7.931e-01	minor_base=A	minor_cov=2/4	new_cov=2/4	polymorphism_frequency=2.069e-01	polymorphism_score=10.7	prediction=polymorphism	ref_cov=8/15	total_cov=10/19
RA	133	.	NC_000913	690948	0	G	A	consensus_score=74.4	frequency=1	major_base=A	major_cov=13/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=13/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=13/11
RA	134	.	NC_000913	700038	0	G	A	bias_e_value=3655760	bias_p_value=0.787598	consensus_score=102.0	fisher_strand_p_value=0.557063	frequency=1	ks_quality_p_value=0.760709	major_base=A	major_cov=22/14	major_frequency=9.231e-01	minor_base=G	minor_cov=1/2	new_cov=22/14	polymorphism_frequency=9.231e-01	polymorphism_score=1.2	prediction=consensus	ref_cov=1/2	total_cov=23/16
RA	135	.	NC_000913	809217	0	C	A	bias_e_value=4019650	bias_p_value=0.865997	consensus_score=58.4	fisher_strand_p_value=0.529231	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=9/15	major_frequency=9.231e-01	minor_base=C	minor_cov=0/2	new_cov=9/15	polymorphism_frequency=9.231e-01	polymorphism_score=-2.6	prediction=consensus	ref_cov=0/2	total_cov=9/17
RA	136	.	NC_000913	809218	0	A	G	bias_e_value=2636070	bias_p_value=0.567916	consensus_score=76.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.229925	major_base=G	major_cov=9/15	major_frequency=9.600e-01	minor_base=A	minor_cov=0/1	new_cov=9/15	polymorphism_frequency=9.600e-01	polymorphism_score=-3.9	prediction=consensus	ref_cov=0/1	total_cov=9/17
RA	137	.	NC_000913	822527	0	C	T	consensus_score=53.7	frequency=1	major_base=T	major_cov=6/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/15
RA	138	.	NC_000913	968837	0	G	A	bias_e_value=4332180	bias_p_value=0.933326	consensus_score=59.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.657809	major_base=A	major_cov=7/13	major_frequency=8.696e-01	minor_base=G	minor_cov=1/2	new_cov=7/13	polymorphism_frequency=8.696e-01	polymorphism_score=-2.1	prediction=consensus	ref_cov=1/2	total_cov=8/16
RA	139	.	NC_000913	1040126	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=49.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/14	major_frequency=9.524e-01	minor_base=G	minor_cov=0/1	new_cov=6/14	polymorphism_frequency=9.524e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=6/15
RA	140	.	NC_000913	1061935	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=32.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=10/5	major_frequency=8.333e-01	minor_base=C	minor_cov=2/1	new_cov=10/5	polymorphism_frequency=8.333e-01	polymorphism_score=-4.8	prediction=consensus	ref_cov=0/1	total_cov=12/7
RA	141	.	NC_000913	1098620	0	T	A	bias_e_value=2959830	bias_p_value=0.637667	consensus_score=67.3	fisher_strand_p_value=0.564783	frequency=1	ks_quality_p_value=0.497489	major_base=A	major_cov=13/9	major_frequency=8.800e-01	minor_base=T	minor_cov=1/2	new_cov=13/9	polymorphism_frequency=8.800e-01	polymorphism_score=2.9	prediction=consensus	ref_cov=1/2	total_cov=14/11
RA	142	.	NC_000913	1111727	0	C	T	bias_e_value=3734030	bias_p_value=0.804461	consensus_score=46.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.443956	major_base=T	major_cov=12/7	major_frequency=9.048e-01	minor_base=C	minor_cov=1/1	new_cov=12/7	polymorphism_frequency=9.048e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/1	total_cov=13/9
RA	143	.	NC_000913	1111728	0	C	T	bias_e_value=4297530	bias_p_value=0.925861	consensus_score=47.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.640533	major_base=T	major_cov=12/8	major_frequency=9.091e-01	minor_base=C	minor_cov=1/1	new_cov=12/8	polymorphism_frequency=9.091e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/1	total_cov=13/9
RA	144	.	NC_000913	1169836	0	A	G	bias_e_value=1948010	bias_p_value=0.41968	consensus_score=75.4	fisher_strand_p_value=0.346154	frequency=1	ks_quality_p_value=0.410972	major_base=G	major_cov=8/17	major_frequency=9.615e-01	minor_base=A	minor_cov=1/0	new_cov=8/17	polymorphism_frequency=9.615e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=1/0	total_cov=9/17
RA	145	.	NC_000913	1189980	0	A	G	bias_e_value=3604450	bias_p_value=0.776545	consensus_score=39.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.411112	major_base=G	major_cov=9/7	major_frequency=8.889e-01	minor_base=A	minor_cov=1/1	new_cov=9/7	polymorphism_frequency=8.889e-01	polymorphism_score=-0.7	prediction=consensus	ref_cov=1/1	total_cov=10/8
RA	146	.	NC_000913	1194922	0	G	A	consensus_score=31.0	frequency=1	major_base=A	major_cov=4/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/8
RA	147	.	NC_000913	1196232	0	C	T	bias_e_value=3674790	bias_p_value=0.791699	consensus_score=10.5	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=2/4	major_frequency=8.571e-01	minor_base=C	minor_cov=1/0	new_cov=2/4	polymorphism_frequency=8.571e-01	polymorphism_score=-5.3	prediction=consensus	ref_cov=1/0	total_cov=3/4
RA	148	.	NC_000913	1196245	0	T	C	bias_e_value=3594230	bias_p_value=0.774342	consensus_score=10.1	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=0.953497	major_base=C	major_cov=2/4	major_frequency=8.571e-01	minor_base=T	minor_cov=1/0	new_cov=2/4	polymorphism_frequency=8.571e-01	polymorphism_score=-3.1	prediction=consensus	ref_cov=1/0	total_cov=3/4
RA	149	.	NC_000913	1253002	0	C	T	bias_e_value=3011500	bias_p_value=0.648798	consensus_score=42.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.28985	major_base=T	major_cov=9/8	major_frequency=8.947e-01	minor_base=C	minor_cov=1/1	new_cov=9/8	polymorphism_frequency=8.947e-01	polymorphism_score=-0.9	prediction=consensus	ref_cov=1/1	total_cov=10/9
RA	150	.	NC_000913	1301992	0	A	T	bias_e_value=4641650	bias_p_value=1	consensus_score=81.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=21/10	major_frequency=8.857e-01	minor_base=A	minor_cov=3/1	new_cov=21/10	polymorphism_frequency=8.857e-01	polymorphism_score=0.3	prediction=consensus	ref_cov=3/1	total_cov=25/12
RA	151	.	NC_000913	1306736	0	T	G	bias_e_value=3557900	bias_p_value=0.766516	consensus_score=24.6	fisher_strand_p_value=0.4	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=3/6	major_frequency=9.000e-01	minor_base=C	minor_cov=1/0	new_cov=3/6	polymorphism_frequency=9.000e-01	polymorphism_score=-5.5	prediction=consensus	ref_cov=0/0	total_cov=4/6
RA	152	.	NC_000913	1310770	0	A	G	consensus_score=73.0	frequency=1	major_base=G	major_cov=10/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/13
RA	153	.	NC_000913	1337394	0	A	G	bias_e_value=3735870	bias_p_value=0.804858	consensus_score=50.2	fisher_strand_p_value=0.444444	frequency=1	ks_quality_p_value=1	major_base=G	major_cov=10/7	major_frequency=9.444e-01	minor_base=T	minor_cov=0/1	new_cov=10/7	polymorphism_frequency=9.444e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=10/9
RA	154	.	NC_000913	1357202	0	C	T	bias_e_value=4636160	bias_p_value=0.998817	consensus_score=82.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.951752	major_base=T	major_cov=12/14	major_frequency=9.286e-01	minor_base=C	minor_cov=1/1	new_cov=12/14	polymorphism_frequency=9.286e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/1	total_cov=14/15
RA	155	.	NC_000913	1358859	0	T	C	bias_e_value=4641650	bias_p_value=1	consensus_score=34.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=8/5	major_frequency=9.286e-01	minor_base=A	minor_cov=1/0	new_cov=8/5	polymorphism_frequency=9.286e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/5
RA	156	.	NC_000913	1441038	0	G	A	bias_e_value=708447	bias_p_value=0.152628	consensus_score=43.7	fisher_strand_p_value=0.0350877	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=6/11	major_frequency=8.095e-01	minor_base=T	minor_cov=4/0	new_cov=6/11	polymorphism_frequency=8.095e-01	polymorphism_score=-1.7	prediction=consensus	ref_cov=0/1	total_cov=10/12
RA	157	.	NC_000913	1497385	0	T	C	bias_e_value=2766930	bias_p_value=0.59611	consensus_score=50.2	fisher_strand_p_value=0.263158	frequency=1	ks_quality_p_value=0.948729	major_base=C	major_cov=4/14	major_frequency=9.474e-01	minor_base=T	minor_cov=1/0	new_cov=4/14	polymorphism_frequency=9.474e-01	polymorphism_score=-4.1	prediction=consensus	ref_cov=1/0	total_cov=5/14
RA	158	.	NC_000913	1497386	0	T	.	bias_e_value=1671860	bias_p_value=0.360186	consensus_score=65.5	fisher_strand_p_value=0.263158	frequency=1	ks_quality_p_value=0.430803	major_base=.	major_cov=4/14	major_frequency=9.474e-01	minor_base=T	minor_cov=1/0	new_cov=4/14	polymorphism_frequency=9.474e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=1/0	total_cov=5/14
RA	159	.	NC_000913	1497387	0	C	A	bias_e_value=2842650	bias_p_value=0.612421	consensus_score=54.9	fisher_strand_p_value=0.263158	frequency=1	ks_quality_p_value=0.994169	major_base=A	major_cov=4/14	major_frequency=9.474e-01	minor_base=C	minor_cov=1/0	new_cov=4/14	polymorphism_frequency=9.474e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=5/14
RA	160	.	NC_000913	1497388	0	T	A	bias_e_value=1987320	bias_p_value=0.42815	consensus_score=51.1	fisher_strand_p_value=0.263158	frequency=1	ks_quality_p_value=0.55722	major_base=A	major_cov=4/14	major_frequency=9.474e-01	minor_base=T	minor_cov=1/0	new_cov=4/14	polymorphism_frequency=9.474e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=1/0	total_cov=5/14
RA	161	.	NC_000913	1584092	0	G	A	bias_e_value=3476110	bias_p_value=0.748895	consensus_score=54.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.381255	major_base=A	major_cov=8/13	major_frequency=8.750e-01	minor_base=G	minor_cov=1/2	new_cov=8/13	polymorphism_frequency=8.750e-01	polymorphism_score=2.0	prediction=consensus	ref_cov=1/2	total_cov=10/15
RA	162	.	NC_000913	1629247	0	C	T	bias_e_value=3695480	bias_p_value=0.796155	consensus_score=36.6	fisher_strand_p_value=0.4375	frequency=1	ks_quality_p_value=0.991701	major_base=T	major_cov=9/6	major_frequency=9.375e-01	minor_base=G	minor_cov=0/1	new_cov=9/6	polymorphism_frequency=9.375e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/7
RA	163	.	NC_000913	1643679	0	A	T	bias_e_value=3297010	bias_p_value=0.710309	consensus_score=44.0	fisher_strand_p_value=0.467836	frequency=1	ks_quality_p_value=0.733742	major_base=T	major_cov=4/13	major_frequency=8.947e-01	minor_base=A	minor_cov=1/1	new_cov=4/13	polymorphism_frequency=8.947e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/1	total_cov=5/14
RA	164	.	NC_000913	1652331	0	T	C	bias_e_value=3850220	bias_p_value=0.829494	consensus_score=62.4	fisher_strand_p_value=0.47619	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=9/11	major_frequency=9.091e-01	minor_base=A	minor_cov=2/0	new_cov=9/11	polymorphism_frequency=9.091e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/11
RA	165	.	NC_000913	1667460	0	G	A	bias_e_value=4641650	bias_p_value=1	consensus_score=64.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=13/9	major_frequency=9.565e-01	minor_base=C	minor_cov=1/0	new_cov=13/9	polymorphism_frequency=9.565e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=15/10
RA	166	.	NC_000913	1682459	0	A	G	bias_e_value=2401930	bias_p_value=0.517473	consensus_score=52.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.197269	major_base=G	major_cov=11/10	major_frequency=9.130e-01	minor_base=A	minor_cov=1/1	new_cov=11/10	polymorphism_frequency=9.130e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=1/1	total_cov=12/11
RA	167	.	NC_000913	1748841	0	C	T	bias_e_value=4080210	bias_p_value=0.879042	consensus_score=45.4	fisher_strand_p_value=0.586466	frequency=1	ks_quality_p_value=0.938482	major_base=T	major_cov=10/8	major_frequency=8.571e-01	minor_base=C	minor_cov=1/2	new_cov=10/8	polymorphism_frequency=8.571e-01	polymorphism_score=-1.0	prediction=consensus	ref_cov=1/2	total_cov=11/10
RA	168	.	NC_000913	1767014	0	C	T	bias_e_value=750006	bias_p_value=0.161582	consensus_score=50.7	fisher_strand_p_value=0.550395	frequency=1	ks_quality_p_value=0.0686612	major_base=T	major_cov=8/13	major_frequency=8.750e-01	minor_base=C	minor_cov=2/1	new_cov=8/13	polymorphism_frequency=8.750e-01	polymorphism_score=1.9	prediction=consensus	ref_cov=2/1	total_cov=10/14
RA	169	.	NC_000913	1848300	0	C	T	consensus_score=75.1	frequency=1	major_base=T	major_cov=15/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/9
RA	170	.	NC_000913	1848301	0	C	T	consensus_score=72.3	frequency=1	major_base=T	major_cov=15/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/9
RA	171	.	NC_000913	1849629	0	T	C	bias_e_value=3273000	bias_p_value=0.705136	consensus_score=62.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.338465	major_base=C	major_cov=12/12	major_frequency=9.231e-01	minor_base=T	minor_cov=1/1	new_cov=12/12	polymorphism_frequency=9.231e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/1	total_cov=13/13
RA	172	.	NC_000913	1894839	0	T	C	bias_e_value=3819670	bias_p_value=0.822912	consensus_score=38.4	fisher_strand_p_value=0.582043	frequency=1	ks_quality_p_value=0.803082	major_base=C	major_cov=9/7	major_frequency=8.421e-01	minor_base=T	minor_cov=1/2	new_cov=9/7	polymorphism_frequency=8.421e-01	polymorphism_score=-2.4	prediction=consensus	ref_cov=1/2	total_cov=10/9
RA	173	.	NC_000913	2041278	0	G	A	consensus_score=56.5	frequency=1	major_base=A	major_cov=11/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/8
RA	174	.	NC_000913	2052885	0	G	A	bias_e_value=3522050	bias_p_value=0.758793	consensus_score=49.0	fisher_strand_p_value=0.4	frequency=1	ks_quality_p_value=0.979167	major_base=A	major_cov=12/7	major_frequency=9.500e-01	minor_base=G	minor_cov=0/1	new_cov=12/7	polymorphism_frequency=9.500e-01	polymorphism_score=-5.2	prediction=consensus	ref_cov=0/1	total_cov=12/8
RA	175	.	NC_000913	2104024	0	G	T	consensus_score=29.9	frequency=1	major_base=T	major_cov=3/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=3/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=3/8
RA	176	.	NC_000913	2111259	0	G	.	consensus_score=105.0	frequency=1	major_base=.	major_cov=11/14	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=11/14	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=11/14
RA	177	.	NC_000913	2142598	0	G	A	bias_e_value=3411900	bias_p_value=0.735062	consensus_score=101.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.367183	major_base=A	major_cov=19/13	major_frequency=9.697e-01	minor_base=G	minor_cov=1/0	new_cov=19/13	polymorphism_frequency=9.697e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=1/0	total_cov=20/13
RA	178	.	NC_000913	2155197	0	G	A	bias_e_value=4639360	bias_p_value=0.999507	consensus_score=92.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.968753	major_base=A	major_cov=21/15	major_frequency=8.571e-01	minor_base=G	minor_cov=4/2	new_cov=21/15	polymorphism_frequency=8.571e-01	polymorphism_score=4.6	prediction=consensus	ref_cov=4/2	total_cov=25/17
RA	179	.	NC_000913	2173363	0	C	.	bias_e_value=3735870	bias_p_value=0.804858	consensus_score=25.7	fisher_strand_p_value=0.444444	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=5/3	major_frequency=8.889e-01	minor_base=C	minor_cov=0/1	new_cov=5/3	polymorphism_frequency=8.889e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=0/1	total_cov=5/4
RA	180	.	NC_000913	2173364	0	C	.	bias_e_value=3735870	bias_p_value=0.804858	consensus_score=25.7	fisher_strand_p_value=0.444444	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=5/3	major_frequency=8.889e-01	minor_base=C	minor_cov=0/1	new_cov=5/3	polymorphism_frequency=8.889e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=0/1	total_cov=5/4
RA	181	.	NC_000913	2173448	0	C	T	consensus_score=38.4	frequency=1	major_base=T	major_cov=6/6	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=6/6	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=6/6
RA	182	.	NC_000913	2233609	0	C	T	bias_e_value=1552800	bias_p_value=0.334537	consensus_score=46.6	fisher_strand_p_value=0.352941	frequency=1	ks_quality_p_value=0.288619	major_base=T	major_cov=11/5	major_frequency=9.412e-01	minor_base=C	minor_cov=0/1	new_cov=11/5	polymorphism_frequency=9.412e-01	polymorphism_score=-3.3	prediction=consensus	ref_cov=0/1	total_cov=11/6
RA	183	.	NC_000913	2247134	0	A	C	consensus_score=45.1	frequency=1	major_base=C	major_cov=15/1	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=15/1	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=15/1
RA	184	.	NC_000913	2307733	0	C	T	bias_e_value=3511530	bias_p_value=0.756526	consensus_score=60.7	fisher_strand_p_value=0.602892	frequency=1	ks_quality_p_value=0.645649	major_base=T	major_cov=14/14	major_frequency=8.750e-01	minor_base=C	minor_cov=3/1	new_cov=14/14	polymorphism_frequency=8.750e-01	polymorphism_score=0.6	prediction=consensus	ref_cov=3/1	total_cov=17/15
RA	185	.	NC_000913	2310878	0	A	T	bias_e_value=3890790	bias_p_value=0.838234	consensus_score=32.4	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.488172	major_base=T	major_cov=7/7	major_frequency=8.235e-01	minor_base=A	minor_cov=2/1	new_cov=7/7	polymorphism_frequency=8.235e-01	polymorphism_score=4.1	prediction=consensus	ref_cov=2/1	total_cov=10/8
RA	186	.	NC_000913	2404402	0	G	A	bias_e_value=2454360	bias_p_value=0.528769	consensus_score=87.6	fisher_strand_p_value=0.51954	frequency=1	ks_quality_p_value=0.393241	major_base=A	major_cov=17/11	major_frequency=9.333e-01	minor_base=G	minor_cov=2/0	new_cov=17/11	polymorphism_frequency=9.333e-01	polymorphism_score=-1.3	prediction=consensus	ref_cov=2/0	total_cov=19/11
RA	187	.	NC_000913	2405840	1	.	T	consensus_score=15.8	frequency=1	major_base=T	major_cov=4/3	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=4/3	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=4/3
RA	188	.	NC_000913	2446592	0	C	A	bias_e_value=4641650	bias_p_value=1	consensus_score=33.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=7/11	major_frequency=8.182e-01	minor_base=C	minor_cov=2/2	new_cov=7/11	polymorphism_frequency=8.182e-01	polymorphism_score=-1.3	prediction=consensus	ref_cov=2/2	total_cov=9/13
RA	189	.	NC_000913	2485636	0	A	.	bias_e_value=3602960	bias_p_value=0.776225	consensus_score=39.3	fisher_strand_p_value=0.576471	frequency=1	ks_quality_p_value=0.712528	major_base=.	major_cov=6/8	major_frequency=8.235e-01	minor_base=A	minor_cov=2/1	new_cov=6/8	polymorphism_frequency=8.235e-01	polymorphism_score=7.2	prediction=consensus	ref_cov=2/1	total_cov=8/9
RA	190	.	NC_000913	2485638	0	T	A	bias_e_value=2004650	bias_p_value=0.431884	consensus_score=27.2	fisher_strand_p_value=0.576471	frequency=1	ks_quality_p_value=0.257756	major_base=A	major_cov=6/8	major_frequency=8.235e-01	minor_base=T	minor_cov=2/1	new_cov=6/8	polymorphism_frequency=8.235e-01	polymorphism_score=3.5	prediction=consensus	ref_cov=2/1	total_cov=8/9
RA	191	.	NC_000913	2522369	0	G	A	bias_e_value=4326120	bias_p_value=0.932022	consensus_score=51.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.654713	major_base=A	major_cov=10/9	major_frequency=9.048e-01	minor_base=G	minor_cov=1/1	new_cov=10/9	polymorphism_frequency=9.048e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=1/1	total_cov=11/10
RA	192	.	NC_000913	2587112	0	C	T	bias_e_value=4635280	bias_p_value=0.998627	consensus_score=67.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.948064	major_base=T	major_cov=12/13	major_frequency=9.259e-01	minor_base=C	minor_cov=1/1	new_cov=12/13	polymorphism_frequency=9.259e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=1/1	total_cov=13/14
RA	193	.	NC_000913	2702363	0	G	A	bias_e_value=2704180	bias_p_value=0.58259	consensus_score=65.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.240057	major_base=A	major_cov=9/13	major_frequency=9.565e-01	minor_base=G	minor_cov=0/1	new_cov=9/13	polymorphism_frequency=9.565e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=0/1	total_cov=9/14
RA	194	.	NC_000913	2765411	1	.	G	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=0.1	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=G	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	195	.	NC_000913	2765411	2	.	C	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=0.2	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=C	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=11.0	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	196	.	NC_000913	2765411	3	.	A	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=-0.3	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=A	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=10.7	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	197	.	NC_000913	2765411	4	.	C	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=0.3	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=C	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=10.9	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	198	.	NC_000913	2765411	5	.	T	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=-0.0	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=T	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=10.6	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	199	.	NC_000913	2765411	6	.	A	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=0.1	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=A	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=10.3	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	200	.	NC_000913	2765411	7	.	T	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=-0.6	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=T	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	201	.	NC_000913	2765411	8	.	G	bias_e_value=597468	bias_p_value=0.128719	consensus_reject=SCORE_CUTOFF,FREQUENCY_CUTOFF	consensus_score=-0.1	fisher_strand_p_value=0.166667	frequency=3.333e-01	ks_quality_p_value=0.169013	major_base=.	major_cov=2/4	major_frequency=6.667e-01	minor_base=G	minor_cov=3/0	new_cov=3/0	polymorphism_frequency=3.333e-01	polymorphism_score=11.2	prediction=polymorphism	ref_cov=2/4	total_cov=5/4
RA	202	.	NC_000913	2774947	0	G	A	bias_e_value=4525420	bias_p_value=0.974959	consensus_score=27.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.784723	major_base=A	major_cov=6/5	major_frequency=9.167e-01	minor_base=G	minor_cov=1/0	new_cov=6/5	polymorphism_frequency=9.167e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=1/0	total_cov=7/5
RA	203	.	NC_000913	2867311	0	G	T	bias_e_value=4631930	bias_p_value=0.997905	consensus_score=42.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.935966	major_base=T	major_cov=5/11	major_frequency=9.412e-01	minor_base=G	minor_cov=0/1	new_cov=5/11	polymorphism_frequency=9.412e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=6/12
RA	204	.	NC_000913	2880635	0	T	C	bias_e_value=4629380	bias_p_value=0.997357	consensus_score=60.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.928176	major_base=C	major_cov=13/8	major_frequency=9.130e-01	minor_base=T	minor_cov=1/1	new_cov=13/8	polymorphism_frequency=9.130e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/1	total_cov=14/9
RA	205	.	NC_000913	2926772	0	C	A	bias_e_value=3528620	bias_p_value=0.760207	consensus_score=48.6	fisher_strand_p_value=0.493506	frequency=1	ks_quality_p_value=0.796703	major_base=A	major_cov=11/9	major_frequency=9.091e-01	minor_base=C	minor_cov=2/0	new_cov=11/9	polymorphism_frequency=9.091e-01	polymorphism_score=NA	prediction=consensus	ref_cov=2/0	total_cov=13/9
RA	206	.	NC_000913	2936855	0	T	G	bias_e_value=2749040	bias_p_value=0.592255	consensus_reject=FREQUENCY_CUTOFF	consensus_score=52.9	fisher_strand_p_value=0.285266	frequency=7.222e-01	ks_quality_p_value=0.865503	major_base=G	major_cov=16/10	major_frequency=7.222e-01	minor_base=T	minor_cov=4/6	new_cov=16/10	polymorphism_frequency=7.222e-01	polymorphism_score=12.6	prediction=polymorphism	ref_cov=4/6	total_cov=20/16
RA	207	.	NC_000913	2937210	0	C	T	bias_e_value=3591880	bias_p_value=0.773837	consensus_score=72.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.408078	major_base=T	major_cov=11/16	major_frequency=9.000e-01	minor_base=C	minor_cov=1/2	new_cov=11/16	polymorphism_frequency=9.000e-01	polymorphism_score=1.0	prediction=consensus	ref_cov=1/2	total_cov=12/18
RA	208	.	NC_000913	2938548	0	A	T	bias_e_value=2121710	bias_p_value=0.457103	consensus_score=40.3	fisher_strand_p_value=0.586466	frequency=1	ks_quality_p_value=0.276453	major_base=T	major_cov=10/8	major_frequency=8.571e-01	minor_base=A	minor_cov=1/2	new_cov=10/8	polymorphism_frequency=8.571e-01	polymorphism_score=2.4	prediction=consensus	ref_cov=1/2	total_cov=11/10
RA	209	.	NC_000913	3025601	0	T	.	bias_e_value=3431250	bias_p_value=0.73923	consensus_score=86.4	fisher_strand_p_value=0.478261	frequency=1	ks_quality_p_value=0.776496	major_base=.	major_cov=10/12	major_frequency=9.565e-01	minor_base=T	minor_cov=1/0	new_cov=10/12	polymorphism_frequency=9.565e-01	polymorphism_score=-1.1	prediction=consensus	ref_cov=1/0	total_cov=11/12
RA	210	.	NC_000913	3070858	0	T	G	bias_e_value=2258940	bias_p_value=0.486666	consensus_score=92.3	fisher_strand_p_value=0.195699	frequency=1	ks_quality_p_value=0.91384	major_base=G	major_cov=17/12	major_frequency=9.355e-01	minor_base=T	minor_cov=0/2	new_cov=17/12	polymorphism_frequency=9.355e-01	polymorphism_score=-3.5	prediction=consensus	ref_cov=0/2	total_cov=17/14
RA	211	.	NC_000913	3207549	0	G	.	bias_e_value=3903670	bias_p_value=0.841009	consensus_score=135.1	fisher_strand_p_value=0.492063	frequency=1	ks_quality_p_value=1	major_base=.	major_cov=18/16	major_frequency=9.444e-01	minor_base=G	minor_cov=2/0	new_cov=18/16	polymorphism_frequency=9.444e-01	polymorphism_score=-1.2	prediction=consensus	ref_cov=2/0	total_cov=20/16
RA	212	.	NC_000913	3279276	0	C	G	bias_e_value=4640640	bias_p_value=0.999781	consensus_score=55.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.979167	major_base=G	major_cov=12/7	major_frequency=9.500e-01	minor_base=T	minor_cov=1/0	new_cov=12/7	polymorphism_frequency=9.500e-01	polymorphism_score=-6.1	prediction=consensus	ref_cov=1/0	total_cov=14/7
RA	213	.	NC_000913	3296481	0	G	A	bias_e_value=4597680	bias_p_value=0.990528	consensus_score=93.7	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.865554	major_base=A	major_cov=16/17	major_frequency=9.706e-01	minor_base=G	minor_cov=1/0	new_cov=16/17	polymorphism_frequency=9.706e-01	polymorphism_score=-4.6	prediction=consensus	ref_cov=1/0	total_cov=17/17
RA	214	.	NC_000913	3324965	0	G	T	bias_e_value=3664610	bias_p_value=0.789506	consensus_score=68.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.425993	major_base=T	major_cov=12/12	major_frequency=9.600e-01	minor_base=G	minor_cov=0/1	new_cov=12/12	polymorphism_frequency=9.600e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=0/1	total_cov=13/13
RA	215	.	NC_000913	3326537	0	C	A	bias_e_value=4480030	bias_p_value=0.96518	consensus_score=58.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.747986	major_base=A	major_cov=14/11	major_frequency=9.259e-01	minor_base=C	minor_cov=1/1	new_cov=14/11	polymorphism_frequency=9.259e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/1	total_cov=15/12
RA	216	.	NC_000913	3329743	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=54.8	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=8/9	major_frequency=9.444e-01	minor_base=G	minor_cov=0/1	new_cov=8/9	polymorphism_frequency=9.444e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=8/10
RA	217	.	NC_000913	3388041	0	T	G	bias_e_value=4075050	bias_p_value=0.877932	consensus_score=52.0	fisher_strand_p_value=0.569231	frequency=1	ks_quality_p_value=0.96364	major_base=G	major_cov=10/14	major_frequency=8.889e-01	minor_base=T	minor_cov=2/1	new_cov=10/14	polymorphism_frequency=8.889e-01	polymorphism_score=-2.5	prediction=consensus	ref_cov=2/1	total_cov=12/15
RA	218	.	NC_000913	3411689	0	G	T	bias_e_value=3793710	bias_p_value=0.817318	consensus_score=43.4	fisher_strand_p_value=0.626482	frequency=1	ks_quality_p_value=0.734495	major_base=T	major_cov=12/9	major_frequency=8.400e-01	minor_base=G	minor_cov=3/1	new_cov=12/9	polymorphism_frequency=8.400e-01	polymorphism_score=4.7	prediction=consensus	ref_cov=3/1	total_cov=15/10
RA	219	.	NC_000913	3433900	0	C	T	consensus_score=53.1	frequency=1	major_base=T	major_cov=8/11	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=8/11	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=8/11
RA	220	.	NC_000913	3439485	0	C	T	bias_e_value=2511300	bias_p_value=0.541037	consensus_score=36.6	fisher_strand_p_value=0.428571	frequency=1	ks_quality_p_value=0.494951	major_base=T	major_cov=5/8	major_frequency=9.286e-01	minor_base=C	minor_cov=1/0	new_cov=5/8	polymorphism_frequency=9.286e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=1/0	total_cov=6/8
RA	221	.	NC_000913	3472337	0	G	T	bias_e_value=278683	bias_p_value=0.0600397	consensus_reject=FREQUENCY_CUTOFF	consensus_score=53.1	fisher_strand_p_value=0.720676	frequency=2.564e-01	ks_quality_p_value=0.0150887	major_base=G	major_cov=12/17	major_frequency=7.436e-01	minor_base=T	minor_cov=5/5	new_cov=5/5	polymorphism_frequency=2.564e-01	polymorphism_score=17.3	prediction=polymorphism	ref_cov=12/17	total_cov=17/22
RA	222	.	NC_000913	3474272	0	C	T	bias_e_value=4630800	bias_p_value=0.997663	consensus_reject=FREQUENCY_CUTOFF	consensus_score=32.6	fisher_strand_p_value=1	frequency=7.308e-01	ks_quality_p_value=0.93241	major_base=T	major_cov=12/7	major_frequency=7.308e-01	minor_base=C	minor_cov=4/3	new_cov=12/7	polymorphism_frequency=7.308e-01	polymorphism_score=10.8	prediction=polymorphism	ref_cov=4/3	total_cov=16/11
RA	223	.	NC_000913	3474355	0	G	C	bias_e_value=1555480	bias_p_value=0.335114	consensus_reject=FREQUENCY_CUTOFF	consensus_score=57.8	fisher_strand_p_value=0.690565	frequency=2.286e-01	ks_quality_p_value=0.147877	major_base=G	major_cov=14/13	major_frequency=7.714e-01	minor_base=C	minor_cov=3/5	new_cov=3/5	polymorphism_frequency=2.286e-01	polymorphism_score=23.0	prediction=polymorphism	ref_cov=14/13	total_cov=17/18
RA	224	.	NC_000913	3474424	0	T	G	bias_e_value=3366360	bias_p_value=0.725249	consensus_reject=FREQUENCY_CUTOFF	consensus_score=40.1	fisher_strand_p_value=1	frequency=7.143e-01	ks_quality_p_value=0.357517	major_base=G	major_cov=8/12	major_frequency=7.143e-01	minor_base=T	minor_cov=3/5	new_cov=8/12	polymorphism_frequency=7.143e-01	polymorphism_score=11.8	prediction=polymorphism	ref_cov=3/5	total_cov=11/17
RA	225	.	NC_000913	3486502	0	C	T	bias_e_value=3335220	bias_p_value=0.718542	consensus_score=55.8	fisher_strand_p_value=0.618481	frequency=1	ks_quality_p_value=0.567605	major_base=T	major_cov=12/10	major_frequency=8.148e-01	minor_base=C	minor_cov=4/1	new_cov=12/10	polymorphism_frequency=8.148e-01	polymorphism_score=8.0	prediction=consensus	ref_cov=4/1	total_cov=16/11
RA	226	.	NC_000913	3486538	0	T	C	bias_e_value=1418120	bias_p_value=0.305521	consensus_score=46.1	fisher_strand_p_value=0.672469	frequency=1	ks_quality_p_value=0.133098	major_base=C	major_cov=13/11	major_frequency=8.000e-01	minor_base=T	minor_cov=4/2	new_cov=13/11	polymorphism_frequency=8.000e-01	polymorphism_score=10.1	prediction=consensus	ref_cov=4/2	total_cov=17/13
RA	227	.	NC_000913	3511466	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=108.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=21/15	major_frequency=9.730e-01	minor_base=A	minor_cov=1/0	new_cov=21/15	polymorphism_frequency=9.730e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/15
RA	228	.	NC_000913	3555047	0	G	C	bias_e_value=2689440	bias_p_value=0.579415	consensus_score=71.7	fisher_strand_p_value=0.487179	frequency=1	ks_quality_p_value=0.488197	major_base=C	major_cov=13/12	major_frequency=9.259e-01	minor_base=G	minor_cov=2/0	new_cov=13/12	polymorphism_frequency=9.259e-01	polymorphism_score=0.3	prediction=consensus	ref_cov=2/0	total_cov=15/13
RA	229	.	NC_000913	3560362	0	G	A	bias_e_value=4348700	bias_p_value=0.936887	consensus_score=61.2	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.666445	major_base=A	major_cov=11/10	major_frequency=9.130e-01	minor_base=G	minor_cov=1/1	new_cov=11/10	polymorphism_frequency=9.130e-01	polymorphism_score=-1.3	prediction=consensus	ref_cov=1/1	total_cov=12/12
RA	230	.	NC_000913	3560455	1	.	G	consensus_score=62.1	frequency=1	major_base=G	major_cov=10/9	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/9	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/9
RA	231	.	NC_000913	3647428	0	C	T	bias_e_value=3505080	bias_p_value=0.755136	consensus_score=56.4	fisher_strand_p_value=0.48	frequency=1	ks_quality_p_value=0.807887	major_base=T	major_cov=13/11	major_frequency=9.600e-01	minor_base=G	minor_cov=0/1	new_cov=13/11	polymorphism_frequency=9.600e-01	polymorphism_score=-6.0	prediction=consensus	ref_cov=0/1	total_cov=14/13
RA	232	.	NC_000913	3707947	0	C	A	bias_e_value=4598890	bias_p_value=0.990787	consensus_score=60.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.867368	major_base=A	major_cov=10/12	major_frequency=9.565e-01	minor_base=C	minor_cov=0/1	new_cov=10/12	polymorphism_frequency=9.565e-01	polymorphism_score=-4.0	prediction=consensus	ref_cov=0/1	total_cov=11/13
RA	233	.	NC_000913	3719429	0	G	A	consensus_score=36.5	frequency=1	major_base=A	major_cov=7/8	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/8	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/8
RA	234	.	NC_000913	3725176	0	T	G	consensus_score=80.7	frequency=1	major_base=G	major_cov=14/17	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=14/17	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=14/17
RA	235	.	NC_000913	3729440	0	C	T	bias_e_value=4333510	bias_p_value=0.933613	consensus_reject=FREQUENCY_CUTOFF	consensus_score=23.1	fisher_strand_p_value=0.692449	frequency=6.538e-01	ks_quality_p_value=0.950966	major_base=T	major_cov=6/11	major_frequency=6.538e-01	minor_base=C	minor_cov=4/5	new_cov=6/11	polymorphism_frequency=6.538e-01	polymorphism_score=18.9	prediction=polymorphism	ref_cov=4/5	total_cov=10/16
RA	236	.	NC_000913	3729441	0	C	T	bias_e_value=4641470	bias_p_value=0.999961	consensus_reject=FREQUENCY_CUTOFF	consensus_score=20.6	fisher_strand_p_value=1	frequency=6.400e-01	ks_quality_p_value=0.991151	major_base=T	major_cov=6/10	major_frequency=6.400e-01	minor_base=C	minor_cov=4/5	new_cov=6/10	polymorphism_frequency=6.400e-01	polymorphism_score=18.7	prediction=polymorphism	ref_cov=4/5	total_cov=10/16
RA	237	.	NC_000913	3730560	0	C	T	bias_e_value=3638080	bias_p_value=0.78379	consensus_score=88.0	fisher_strand_p_value=0.419355	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=18/12	major_frequency=9.677e-01	minor_base=G	minor_cov=0/1	new_cov=18/12	polymorphism_frequency=9.677e-01	polymorphism_score=NA	prediction=consensus	ref_cov=1/0	total_cov=19/14
RA	238	.	NC_000913	3770539	0	C	T	bias_e_value=157872	bias_p_value=0.0340119	consensus_score=36.1	fisher_strand_p_value=0.0210526	frequency=1	ks_quality_p_value=0.260295	major_base=T	major_cov=5/12	major_frequency=8.095e-01	minor_base=C	minor_cov=4/0	new_cov=5/12	polymorphism_frequency=8.095e-01	polymorphism_score=5.3	prediction=consensus	ref_cov=4/0	total_cov=9/12
RA	239	.	NC_000913	3773173	0	G	.	bias_e_value=2812470	bias_p_value=0.605919	consensus_score=114.0	fisher_strand_p_value=0.286988	frequency=1	ks_quality_p_value=0.894839	major_base=.	major_cov=12/20	major_frequency=8.889e-01	minor_base=G	minor_cov=3/1	new_cov=12/20	polymorphism_frequency=8.889e-01	polymorphism_score=8.5	prediction=consensus	ref_cov=3/1	total_cov=15/21
RA	240	.	NC_000913	3773176	0	C	T	bias_e_value=2930490	bias_p_value=0.631346	consensus_score=102.3	fisher_strand_p_value=0.405405	frequency=1	ks_quality_p_value=0.68087	major_base=T	major_cov=14/22	major_frequency=9.730e-01	minor_base=C	minor_cov=1/0	new_cov=14/22	polymorphism_frequency=9.730e-01	polymorphism_score=-4.2	prediction=consensus	ref_cov=1/0	total_cov=16/22
RA	241	.	NC_000913	3815883	1	.	C	bias_e_value=2454710	bias_p_value=0.528845	consensus_score=78.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.204352	major_base=C	major_cov=18/8	major_frequency=9.286e-01	minor_base=.	minor_cov=1/1	new_cov=18/8	polymorphism_frequency=9.286e-01	polymorphism_score=1.0	prediction=consensus	ref_cov=1/1	total_cov=19/9
RA	242	.	NC_000913	3925834	0	C	T	bias_e_value=4296240	bias_p_value=0.925583	consensus_score=34.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.639909	major_base=T	major_cov=8/6	major_frequency=8.750e-01	minor_base=C	minor_cov=1/1	new_cov=8/6	polymorphism_frequency=8.750e-01	polymorphism_score=-0.4	prediction=consensus	ref_cov=1/1	total_cov=9/7
RA	243	.	NC_000913	3926991	0	G	A	bias_e_value=3435110	bias_p_value=0.740061	consensus_score=50.6	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.372207	major_base=A	major_cov=8/10	major_frequency=9.474e-01	minor_base=G	minor_cov=0/1	new_cov=8/10	polymorphism_frequency=9.474e-01	polymorphism_score=-3.6	prediction=consensus	ref_cov=0/1	total_cov=8/11
RA	244	.	NC_000913	3966530	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=61.3	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=12/9	major_frequency=8.750e-01	minor_base=C	minor_cov=2/1	new_cov=12/9	polymorphism_frequency=8.750e-01	polymorphism_score=-2.2	prediction=consensus	ref_cov=2/1	total_cov=14/10
RA	245	.	NC_000913	3966531	0	C	T	bias_e_value=3905940	bias_p_value=0.841498	consensus_score=56.5	fisher_strand_p_value=0.492754	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=12/10	major_frequency=9.167e-01	minor_base=C	minor_cov=2/0	new_cov=12/10	polymorphism_frequency=9.167e-01	polymorphism_score=-3.2	prediction=consensus	ref_cov=2/0	total_cov=14/10
RA	246	.	NC_000913	4000592	0	C	A	bias_e_value=3225780	bias_p_value=0.694963	consensus_reject=FREQUENCY_CUTOFF	consensus_score=82.4	fisher_strand_p_value=1	frequency=2.000e-01	ks_quality_p_value=0.329193	major_base=C	major_cov=17/19	major_frequency=8.000e-01	minor_base=A	minor_cov=4/5	new_cov=4/5	polymorphism_frequency=2.000e-01	polymorphism_score=14.8	prediction=polymorphism	ref_cov=17/19	total_cov=21/24
RA	247	.	NC_000913	4000594	0	C	A	bias_e_value=2859660	bias_p_value=0.616088	consensus_reject=FREQUENCY_CUTOFF	consensus_score=86.0	fisher_strand_p_value=0.734777	frequency=2.174e-01	ks_quality_p_value=0.359795	major_base=C	major_cov=17/19	major_frequency=7.826e-01	minor_base=A	minor_cov=4/6	new_cov=4/6	polymorphism_frequency=2.174e-01	polymorphism_score=16.8	prediction=polymorphism	ref_cov=17/19	total_cov=21/25
RA	248	.	NC_000913	4003502	0	G	T	bias_e_value=4641650	bias_p_value=1	consensus_score=40.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=6/11	major_frequency=9.444e-01	minor_base=G	minor_cov=0/1	new_cov=6/11	polymorphism_frequency=9.444e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=6/12
RA	249	.	NC_000913	4037496	0	A	T	bias_e_value=4639790	bias_p_value=0.9996	consensus_reject=FREQUENCY_CUTOFF	consensus_score=24.3	fisher_strand_p_value=1	frequency=7.143e-01	ks_quality_p_value=0.971833	major_base=T	major_cov=9/11	major_frequency=7.143e-01	minor_base=A	minor_cov=3/5	new_cov=9/11	polymorphism_frequency=7.143e-01	polymorphism_score=14.1	prediction=polymorphism	ref_cov=3/5	total_cov=13/16
RA	250	.	NC_000913	4133311	0	G	A	bias_e_value=4604830	bias_p_value=0.992067	consensus_score=54.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.87671	major_base=A	major_cov=9/10	major_frequency=9.500e-01	minor_base=G	minor_cov=0/1	new_cov=9/10	polymorphism_frequency=9.500e-01	polymorphism_score=-3.8	prediction=consensus	ref_cov=0/1	total_cov=9/11
RA	251	.	NC_000913	4150418	0	A	G	bias_e_value=4296240	bias_p_value=0.925583	consensus_score=29.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.639909	major_base=G	major_cov=8/6	major_frequency=8.750e-01	minor_base=A	minor_cov=1/1	new_cov=8/6	polymorphism_frequency=8.750e-01	polymorphism_score=-2.4	prediction=consensus	ref_cov=1/1	total_cov=9/8
RA	252	.	NC_000913	4193996	0	T	G	bias_e_value=4640310	bias_p_value=0.999711	consensus_score=90.5	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.976049	major_base=G	major_cov=21/9	major_frequency=9.091e-01	minor_base=T	minor_cov=2/1	new_cov=21/9	polymorphism_frequency=9.091e-01	polymorphism_score=-1.8	prediction=consensus	ref_cov=2/1	total_cov=24/10
RA	253	.	NC_000913	4217310	0	A	G	bias_e_value=3525220	bias_p_value=0.759476	consensus_score=76.0	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.392396	major_base=G	major_cov=15/14	major_frequency=9.355e-01	minor_base=A	minor_cov=1/1	new_cov=15/14	polymorphism_frequency=9.355e-01	polymorphism_score=-1.6	prediction=consensus	ref_cov=1/1	total_cov=16/15
RA	254	.	NC_000913	4223638	0	T	C	bias_e_value=3408930	bias_p_value=0.734421	consensus_score=43.9	fisher_strand_p_value=0.403509	frequency=1	ks_quality_p_value=0.908393	major_base=C	major_cov=2/15	major_frequency=8.500e-01	minor_base=T	minor_cov=1/2	new_cov=2/15	polymorphism_frequency=8.500e-01	polymorphism_score=-0.3	prediction=consensus	ref_cov=1/2	total_cov=3/17
RA	255	.	NC_000913	4296380	1	.	C	consensus_score=56.9	frequency=1	major_base=C	major_cov=7/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/13
RA	256	.	NC_000913	4296380	2	.	G	consensus_score=54.7	frequency=1	major_base=G	major_cov=7/13	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/13	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/13
RA	257	.	NC_000913	4325644	0	C	T	consensus_score=109.6	frequency=1	major_base=T	major_cov=22/15	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=22/15	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=22/15
RA	258	.	NC_000913	4331890	0	C	T	bias_e_value=1133280	bias_p_value=0.244155	consensus_score=44.1	fisher_strand_p_value=0.3	frequency=1	ks_quality_p_value=0.218482	major_base=T	major_cov=5/14	major_frequency=9.500e-01	minor_base=C	minor_cov=1/0	new_cov=5/14	polymorphism_frequency=9.500e-01	polymorphism_score=-3.7	prediction=consensus	ref_cov=1/0	total_cov=6/14
RA	259	.	NC_000913	4423825	0	C	T	bias_e_value=2654710	bias_p_value=0.571933	consensus_reject=FREQUENCY_CUTOFF	consensus_score=40.1	fisher_strand_p_value=0.453315	frequency=2.812e-01	ks_quality_p_value=0.513262	major_base=C	major_cov=9/14	major_frequency=7.188e-01	minor_base=T	minor_cov=5/4	new_cov=5/4	polymorphism_frequency=2.812e-01	polymorphism_score=17.0	prediction=polymorphism	ref_cov=9/14	total_cov=15/19
RA	260	.	NC_000913	4437890	0	C	T	bias_e_value=4001740	bias_p_value=0.862137	consensus_score=34.1	fisher_strand_p_value=0.52322	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=11/5	major_frequency=8.421e-01	minor_base=C	minor_cov=1/2	new_cov=11/5	polymorphism_frequency=8.421e-01	polymorphism_score=-0.8	prediction=consensus	ref_cov=1/2	total_cov=12/8
RA	261	.	NC_000913	4473900	0	C	T	bias_e_value=3968420	bias_p_value=0.854959	consensus_score=80.4	fisher_strand_p_value=0.512315	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=16/11	major_frequency=9.310e-01	minor_base=C	minor_cov=2/0	new_cov=16/11	polymorphism_frequency=9.310e-01	polymorphism_score=-5.7	prediction=consensus	ref_cov=2/0	total_cov=18/11
RA	262	.	NC_000913	4475493	0	T	C	bias_e_value=3491080	bias_p_value=0.75212	consensus_score=36.9	fisher_strand_p_value=0.384615	frequency=1	ks_quality_p_value=1	major_base=C	major_cov=4/8	major_frequency=9.231e-01	minor_base=A	minor_cov=1/0	new_cov=4/8	polymorphism_frequency=9.231e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=5/8
RA	263	.	NC_000913	4476605	0	G	A	consensus_score=26.0	frequency=1	major_base=A	major_cov=7/5	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=7/5	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=7/5
RA	264	.	NC_000913	4489016	0	C	T	bias_e_value=4641650	bias_p_value=1	consensus_score=79.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=1	major_base=T	major_cov=13/13	major_frequency=9.630e-01	minor_base=C	minor_cov=0/1	new_cov=13/13	polymorphism_frequency=9.630e-01	polymorphism_score=NA	prediction=consensus	ref_cov=0/1	total_cov=13/14
RA	265	.	NC_000913	4510238	0	T	G	consensus_score=52.5	frequency=1	major_base=G	major_cov=9/12	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=9/12	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=9/12
RA	266	.	NC_000913	4532409	0	T	G	bias_e_value=1967380	bias_p_value=0.423854	consensus_score=161.9	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.144408	major_base=G	major_cov=26/23	major_frequency=9.423e-01	minor_base=T	minor_cov=2/1	new_cov=26/23	polymorphism_frequency=9.423e-01	polymorphism_score=-0.9	prediction=consensus	ref_cov=2/1	total_cov=28/24
RA	267	.	NC_000913	4546601	0	C	T	bias_e_value=3833780	bias_p_value=0.825952	consensus_score=88.1	fisher_strand_p_value=1	frequency=1	ks_quality_p_value=0.471448	major_base=T	major_cov=17/12	major_frequency=9.355e-01	minor_base=C	minor_cov=1/1	new_cov=17/12	polymorphism_frequency=9.355e-01	polymorphism_score=-1.3	prediction=consensus	ref_cov=1/1	total_cov=18/13
RA	268	.	NC_000913	4620610	0	G	A	bias_e_value=3776280	bias_p_value=0.813563	consensus_score=59.5	fisher_strand_p_value=0.613187	frequency=1	ks_quality_p_value=0.742584	major_base=A	major_cov=11/13	major_frequency=8.571e-01	minor_base=G	minor_cov=1/3	new_cov=11/13	polymorphism_frequency=8.571e-01	polymorphism_score=4.6	prediction=consensus	ref_cov=1/3	total_cov=12/16
RA	269	.	NC_000913	4636925	0	G	C	consensus_score=91.4	frequency=1	major_base=C	major_cov=10/20	major_frequency=1.000e+00	minor_base=N	minor_cov=0/0	new_cov=10/20	polymorphism_frequency=1.000e+00	polymorphism_score=NA	prediction=consensus	ref_cov=0/0	total_cov=10/20
RA	270	.	NC_000913	4638240	0	G	A	bias_e_value=3474750	bias_p_value=0.748602	consensus_score=64.6	fisher_strand_p_value=0.380952	frequency=1	ks_quality_p_value=1	major_base=A	major_cov=13/7	major_frequency=9.524e-01	minor_base=G	minor_cov=0/1	new_cov=13/7	polymorphism_frequency=9.524e-01	polymorphism_score=-4.3	prediction=consensus	ref_cov=0/1	total_cov=13/8
MC	271	.	NC_000913	256233	258988	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=2	right_outside_cov=4
MC	272	.	NC_000913	259235	259895	0	0	left_inside_cov=3	left_outside_cov=5	right_inside_cov=3	right_outside_cov=5
MC	273	.	NC_000913	260009	260910	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	274	.	NC_000913	262410	263243	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	275	.	NC_000913	263560	265588	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	276	.	NC_000913	265878	267077	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	277	.	NC_000913	267186	269574	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=2	right_outside_cov=4
MC	278	.	NC_000913	269682	270113	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	279	.	NC_000913	271718	272688	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	280	.	NC_000913	272816	273685	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	281	.	NC_000913	275312	276215	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	282	.	NC_000913	276605	277761	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=5
MC	283	.	NC_000913	277971	278901	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	284	.	NC_000913	282540	283266	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	285	.	NC_000913	283882	284032	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	286	.	NC_000913	284665	285446	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	287	.	NC_000913	286815	287384	0	0	left_inside_cov=3	left_outside_cov=5	right_inside_cov=3	right_outside_cov=4
MC	288	.	NC_000913	287635	288870	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=5
MC	289	.	NC_000913	288966	289432	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	290	.	NC_000913	289967	290553	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	291	.	NC_000913	292726	293738	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	292	.	NC_000913	293926	295309	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	293	.	NC_000913	295373	359507	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=2	right_outside_cov=4
MC	294	.	NC_000913	366181	366273	0	0	left_inside_cov=0	left_outside_cov=18	right_inside_cov=0	right_outside_cov=19
MC	295	.	NC_000913	1196277	1197245	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	296	.	NC_000913	1197275	1200889	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	297	.	NC_000913	1201172	1202662	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	298	.	NC_000913	1203275	1204813	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=2	right_outside_cov=4
MC	299	.	NC_000913	1205675	1207502	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	300	.	NC_000913	1207679	1208506	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	301	.	NC_000913	1208550	1211116	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=0	right_outside_cov=4
MC	302	.	NC_000913	1211267	1211502	0	0	left_inside_cov=1	left_outside_cov=5	right_inside_cov=3	right_outside_cov=4
MC	303	.	NC_000913	1299499	1300697	1197	0	left_inside_cov=0	left_outside_cov=18	right_inside_cov=1	right_outside_cov=19
MC	304	.	NC_000913	1978503	1979278	0	0	left_inside_cov=0	left_outside_cov=10	right_inside_cov=0	right_outside_cov=10
MC	305	.	NC_000913	2558699	2561191	0	0	left_inside_cov=3	left_outside_cov=29	right_inside_cov=3	right_outside_cov=4
MC	306	.	NC_000913	2561826	2562747	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	307	.	NC_000913	2563017	2565027	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	308	.	NC_000913	2565160	2565488	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=2	right_outside_cov=28
MC	309	.	NC_000913	2822736	2822974	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	310	.	NC_000913	2823684	2824866	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	311	.	NC_000913	2825527	2826747	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=5
MC	312	.	NC_000913	2826996	2827461	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	313	.	NC_000913	2827587	2828063	0	0	left_inside_cov=2	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	314	.	NC_000913	2828260	2828614	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=5
MC	315	.	NC_000913	2829291	2829585	0	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=1	right_outside_cov=5
MC	316	.	NC_000913	3423872	3424432	361	194	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
MC	317	.	NC_000913	4035397	4036875	1478	0	left_inside_cov=3	left_outside_cov=4	right_inside_cov=3	right_outside_cov=4
JC	318	.	NC_000913	1	1	NC_000913	4641652	-1	0	alignment_overlap=0	coverage_minus=5	coverage_plus=13	flanking_left=251	flanking_right=251	frequency=1	ignore=CIRCULAR_CHROMOSOME	junction_possible_overlap_registers=243	key=NC_000913__1__1__NC_000913__4641652__-1__0____251__251__0__0	max_left=236	max_left_minus=191	max_left_plus=236	max_min_left=101	max_min_left_minus=96	max_min_left_plus=101	max_min_right=108	max_min_right_minus=108	max_min_right_plus=31	max_pos_hash_score=486	max_right=247	max_right_minus=210	max_right_plus=247	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.78	new_junction_read_count=20	polymorphism_frequency=1.000e+00	pos_hash_score=16	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=243	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=18
JC	319	.	NC_000913	256107	-1	NC_000913	371382	1	0	alignment_overlap=8	coverage_minus=6	coverage_plus=9	flanking_left=251	flanking_right=251	frequency=5.777e-01	junction_possible_overlap_registers=235	key=NC_000913__256107__-1__NC_000913__371374__1__8____251__251__0__0	max_left=219	max_left_minus=219	max_left_plus=172	max_min_left=98	max_min_left_minus=45	max_min_left_plus=98	max_min_right=94	max_min_right_minus=47	max_min_right_plus=94	max_pos_hash_score=470	max_right=214	max_right_minus=204	max_right_plus=214	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.61	new_junction_read_count=15	polymorphism_frequency=5.777e-01	pos_hash_score=14	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.08	side_1_overlap=8	side_1_possible_overlap_registers=243	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.81	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=20	side_2_redundant=0	total_non_overlap_reads=15
JC	320	.	NC_000913	257908	1	NC_000913	1302240	-1	0	alignment_overlap=0	coverage_minus=2	coverage_plus=1	flanking_left=251	flanking_right=251	frequency=8.571e-02	junction_possible_overlap_registers=243	key=NC_000913__257908__1__NC_000913__1302240__-1__0____251__251__1__0	max_left=139	max_left_minus=96	max_left_plus=139	max_min_left=96	max_min_left_minus=96	max_min_left_plus=0	max_min_right=112	max_min_right_minus=0	max_min_right_plus=112	max_pos_hash_score=486	max_right=200	max_right_minus=200	max_right_plus=112	neg_log10_pos_hash_p_value=2.8	new_junction_coverage=0.12	new_junction_read_count=3	polymorphism_frequency=8.571e-02	pos_hash_score=3	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.25	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=32	side_2_redundant=0	total_non_overlap_reads=3
JC	321	.	NC_000913	258675	-1	NC_000913	1301058	-1	0	alignment_overlap=0	coverage_minus=9	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__258675__-1__NC_000913__1301058__-1__0____251__251__1__0	max_left=247	max_left_minus=247	max_left_plus=229	max_min_left=118	max_min_left_minus=106	max_min_left_plus=118	max_min_right=111	max_min_right_minus=97	max_min_right_plus=111	max_pos_hash_score=486	max_right=205	max_right_minus=204	max_right_plus=205	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.78	new_junction_read_count=20	polymorphism_frequency=9.059e-01	pos_hash_score=20	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.08	side_2_overlap=0	side_2_possible_overlap_registers=234	side_2_read_count=2	side_2_redundant=0	total_non_overlap_reads=20
JC	322	.	NC_000913	366180	-1	NC_000913	366274	1	0	alignment_overlap=0	coverage_minus=8	coverage_plus=10	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__366180__-1__NC_000913__366274__1__0____251__251__0__0	max_left=249	max_left_minus=249	max_left_plus=238	max_min_left=104	max_min_left_minus=104	max_min_left_plus=66	max_min_right=117	max_min_right_minus=111	max_min_right_plus=117	max_pos_hash_score=486	max_right=223	max_right_minus=169	max_right_plus=223	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.70	new_junction_read_count=18	polymorphism_frequency=1.000e+00	pos_hash_score=17	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=243	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=18
JC	323	.	NC_000913	381260	1	NC_000913	382183	-1	0	alignment_overlap=0	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=243	key=NC_000913__381260__1__NC_000913__382183__-1__0____251__251__1__1	max_left=239	max_left_minus=239	max_left_plus=137	max_min_left=100	max_min_left_minus=66	max_min_left_plus=100	max_min_right=113	max_min_right_minus=67	max_min_right_plus=113	max_pos_hash_score=486	max_right=184	max_right_minus=184	max_right_plus=147	neg_log10_pos_hash_p_value=2.1	new_junction_coverage=0.20	new_junction_read_count=5	polymorphism_frequency=NA	pos_hash_score=5	prediction=unknown	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=5
JC	324	.	NC_000913	381260	1	NC_000913	886412	1	0	alignment_overlap=0	coverage_minus=16	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__381260__1__NC_000913__886412__1__0____251__251__1__0	max_left=238	max_left_minus=238	max_left_plus=238	max_min_left=94	max_min_left_minus=94	max_min_left_plus=0	max_min_right=100	max_min_right_minus=100	max_min_right_plus=33	max_pos_hash_score=486	max_right=226	max_right_minus=226	max_right_plus=33	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.70	new_junction_read_count=18	polymorphism_frequency=9.463e-01	pos_hash_score=17	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=238	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=18
JC	325	.	NC_000913	382590	-1	NC_000913	886416	-1	0	alignment_overlap=0	coverage_minus=16	coverage_plus=12	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__382590__-1__NC_000913__886416__-1__0____251__251__1__0	max_left=241	max_left_minus=226	max_left_plus=241	max_min_left=118	max_min_left_minus=99	max_min_left_plus=118	max_min_right=120	max_min_right_minus=120	max_min_right_plus=111	max_pos_hash_score=486	max_right=250	max_right_minus=250	max_right_plus=235	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.13	new_junction_read_count=29	polymorphism_frequency=9.660e-01	pos_hash_score=28	prediction=consensus	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=238	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=28
JC	326	.	NC_000913	577820	1	NC_000913	1469240	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.111e-01	junction_possible_overlap_registers=242	key=NC_000913__577819__1__NC_000913__1469240__-1__1____251__251__0__1	max_left=178	max_left_minus=178	max_left_plus=140	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=117	max_min_right_minus=70	max_min_right_plus=117	max_pos_hash_score=484	max_right=117	max_right_minus=70	max_right_plus=117	neg_log10_pos_hash_p_value=2.8	new_junction_coverage=0.12	new_junction_read_count=3	polymorphism_frequency=1.111e-01	pos_hash_score=3	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.94	side_1_overlap=0	side_1_possible_overlap_registers=242	side_1_read_count=24	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=3
JC	327	.	NC_000913	676358	1	NC_000913	689045	-1	0	alignment_overlap=0	coverage_minus=7	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=3.333e-01	junction_possible_overlap_registers=243	key=NC_000913__676358__1__NC_000913__689045__-1__0____251__251__0__1	max_left=210	max_left_minus=88	max_left_plus=210	max_min_left=88	max_min_left_minus=88	max_min_left_plus=49	max_min_right=40	max_min_right_minus=0	max_min_right_plus=40	max_pos_hash_score=486	max_right=250	max_right_minus=236	max_right_plus=250	neg_log10_pos_hash_p_value=1.1	new_junction_coverage=0.39	new_junction_read_count=10	polymorphism_frequency=3.333e-01	pos_hash_score=10	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.78	side_1_overlap=0	side_1_possible_overlap_registers=243	side_1_read_count=20	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=10
JC	328	.	NC_000913	1223636	1	NC_000913	1469240	-1	0	alignment_overlap=0	coverage_minus=9	coverage_plus=13	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__1223636__1__NC_000913__1469240__-1__0____251__251__0__1	max_left=245	max_left_minus=218	max_left_plus=245	max_min_left=111	max_min_left_minus=109	max_min_left_plus=111	max_min_right=120	max_min_right_minus=120	max_min_right_plus=92	max_pos_hash_score=486	max_right=236	max_right_minus=199	max_right_plus=236	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.94	new_junction_read_count=24	polymorphism_frequency=8.546e-01	pos_hash_score=20	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.16	side_1_overlap=0	side_1_possible_overlap_registers=238	side_1_read_count=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=22
JC	329	.	NC_000913	1223640	-1	NC_000913	1467910	1	0	alignment_overlap=1	coverage_minus=9	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__1223641__-1__NC_000913__1467910__1__1____251__251__0__1	max_left=240	max_left_minus=240	max_left_plus=216	max_min_left=117	max_min_left_minus=71	max_min_left_plus=117	max_min_right=123	max_min_right_minus=78	max_min_right_plus=123	max_pos_hash_score=484	max_right=234	max_right_minus=197	max_right_plus=234	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.86	new_junction_read_count=22	polymorphism_frequency=8.434e-01	pos_hash_score=20	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.16	side_1_overlap=0	side_1_possible_overlap_registers=237	side_1_read_count=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=20
JC	330	.	NC_000913	1299498	-1	NC_000913	1300698	1	0	alignment_overlap=4	coverage_minus=12	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=239	key=NC_000913__1299498__-1__NC_000913__1300694__1__4____251__251__0__0	max_left=245	max_left_minus=245	max_left_plus=208	max_min_left=121	max_min_left_minus=121	max_min_left_plus=59	max_min_right=115	max_min_right_minus=115	max_min_right_plus=61	max_pos_hash_score=478	max_right=239	max_right_minus=224	max_right_plus=239	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.71	new_junction_read_count=18	polymorphism_frequency=9.730e-01	pos_hash_score=18	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=4	side_1_possible_overlap_registers=243	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=18
JC	331	.	NC_000913	1301050	1	NC_000913	1978503	1	0	alignment_overlap=0	coverage_minus=10	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__1301050__1__NC_000913__1978503__1__0____251__251__0__1	max_left=244	max_left_minus=125	max_left_plus=244	max_min_left=102	max_min_left_minus=102	max_min_left_plus=51	max_min_right=124	max_min_right_minus=124	max_min_right_plus=115	max_pos_hash_score=486	max_right=239	max_right_minus=239	max_right_plus=200	neg_log10_pos_hash_p_value=0.5	new_junction_coverage=0.63	new_junction_read_count=16	polymorphism_frequency=8.851e-01	pos_hash_score=16	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.08	side_1_overlap=0	side_1_possible_overlap_registers=234	side_1_read_count=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=16
JC	332	.	NC_000913	1469240	-1	NC_000913	1590540	-1	0	alignment_overlap=0	coverage_minus=14	coverage_plus=13	flanking_left=251	flanking_right=251	frequency=7.941e-01	junction_possible_overlap_registers=243	key=NC_000913__1469240__-1__NC_000913__1590540__-1__0____251__251__1__0	max_left=249	max_left_minus=249	max_left_plus=241	max_min_left=125	max_min_left_minus=125	max_min_left_plus=89	max_min_right=119	max_min_right_minus=100	max_min_right_plus=119	max_pos_hash_score=486	max_right=245	max_right_minus=237	max_right_plus=245	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.05	new_junction_read_count=27	polymorphism_frequency=7.941e-01	pos_hash_score=27	prediction=polymorphism	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.27	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=7	side_2_redundant=0	total_non_overlap_reads=27
JC	333	.	NC_000913	1590536	1	NC_000913	1651548	-1	0	alignment_overlap=2	coverage_minus=4	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=4.286e-01	junction_possible_overlap_registers=241	key=NC_000913__1590534__1__NC_000913__1651548__-1__2____251__251__0__1	max_left=191	max_left_minus=191	max_left_plus=99	max_min_left=107	max_min_left_minus=107	max_min_left_plus=99	max_min_right=116	max_min_right_minus=116	max_min_right_plus=0	max_pos_hash_score=482	max_right=235	max_right_minus=235	max_right_plus=199	neg_log10_pos_hash_p_value=1.9	new_junction_coverage=0.24	new_junction_read_count=6	polymorphism_frequency=4.286e-01	pos_hash_score=6	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.32	side_1_overlap=0	side_1_possible_overlap_registers=241	side_1_read_count=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=2	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=6
JC	334	.	NC_000913	1651548	-1	NC_000913	1652627	-1	0	alignment_overlap=0	coverage_minus=9	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=7.967e-01	junction_possible_overlap_registers=243	key=NC_000913__1651548__-1__NC_000913__1652627__-1__0____251__251__1__0	max_left=246	max_left_minus=244	max_left_plus=246	max_min_left=117	max_min_left_minus=117	max_min_left_plus=32	max_min_right=118	max_min_right_minus=98	max_min_right_plus=118	max_pos_hash_score=486	max_right=242	max_right_minus=242	max_right_plus=239	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.78	new_junction_read_count=20	polymorphism_frequency=7.967e-01	pos_hash_score=20	prediction=polymorphism	read_count_offset=5	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.20	side_2_overlap=0	side_2_possible_overlap_registers=238	side_2_read_count=5	side_2_redundant=0	total_non_overlap_reads=20
JC	335	.	NC_000913	1652623	1	NC_000913	2070271	-1	0	alignment_overlap=1	coverage_minus=6	coverage_plus=6	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__1652622__1__NC_000913__2070271__-1__1____251__251__0__1	max_left=241	max_left_minus=217	max_left_plus=241	max_min_left=80	max_min_left_minus=80	max_min_left_plus=80	max_min_right=88	max_min_right_minus=88	max_min_right_plus=46	max_pos_hash_score=484	max_right=231	max_right_minus=231	max_right_plus=191	neg_log10_pos_hash_p_value=0.9	new_junction_coverage=0.59	new_junction_read_count=15	polymorphism_frequency=8.304e-01	pos_hash_score=12	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.12	side_1_overlap=0	side_1_possible_overlap_registers=237	side_1_read_count=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=12
JC	336	.	NC_000913	1676530	-1	NC_000913	1677140	1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=8.522e-02	junction_possible_overlap_registers=239	key=NC_000913__1676530__-1__NC_000913__1677136__1__4____251__251__0__0	max_left=99	max_left_minus=99	max_left_plus=99	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=62	max_min_right_minus=62	max_min_right_plus=62	max_pos_hash_score=478	max_right=242	max_right_minus=62	max_right_plus=242	neg_log10_pos_hash_p_value=2.7	new_junction_coverage=0.12	new_junction_read_count=3	polymorphism_frequency=8.522e-02	pos_hash_score=3	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=1.41	side_1_overlap=4	side_1_possible_overlap_registers=243	side_1_read_count=36	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.15	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=29	side_2_redundant=0	total_non_overlap_reads=3
JC	337	.	NC_000913	1978502	-1	NC_000913	1979279	1	0	alignment_overlap=8	coverage_minus=7	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=235	key=NC_000913__1978502__-1__NC_000913__1979271__1__8____251__251__0__0	max_left=220	max_left_minus=210	max_left_plus=220	max_min_left=112	max_min_left_minus=112	max_min_left_plus=97	max_min_right=103	max_min_right_minus=103	max_min_right_plus=23	max_pos_hash_score=470	max_right=232	max_right_minus=232	max_right_plus=146	neg_log10_pos_hash_p_value=1.2	new_junction_coverage=0.40	new_junction_read_count=10	polymorphism_frequency=1.000e+00	pos_hash_score=9	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=8	side_1_possible_overlap_registers=243	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.00	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=0	side_2_redundant=0	total_non_overlap_reads=9
JC	338	.	NC_000913	1978503	1	NC_000913	2089842	1	0	alignment_overlap=1	coverage_minus=4	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__1978503__1__NC_000913__2089841__1__1____251__251__1__0	max_left=237	max_left_minus=190	max_left_plus=237	max_min_left=77	max_min_left_minus=77	max_min_left_plus=63	max_min_right=113	max_min_right_minus=96	max_min_right_plus=113	max_pos_hash_score=484	max_right=226	max_right_minus=214	max_right_plus=226	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.59	new_junction_read_count=15	polymorphism_frequency=9.352e-01	pos_hash_score=15	prediction=consensus	read_count_offset=9	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=1	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=233	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=15
JC	339	.	NC_000913	2089850	-1	NC_000913	3583428	1	0	alignment_overlap=1	coverage_minus=11	coverage_plus=11	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__2089851__-1__NC_000913__3583428__1__1____251__251__0__1	max_left=248	max_left_minus=248	max_left_plus=247	max_min_left=113	max_min_left_minus=92	max_min_left_plus=113	max_min_right=124	max_min_right_minus=95	max_min_right_plus=124	max_pos_hash_score=484	max_right=225	max_right_minus=225	max_right_plus=220	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.90	new_junction_read_count=23	polymorphism_frequency=1.000e+00	pos_hash_score=22	prediction=consensus	read_count_offset=9	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=233	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=22
JC	340	.	NC_000913	2102943	-1	NC_000913	2115039	1	0	alignment_overlap=0	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.667e-01	junction_possible_overlap_registers=243	key=NC_000913__2102943__-1__NC_000913__2115039__1__0____251__251__1__0	max_left=232	max_left_minus=232	max_left_plus=192	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=59	max_min_right_minus=59	max_min_right_plus=59	max_pos_hash_score=486	max_right=59	max_right_minus=59	max_right_plus=59	neg_log10_pos_hash_p_value=2.4	new_junction_coverage=0.16	new_junction_read_count=4	polymorphism_frequency=1.667e-01	pos_hash_score=4	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.78	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=20	side_2_redundant=0	total_non_overlap_reads=4
JC	341	.	NC_000913	2176844	1	NC_000913	4503515	-1	0	alignment_overlap=1	coverage_minus=14	coverage_plus=8	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__2176843__1__NC_000913__4503515__-1__1____251__251__0__0	max_left=227	max_left_minus=205	max_left_plus=227	max_min_left=117	max_min_left_minus=117	max_min_left_plus=100	max_min_right=123	max_min_right_minus=123	max_min_right_plus=120	max_pos_hash_score=484	max_right=249	max_right_minus=214	max_right_plus=249	neg_log10_pos_hash_p_value=0.3	new_junction_coverage=0.90	new_junction_read_count=23	polymorphism_frequency=8.789e-01	pos_hash_score=20	prediction=consensus	read_count_offset=13	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.12	side_1_overlap=0	side_1_possible_overlap_registers=229	side_1_read_count=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=1	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=0	total_non_overlap_reads=22
JC	342	.	NC_000913	2176856	-1	NC_000913	4502090	1	0	alignment_overlap=0	coverage_minus=10	coverage_plus=8	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__2176856__-1__NC_000913__4502090__1__0____251__251__0__0	max_left=233	max_left_minus=233	max_left_plus=183	max_min_left=85	max_min_left_minus=69	max_min_left_plus=85	max_min_right=95	max_min_right_minus=77	max_min_right_plus=95	max_pos_hash_score=486	max_right=237	max_right_minus=226	max_right_plus=237	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.70	new_junction_read_count=18	polymorphism_frequency=8.503e-01	pos_hash_score=18	prediction=consensus	read_count_offset=13	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.12	side_1_overlap=0	side_1_possible_overlap_registers=230	side_1_read_count=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=0	total_non_overlap_reads=18
JC	343	.	NC_000913	2238948	1	NC_000913	2514275	1	0	alignment_overlap=2	coverage_minus=6	coverage_plus=9	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=241	key=NC_000913__2238946__1__NC_000913__2514275__1__2____251__251__0__1	max_left=210	max_left_minus=210	max_left_plus=195	max_min_left=118	max_min_left_minus=78	max_min_left_plus=118	max_min_right=117	max_min_right_minus=60	max_min_right_plus=117	max_pos_hash_score=482	max_right=247	max_right_minus=247	max_right_plus=239	neg_log10_pos_hash_p_value=0.6	new_junction_coverage=0.59	new_junction_read_count=15	polymorphism_frequency=1.000e+00	pos_hash_score=15	prediction=consensus	read_count_offset=6	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=235	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=2	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=15
JC	344	.	NC_000913	2238953	-1	NC_000913	2515616	-1	0	alignment_overlap=3	coverage_minus=9	coverage_plus=9	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=240	key=NC_000913__2238956__-1__NC_000913__2515616__-1__3____251__251__0__1	max_left=231	max_left_minus=228	max_left_plus=231	max_min_left=116	max_min_left_minus=91	max_min_left_plus=116	max_min_right=117	max_min_right_minus=117	max_min_right_plus=71	max_pos_hash_score=480	max_right=237	max_right_minus=237	max_right_plus=208	neg_log10_pos_hash_p_value=0.4	new_junction_coverage=0.71	new_junction_read_count=18	polymorphism_frequency=1.000e+00	pos_hash_score=18	prediction=consensus	read_count_offset=6	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.00	side_1_overlap=0	side_1_possible_overlap_registers=234	side_1_read_count=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=3	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=18
JC	345	.	NC_000913	2290113	-1	NC_000913	2421265	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.250e-01	junction_possible_overlap_registers=243	key=NC_000913__2290113__-1__NC_000913__2421265__1__0____251__251__1__0	max_left=191	max_left_minus=148	max_left_plus=191	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=81	max_min_right_minus=81	max_min_right_plus=81	max_pos_hash_score=486	max_right=81	max_right_minus=81	max_right_plus=81	neg_log10_pos_hash_p_value=2.8	new_junction_coverage=0.12	new_junction_read_count=3	polymorphism_frequency=1.250e-01	pos_hash_score=3	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=0	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.82	side_2_overlap=0	side_2_possible_overlap_registers=243	side_2_read_count=21	side_2_redundant=0	total_non_overlap_reads=3
JC	346	.	NC_000913	2290113	-1	NC_000913	4215396	1	0	alignment_overlap=1	coverage_minus=3	coverage_plus=3	flanking_left=251	flanking_right=251	frequency=1.875e-01	junction_possible_overlap_registers=242	key=NC_000913__2290113__-1__NC_000913__4215395__1__1____251__251__1__0	max_left=191	max_left_minus=180	max_left_plus=191	max_min_left=101	max_min_left_minus=101	max_min_left_plus=36	max_min_right=121	max_min_right_minus=121	max_min_right_plus=59	max_pos_hash_score=484	max_right=215	max_right_minus=149	max_right_plus=215	neg_log10_pos_hash_p_value=1.9	new_junction_coverage=0.24	new_junction_read_count=6	polymorphism_frequency=1.875e-01	pos_hash_score=6	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=1	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.02	side_2_overlap=0	side_2_possible_overlap_registers=242	side_2_read_count=26	side_2_redundant=0	total_non_overlap_reads=6
JC	347	.	NC_000913	2558698	-1	NC_000913	2565489	1	0	alignment_overlap=8	coverage_minus=16	coverage_plus=8	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=235	key=NC_000913__2558698__-1__NC_000913__2565481__1__8____251__251__0__0	max_left=225	max_left_minus=225	max_left_plus=215	max_min_left=110	max_min_left_minus=110	max_min_left_plus=84	max_min_right=107	max_min_right_minus=107	max_min_right_plus=61	max_pos_hash_score=470	max_right=231	max_right_minus=212	max_right_plus=231	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.05	new_junction_read_count=26	polymorphism_frequency=9.302e-01	pos_hash_score=24	prediction=consensus	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.12	side_1_overlap=8	side_1_possible_overlap_registers=243	side_1_read_count=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.04	side_2_overlap=0	side_2_possible_overlap_registers=235	side_2_read_count=1	side_2_redundant=0	total_non_overlap_reads=24
JC	348	.	NC_000913	2818058	1	NC_000913	2818337	-1	0	alignment_overlap=20	coverage_minus=3	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=2.322e-01	junction_possible_overlap_registers=223	key=NC_000913__2818058__1__NC_000913__2818357__-1__20____251__251__0__0	max_left=224	max_left_minus=195	max_left_plus=224	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=88	max_min_right_minus=88	max_min_right_plus=24	max_pos_hash_score=446	max_right=88	max_right_minus=88	max_right_plus=24	neg_log10_pos_hash_p_value=1.9	new_junction_coverage=0.26	new_junction_read_count=6	polymorphism_frequency=2.322e-01	pos_hash_score=5	prediction=polymorphism	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.63	side_1_overlap=20	side_1_possible_overlap_registers=243	side_1_read_count=16	side_1_redundant=0	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=1.06	side_2_overlap=0	side_2_possible_overlap_registers=223	side_2_read_count=25	side_2_redundant=0	total_non_overlap_reads=5
JC	349	.	NC_000913	4038293	-1	NC_000913	4038754	1	0	alignment_overlap=5	coverage_minus=1	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=NA	junction_possible_overlap_registers=238	key=NC_000913__4038293__-1__NC_000913__4038749__1__5____251__251__1__1	max_left=28	max_left_minus=28	max_left_plus=28	max_min_left=28	max_min_left_minus=28	max_min_left_plus=28	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_pos_hash_score=476	max_right=242	max_right_minus=100	max_right_plus=242	neg_log10_pos_hash_p_value=2.7	new_junction_coverage=0.16	new_junction_read_count=4	polymorphism_frequency=NA	pos_hash_score=3	prediction=unknown	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=5	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=3
JC	350	.	NC_000913	4123617	1	NC_000913	4498181	1	0	alignment_overlap=0	coverage_minus=14	coverage_plus=10	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__4123617__1__NC_000913__4498181__1__0____251__251__0__1	max_left=241	max_left_minus=173	max_left_plus=241	max_min_left=96	max_min_left_minus=67	max_min_left_plus=96	max_min_right=114	max_min_right_minus=113	max_min_right_plus=114	max_pos_hash_score=486	max_right=228	max_right_minus=228	max_right_plus=213	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.94	new_junction_read_count=24	polymorphism_frequency=8.246e-01	pos_hash_score=22	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.20	side_1_overlap=0	side_1_possible_overlap_registers=238	side_1_read_count=5	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=24
JC	351	.	NC_000913	4123621	-1	NC_000913	4499511	-1	0	alignment_overlap=0	coverage_minus=10	coverage_plus=16	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=243	key=NC_000913__4123621__-1__NC_000913__4499511__-1__0____251__251__0__1	max_left=222	max_left_minus=188	max_left_plus=222	max_min_left=115	max_min_left_minus=115	max_min_left_plus=87	max_min_right=125	max_min_right_minus=79	max_min_right_plus=125	max_pos_hash_score=486	max_right=229	max_right_minus=226	max_right_plus=229	neg_log10_pos_hash_p_value=0.1	new_junction_coverage=1.02	new_junction_read_count=26	polymorphism_frequency=8.359e-01	pos_hash_score=26	prediction=consensus	read_count_offset=5	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.20	side_1_overlap=0	side_1_possible_overlap_registers=238	side_1_read_count=5	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=26
JC	352	.	NC_000913	4436762	1	NC_000913	4499511	-1	0	alignment_overlap=0	coverage_minus=2	coverage_plus=2	flanking_left=251	flanking_right=251	frequency=1.379e-01	junction_possible_overlap_registers=243	key=NC_000913__4436762__1__NC_000913__4499511__-1__0____251__251__0__1	max_left=164	max_left_minus=164	max_left_plus=54	max_min_left=54	max_min_left_minus=0	max_min_left_plus=54	max_min_right=111	max_min_right_minus=111	max_min_right_plus=0	max_pos_hash_score=486	max_right=224	max_right_minus=111	max_right_plus=224	neg_log10_pos_hash_p_value=2.4	new_junction_coverage=0.16	new_junction_read_count=4	polymorphism_frequency=1.379e-01	pos_hash_score=4	prediction=polymorphism	reject=FREQUENCY_CUTOFF	side_1_annotate_key=gene	side_1_continuation=0	side_1_coverage=0.98	side_1_overlap=0	side_1_possible_overlap_registers=243	side_1_read_count=25	side_1_redundant=0	side_2_annotate_key=repeat	side_2_continuation=0	side_2_coverage=NA	side_2_overlap=0	side_2_possible_overlap_registers=NA	side_2_read_count=NA	side_2_redundant=1	total_non_overlap_reads=4
JC	353	.	NC_000913	4507459	1	NC_000913	4640419	-1	0	alignment_overlap=2	coverage_minus=22	coverage_plus=17	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=241	key=NC_000913__4507459__1__NC_000913__4640421__-1__2____251__251__1__0	max_left=246	max_left_minus=245	max_left_plus=246	max_min_left=116	max_min_left_minus=116	max_min_left_plus=98	max_min_right=110	max_min_right_minus=110	max_min_right_plus=77	max_pos_hash_score=482	max_right=241	max_right_minus=234	max_right_plus=241	neg_log10_pos_hash_p_value=0.0	new_junction_coverage=1.54	new_junction_read_count=39	polymorphism_frequency=9.280e-01	pos_hash_score=37	prediction=consensus	read_count_offset=2	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=2	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.12	side_2_overlap=0	side_2_possible_overlap_registers=239	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=39
JC	354	.	NC_000913	4508679	-1	NC_000913	4640418	1	0	alignment_overlap=1	coverage_minus=9	coverage_plus=14	flanking_left=251	flanking_right=251	frequency=1	junction_possible_overlap_registers=242	key=NC_000913__4508679__-1__NC_000913__4640417__1__1____251__251__1__0	max_left=247	max_left_minus=241	max_left_plus=247	max_min_left=124	max_min_left_minus=124	max_min_left_plus=106	max_min_right=122	max_min_right_minus=56	max_min_right_plus=122	max_pos_hash_score=484	max_right=216	max_right_minus=214	max_right_plus=216	neg_log10_pos_hash_p_value=0.2	new_junction_coverage=0.98	new_junction_read_count=25	polymorphism_frequency=8.921e-01	pos_hash_score=23	prediction=consensus	read_count_offset=2	side_1_annotate_key=repeat	side_1_continuation=0	side_1_coverage=NA	side_1_overlap=1	side_1_read_count=NA	side_1_redundant=1	side_2_annotate_key=gene	side_2_continuation=0	side_2_coverage=0.12	side_2_overlap=0	side_2_possible_overlap_registers=240	side_2_read_count=3	side_2_redundant=0	total_non_overlap_reads=23
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UN	1846	.	NC_000913	2151653	2151654
UN	1847	.	NC_000913	2151656	2151656
UN	1848	.	NC_000913	2151658	2151658
UN	1849	.	NC_000913	2151681	2151684
UN	1850	.	NC_000913	2151686	2151686
UN	1851	.	NC_000913	2151689	2151691
UN	1852	.	NC_000913	2151694	2151695
UN	1853	.	NC_000913	2151697	2151697
UN	1854	.	NC_000913	2151702	2151702
UN	1855	.	NC_000913	2154342	2154342
UN	1856	.	NC_000913	2154364	2154364
UN	1857	.	NC_000913	2170325	2170325
UN	1858	.	NC_000913	2170327	2170327
UN	1859	.	NC_000913	2170329	2170329
UN	1860	.	NC_000913	2170332	2170332
UN	1861	.	NC_000913	2170334	2170335
UN	1862	.	NC_000913	2170337	2170338
UN	1863	.	NC_000913	2170340	2171243
UN	1864	.	NC_000913	2171245	2171247
UN	1865	.	NC_000913	2171249	2171263
UN	1866	.	NC_000913	2171265	2171265
UN	1867	.	NC_000913	2171272	2171272
UN	1868	.	NC_000913	2177146	2177146
UN	1869	.	NC_000913	2189878	2189878
UN	1870	.	NC_000913	2189881	2189881
UN	1871	.	NC_000913	2189886	2189886
UN	1872	.	NC_000913	2229190	2229190
UN	1873	.	NC_000913	2229205	2229205
UN	1874	.	NC_000913	2229208	2229208
UN	1875	.	NC_000913	2229246	2229246
UN	1876	.	NC_000913	2229255	2229255
UN	1877	.	NC_000913	2229257	2229257
UN	1878	.	NC_000913	2229259	2229259
UN	1879	.	NC_000913	2229269	2229271
UN	1880	.	NC_000913	2229293	2229293
UN	1881	.	NC_000913	2229297	2229297
UN	1882	.	NC_000913	2229318	2229318
UN	1883	.	NC_000913	2229328	2229328
UN	1884	.	NC_000913	2278730	2278730
UN	1885	.	NC_000913	2278760	2278760
UN	1886	.	NC_000913	2278766	2278767
UN	1887	.	NC_000913	2278775	2278775
UN	1888	.	NC_000913	2278797	2278797
UN	1889	.	NC_000913	2278801	2278801
UN	1890	.	NC_000913	2278814	2278815
UN	1891	.	NC_000913	2278817	2278817
UN	1892	.	NC_000913	2278819	2278821
UN	1893	.	NC_000913	2278825	2278826
UN	1894	.	NC_000913	2278836	2278839
UN	1895	.	NC_000913	2278850	2278851
UN	1896	.	NC_000913	2278857	2278858
UN	1897	.	NC_000913	2278862	2278863
UN	1898	.	NC_000913	2278870	2278871
UN	1899	.	NC_000913	2278875	2278875
UN	1900	.	NC_000913	2278890	2278890
UN	1901	.	NC_000913	2288730	2288730
UN	1902	.	NC_000913	2288734	2288735
UN	1903	.	NC_000913	2288737	2288738
UN	1904	.	NC_000913	2288742	2288743
UN	1905	.	NC_000913	2288747	2288782
UN	1906	.	NC_000913	2288784	2288784
UN	1907	.	NC_000913	2288787	2288789
UN	1908	.	NC_000913	2288792	2288794
UN	1909	.	NC_000913	2288810	2288810
UN	1910	.	NC_000913	2288812	2288812
UN	1911	.	NC_000913	2288821	2288821
UN	1912	.	NC_000913	2288829	2288830
UN	1913	.	NC_000913	2288837	2288837
UN	1914	.	NC_000913	2288862	2288862
UN	1915	.	NC_000913	2289039	2289039
UN	1916	.	NC_000913	2289071	2289072
UN	1917	.	NC_000913	2289082	2289082
UN	1918	.	NC_000913	2289084	2289087
UN	1919	.	NC_000913	2289089	2289927
UN	1920	.	NC_000913	2289929	2289933
UN	1921	.	NC_000913	2289937	2289939
UN	1922	.	NC_000913	2289941	2289942
UN	1923	.	NC_000913	2289951	2289954
UN	1924	.	NC_000913	2289956	2289957
UN	1925	.	NC_000913	2289960	2289960
UN	1926	.	NC_000913	2336594	2336594
UN	1927	.	NC_000913	2339771	2339771
UN	1928	.	NC_000913	2340745	2340745
UN	1929	.	NC_000913	2340763	2340763
UN	1930	.	NC_000913	2363806	2363806
UN	1931	.	NC_000913	2363812	2363812
UN	1932	.	NC_000913	2363815	2363815
UN	1933	.	NC_000913	2363820	2363820
UN	1934	.	NC_000913	2363823	2363823
UN	1935	.	NC_000913	2363852	2363852
UN	1936	.	NC_000913	2367321	2367321
UN	1937	.	NC_000913	2367329	2367331
UN	1938	.	NC_000913	2367333	2367333
UN	1939	.	NC_000913	2367335	2367336
UN	1940	.	NC_000913	2367339	2367340
UN	1941	.	NC_000913	2367342	2367348
UN	1942	.	NC_000913	2367350	2367351
UN	1943	.	NC_000913	2367353	2367354
UN	1944	.	NC_000913	2367356	2367367
UN	1945	.	NC_000913	2367370	2367376
UN	1946	.	NC_000913	2367378	2367380
UN	1947	.	NC_000913	2367382	2367382
UN	1948	.	NC_000913	2367385	2367385
UN	1949	.	NC_000913	2367387	2367388
UN	1950	.	NC_000913	2367390	2367390
UN	1951	.	NC_000913	2367392	2367392
UN	1952	.	NC_000913	2367395	2367395
UN	1953	.	NC_000913	2367398	2367399
UN	1954	.	NC_000913	2367405	2367405
UN	1955	.	NC_000913	2367407	2367408
UN	1956	.	NC_000913	2367410	2367411
UN	1957	.	NC_000913	2367413	2367413
UN	1958	.	NC_000913	2367419	2367419
UN	1959	.	NC_000913	2367421	2367421
UN	1960	.	NC_000913	2367423	2367424
UN	1961	.	NC_000913	2367427	2367427
UN	1962	.	NC_000913	2367429	2367429
UN	1963	.	NC_000913	2367431	2367437
UN	1964	.	NC_000913	2367440	2367441
UN	1965	.	NC_000913	2367445	2367446
UN	1966	.	NC_000913	2367448	2367449
UN	1967	.	NC_000913	2367453	2367453
UN	1968	.	NC_000913	2367455	2367455
UN	1969	.	NC_000913	2367457	2367458
UN	1970	.	NC_000913	2367485	2367485
UN	1971	.	NC_000913	2367504	2367504
UN	1972	.	NC_000913	2373533	2373533
UN	1973	.	NC_000913	2373537	2373537
UN	1974	.	NC_000913	2378952	2378952
UN	1975	.	NC_000913	2378955	2378955
UN	1976	.	NC_000913	2378957	2378962
UN	1977	.	NC_000913	2378968	2378968
UN	1978	.	NC_000913	2378970	2378972
UN	1979	.	NC_000913	2378974	2378974
UN	1980	.	NC_000913	2378976	2378978
UN	1981	.	NC_000913	2378981	2378981
UN	1982	.	NC_000913	2378983	2378984
UN	1983	.	NC_000913	2378986	2378987
UN	1984	.	NC_000913	2378989	2378989
UN	1985	.	NC_000913	2378991	2378993
UN	1986	.	NC_000913	2378995	2378995
UN	1987	.	NC_000913	2378997	2379012
UN	1988	.	NC_000913	2379015	2379016
UN	1989	.	NC_000913	2379018	2379018
UN	1990	.	NC_000913	2379021	2379021
UN	1991	.	NC_000913	2379025	2379026
UN	1992	.	NC_000913	2379028	2379030
UN	1993	.	NC_000913	2379034	2379036
UN	1994	.	NC_000913	2379038	2379038
UN	1995	.	NC_000913	2379042	2379042
UN	1996	.	NC_000913	2379045	2379045
UN	1997	.	NC_000913	2379056	2379056
UN	1998	.	NC_000913	2379062	2379062
UN	1999	.	NC_000913	2405669	2405669
UN	2000	.	NC_000913	2405675	2405675
UN	2001	.	NC_000913	2405702	2405702
UN	2002	.	NC_000913	2405746	2405746
UN	2003	.	NC_000913	2405748	2405749
UN	2004	.	NC_000913	2405751	2405753
UN	2005	.	NC_000913	2405755	2405755
UN	2006	.	NC_000913	2405759	2405761
UN	2007	.	NC_000913	2405763	2405763
UN	2008	.	NC_000913	2405800	2405800
UN	2009	.	NC_000913	2405875	2405875
UN	2010	.	NC_000913	2405878	2405878
UN	2011	.	NC_000913	2405880	2405880
UN	2012	.	NC_000913	2405885	2405885
UN	2013	.	NC_000913	2405887	2405887
UN	2014	.	NC_000913	2411912	2411912
UN	2015	.	NC_000913	2421436	2421436
UN	2016	.	NC_000913	2462910	2462910
UN	2017	.	NC_000913	2462915	2462915
UN	2018	.	NC_000913	2465629	2465629
UN	2019	.	NC_000913	2470401	2470401
UN	2020	.	NC_000913	2471429	2471429
UN	2021	.	NC_000913	2471432	2471432
UN	2022	.	NC_000913	2471448	2471451
UN	2023	.	NC_000913	2485080	2485080
UN	2024	.	NC_000913	2485087	2485087
UN	2025	.	NC_000913	2485106	2485106
UN	2026	.	NC_000913	2485109	2485109
UN	2027	.	NC_000913	2485120	2485120
UN	2028	.	NC_000913	2485122	2485128
UN	2029	.	NC_000913	2485131	2485134
UN	2030	.	NC_000913	2492127	2492127
UN	2031	.	NC_000913	2492132	2492132
UN	2032	.	NC_000913	2492139	2492139
UN	2033	.	NC_000913	2492141	2492141
UN	2034	.	NC_000913	2492145	2492150
UN	2035	.	NC_000913	2492152	2492161
UN	2036	.	NC_000913	2492163	2492165
UN	2037	.	NC_000913	2492168	2492177
UN	2038	.	NC_000913	2492179	2492179
UN	2039	.	NC_000913	2492182	2492182
UN	2040	.	NC_000913	2492184	2492184
UN	2041	.	NC_000913	2492186	2492193
UN	2042	.	NC_000913	2492202	2492202
UN	2043	.	NC_000913	2494557	2494557
UN	2044	.	NC_000913	2494566	2494567
UN	2045	.	NC_000913	2494576	2494576
UN	2046	.	NC_000913	2509647	2509647
UN	2047	.	NC_000913	2509867	2509867
UN	2048	.	NC_000913	2509875	2509875
UN	2049	.	NC_000913	2509880	2509880
UN	2050	.	NC_000913	2510583	2510583
UN	2051	.	NC_000913	2510586	2510586
UN	2052	.	NC_000913	2510613	2510613
UN	2053	.	NC_000913	2510615	2510615
UN	2054	.	NC_000913	2511304	2511304
UN	2055	.	NC_000913	2511310	2511310
UN	2056	.	NC_000913	2511312	2511312
UN	2057	.	NC_000913	2511317	2511317
UN	2058	.	NC_000913	2514467	2514467
UN	2059	.	NC_000913	2514470	2514473
UN	2060	.	NC_000913	2514475	2515456
UN	2061	.	NC_000913	2532279	2532279
UN	2062	.	NC_000913	2532289	2532289
UN	2063	.	NC_000913	2532310	2532310
UN	2064	.	NC_000913	2533659	2533659
UN	2065	.	NC_000913	2533661	2533662
UN	2066	.	NC_000913	2533664	2533664
UN	2067	.	NC_000913	2533666	2533667
UN	2068	.	NC_000913	2533669	2533671
UN	2069	.	NC_000913	2533675	2533685
UN	2070	.	NC_000913	2533687	2533688
UN	2071	.	NC_000913	2533690	2533693
UN	2072	.	NC_000913	2533695	2533696
UN	2073	.	NC_000913	2533698	2533702
UN	2074	.	NC_000913	2533713	2533714
UN	2075	.	NC_000913	2533735	2533735
UN	2076	.	NC_000913	2552276	2552276
UN	2077	.	NC_000913	2558699	2561196
UN	2078	.	NC_000913	2561202	2561202
UN	2079	.	NC_000913	2561205	2561206
UN	2080	.	NC_000913	2561208	2561208
UN	2081	.	NC_000913	2561212	2561215
UN	2082	.	NC_000913	2561217	2561217
UN	2083	.	NC_000913	2561219	2561220
UN	2084	.	NC_000913	2561224	2561225
UN	2085	.	NC_000913	2561227	2561228
UN	2086	.	NC_000913	2561231	2561232
UN	2087	.	NC_000913	2561234	2561237
UN	2088	.	NC_000913	2561240	2561241
UN	2089	.	NC_000913	2561243	2561243
UN	2090	.	NC_000913	2561254	2561255
UN	2091	.	NC_000913	2561422	2561424
UN	2092	.	NC_000913	2561428	2561428
UN	2093	.	NC_000913	2561432	2561432
UN	2094	.	NC_000913	2561436	2561436
UN	2095	.	NC_000913	2561441	2561465
UN	2096	.	NC_000913	2561468	2561469
UN	2097	.	NC_000913	2561474	2561474
UN	2098	.	NC_000913	2561477	2561477
UN	2099	.	NC_000913	2561479	2561479
UN	2100	.	NC_000913	2561492	2561492
UN	2101	.	NC_000913	2561494	2561494
UN	2102	.	NC_000913	2561499	2561499
UN	2103	.	NC_000913	2561501	2565488
UN	2104	.	NC_000913	2614733	2614733
UN	2105	.	NC_000913	2614741	2614741
UN	2106	.	NC_000913	2614743	2614744
UN	2107	.	NC_000913	2614747	2614747
UN	2108	.	NC_000913	2614751	2614751
UN	2109	.	NC_000913	2614753	2614753
UN	2110	.	NC_000913	2614757	2614757
UN	2111	.	NC_000913	2614759	2614759
UN	2112	.	NC_000913	2614763	2614763
UN	2113	.	NC_000913	2614767	2614767
UN	2114	.	NC_000913	2614790	2614790
UN	2115	.	NC_000913	2614794	2614794
UN	2116	.	NC_000913	2614840	2614840
UN	2117	.	NC_000913	2614842	2614842
UN	2118	.	NC_000913	2619751	2619751
UN	2119	.	NC_000913	2619775	2619775
UN	2120	.	NC_000913	2628993	2628993
UN	2121	.	NC_000913	2629003	2629003
UN	2122	.	NC_000913	2629033	2629033
UN	2123	.	NC_000913	2629074	2629074
UN	2124	.	NC_000913	2629076	2629076
UN	2125	.	NC_000913	2636082	2636082
UN	2126	.	NC_000913	2636088	2636088
UN	2127	.	NC_000913	2636095	2636096
UN	2128	.	NC_000913	2636099	2636099
UN	2129	.	NC_000913	2636101	2636110
UN	2130	.	NC_000913	2636112	2636112
UN	2131	.	NC_000913	2636114	2636114
UN	2132	.	NC_000913	2636116	2636116
UN	2133	.	NC_000913	2636118	2636130
UN	2134	.	NC_000913	2636132	2636134
UN	2135	.	NC_000913	2636136	2636157
UN	2136	.	NC_000913	2636159	2636204
UN	2137	.	NC_000913	2636206	2636206
UN	2138	.	NC_000913	2636208	2636209
UN	2139	.	NC_000913	2636212	2636216
UN	2140	.	NC_000913	2636224	2636225
UN	2141	.	NC_000913	2636227	2636233
UN	2142	.	NC_000913	2636235	2636235
UN	2143	.	NC_000913	2636237	2636239
UN	2144	.	NC_000913	2636245	2636245
UN	2145	.	NC_000913	2636247	2636247
UN	2146	.	NC_000913	2636251	2636251
UN	2147	.	NC_000913	2636253	2636254
UN	2148	.	NC_000913	2636256	2636256
UN	2149	.	NC_000913	2636258	2636260
UN	2150	.	NC_000913	2653716	2653716
UN	2151	.	NC_000913	2653740	2653740
UN	2152	.	NC_000913	2653749	2653749
UN	2153	.	NC_000913	2685798	2685798
UN	2154	.	NC_000913	2725493	2725493
UN	2155	.	NC_000913	2726232	2726233
UN	2156	.	NC_000913	2726238	2726239
UN	2157	.	NC_000913	2726242	2726242
UN	2158	.	NC_000913	2726245	2726245
UN	2159	.	NC_000913	2726249	2726249
UN	2160	.	NC_000913	2726252	2729043
UN	2161	.	NC_000913	2729054	2729054
UN	2162	.	NC_000913	2729058	2729058
UN	2163	.	NC_000913	2729060	2729060
UN	2164	.	NC_000913	2729071	2729071
UN	2165	.	NC_000913	2729774	2730782
UN	2166	.	NC_000913	2730786	2730786
UN	2167	.	NC_000913	2730795	2730795
UN	2168	.	NC_000913	2730815	2730815
UN	2169	.	NC_000913	2759946	2759946
UN	2170	.	NC_000913	2775879	2775879
UN	2171	.	NC_000913	2775882	2775882
UN	2172	.	NC_000913	2781310	2781310
UN	2173	.	NC_000913	2781322	2781322
UN	2174	.	NC_000913	2788600	2788600
UN	2175	.	NC_000913	2798930	2798930
UN	2176	.	NC_000913	2798933	2798933
UN	2177	.	NC_000913	2798943	2798966
UN	2178	.	NC_000913	2798977	2798978
UN	2179	.	NC_000913	2799004	2799004
UN	2180	.	NC_000913	2822707	2822708
UN	2181	.	NC_000913	2822711	2822711
UN	2182	.	NC_000913	2822713	2822715
UN	2183	.	NC_000913	2822717	2822718
UN	2184	.	NC_000913	2822726	2822726
UN	2185	.	NC_000913	2822730	2823004
UN	2186	.	NC_000913	2823006	2823008
UN	2187	.	NC_000913	2823011	2823011
UN	2188	.	NC_000913	2823013	2823013
UN	2189	.	NC_000913	2823015	2823018
UN	2190	.	NC_000913	2823022	2823022
UN	2191	.	NC_000913	2823024	2823025
UN	2192	.	NC_000913	2823027	2823027
UN	2193	.	NC_000913	2823029	2823030
UN	2194	.	NC_000913	2823033	2823034
UN	2195	.	NC_000913	2823036	2823037
UN	2196	.	NC_000913	2823043	2823043
UN	2197	.	NC_000913	2823045	2823045
UN	2198	.	NC_000913	2823134	2823134
UN	2199	.	NC_000913	2823140	2823140
UN	2200	.	NC_000913	2823142	2823142
UN	2201	.	NC_000913	2823144	2823144
UN	2202	.	NC_000913	2823146	2823146
UN	2203	.	NC_000913	2823160	2823160
UN	2204	.	NC_000913	2823162	2823162
UN	2205	.	NC_000913	2823165	2823165
UN	2206	.	NC_000913	2823171	2823171
UN	2207	.	NC_000913	2823177	2823178
UN	2208	.	NC_000913	2823183	2823183
UN	2209	.	NC_000913	2823190	2823198
UN	2210	.	NC_000913	2823200	2823480
UN	2211	.	NC_000913	2823482	2823498
UN	2212	.	NC_000913	2823500	2823510
UN	2213	.	NC_000913	2823512	2823512
UN	2214	.	NC_000913	2823514	2823525
UN	2215	.	NC_000913	2823527	2823531
UN	2216	.	NC_000913	2823533	2823548
UN	2217	.	NC_000913	2823550	2823554
UN	2218	.	NC_000913	2823557	2823567
UN	2219	.	NC_000913	2823569	2823570
UN	2220	.	NC_000913	2823573	2823581
UN	2221	.	NC_000913	2823583	2825018
UN	2222	.	NC_000913	2825024	2825024
UN	2223	.	NC_000913	2825028	2825028
UN	2224	.	NC_000913	2825030	2825031
UN	2225	.	NC_000913	2825033	2825035
UN	2226	.	NC_000913	2825042	2825043
UN	2227	.	NC_000913	2825048	2825051
UN	2228	.	NC_000913	2825061	2825061
UN	2229	.	NC_000913	2825094	2825095
UN	2230	.	NC_000913	2825098	2825105
UN	2231	.	NC_000913	2825107	2825141
UN	2232	.	NC_000913	2825143	2825151
UN	2233	.	NC_000913	2825154	2825156
UN	2234	.	NC_000913	2825158	2825162
UN	2235	.	NC_000913	2825166	2825168
UN	2236	.	NC_000913	2825172	2825172
UN	2237	.	NC_000913	2825174	2825174
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