|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ybdO
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybdO
Search strains by all related name:
ybdO b0603 ECK0597 JW0596
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybdO
|
|
Alternative name
|
b0603,ECK0597,JW0596
|
|
Location, Length
|
635,939 - 636,841
(
-
)
;
13.69
min
;
903
(bp) ,
300
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK0597:JW0596:b0603
|
|
Function
|
|
|
PID
|
4062220
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBDO_ECOLI
(
P77746
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator ybdO;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybdO; OrderedLocusNames=b0603, JW0596;
|
| Sequences |
Amino acid
FASTA format
|
0001 MANLYDLKKF DLNLLVIFEC IYQHLSISKA AESLYITPSA VSQSLQRLRA QFNDPLFIRS GKGIAPTTTG
0071 LNLHHHLEKN LRGLEQTINI VNKSELKKNF IIYGPQLISC SNNSMLIRCL RQDSSVEIEC HDILMSAENA
0141 EELLVHRKAD LVITQMPVIS RSVICMPLHT IRNTLICSNR HPRITDNSTY EQIMAEEFTQ LISKSAGVDD
0211 IQMEIDERFM NRKISFRGSS LLTIINSIAV TDLLGIVPYE LYNSYRDFLN LKEIKLEHPL PSIKLYISYN
0281 KSSLNNLVFS RFIDRLNESF
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tcctgagtta agcaaaaaaa cataatcaat
-070 aaaaatatat acgcaaaaaa cattgattaa gtgaatatat catggaagaa aaatataacc ggagtagtgt
0001 atggccaatc tctacgactt gaaaaagttc gacttaaatc ttcttgtcat atttgagtgt atttaccagc
0071 atttaagcat tagcaaagct gctgaatcac tatatatcac cccatcagcc gtgagccagt cgttacaacg
0141 cttacgtgcg caatttaatg accctttatt cattcgctca ggaaaaggta tcgcgccgac gacaacaggg
0211 ttaaatctgc atcaccatct tgagaaaaat ctcagaggcc ttgaacaaac aattaatata gtcaataagt
0281 ccgaactaaa gaaaaacttt attatctacg gccctcagct catttcttgc tctaataata gtatgctgat
0351 ccgctgccta cggcaagatt cctctgtcga gattgagtgc catgatatcc tcatgtcagc agagaatgct
0421 gaagaactgt tggttcaccg caaagccgat ctggtgatca cccaaatgcc agtgatcagc cgttccgtca
0491 tttgcatgcc attgcatacg attcgcaata ctctaatttg tagtaatagg catccacgaa ttactgacaa
0561 tagcacttat gaacaaatta tggcagaaga gttcacccaa ttaatatcta aatcagcagg ggttgatgat
0631 attcaaatgg aaatagacga gagatttatg aatcgcaaaa tctcatttcg tggttcctct ttgctgacaa
0701 tcattaatag cattgcagtt acagatttac tgggaatagt cccctatgaa ctttataatt cctaccgtga
0771 ctttcttaac ttaaaagaga taaaactaga acatccgtta ccttcaataa agctttacat ttcctataat
0841 aaatcttctt taaataattt ggtgttctcc cgatttattg accgtctaaa tgagagtttt tgatatataa
0911 ctacagacag ctactataac tttcatctat ttattcacag cgcgaatgaa aaataaaaca ctctgcttta
0981 cagtgtttac tttataatta aca
|
