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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yhjC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yhjC
Search strains by all related name:
yhjC b3521 ECK3506 JW3489
|
General information (Go to Linear View: )
|
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Gene Name
|
yhjC
|
|
Alternative name
|
b3521,ECK3506,JW3489
|
|
Location, Length
|
3,967,102 - 3,968,073
(
-
)
;
85.38
min
;
972
(bp) ,
323
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK3506:JW3489:b3521
|
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Function
|
|
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PID
|
85676523
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YHJC_ECOLI
(
P37641
;
Q2M7I3
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator yhjC;
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- Synonyms
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- Gene name
|
Name=yhjC; OrderedLocusNames=b3521, JW3489;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
|
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Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLEKTINNAI CALLFRCEQQ SVKEMDKIHA MQLFIKVAEL ESFSRAADFF ALPKGSVSRQ IQALEHQLGT
0071 QLLQRTTRRV KLTPEGMTYY QRAKDVLSNL SELDGLFQQD ATSISGKLRI DIPPGIAKSL LLPRLSEFLY
0141 LHPGIELELS SHDRPVDILH DGFDCVIRTG ALPEDGVIAR PLGKLTMVNC ASPHYLTRFG YPQSPDDLTS
0211 HAIVRYTPHL GVHPLGFEVA SVNGVQWFKS GGMLTVNSSE NYLTAGLAGL GIIQIPRIAV REALRAGRLI
0281 EVLPGYRAEP LSLSLVYPQR RELSRRVNLF MQWLAGVMKE YLD
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctgtttaagg ggattcacct ttctcagaaa
-070 gctattccgc ccttttcctg ctgagaaatc gccacattcg gcatgacaac attgtgaaac ccggcattag
0001 atgttagaaa aaacaataaa caatgcgata tgcgcgttac tgtttcgctg tgaacaacaa tcggtcaaag
0071 aaatggataa aattcacgca atgcagttgt tcatcaaagt cgcggagctg gaaagttttt cccgcgcagc
0141 ggatttcttt gctttgccaa agggaagtgt ttcgcgccag atacaggcac tggaacatca acttggcacc
0211 cagcttctcc agcgcaccac gcgacgggtc aaactcacgc cagaaggcat gacctattat caacgagcaa
0281 aagatgtgtt gagtaatctc agcgaactgg acggtctgtt tcaacaggat gccaccagta tcagcggtaa
0351 attacgcatc gacatcccgc caggaatcgc gaaaagcctg ttactgccgc gcctgtcgga atttctctat
0421 ctgcatccgg gaattgagct ggaactgagt agccatgacc gtccggtaga tattcttcat gatggttttg
0491 attgcgtgat acgcactggc gcgttaccgg aagatggcgt tatcgcccgt cccctcggca aactgaccat
0561 ggtcaactgt gccagtccgc actatctgac gcgctttggt tatccgcaaa gccccgatga tctgacttca
0631 cacgcaatag tgcgttatac accgcacctg ggtgtacatc cgttaggttt tgaggttgcc agcgttaatg
0701 gcgtccagtg gtttaagtct ggcggcatgt tgacggtaaa cagtagcgaa aactatctca ccgccggtct
0771 tgccggtctg gggattattc agatcccgcg cattgccgtg cgcgaagccc tgcgtgccgg gcggcttatt
0841 gaagtattac ctggctaccg tgccgagccg ctctcccttt cgctggttta tccgcagcgt cgggagcttt
0911 cccggcgtgt aaacctgttt atgcagtggc tggctggcgt aatgaaagag tacctggact gaccgactat
0981 actttttaag aatgaccacg acagaaggac aaaagagcgg atgacgcagg aaaacgagat caaacgtccc
1051 atccaggatc tggagcacga gc
|
