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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yjiE
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
yjiE
Search strains by all related name:
yjiE b4327 ECK4318 f303 JW4290 qseD
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General information (Go to Linear View: )
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Gene Name
|
yjiE
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Alternative name
|
b4327,ECK4318,f303,JW4290,qseD
|
|
Location, Length
|
4,562,058 - 4,562,969
(
-
)
;
98.19
min
;
912
(bp) ,
303
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
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Note
|
ECK4318:JW4290:b4327
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Function
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PID
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85677070
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YJIE_ECOLI
(
P39376
;
Q2M5Y6
)
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- Protein name
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RecName: Full=Uncharacterized HTH-type transcriptional regulator yjiE;
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- Synonyms
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- Gene name
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Name=yjiE; OrderedLocusNames=b4327, JW4290;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
|
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nr
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BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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|
| Sequences |
Amino acid
FASTA format
|
0001 MDDCGAILHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR QVTPLQLSEQ
0071 GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII SQMPPLFTWA IEAIDVDEAV
0141 DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS DEHGEALFNL AQPHFPLLNY SRNSYMGRLI
0211 NRTLTRHSEL SFSTFFVSSM SELLKQVALD GCGIAWLPEY AIQQEIRSGK LVVLNRDELV IPIQAYAYRM
0281 NTRMNPVAER FWRELRELEI VLS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aaagcctgcg tgaaaggaac gtttgaaacg
-070 gcttaaacgg ttgtcagccg cccgaatgga cgtagaatgc ccgcaagggc ggctgacaga gtaaaacgta
0001 atggatgact gtggtgcgat tttgcataat attgaaacca aatggcttta tgattttctg accctggaaa
0071 aatgccgcaa tttttcccag gcggcagtca gtcgcaacgt ctcgcaaccg gcattcagcc gccgcatccg
0141 tgcgctggaa caggcgattg gtgttgaatt gtttaaccgc caggtaacgc cgctgcaact ctcagaacaa
0211 gggaaaatct tccattcgca gatccgccat ctgttgcaac agttagagag caatctggca gagctgcgtg
0281 gcggcagcga ttacgcgcaa cgaaaaatca agatagccgc tgcacactct ctttccctcg ggctgttacc
0351 gtccattatc agccagatgc cgccgctctt tacctgggca attgaagcta ttgatgtcga tgaagcggtc
0421 gataaactgc gtgaagggca aagtgactgt attttttcct ttcacgacga agatttgctg gaagcgccgt
0491 ttgaccacat tcgcttattt gaatctcaat tgttccctgt ctgcgccagt gacgaacacg gagaagcact
0561 ttttaacctc gcgcagccac actttccgtt actgaattac agccgcaact cctacatggg gcgattgatt
0631 aatcgcaccc tgacgcgcca cagtgagtta agtttcagca ccttttttgt ctcttcgatg agcgagcttt
0701 taaagcaggt tgccctcgac ggctgtggga ttgcctggct gccggagtac gccatccaac aagaaattcg
0771 cagcgggaag ctcgttgtac tgaatcggga cgaactggtg atcccgattc aggcctatgc ataccggatg
0841 aatacccgca tgaatcccgt tgccgaacgc ttctggcgtg aactgcgcga gctggagatt gtgcttagct
0911 gacattctcc agcgtcgcac tgcgccaacc gccattatcc cagaccagat caaacgttag cggttcatcg
0981 tcgtggtaca gcattatctc aaggctgatc gc
|
